Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp08

Orthogroup ID

OG0003837

Physical Location & Seq

Genomic Coordinates Forward (+)

20286020 .. 20292755

Gene Structure 6736 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.8G225900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2304 bp

ATGGGGACGGATCGTTTGCTATTAGCGACGGTAGGACCGCCAATAAAGCGGCGAGCAGGGAAAAAGCTTTGGACTTTGGAGGAGATGGGTACTTCTGACTTGCACCATGTACTAAGAAGCCTCTGTTTCAATACGGAGTGGAACTACGCCATTTTCTGGAAACTCAAGTATCGAGCTCGAATGGTACTGACTTGGGAGGATGCTTACTATGACAACTGTGAGCAACATGATTCTTCTGAGAATAGGTGCTTCAATAAGACACTAGATAGATTGCACGACAGCCATTACTCACACGACCCCCTTGGGCTTGCTGTGGCAAAAATGTCGTATCATGTATATACTCTGGGAGAGGGGATTGTTGGACAAGTGGCGGTTACCAGGAAGCATCAGTGGATTTTTGCTGATAATCTATTTAAGAATAACTGTTCACCATTTCAGTACTGTGATGGGTGGCAAAGTCAATTTTCAGCTGGCATAAGGACCATTGTCGTTGTGGCTGTTCCACATGGAGTTGTACAGCTTGGTTCTTTAAATAAAGTCATTGAAAATGTGAAGCTGGTATCTGAAATAAGAGATGTTTTTAGTACGCTTCAAGATTCCCCAGTAGAGCAGATCCGTAATCCATTGCAATCTGGCATAAACAGTTCAGCATGCTTGACAAGTATATCTCCTAAAGGTTTGGCTTCAGGGGTTATTACTGATTGCCTACATAATTTAGATAAAGCCGCAAACAGAGAAGAAAGCCCAGATGTTTGGTCGTCCATTTTCCCACATATTGGGAAAGACAGTGATAGTTCTTACGTTTTTCCACTGCCTGAAAATTGTCTGAAAAAGGCAGTTGAACTGGCCAATAAGCATGGAGGACTTGAGTCATCTAACTTAGGGTGTCTTGAGAGTGCCAAACTACATCAGTCAAAATCAAGTATCTTAAATTCAGAGCATTGCAAACTAGTAGGTGTGGAATTACTTGATAGGACGAAGTGTAAAGGGGAGAGTAGTGGCTGCAAAGATACTAGGATGGCTTCAATGATCTATTCCAATCCATTATCACATGGATCTGTTCAAGAAAATGTTAATTTATGTGATTCTGCAGACTTATCTGCAACATTTCTCAACTCTGCTGCACATGGCAGGGTTAATGTGGACAGGGTAGATTTTTACCAAAATGAGGTGTTGCAAGTAAGTGAACCCTCAGATGTTAAGTTTCAGAAGGACCTGGAAAACTTGGACTTTCAAACTGAATCAGGTCACATGGACACATCTAGTACATCTATGGCGTTCCCTGCTGGCTGTGAGCTGCATGAAGCACTTGGGCCAGCTTTTCTGAATAAGGGTAATTATTTTGATTGGGAAGCAGAGAAGAATGGAGATGGAATTACTATTGAGATGCCTGAGGGGATGAAAACTGGCCAGTTGACATCTGATTCTTGCCAAGAGCATCTTCTTGAAGCAGTGGTGGCCAATGTTTGCCACAGTGGCACTGATGTTAAAAGTGAAAAATCATTCTGTAAATCAATGCAGTCTCTGTTGACAACTGAAAAGTATCCAGAGCCTTCTAGTCATACTACACATACAATTGATTCAGAAAATTATTCCATTGATCAGCCCTCTCTTATAGCAGAGGACACACAACAATGCTTGAGCTCATCAGGGGTATGTGGGGTGATATCCCCCAAGTGGTTTTCCTCGCCTTGTCCTAGTGCTTGTAGTGAGCAGCTGGAGAGGTCTTCTGGACCATCTAAAAACAACAAGAAGAGGGCTAGACCTGGGGAGAATTCTAGGCCTAGGCCAAGGGACAGGCAATTGATCCAAGATCGTATCAAGGAGCTGCGGGAGCTAATACCTAATGGAGCAAAGTGTAGTATTGATTCACTGCTGGAGCGTACAATCAAGCACATGCTCTTTCTACAAAGCATCACTAAGCATGCAGACAAACTTAATAAGTGTGCTGATGCAAAGGAAGCAAGCATGTTGGGATCCTCTAATTATGAACGGGGATCAAGCTGGGCAGTGGAGGTGGGAGGCAATCTGAAAGTTTGTTCAATAATGGTAGAGAACCTCAACAAGAATGGGCAGATGGTTGTAGAGATGATGTGCGAAGAATGCAGTCATTTTCTTGAGATAGCAGAAGCTATCAGAAGCTTGGGTCTGACAATCTTAAAAGGTGTAACAGAAGCCCGTAGTGACAAGACATGGATATGTTTTGTGGTTGAGGGGCAGAACAACAGAAGCATACACAGAATGGATATCTTGTGGTCCCTTGTTCAAATATTGCAGCCCAAGAACCCTATGCAACAGCTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

768

Amino Acids

85.27

Weight (kDa)

5.98

Isoelectric Point (pI)

47.84

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06150 AT1G06150 AT2G31280 AT2G31280 AT2G31280
fragaria_vesca	FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810
malus_domestica	MD05G1200100.v1.1 MD10G1186300.v1.1
prunus_persica	Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1
pyrus_communis	pycom05g18670 pycom10g16110 pycom10g16120
rosa_chinensis	RchiOBHm_Chr6g0288541
rosa_laevigata	RLG00000012390
rosa_multiflora	Rmu_sc0002058.1_g000016
rosa_roxburghii	Rroxscaffold_7G00180000
rosa_rugosa	Rorug06G0196800 Rorug06G0196900
rosa_samantha	Rh6AG308800 Rh6BG314200 Rh6CG321500 Rh6DG307300
rosa_wichuraiana	Rw6G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	156, 776
AciI	CCGC	5 cut(s)	38, 49, 371, 726, 1831
AclWI	GGATC	7 cut(s)	18, 607, 1063, 1801, 1971, 1984, 2005
AcoI	YGGCCR	3 cut(s)	846, 1408, 1458
AcsI	RAATTY	2 cut(s)	931, 1774
AcuI	CTGAAG	1 cut(s)	669
AfaI	GTAC	8 cut(s)	91, 111, 186, 440, 516, 586, 1267, 1885
AfiI	CCNNNNNNNGG	4 cut(s)	156, 776, 1168, 1677
AhlI	ACTAGT	1 cut(s)	949
AjnI	CCWGG	3 cut(s)	377, 1215, 1765
AjuI	GAANNNNNNNTTGG	2 cut(s)	1425, 1457
Alw21I	GWGCWC	2 cut(s)	178, 1646
Alw26I	GTCTC	1 cut(s)	1527
AlwI	GGATC	7 cut(s)	18, 607, 1063, 1801, 1971, 1984, 2005
AlwNI	CAGNNNCTG	1 cut(s)	1525
AoxI	GGCC	6 cut(s)	846, 1313, 1408, 1458, 1781, 1787
ApeKI	GCWGC	6 cut(s)	1002, 1121, 1297, 1714, 1828, 2275
ApoI	RAATTY	2 cut(s)	931, 1774
ArsI	GACNNNNNNTTYG	1 cut(s)	30
AspA2I	CCTAGG	1 cut(s)	1784
AspS9I	GGNCC	6 cut(s)	35, 480, 1213, 1313, 1733, 2256
AsuHPI	GGTGA	2 cut(s)	420, 1675
AvaII	GGWCC	5 cut(s)	35, 480, 1213, 1733, 2256
AvrII	CCTAGG	1 cut(s)	1784
AxyI	CCTNAGG	1 cut(s)	1392
BaeI	ACNNNNGTAYC	2 cut(s)	152, 185
BalI	TGGCCA	3 cut(s)	848, 1410, 1460
BamHI	GGATCC	1 cut(s)	1976
BanII	GRGCYC	2 cut(s)	178, 1646
BbsI	GAAGAC	1 cut(s)	1719
Bbv12I	GWGCWC	2 cut(s)	178, 1646
BbvI	GCAGC	6 cut(s)	989, 1108, 1284, 1726, 1815, 2287
BccI	CCATC	6 cut(s)	79, 440, 1012, 1364, 1744, 2071
BcgI	CGANNNNNNTGC	2 cut(s)	306, 340
BciT130I	CCWGG	3 cut(s)	379, 1217, 1767
BciVI	GTATCC	1 cut(s)	1554
BclI	TGATCA	1 cut(s)	1600
BcoDI	GTCTC	1 cut(s)	1527
BcuI	ACTAGT	1 cut(s)	949
BfaI	CTAG	9 cut(s)	263, 950, 1014, 1263, 1557, 1698, 1761, 1779, 1785
BfmI	CTRYAG	2 cut(s)	1089, 2300
BfuI	GTATCC	1 cut(s)	1554
BglI	GCCNNNNNGGC	1 cut(s)	1476
BisI	GCNGC	8 cut(s)	50, 726, 1003, 1122, 1298, 1715, 1829, 2276
BlnI	CCTAGG	1 cut(s)	1784
BlsI	GCNGC	8 cut(s)	51, 727, 1004, 1123, 1299, 1716, 1830, 2277
BmcAI	AGTACT	1 cut(s)	440
Bme1390I	CCNGG	3 cut(s)	379, 1217, 1767
Bme18I	GGWCC	5 cut(s)	35, 480, 1213, 1733, 2256
BmgT120I	GGNCC	6 cut(s)	35, 480, 1213, 1313, 1733, 2256
BmiI	GGNNCC	2 cut(s)	1978, 2258
BmrFI	CCNGG	3 cut(s)	379, 1217, 1767
BmrI	ACTGGG	1 cut(s)	596
BmsI	GCATC	6 cut(s)	190, 394, 1377, 1447, 1923, 1942
BmuI	ACTGGG	1 cut(s)	596
BoxI	GACNNNNGTC	2 cut(s)	485, 868
BpiI	GAAGAC	1 cut(s)	1719
BpmI	CTGGAG	2 cut(s)	1739, 1898
BpuEI	CTTGAG	5 cut(s)	149, 887, 911, 1660, 2138
BsaJI	CCNNGG	4 cut(s)	301, 1766, 1784, 1790
Bsc4I	CCNNNNNNNGG	4 cut(s)	156, 776, 1168, 1677
Bse1I	ACTGG	4 cut(s)	602, 849, 1411, 1411
Bse21I	CCTNAGG	1 cut(s)	1392
Bse3DI	GCAATG	2 cut(s)	623, 940
BseBI	CCWGG	3 cut(s)	379, 1217, 1767
BseDI	CCNNGG	4 cut(s)	301, 1766, 1784, 1790
BseGI	GGATG	3 cut(s)	205, 1023, 1404
BseLI	CCNNNNNNNGG	4 cut(s)	156, 776, 1168, 1677
BseMI	GCAATG	2 cut(s)	623, 940
BseMII	CTCAG	3 cut(s)	228, 1206, 1383
BseNI	ACTGG	4 cut(s)	602, 849, 1411, 1411
BseRI	GAGGAG	1 cut(s)	95
BseXI	GCAGC	6 cut(s)	989, 1108, 1284, 1726, 1815, 2287
BseYI	CCCAGC	1 cut(s)	2004
BsgI	GTGCAG	1 cut(s)	1107
BshFI	GGCC	6 cut(s)	848, 1315, 1410, 1460, 1783, 1789
BsiHKAI	GWGCWC	2 cut(s)	178, 1646
BslFI	GGGAC	3 cut(s)	19, 1808, 2242
BslI	CCNNNNNNNGG	4 cut(s)	156, 776, 1168, 1677
BsmAI	GTCTC	1 cut(s)	1527
BsmFI	GGGAC	3 cut(s)	19, 1808, 2242
BsmI	GAATGC	1 cut(s)	2108
BsnI	GGCC	6 cut(s)	848, 1315, 1410, 1460, 1783, 1789
Bsp1286I	GDGCHC	2 cut(s)	178, 1646
Bsp1407I	TGTACA	1 cut(s)	514
Bsp143I	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
BspACI	CCGC	5 cut(s)	38, 49, 371, 726, 1831
BspANI	GGCC	6 cut(s)	848, 1315, 1410, 1460, 1783, 1789
BspCNI	CTCAG	3 cut(s)	229, 1205, 1384
BspLI	GGNNCC	2 cut(s)	1978, 2258
BspMAI	CTGCAG	1 cut(s)	1093
BspPI	GGATC	7 cut(s)	18, 607, 1063, 1801, 1971, 1984, 2005
BsrDI	GCAATG	2 cut(s)	623, 940
BsrGI	TGTACA	1 cut(s)	514
BsrI	ACTGG	4 cut(s)	602, 849, 1411, 1411
BssECI	CCNNGG	4 cut(s)	301, 1766, 1784, 1790
BssMI	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
BssT1I	CCWWGG	3 cut(s)	301, 1784, 1790
Bst2UI	CCWGG	3 cut(s)	379, 1217, 1767
Bst4CI	ACNGT	7 cut(s)	31, 218, 425, 443, 644, 788, 1475
Bst6I	CTCTTC	1 cut(s)	1748
BstAUI	TGTACA	1 cut(s)	514
BstC8I	GCNNGC	8 cut(s)	54, 309, 472, 652, 1288, 1317, 1926, 1966
BstDEI	CTNAG	6 cut(s)	113, 237, 880, 1192, 1392, 1920
BstEII	GGTNACC	1 cut(s)	373
BstF5I	GGATG	3 cut(s)	205, 1023, 1404
BstKTI	GATC	9 cut(s)	13, 615, 1032, 1058, 1603, 1809, 1816, 1979, 2000
BstMAI	GTCTC	1 cut(s)	1527
BstMBI	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
BstMWI	GCNNNNNNNGC	7 cut(s)	46, 1283, 1457, 1476, 1834, 1961, 2103
BstNI	CCWGG	3 cut(s)	379, 1217, 1767
BstNSI	RCATGY	4 cut(s)	654, 1900, 1928, 1972
BstPAI	GACNNNNGTC	2 cut(s)	485, 868
BstPI	GGTNACC	1 cut(s)	373
BstSCI	CCNGG	3 cut(s)	377, 1215, 1765
BstSFI	CTRYAG	2 cut(s)	1089, 2300
BstV1I	GCAGC	6 cut(s)	989, 1108, 1284, 1726, 1815, 2287
BstV2I	GAAGAC	1 cut(s)	1719
BstX2I	RGATCY	3 cut(s)	612, 1055, 1976
BstXI	CCANNNNNNTGG	1 cut(s)	753
BstYI	RGATCY	3 cut(s)	612, 1055, 1976
Bsu36I	CCTNAGG	1 cut(s)	1392
BsuI	GTATCC	1 cut(s)	1554
BsuRI	GGCC	6 cut(s)	848, 1315, 1410, 1460, 1783, 1789
BtsCI	GGATG	3 cut(s)	205, 1023, 1404
BtsI	GCAGTG	4 cut(s)	809, 1458, 1871, 2016
BtsIMutI	CAGTG	8 cut(s)	395, 793, 809, 1458, 1479, 1480, 1871, 2016
Cac8I	GCNNGC	8 cut(s)	54, 309, 472, 652, 1288, 1317, 1926, 1966
CaiI	CAGNNNCTG	1 cut(s)	1525
Cfr13I	GGNCC	6 cut(s)	35, 480, 1213, 1313, 1733, 2256
Csp6I	GTAC	8 cut(s)	90, 110, 185, 439, 515, 585, 1266, 1884
CviQI	GTAC	8 cut(s)	90, 110, 185, 439, 515, 585, 1266, 1884
DdeI	CTNAG	6 cut(s)	113, 237, 880, 1192, 1392, 1920
DpnI	GATC	9 cut(s)	12, 614, 1031, 1057, 1602, 1808, 1815, 1978, 1999
DpnII	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
DraI	TTTAAA	1 cut(s)	531
EaeI	YGGCCR	3 cut(s)	846, 1408, 1458
Eam1104I	CTCTTC	1 cut(s)	1748
EarI	CTCTTC	1 cut(s)	1748
Ecl136II	GAGCTC	2 cut(s)	176, 1644
Eco130I	CCWWGG	3 cut(s)	301, 1784, 1790
Eco147I	AGGCCT	1 cut(s)	1783
Eco24I	GRGCYC	2 cut(s)	178, 1646
Eco32I	GATATC	2 cut(s)	1668, 2248
Eco47I	GGWCC	5 cut(s)	35, 480, 1213, 1733, 2256
Eco53kI	GAGCTC	2 cut(s)	176, 1644
Eco57I	CTGAAG	1 cut(s)	669
Eco81I	CCTNAGG	1 cut(s)	1392
Eco91I	GGTNACC	1 cut(s)	373
EcoICRI	GAGCTC	2 cut(s)	176, 1644
EcoO109I	RGGNCCY	1 cut(s)	1213
EcoO65I	GGTNACC	1 cut(s)	373
EcoRI	GAATTC	1 cut(s)	1774
EcoRII	CCWGG	3 cut(s)	377, 1215, 1765
EcoRV	GATATC	2 cut(s)	1668, 2248
EcoT14I	CCWWGG	3 cut(s)	301, 1784, 1790
EcoT38I	GRGCYC	2 cut(s)	178, 1646
ErhI	CCWWGG	3 cut(s)	301, 1784, 1790
FalI	AAGNNNNNCTT	2 cut(s)	1425, 1457
FaqI	GGGAC	3 cut(s)	19, 1808, 2242
FauI	CCCGC	1 cut(s)	1824
FbaI	TGATCA	1 cut(s)	1600
Fnu4HI	GCNGC	8 cut(s)	50, 726, 1003, 1122, 1298, 1715, 1829, 2276
FokI	GGATG	3 cut(s)	212, 1030, 1411
FriOI	GRGCYC	2 cut(s)	178, 1646
Fsp4HI	GCNGC	8 cut(s)	50, 726, 1003, 1122, 1298, 1715, 1829, 2276
FspBI	CTAG	9 cut(s)	263, 950, 1014, 1263, 1557, 1698, 1761, 1779, 1785
GluI	GCNGC	8 cut(s)	50, 726, 1003, 1122, 1298, 1715, 1829, 2276
GsaI	CCCAGC	1 cut(s)	2008
GsuI	CTGGAG	2 cut(s)	1739, 1898
HaeIII	GGCC	6 cut(s)	848, 1315, 1410, 1460, 1783, 1789
HincII	GTYRAC	2 cut(s)	1416, 1530
HindII	GTYRAC	2 cut(s)	1416, 1530
HindIII	AAGCTT	2 cut(s)	65, 2140
HinfI	GANTC	8 cut(s)	230, 596, 869, 1085, 1241, 1424, 1580, 1868
HphI	GGTGA	2 cut(s)	420, 1675
Hpy166II	GTNNAC	5 cut(s)	428, 1144, 1187, 1416, 1530
Hpy188III	TCNNGA	8 cut(s)	157, 593, 890, 1064, 1445, 1547, 1731, 2117
Hpy8I	GTNNAC	5 cut(s)	428, 1144, 1187, 1416, 1530
Hpy99I	CGWCG	1 cut(s)	31
HpyAV	CCTTC	2 cut(s)	1204, 1563
HpyCH4III	ACNGT	7 cut(s)	31, 218, 425, 443, 644, 788, 1475
HpyCH4IV	ACGT	1 cut(s)	801
HpyF10VI	GCNNNNNNNGC	7 cut(s)	46, 1283, 1457, 1476, 1834, 1961, 2103
HpyF3I	CTNAG	6 cut(s)	113, 237, 880, 1192, 1392, 1920
HpySE526I	ACGT	1 cut(s)	801
Ksp22I	TGATCA	1 cut(s)	1600
Kzo9I	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
LmnI	GCTCC	4 cut(s)	1825, 1834, 1850, 1879
Lsp1109I	GCAGC	6 cut(s)	989, 1108, 1284, 1726, 1815, 2287
LweI	GCATC	6 cut(s)	190, 394, 1377, 1447, 1923, 1942
MaeI	CTAG	9 cut(s)	263, 950, 1014, 1263, 1557, 1698, 1761, 1779, 1785
MaeII	ACGT	1 cut(s)	801
MaeIII	GTNAC	4 cut(s)	373, 1247, 2167, 2183
MalI	GATC	9 cut(s)	12, 614, 1031, 1057, 1602, 1808, 1815, 1978, 1999
MboI	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
MboII	GAAGA	7 cut(s)	225, 749, 1372, 1433, 1719, 1765, 2111
MfeI	CAATTG	2 cut(s)	1575, 1802
MflI	RGATCY	3 cut(s)	612, 1055, 1976
MhlI	GDGCHC	2 cut(s)	178, 1646
MlsI	TGGCCA	3 cut(s)	848, 1410, 1460
MluNI	TGGCCA	3 cut(s)	848, 1410, 1460
MlyI	GAGTC	1 cut(s)	878
MmeI	TCCRAC	1 cut(s)	340
Mox20I	TGGCCA	3 cut(s)	848, 1410, 1460
MscI	TGGCCA	3 cut(s)	848, 1410, 1460
MseI	TTAA	9 cut(s)	414, 530, 929, 1074, 1137, 1200, 1488, 1938, 2159
MslI	CAYNNNNRTG	2 cut(s)	1633, 2197
Msp20I	TGGCCA	3 cut(s)	848, 1410, 1460
MspA1I	CMGCKG	2 cut(s)	470, 1717
MspR9I	CCNGG	3 cut(s)	379, 1217, 1767
MunI	CAATTG	2 cut(s)	1575, 1802
Mva1269I	GAATGC	1 cut(s)	2108
MvaI	CCWGG	3 cut(s)	379, 1217, 1767
MwoI	GCNNNNNNNGC	7 cut(s)	46, 1283, 1457, 1476, 1834, 1961, 2103
NdeII	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
NlaIV	GGNNCC	2 cut(s)	1978, 2258
NmuCI	GTSAC	2 cut(s)	1247, 2183
NspI	RCATGY	4 cut(s)	654, 1900, 1928, 1972
PaeI	GCATGC	2 cut(s)	654, 1928
PceI	AGGCCT	1 cut(s)	1783
PctI	GAATGC	1 cut(s)	2108
PfeI	GAWTC	7 cut(s)	230, 596, 1085, 1241, 1424, 1580, 1868
PflMI	CCANNNNNTGG	2 cut(s)	156, 776
PkrI	GCNGC	8 cut(s)	51, 727, 1004, 1123, 1299, 1716, 1830, 2277
PleI	GAGTC	1 cut(s)	877
PpsI	GAGTC	1 cut(s)	877
PpuMI	RGGWCCY	1 cut(s)	1213
PshAI	GACNNNNGTC	2 cut(s)	485, 868
Psp124BI	GAGCTC	2 cut(s)	178, 1646
Psp5II	RGGWCCY	1 cut(s)	1213
Psp6I	CCWGG	3 cut(s)	377, 1215, 1765
PspEI	GGTNACC	1 cut(s)	373
PspFI	CCCAGC	1 cut(s)	2004
PspGI	CCWGG	3 cut(s)	377, 1215, 1765
PspN4I	GGNNCC	2 cut(s)	1978, 2258
PspPI	GGNCC	6 cut(s)	35, 480, 1213, 1313, 1733, 2256
PspPPI	RGGWCCY	1 cut(s)	1213
PstI	CTGCAG	1 cut(s)	1093
PstNI	CAGNNNCTG	1 cut(s)	1525
PsuI	RGATCY	3 cut(s)	612, 1055, 1976
PvuII	CAGCTG	2 cut(s)	470, 1717
RsaI	GTAC	8 cut(s)	91, 111, 186, 440, 516, 586, 1267, 1885
RsaNI	GTAC	8 cut(s)	90, 110, 185, 439, 515, 585, 1266, 1884
RseI	CAYNNNNRTG	2 cut(s)	1633, 2197
SacI	GAGCTC	2 cut(s)	178, 1646
SaqAI	TTAA	9 cut(s)	414, 530, 929, 1074, 1137, 1200, 1488, 1938, 2159
SatI	GCNGC	8 cut(s)	50, 726, 1003, 1122, 1298, 1715, 1829, 2276
Sau3AI	GATC	9 cut(s)	10, 612, 1029, 1055, 1600, 1806, 1813, 1976, 1997
Sau96I	GGNCC	6 cut(s)	35, 480, 1213, 1313, 1733, 2256
ScaI	AGTACT	1 cut(s)	440
SchI	GAGTC	1 cut(s)	878
ScrFI	CCNGG	3 cut(s)	379, 1217, 1767
SduI	GDGCHC	2 cut(s)	178, 1646
SfaNI	GCATC	6 cut(s)	190, 394, 1377, 1447, 1923, 1942
SfcI	CTRYAG	2 cut(s)	1089, 2300
SinI	GGWCC	5 cut(s)	35, 480, 1213, 1733, 2256
SmiMI	CAYNNNNRTG	2 cut(s)	1633, 2197
SmlI	CTYRAG	5 cut(s)	164, 866, 890, 1639, 2117
SmoI	CTYRAG	5 cut(s)	164, 866, 890, 1639, 2117
SpeI	ACTAGT	1 cut(s)	949
SphI	GCATGC	2 cut(s)	654, 1928
SseBI	AGGCCT	1 cut(s)	1783
SsiI	CCGC	5 cut(s)	38, 49, 371, 726, 1831
SspI	AATATT	1 cut(s)	2271
SspMI	CTAG	9 cut(s)	263, 950, 1014, 1263, 1557, 1698, 1761, 1779, 1785
SstI	GAGCTC	2 cut(s)	178, 1646
StuI	AGGCCT	1 cut(s)	1783
StyD4I	CCNGG	3 cut(s)	377, 1215, 1765
StyI	CCWWGG	3 cut(s)	301, 1784, 1790
TaaI	ACNGT	7 cut(s)	31, 218, 425, 443, 644, 788, 1475
TaiI	ACGT	1 cut(s)	804
TaqI	TCGA	2 cut(s)	172, 178
TatI	WGTACW	4 cut(s)	109, 438, 514, 1265
TauI	GCSGC	2 cut(s)	52, 728
TfiI	GAWTC	7 cut(s)	230, 596, 1085, 1241, 1424, 1580, 1868
Tru1I	TTAA	9 cut(s)	414, 530, 929, 1074, 1137, 1200, 1488, 1938, 2159
Tru9I	TTAA	9 cut(s)	414, 530, 929, 1074, 1137, 1200, 1488, 1938, 2159
TscAI	CASTG	8 cut(s)	395, 793, 816, 1458, 1480, 1486, 1878, 2016
TseFI	GTSAC	2 cut(s)	1247, 2183
TseI	GCWGC	6 cut(s)	1002, 1121, 1297, 1714, 1828, 2275
Tsp45I	GTSAC	2 cut(s)	1247, 2183
TspDTI	ATGAA	3 cut(s)	1317, 1415, 2004
TspGWI	ACGGA	3 cut(s)	23, 149, 605
TspRI	CASTG	8 cut(s)	395, 793, 816, 1458, 1480, 1486, 1878, 2016
Van91I	CCANNNNNTGG	2 cut(s)	156, 776
VpaK11BI	GGWCC	5 cut(s)	35, 480, 1213, 1733, 2256
XapI	RAATTY	2 cut(s)	931, 1774
XceI	RCATGY	4 cut(s)	654, 1900, 1928, 1972
XcmI	CCANNNNNNNNNTGG	1 cut(s)	490
XmaJI	CCTAGG	1 cut(s)	1784
XspI	CTAG	9 cut(s)	263, 950, 1014, 1263, 1557, 1698, 1761, 1779, 1785
ZrmI	AGTACT	1 cut(s)	440

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.