Prupe.8G220600_v2.0.a1

serine threonine protein phosphatase 2A regulatory subunit

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Forward (+)
20032075 .. 20038861
6787 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G220600.3

Sequence Viewer

Length: 1623 bp
ATGGATATAGACGCGGTTGTAGGGGATGTTGGTTCTTTCGATCCTGAGCTTTTACAGCTCCCGGAATTGTCTCCGTTTGCGCTTAAAGCTAGTCCCCAAATTGCCGAGGATTTGTACGCACAGTGGCTTTCGCTTCCTCAAACCGGTCGATTGGTGAAATCTCTAATTGACGATGCAACCGCAGGCATTCCCATCAATGCCCTTGGGAACTCTTCAAGTGCAAATGCTGCCGGGAGCAATTCATTACCTTCCATGTTTCAGGCTGGAAGTACACCCCCACTTTCACCGAGAAGTTCCTCTGGTTCTCCTCGCTTTTCAAAGCTGAAAACTAGTCCTTCTTCTCTGCGATCTCCGCTAAAAGTGGTTAGTGAACCAGTTCGAGAAGCCATTCCTCAGTTCTATTTTCAAAATGGCCGTCCACCACCAAAGGAACTTCAGGAGCATTGTCTTTCTAGAATTAATGACCTTTTCGGTGGTCATATGGATGGATTGCAACTTCACGAGTTTAAGTTGGTTACGAAGGAGTTATGCAAGCTACCAACATTTTTCTCTTCTGCTATCTTTAAAAAGATAGATACTAGCTGCAGCGGGATAGTGACCAGGGATGCATTCGTCAGATATTGGGTTGATGGCAATATGCTGACAATGGATACAGCAACTCAAATATTTAAAATTCTAAAGCAGTCTGATAGCAATTACCTTACTCAGGTAGACTTCAAACCCATTCTTCTAGAGCTTGTGGCAACCCATCCAGGGTTGGAATTTTTACATGGAACTCCTGAATTTCAAGAAAGATATGCTGAAACTGTAATATACAGAATATTTTACTACATAAATAGATCAGGAAACGGTCGCCTTACCCTCAGGGAGCTGAAACGAGGAAATCTAATTGCTGCCATGCAACATGCAGATGAGGAAGAGGACATTAACAAAGTTCTGAGGTACTTCTCTTATGAACATTTTTATGTTATATACTGCAAATTTTGGGAGCTGGACACGGACCATGATTTCTTGATTGACAAAGAGAACCTCATTAGATATGGTAACCATGCCCTTACCTACAGGATTGTTGATAGAGTATTTTCGCAGATTCCAAGAAAGTTTACTAGCAAGGTTGAAGGGAAGATGGGTTATGAGGATTTTGTTTACTTCATGCTGTCAGAGGAGGATAAGTCGTGTGAGCCTAGCCTTGAGTATTGGTTCAAATGTATAGATTTGGATGGAAATGGAGTCCTTACACCCAATGAGTTGCAGTTCTTTTATGAGGAGCAGCTGCATCGTATGGAATGCATGGCCCAAGAACCTGTTCTATTCGAGGATATTTTGTGCCAAATAGTTGACATGATTGCACCAGAGAGGGAAGATTATCTCACACTAGCTGACTTGAAAGGATGCAAACTTTCAGGAAATGTCTTCAATATCCTTTTCAACCTTAATAAGTTTATAGCTTTTGAAAGTCGTGATCCATTTCTTATTCGCCAGGAGCGTGAGGATCCAACTTTGACAGAGTGGGACCGCTTTGCACACAGAGAATATATAAGGCTGTCAATGGAAGAAGATGGTGAGAATGCCTCTAATGGAAGTGTAGAAGTATGGGATGAATCACTCGAGGCTCCTTTTTAA

Protein Analysis

541

Amino Acids

61.86

Weight (kDa)

4.89

Isoelectric Point (pI)

40.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccI GTMKAC 1 cut(s) 711
AccII CGCG 1 cut(s) 14
AciI CCGC 5 cut(s) 14, 180, 353, 588, 1516
AclWI GGATC 4 cut(s) 35, 1457, 1487, 1500
AcoI YGGCCR 1 cut(s) 412
AcsI RAATTY 4 cut(s) 672, 761, 782, 980
AcuI CTGAAG 1 cut(s) 419
AfaI GTAC 3 cut(s) 116, 271, 944
AfiI CCNNNNNNNGG 3 cut(s) 143, 706, 753
AgeI ACCGGT 1 cut(s) 143
AhlI ACTAGT 1 cut(s) 329
AjnI CCWGG 3 cut(s) 599, 751, 1479
AjuI GAANNNNNNNTTGG 2 cut(s) 1290, 1322
Alw26I GTCTC 1 cut(s) 75
AlwI GGATC 4 cut(s) 35, 1457, 1487, 1500
Ama87I CYCGRG 1 cut(s) 1607
AoxI GGCC 2 cut(s) 412, 1293
ApeKI GCWGC 6 cut(s) 227, 582, 585, 893, 1270, 1273
ApoI RAATTY 4 cut(s) 672, 761, 782, 980
ArsI GACNNNNNNTTYG 2 cut(s) 400, 432
AseI ATTAAT 1 cut(s) 459
AsiGI ACCGGT 1 cut(s) 143
Asp700I GAANNNNTTC 3 cut(s) 375, 387, 1305
AspLEI GCGC 1 cut(s) 82
AspS9I GGNCC 3 cut(s) 1000, 1294, 1513
AsuC2I CCSGG 2 cut(s) 62, 232
AsuHPI GGTGA 3 cut(s) 166, 276, 1574
AvaI CYCGRG 1 cut(s) 1607
AvaII GGWCC 2 cut(s) 1000, 1513
AxyI CCTNAGG 1 cut(s) 863
BamHI GGATCC 1 cut(s) 1492
BauI CACGAG 1 cut(s) 500
BbsI GAAGAC 1 cut(s) 1405
BbvI GCAGC 6 cut(s) 214, 569, 597, 880, 1260, 1282
BccI CCATC 7 cut(s) 200, 479, 623, 756, 1120, 1214, 1553
BceAI ACGGC 1 cut(s) 399
BcgI CGANNNNNNTGC 2 cut(s) 1259, 1293
BciT130I CCWGG 3 cut(s) 601, 753, 1481
BciVI GTATCC 1 cut(s) 643
BcnI CCSGG 2 cut(s) 62, 232
BcoDI GTCTC 1 cut(s) 75
BcuI ACTAGT 1 cut(s) 329
BfaI CTAG 8 cut(s) 90, 330, 453, 579, 731, 1107, 1185, 1376
BfmI CTRYAG 2 cut(s) 583, 1060
BfuI GTATCC 1 cut(s) 643
BisI GCNGC 6 cut(s) 228, 583, 586, 894, 1271, 1274
BlsI GCNGC 6 cut(s) 229, 584, 587, 895, 1272, 1275
Bme1390I CCNGG 5 cut(s) 62, 232, 601, 753, 1481
Bme18I GGWCC 2 cut(s) 1000, 1513
BmeT110I CYCGRG 1 cut(s) 1607
BmgT120I GGNCC 3 cut(s) 1000, 1294, 1513
BmiI GGNNCC 3 cut(s) 1494, 1514, 1614
BmrFI CCNGG 5 cut(s) 62, 232, 601, 753, 1481
BmsI GCATC 4 cut(s) 163, 595, 1285, 1382
BpiI GAAGAC 1 cut(s) 1405
BplI GAGNNNNNCTC 2 cut(s) 1556, 1588
Bpu10I CCTNAGC 1 cut(s) 45
BpuEI CTTGAG 1 cut(s) 1211
BpuMI CCSGG 2 cut(s) 62, 232
BsaJI CCNNGG 4 cut(s) 105, 202, 600, 752
BsaWI WCCGGW 1 cut(s) 143
BsaXI ACNNNNNCTCC 2 cut(s) 1157, 1187
Bsc4I CCNNNNNNNGG 3 cut(s) 143, 706, 753
Bse118I RCCGGY 1 cut(s) 143
Bse1I ACTGG 1 cut(s) 374
Bse21I CCTNAGG 1 cut(s) 863
BseBI CCWGG 3 cut(s) 601, 753, 1481
BseDI CCNNGG 4 cut(s) 105, 202, 600, 752
BseGI GGATG 7 cut(s) 31, 490, 610, 748, 1225, 1397, 1603
BseLI CCNNNNNNNGG 3 cut(s) 143, 706, 753
BseMII CTCAG 5 cut(s) 36, 407, 719, 877, 929
BseNI ACTGG 1 cut(s) 374
BseRI GAGGAG 3 cut(s) 297, 1178, 1280
BseXI GCAGC 6 cut(s) 214, 569, 597, 880, 1260, 1282
Bsh1236I CGCG 1 cut(s) 14
Bsh1285I CGRYCG 2 cut(s) 148, 853
BshFI GGCC 2 cut(s) 414, 1295
BshTI ACCGGT 1 cut(s) 143
BsiEI CGRYCG 2 cut(s) 148, 853
BsiHKCI CYCGRG 1 cut(s) 1607
BsiSI CCGG 3 cut(s) 62, 144, 231
BslFI GGGAC 2 cut(s) 78, 1526
BslI CCNNNNNNNGG 3 cut(s) 143, 706, 753
BsmAI GTCTC 1 cut(s) 75
BsmFI GGGAC 2 cut(s) 78, 1526
BsmI GAATGC 4 cut(s) 186, 608, 1292, 1573
BsnI GGCC 2 cut(s) 414, 1295
BsoBI CYCGRG 1 cut(s) 1607
Bsp143I GATC 5 cut(s) 40, 347, 839, 1462, 1492
BspACI CCGC 5 cut(s) 14, 180, 353, 588, 1516
BspANI GGCC 2 cut(s) 414, 1295
BspCNI CTCAG 5 cut(s) 37, 406, 718, 876, 930
BspFNI CGCG 1 cut(s) 14
BspLI GGNNCC 3 cut(s) 1494, 1514, 1614
BspMAI CTGCAG 1 cut(s) 587
BspPI GGATC 4 cut(s) 35, 1457, 1487, 1500
BsrFI RCCGGY 1 cut(s) 143
BsrI ACTGG 1 cut(s) 374
BssAI RCCGGY 1 cut(s) 143
BssECI CCNNGG 4 cut(s) 105, 202, 600, 752
BssMI GATC 5 cut(s) 40, 347, 839, 1462, 1492
BssSI CACGAG 1 cut(s) 500
BssT1I CCWWGG 1 cut(s) 202
Bst2BI CACGAG 1 cut(s) 500
Bst2UI CCWGG 3 cut(s) 601, 753, 1481
Bst4CI ACNGT 3 cut(s) 123, 808, 851
Bst6I CTCTTC 3 cut(s) 217, 556, 912
BstAPI GCANNNNNTGC 1 cut(s) 227
BstC8I GCNNGC 2 cut(s) 184, 533
BstDEI CTNAG 5 cut(s) 45, 393, 705, 863, 938
BstEII GGTNACC 1 cut(s) 1043
BstENI CCTNNNNNAGG 1 cut(s) 704
BstF5I GGATG 7 cut(s) 31, 490, 610, 748, 1225, 1397, 1603
BstFNI CGCG 1 cut(s) 14
BstHHI GCGC 1 cut(s) 82
BstKTI GATC 5 cut(s) 43, 350, 842, 1465, 1495
BstMAI GTCTC 1 cut(s) 75
BstMBI GATC 5 cut(s) 40, 347, 839, 1462, 1492
BstMCI CGRYCG 2 cut(s) 148, 853
BstMWI GCNNNNNNNGC 4 cut(s) 55, 86, 227, 352
BstNI CCWGG 3 cut(s) 601, 753, 1481
BstNSI RCATGY 1 cut(s) 908
BstPI GGTNACC 1 cut(s) 1043
BstSCI CCNGG 5 cut(s) 60, 230, 599, 751, 1479
BstSFI CTRYAG 2 cut(s) 583, 1060
BstUI CGCG 1 cut(s) 14
BstV1I GCAGC 6 cut(s) 214, 569, 597, 880, 1260, 1282
BstV2I GAAGAC 1 cut(s) 1405
BstX2I RGATCY 1 cut(s) 1492
BstYI RGATCY 1 cut(s) 1492
Bsu36I CCTNAGG 1 cut(s) 863
BsuI GTATCC 1 cut(s) 643
BsuRI GGCC 2 cut(s) 414, 1295
BtsCI GGATG 7 cut(s) 31, 490, 610, 748, 1225, 1397, 1603
BtsIMutI CAGTG 1 cut(s) 128
Cac8I GCNNGC 2 cut(s) 184, 533
CfoI GCGC 1 cut(s) 82
Cfr10I RCCGGY 1 cut(s) 143
Cfr13I GGNCC 3 cut(s) 1000, 1294, 1513
CseI GACGC 1 cut(s) 20
Csp6I GTAC 3 cut(s) 115, 270, 943
CspAI ACCGGT 1 cut(s) 143
CviAII CATG 9 cut(s) 253, 770, 898, 905, 1004, 1049, 1153, 1291, 1342
CviQI GTAC 3 cut(s) 115, 270, 943
DdeI CTNAG 5 cut(s) 45, 393, 705, 863, 938
DpnI GATC 5 cut(s) 42, 349, 841, 1464, 1494
DpnII GATC 5 cut(s) 40, 347, 839, 1462, 1492
DraI TTTAAA 2 cut(s) 565, 670
EaeI YGGCCR 1 cut(s) 412
Eam1104I CTCTTC 3 cut(s) 217, 556, 912
EarI CTCTTC 3 cut(s) 217, 556, 912
Eco130I CCWWGG 1 cut(s) 202
Eco47I GGWCC 2 cut(s) 1000, 1513
Eco57I CTGAAG 1 cut(s) 419
Eco81I CCTNAGG 1 cut(s) 863
Eco88I CYCGRG 1 cut(s) 1607
Eco91I GGTNACC 1 cut(s) 1043
EcoNI CCTNNNNNAGG 1 cut(s) 704
EcoO65I GGTNACC 1 cut(s) 1043
EcoRII CCWGG 3 cut(s) 599, 751, 1479
EcoT14I CCWWGG 1 cut(s) 202
EcoT22I ATGCAT 2 cut(s) 610, 1292
ErhI CCWWGG 1 cut(s) 202
FaeI CATG 9 cut(s) 256, 773, 901, 908, 1007, 1052, 1156, 1294, 1345
FaqI GGGAC 2 cut(s) 78, 1526
FatI CATG 9 cut(s) 252, 769, 897, 904, 1003, 1048, 1152, 1290, 1341
FauI CCCGC 1 cut(s) 581
FauNDI CATATG 1 cut(s) 480
FblI GTMKAC 1 cut(s) 711
Fnu4HI GCNGC 6 cut(s) 228, 583, 586, 894, 1271, 1274
FokI GGATG 7 cut(s) 38, 497, 617, 735, 1232, 1404, 1610
Fsp4HI GCNGC 6 cut(s) 228, 583, 586, 894, 1271, 1274
FspBI CTAG 8 cut(s) 90, 330, 453, 579, 731, 1107, 1185, 1376
GlaI GCGC 1 cut(s) 81
GluI GCNGC 6 cut(s) 228, 583, 586, 894, 1271, 1274
HaeIII GGCC 2 cut(s) 414, 1295
HapII CCGG 3 cut(s) 62, 144, 231
HgaI GACGC 1 cut(s) 20
HhaI GCGC 1 cut(s) 82
Hin1II CATG 9 cut(s) 256, 773, 901, 908, 1007, 1052, 1156, 1294, 1345
Hin6I GCGC 1 cut(s) 80
HinP1I GCGC 1 cut(s) 80
HincII GTYRAC 1 cut(s) 1339
HindII GTYRAC 1 cut(s) 1339
HinfI GANTC 3 cut(s) 1090, 1230, 1601
HpaII CCGG 3 cut(s) 62, 144, 231
HphI GGTGA 3 cut(s) 166, 276, 1574
Hpy166II GTNNAC 7 cut(s) 272, 371, 419, 712, 1104, 1147, 1339
Hpy188I TCNGA 4 cut(s) 617, 688, 939, 1162
Hpy8I GTNNAC 7 cut(s) 272, 371, 419, 712, 1104, 1147, 1339
HpyAV CCTTC 4 cut(s) 258, 345, 514, 1112
HpyCH4III ACNGT 3 cut(s) 123, 808, 851
HpyF10VI GCNNNNNNNGC 4 cut(s) 55, 86, 227, 352
HpyF3I CTNAG 5 cut(s) 45, 393, 705, 863, 938
Hsp92II CATG 9 cut(s) 256, 773, 901, 908, 1007, 1052, 1156, 1294, 1345
HspAI GCGC 1 cut(s) 80
Kzo9I GATC 5 cut(s) 40, 347, 839, 1462, 1492
LmnI GCTCC 8 cut(s) 63, 234, 439, 868, 988, 1267, 1483, 1618
Lsp1109I GCAGC 6 cut(s) 214, 569, 597, 880, 1260, 1282
LweI GCATC 4 cut(s) 163, 595, 1285, 1382
MaeI CTAG 8 cut(s) 90, 330, 453, 579, 731, 1107, 1185, 1376
MaeIII GTNAC 3 cut(s) 514, 595, 1043
MalI GATC 5 cut(s) 42, 349, 841, 1464, 1494
MboI GATC 5 cut(s) 40, 347, 839, 1462, 1492
MflI RGATCY 1 cut(s) 1492
MlyI GAGTC 1 cut(s) 1239
MmeI TCCRAC 2 cut(s) 738, 1520
Mph1103I ATGCAT 2 cut(s) 610, 1292
MroXI GAANNNNTTC 3 cut(s) 375, 387, 1305
MseI TTAA 8 cut(s) 84, 459, 507, 564, 669, 927, 1434, 1621
MslI CAYNNNNRTG 3 cut(s) 483, 909, 963
MspA1I CMGCKG 2 cut(s) 588, 1273
MspI CCGG 3 cut(s) 62, 144, 231
MspR9I CCNGG 5 cut(s) 62, 232, 601, 753, 1481
Mva1269I GAATGC 4 cut(s) 186, 608, 1292, 1573
MvaI CCWGG 3 cut(s) 601, 753, 1481
MvnI CGCG 1 cut(s) 14
MwoI GCNNNNNNNGC 4 cut(s) 55, 86, 227, 352
NciI CCSGG 2 cut(s) 62, 232
NdeI CATATG 1 cut(s) 480
NdeII GATC 5 cut(s) 40, 347, 839, 1462, 1492
NlaIII CATG 9 cut(s) 256, 773, 901, 908, 1007, 1052, 1156, 1294, 1345
NlaIV GGNNCC 3 cut(s) 1494, 1514, 1614
NmeAIII GCCGAG 1 cut(s) 130
NmuCI GTSAC 1 cut(s) 595
NsiI ATGCAT 2 cut(s) 610, 1292
NspI RCATGY 1 cut(s) 908
PaeR7I CTCGAG 1 cut(s) 1607
PcsI WCGNNNNNNNCGW 1 cut(s) 1483
PctI GAATGC 4 cut(s) 186, 608, 1292, 1573
PdmI GAANNNNTTC 3 cut(s) 375, 387, 1305
PfeI GAWTC 2 cut(s) 1090, 1601
PfoI TCCNGGA 1 cut(s) 60
PinAI ACCGGT 1 cut(s) 143
PkrI GCNGC 6 cut(s) 229, 584, 587, 895, 1272, 1275
PleI GAGTC 1 cut(s) 1238
PpsI GAGTC 1 cut(s) 1238
PshBI ATTAAT 1 cut(s) 459
Psp6I CCWGG 3 cut(s) 599, 751, 1479
PspEI GGTNACC 1 cut(s) 1043
PspGI CCWGG 3 cut(s) 599, 751, 1479
PspN4I GGNNCC 3 cut(s) 1494, 1514, 1614
PspPI GGNCC 3 cut(s) 1000, 1294, 1513
PspXI VCTCGAGB 1 cut(s) 1607
PstI CTGCAG 1 cut(s) 587
PsuI RGATCY 1 cut(s) 1492
PvuII CAGCTG 1 cut(s) 1273
RsaI GTAC 3 cut(s) 116, 271, 944
RsaNI GTAC 3 cut(s) 115, 270, 943
RseI CAYNNNNRTG 3 cut(s) 483, 909, 963
SaqAI TTAA 8 cut(s) 84, 459, 507, 564, 669, 927, 1434, 1621
SatI GCNGC 6 cut(s) 228, 583, 586, 894, 1271, 1274
Sau3AI GATC 5 cut(s) 40, 347, 839, 1462, 1492
Sau96I GGNCC 3 cut(s) 1000, 1294, 1513
SchI GAGTC 1 cut(s) 1239
ScrFI CCNGG 5 cut(s) 62, 232, 601, 753, 1481
SfaNI GCATC 4 cut(s) 163, 595, 1285, 1382
SfcI CTRYAG 2 cut(s) 583, 1060
Sfr274I CTCGAG 1 cut(s) 1607
SinI GGWCC 2 cut(s) 1000, 1513
SlaI CTCGAG 1 cut(s) 1607
SmiMI CAYNNNNRTG 3 cut(s) 483, 909, 963
SmlI CTYRAG 2 cut(s) 1190, 1607
SmoI CTYRAG 2 cut(s) 1190, 1607
SpeI ACTAGT 1 cut(s) 329
SsiI CCGC 5 cut(s) 14, 180, 353, 588, 1516
SspI AATATT 2 cut(s) 666, 822
SspMI CTAG 8 cut(s) 90, 330, 453, 579, 731, 1107, 1185, 1376
StyD4I CCNGG 5 cut(s) 60, 230, 599, 751, 1479
StyI CCWWGG 1 cut(s) 202
TaaI ACNGT 3 cut(s) 123, 808, 851
TaqI TCGA 5 cut(s) 39, 148, 379, 1314, 1608
TatI WGTACW 1 cut(s) 269
TfiI GAWTC 2 cut(s) 1090, 1601
Tru1I TTAA 8 cut(s) 84, 459, 507, 564, 669, 927, 1434, 1621
Tru9I TTAA 8 cut(s) 84, 459, 507, 564, 669, 927, 1434, 1621
TscAI CASTG 1 cut(s) 128
TseFI GTSAC 1 cut(s) 595
TseI GCWGC 6 cut(s) 227, 582, 585, 893, 1270, 1273
Tsp45I GTSAC 1 cut(s) 595
TspDTI ATGAA 4 cut(s) 231, 969, 1141, 1614
TspGWI ACGGA 2 cut(s) 63, 1013
TspRI CASTG 1 cut(s) 128
VpaK11BI GGWCC 2 cut(s) 1000, 1513
VspI ATTAAT 1 cut(s) 459
XagI CCTNNNNNAGG 1 cut(s) 704
XapI RAATTY 4 cut(s) 672, 761, 782, 980
XbaI TCTAGA 2 cut(s) 452, 730
XceI RCATGY 1 cut(s) 908
XhoI CTCGAG 1 cut(s) 1607
XmiI GTMKAC 1 cut(s) 711
XmnI GAANNNNTTC 3 cut(s) 375, 387, 1305
XspI CTAG 8 cut(s) 90, 330, 453, 579, 731, 1107, 1185, 1376
Zsp2I ATGCAT 2 cut(s) 610, 1292
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.