Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr6B

Orthogroup ID

OG0003837

Physical Location & Seq

Genomic Coordinates Forward (+)

54441688 .. 54448869

Gene Structure 7182 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh6BG314200.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1869 bp

ATGATGGGTACTGACTTGCACCATGTGCTGAGAAGCCTCTGTTTCAATACGGAGTGGAACTACGCCATTTTCTGGAAACTGAAGCATCGGGCTCGAATGGTGCTGACTTGGGAGGACGCTTACTATGACAACTGTGAGCAACATGATAATTCAGGGAATAGATGCTTTATTAAGACACTGGAGGCATTGCATGGCAGCCATTATCCACATGATCCCCTTGGGCTAGCCGTGGCAAAAATGTCGTATCATGTATATACTCTGGGAGAAGGGATTGTCGGACAAGTGGCAGTTACTGGGAAGCATCAGTGGATCTTTGCAGATGATATTTTGAAGAATAACTGTTCACCGTCTGAGTACTGTGATGGATGGCAAAGTCAATTTTCAGCTGGCATAAGGACTATTGTCGTTGTAGCTGTTGTTCCGCATGGAGTTGTACAGCTTGGTTCTTTAAATAAAATCACTGAAAATGTGAAGCTGGTATCTCATATCAAAGATGTTTTTATGGCTCAAGATTTCCCAGCAGGGCATATCCAATCTAGCATAGACAGTTCAGTATGTGAGGCAATATCTTCAAAAAAATTGGTTTCAGGGACTTTTCCGGATTGCTTGCAAAATTTAGATAAAGCCATAAATAGAGAAAAGTCAGATGTTTGGTTGTCCGCTTTTCCCCAGTCTGGGAAAGACAGTGATAGTTCTTACATTTTTCCATTGACTGGCATTCTGAAGAATGCAGTTGAAGTGGTCAATAAGCATGGAGAACTTGAGTCATCCAACATGGGAGGTGATGAGAGTCCCAAACTACATCAGTCAAAATCAAGTATCTTCAAGTTGGAAAATTGCAAATTAGTAGGAGTGGAATTACCTGATAGCAGGAAGTGTACAGGGGAGAGTAGTGGCTGCAAAGATATGGGGATGTCTTCCACAAACAATGCCAATCCATTATCTCATGCTAATGATTGTGCAGACTTATCTTCAACGTTTGTCAACTCTGCTGTAAATGACGGGGTTAATTTGGACAGTATAGATCTTTACCATAATGAGGTGTTGCACGTAAGTGAACCCTTGGATGTTAAGTTTCAGAGCAACCTTGAAAACTTGAAGTTTCCAACTGAACCAGGTCACGTGGACACATCCAGTACATCTTTGATGTTCCCTGCTGGCTGTGAGTTGCATGAAGCACTTGGACCAGCTTTTATGAATAAGAGTAACTTTTTTGATTGGGAAGCAGAGAAGATTGGAGATAGAATTACTACTGAGATGCCTGAGGGAATGAACTCTAGCCAGTTGACGTGTGATTCTTGCCCAGAGCATCTTCTTGAAGCTGTAGTGGCTAAAGTTTGCCATAGTGGCAGTCATGTTAAAAGTGAAAAATCATTCTGTAAATCAATGCAGTCTCTGTTGACAACTGAAAAGTATCCAGAGCCTTCTAGCCATACTACACATACGATTGATTCAGAAAATTATTCCATTGATCAGCCGTCTATGAGAGGAGAGGACACACAGCAATGTTTGAGCTCATCAGGAATATGTGGGGTGATATCGCCAAAATGGTTTTCGTCACCTTGTCCTAGTGCTTGTAGTGAGCAGCAGGAGAGGTCTTCAGGACCAGTTAAAAACAACAAGAAGAGGGCTAGACCTGGTGAGACTTCTAGACCTAGGCCGAGGGACAGACAATTAATCCAGGATCGTATTAAGGAACTGCGGGAGCTAACACCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAACGCACAATCAAGCACATGTTATTTCTTCAAAGTATCACTAAGCATGCGGATAAACTAAATAAGTGTGCTGATGCAAAGGTAAATCTTTTGATCAAGTTTATTATGGCCTGGGATTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

622

Amino Acids

68.9

Weight (kDa)

5.95

Isoelectric Point (pI)

48.35

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	6 - 167	3e-40	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	550 - 611	1.8e-38	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06150 AT1G06150 AT2G31280 AT2G31280 AT2G31280
fragaria_vesca	FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810
malus_domestica	MD05G1200100.v1.1 MD10G1186300.v1.1
prunus_persica	Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1
pyrus_communis	pycom05g18670 pycom10g16110 pycom10g16120
rosa_chinensis	RchiOBHm_Chr6g0288541
rosa_laevigata	RLG00000012390
rosa_multiflora	Rmu_sc0002058.1_g000016
rosa_roxburghii	Rroxscaffold_7G00180000
rosa_rugosa	Rorug06G0196800 Rorug06G0196900
rosa_samantha	Rh6AG308800 Rh6BG314200 Rh6CG321500 Rh6DG307300
rosa_wichuraiana	Rw6G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccB7I	CCANNNNNTGG	2 cut(s)	72, 713
AccIII	TCCGGA	1 cut(s)	598
AciI	CCGC	4 cut(s)	422, 660, 1702, 1799
AclI	AACGTT	1 cut(s)	977
AclWI	GGATC	3 cut(s)	206, 317, 1692
AcsI	RAATTY	1 cut(s)	613
AcuI	CTGAAG	3 cut(s)	101, 743, 1584
AcvI	CACGTG	1 cut(s)	1123
AdeI	CACNNNGTG	1 cut(s)	25
AfaI	GTAC	5 cut(s)	10, 356, 435, 880, 1138
AfiI	CCNNNNNNNGG	5 cut(s)	72, 674, 675, 713, 1039
AflIII	ACRYGT	2 cut(s)	1289, 1767
AjiI	CACGTC	1 cut(s)	1290
AjnI	CCWGG	4 cut(s)	1114, 1636, 1680, 1859
AjuI	GAANNNNNNNTTGG	2 cut(s)	1537, 1569
AleI	CACNNNNGTG	1 cut(s)	1053
AluBI	AGCT	8 cut(s)	386, 413, 439, 475, 1190, 1322, 1515, 1708
AluI	AGCT	8 cut(s)	386, 413, 439, 475, 1190, 1322, 1515, 1708
Alw21I	GWGCWC	1 cut(s)	1517
Alw26I	GTCTC	2 cut(s)	1398, 1637
AlwI	GGATC	3 cut(s)	206, 317, 1692
AlwNI	CAGNNNCTG	2 cut(s)	293, 1396
Aor13HI	TCCGGA	1 cut(s)	598
AoxI	GGCC	2 cut(s)	1658, 1857
ApeKI	GCWGC	3 cut(s)	195, 897, 1585
ApoI	RAATTY	1 cut(s)	613
AseI	ATTAAT	1 cut(s)	1676
AspA2I	CCTAGG	1 cut(s)	1655
AspS9I	GGNCC	2 cut(s)	1184, 1604
AsuHPI	GGTGA	5 cut(s)	336, 794, 1546, 1551, 1652
AsuNHI	GCTAGC	1 cut(s)	223
AvaII	GGWCC	2 cut(s)	1184, 1604
AvrII	CCTAGG	1 cut(s)	1655
AxyI	CCTNAGG	1 cut(s)	1263
BanII	GRGCYC	2 cut(s)	94, 1517
BbrPI	CACGTG	1 cut(s)	1123
BbsI	GAAGAC	2 cut(s)	909, 1590
Bbv12I	GWGCWC	1 cut(s)	1517
BbvI	GCAGC	3 cut(s)	207, 884, 1597
BccI	CCATC	2 cut(s)	356, 360
BceAI	ACGGC	2 cut(s)	212, 1462
BcgI	CGANNNNNNTGC	4 cut(s)	74, 108, 222, 256
BciT130I	CCWGG	4 cut(s)	1116, 1638, 1682, 1861
BciVI	GTATCC	1 cut(s)	1425
BclI	TGATCA	2 cut(s)	1471, 1842
BcoDI	GTCTC	2 cut(s)	1398, 1637
BfaI	CTAG	8 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656
BfmI	CTRYAG	1 cut(s)	1323
BfuI	GTATCC	1 cut(s)	1425
BglI	GCCNNNNNGGC	1 cut(s)	1347
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	3 cut(s)	196, 898, 1586
BlnI	CCTAGG	1 cut(s)	1655
BlsI	GCNGC	3 cut(s)	197, 899, 1587
BmcAI	AGTACT	1 cut(s)	356
Bme1390I	CCNGG	4 cut(s)	1116, 1638, 1682, 1861
Bme18I	GGWCC	2 cut(s)	1184, 1604
BmgBI	CACGTC	1 cut(s)	1290
BmgT120I	GGNCC	2 cut(s)	1184, 1604
BmrFI	CCNGG	4 cut(s)	1116, 1638, 1682, 1861
BmrI	ACTGGG	2 cut(s)	303, 664
BmsI	GCATC	6 cut(s)	94, 152, 310, 1248, 1318, 1813
BmtI	GCTAGC	1 cut(s)	227
BmuI	ACTGGG	2 cut(s)	303, 664
BoxI	GACNNNNGTC	1 cut(s)	401
BpiI	GAAGAC	2 cut(s)	909, 1590
BpmI	CTGGAG	1 cut(s)	200
BpuEI	CTTGAG	2 cut(s)	492, 782
BsaAI	YACGTR	2 cut(s)	1051, 1123
BsaJI	CCNNGG	6 cut(s)	217, 228, 1062, 1655, 1661, 1860
BsaWI	WCCGGW	1 cut(s)	598
Bsc4I	CCNNNNNNNGG	5 cut(s)	72, 674, 675, 713, 1039
Bse1I	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
Bse21I	CCTNAGG	1 cut(s)	1263
Bse3DI	GCAATG	2 cut(s)	185, 1511
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	4 cut(s)	1116, 1638, 1682, 1861
BseDI	CCNNGG	6 cut(s)	217, 228, 1062, 1655, 1661, 1860
BseGI	GGATG	5 cut(s)	371, 767, 918, 1072, 1130
BseLI	CCNNNNNNNGG	5 cut(s)	72, 674, 675, 713, 1039
BseMI	GCAATG	2 cut(s)	185, 1511
BseMII	CTCAG	4 cut(s)	20, 342, 1245, 1254
BseNI	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
BseRI	GAGGAG	1 cut(s)	1503
BseXI	GCAGC	3 cut(s)	207, 884, 1597
BseYI	CCCAGC	1 cut(s)	517
BsgI	GTGCAG	2 cut(s)	981, 1750
BshFI	GGCC	2 cut(s)	1660, 1859
BsiHKAI	GWGCWC	1 cut(s)	1517
BsiSI	CCGG	1 cut(s)	599
BslFI	GGGAC	3 cut(s)	604, 777, 1679
BslI	CCNNNNNNNGG	5 cut(s)	72, 674, 675, 713, 1039
BsmAI	GTCTC	2 cut(s)	1398, 1637
BsmFI	GGGAC	3 cut(s)	604, 777, 1679
BsmI	GAATGC	2 cut(s)	717, 733
BsnI	GGCC	2 cut(s)	1660, 1859
Bsp1286I	GDGCHC	2 cut(s)	94, 1517
Bsp13I	TCCGGA	1 cut(s)	598
Bsp1407I	TGTACA	2 cut(s)	433, 878
Bsp143I	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
BspACI	CCGC	4 cut(s)	422, 660, 1702, 1799
BspANI	GGCC	2 cut(s)	1660, 1859
BspCNI	CTCAG	4 cut(s)	21, 343, 1246, 1255
BspEI	TCCGGA	1 cut(s)	598
BspOI	GCTAGC	1 cut(s)	227
BspPI	GGATC	3 cut(s)	206, 317, 1692
BsrDI	GCAATG	2 cut(s)	185, 1511
BsrGI	TGTACA	2 cut(s)	433, 878
BsrI	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
BssECI	CCNNGG	6 cut(s)	217, 228, 1062, 1655, 1661, 1860
BssMI	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
BssT1I	CCWWGG	3 cut(s)	217, 1062, 1655
Bst2UI	CCWGG	4 cut(s)	1116, 1638, 1682, 1861
Bst4CI	ACNGT	7 cut(s)	134, 341, 348, 359, 548, 686, 1019
Bst6I	CTCTTC	1 cut(s)	1619
BstAPI	GCANNNNNTGC	1 cut(s)	25
BstAUI	TGTACA	2 cut(s)	433, 878
BstBAI	YACGTR	2 cut(s)	1051, 1123
BstC8I	GCNNGC	5 cut(s)	225, 388, 608, 1159, 1797
BstDEI	CTNAG	5 cut(s)	29, 351, 1254, 1263, 1791
BstDSI	CCRYGG	1 cut(s)	228
BstF5I	GGATG	5 cut(s)	371, 767, 918, 1072, 1130
BstKTI	GATC	6 cut(s)	214, 312, 1027, 1474, 1687, 1845
BstMAI	GTCTC	2 cut(s)	1398, 1637
BstMBI	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
BstNI	CCWGG	4 cut(s)	1116, 1638, 1682, 1861
BstNSI	RCATGY	2 cut(s)	1771, 1799
BstPAI	GACNNNNGTC	1 cut(s)	401
BstSCI	CCNGG	4 cut(s)	1114, 1636, 1680, 1859
BstSFI	CTRYAG	1 cut(s)	1323
BstV1I	GCAGC	3 cut(s)	207, 884, 1597
BstV2I	GAAGAC	2 cut(s)	909, 1590
BstX2I	RGATCY	2 cut(s)	309, 1024
BstYI	RGATCY	2 cut(s)	309, 1024
Bsu36I	CCTNAGG	1 cut(s)	1263
BsuI	GTATCC	1 cut(s)	1425
BsuRI	GGCC	2 cut(s)	1660, 1859
BtgI	CCRYGG	1 cut(s)	228
BtrI	CACGTC	1 cut(s)	1290
BtsCI	GGATG	5 cut(s)	371, 767, 918, 1072, 1130
BtsI	GCAGTG	1 cut(s)	1742
BtsIMutI	CAGTG	5 cut(s)	176, 311, 459, 691, 1742
Cac8I	GCNNGC	5 cut(s)	225, 388, 608, 1159, 1797
CaiI	CAGNNNCTG	2 cut(s)	293, 1396
Cfr13I	GGNCC	2 cut(s)	1184, 1604
CseI	GACGC	1 cut(s)	125
CsiI	ACCWGGT	2 cut(s)	1114, 1636
Csp6I	GTAC	5 cut(s)	9, 355, 434, 879, 1137
CviQI	GTAC	5 cut(s)	9, 355, 434, 879, 1137
DdeI	CTNAG	5 cut(s)	29, 351, 1254, 1263, 1791
DpnI	GATC	6 cut(s)	213, 311, 1026, 1473, 1686, 1844
DpnII	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
DraI	TTTAAA	1 cut(s)	450
DraIII	CACNNNGTG	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	1619
EarI	CTCTTC	1 cut(s)	1619
Ecl136II	GAGCTC	1 cut(s)	1515
Eco130I	CCWWGG	3 cut(s)	217, 1062, 1655
Eco24I	GRGCYC	2 cut(s)	94, 1517
Eco32I	GATATC	1 cut(s)	1539
Eco47I	GGWCC	2 cut(s)	1184, 1604
Eco53kI	GAGCTC	1 cut(s)	1515
Eco57I	CTGAAG	3 cut(s)	101, 743, 1584
Eco72I	CACGTG	1 cut(s)	1123
Eco81I	CCTNAGG	1 cut(s)	1263
EcoICRI	GAGCTC	1 cut(s)	1515
EcoRII	CCWGG	4 cut(s)	1114, 1636, 1680, 1859
EcoRV	GATATC	1 cut(s)	1539
EcoT14I	CCWWGG	3 cut(s)	217, 1062, 1655
EcoT38I	GRGCYC	2 cut(s)	94, 1517
ErhI	CCWWGG	3 cut(s)	217, 1062, 1655
FalI	AAGNNNNNCTT	2 cut(s)	1193, 1225
FaqI	GGGAC	3 cut(s)	604, 777, 1679
FauI	CCCGC	1 cut(s)	1695
FbaI	TGATCA	2 cut(s)	1471, 1842
Fnu4HI	GCNGC	3 cut(s)	196, 898, 1586
FokI	GGATG	5 cut(s)	378, 754, 925, 1079, 1117
FriOI	GRGCYC	2 cut(s)	94, 1517
Fsp4HI	GCNGC	3 cut(s)	196, 898, 1586
FspBI	CTAG	8 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656
GluI	GCNGC	3 cut(s)	196, 898, 1586
GsaI	CCCAGC	1 cut(s)	521
GsuI	CTGGAG	1 cut(s)	200
HaeIII	GGCC	2 cut(s)	1660, 1859
HapII	CCGG	1 cut(s)	599
HgaI	GACGC	1 cut(s)	125
HincII	GTYRAC	3 cut(s)	985, 1287, 1401
HindII	GTYRAC	3 cut(s)	985, 1287, 1401
HinfI	GANTC	5 cut(s)	764, 790, 1295, 1451, 1739
HpaII	CCGG	1 cut(s)	599
HphI	GGTGA	5 cut(s)	336, 794, 1546, 1551, 1652
Hpy166II	GTNNAC	7 cut(s)	344, 879, 985, 1058, 1126, 1287, 1401
Hpy188I	TCNGA	6 cut(s)	278, 352, 646, 723, 1080, 1456
Hpy188III	TCNNGA	8 cut(s)	73, 509, 599, 1316, 1418, 1521, 1602, 1650
Hpy8I	GTNNAC	7 cut(s)	344, 879, 985, 1058, 1126, 1287, 1401
HpyAV	CCTTC	2 cut(s)	260, 1434
HpyCH4III	ACNGT	7 cut(s)	134, 341, 348, 359, 548, 686, 1019
HpyCH4IV	ACGT	4 cut(s)	977, 1050, 1122, 1289
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
HpyF3I	CTNAG	5 cut(s)	29, 351, 1254, 1263, 1791
HpySE526I	ACGT	4 cut(s)	977, 1050, 1122, 1289
Kpn2I	TCCGGA	1 cut(s)	598
Ksp22I	TGATCA	2 cut(s)	1471, 1842
Kzo9I	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
LmnI	GCTCC	2 cut(s)	1705, 1721
Lsp1109I	GCAGC	3 cut(s)	207, 884, 1597
LweI	GCATC	6 cut(s)	94, 152, 310, 1248, 1318, 1813
MabI	ACCWGGT	2 cut(s)	1114, 1636
MaeI	CTAG	8 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656
MaeII	ACGT	4 cut(s)	977, 1050, 1122, 1289
MaeIII	GTNAC	4 cut(s)	289, 1118, 1205, 1557
MalI	GATC	6 cut(s)	213, 311, 1026, 1473, 1686, 1844
MboI	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
MflI	RGATCY	2 cut(s)	309, 1024
MhlI	GDGCHC	2 cut(s)	94, 1517
MlyI	GAGTC	2 cut(s)	773, 799
MmeI	TCCRAC	4 cut(s)	256, 795, 810, 1130
MroI	TCCGGA	1 cut(s)	598
MseI	TTAA	8 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692
MslI	CAYNNNNRTG	3 cut(s)	951, 1053, 1504
MspA1I	CMGCKG	1 cut(s)	386
MspI	CCGG	1 cut(s)	599
MspR9I	CCNGG	4 cut(s)	1116, 1638, 1682, 1861
Mva1269I	GAATGC	2 cut(s)	717, 733
MvaI	CCWGG	4 cut(s)	1116, 1638, 1682, 1861
MwoI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
NdeII	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
NheI	GCTAGC	1 cut(s)	223
NmeAIII	GCCGAG	1 cut(s)	1686
NmuCI	GTSAC	2 cut(s)	1118, 1557
NspI	RCATGY	2 cut(s)	1771, 1799
OliI	CACNNNNGTG	1 cut(s)	1053
PaeI	GCATGC	1 cut(s)	1799
PciI	ACATGT	1 cut(s)	1767
PctI	GAATGC	2 cut(s)	717, 733
PfeI	GAWTC	3 cut(s)	1295, 1451, 1739
PflMI	CCANNNNNTGG	2 cut(s)	72, 713
PfoI	TCCNGGA	1 cut(s)	1680
PkrI	GCNGC	3 cut(s)	197, 899, 1587
PleI	GAGTC	2 cut(s)	772, 798
PmaCI	CACGTG	1 cut(s)	1123
PmlI	CACGTG	1 cut(s)	1123
PpsI	GAGTC	2 cut(s)	772, 798
Ppu21I	YACGTR	2 cut(s)	1051, 1123
PscI	ACATGT	1 cut(s)	1767
PshAI	GACNNNNGTC	1 cut(s)	401
PshBI	ATTAAT	1 cut(s)	1676
Psp124BI	GAGCTC	1 cut(s)	1517
Psp1406I	AACGTT	1 cut(s)	977
Psp6I	CCWGG	4 cut(s)	1114, 1636, 1680, 1859
PspCI	CACGTG	1 cut(s)	1123
PspFI	CCCAGC	1 cut(s)	517
PspGI	CCWGG	4 cut(s)	1114, 1636, 1680, 1859
PspPI	GGNCC	2 cut(s)	1184, 1604
PsrI	GAACNNNNNNTAC	2 cut(s)	402, 434
PstNI	CAGNNNCTG	2 cut(s)	293, 1396
PsuI	RGATCY	2 cut(s)	309, 1024
PvuII	CAGCTG	1 cut(s)	386
RsaI	GTAC	5 cut(s)	10, 356, 435, 880, 1138
RsaNI	GTAC	5 cut(s)	9, 355, 434, 879, 1137
RseI	CAYNNNNRTG	3 cut(s)	951, 1053, 1504
SacI	GAGCTC	1 cut(s)	1517
SaqAI	TTAA	8 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692
SatI	GCNGC	3 cut(s)	196, 898, 1586
Sau3AI	GATC	6 cut(s)	211, 309, 1024, 1471, 1684, 1842
Sau96I	GGNCC	2 cut(s)	1184, 1604
ScaI	AGTACT	1 cut(s)	356
SchI	GAGTC	2 cut(s)	773, 799
ScrFI	CCNGG	4 cut(s)	1116, 1638, 1682, 1861
SduI	GDGCHC	2 cut(s)	94, 1517
SexAI	ACCWGGT	2 cut(s)	1114, 1636
SfaNI	GCATC	6 cut(s)	94, 152, 310, 1248, 1318, 1813
SfcI	CTRYAG	1 cut(s)	1323
SinI	GGWCC	2 cut(s)	1184, 1604
SmiMI	CAYNNNNRTG	3 cut(s)	951, 1053, 1504
SmlI	CTYRAG	2 cut(s)	507, 761
SmoI	CTYRAG	2 cut(s)	507, 761
SphI	GCATGC	1 cut(s)	1799
SsiI	CCGC	4 cut(s)	422, 660, 1702, 1799
SspMI	CTAG	8 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656
SstI	GAGCTC	1 cut(s)	1517
StyD4I	CCNGG	4 cut(s)	1114, 1636, 1680, 1859
StyI	CCWWGG	3 cut(s)	217, 1062, 1655
TaaI	ACNGT	7 cut(s)	134, 341, 348, 359, 548, 686, 1019
TaiI	ACGT	4 cut(s)	980, 1053, 1125, 1292
TaqI	TCGA	1 cut(s)	94
TatI	WGTACW	4 cut(s)	354, 433, 878, 1136
TfiI	GAWTC	3 cut(s)	1295, 1451, 1739
Tru1I	TTAA	8 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692
Tru9I	TTAA	8 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692
TscAI	CASTG	5 cut(s)	183, 311, 466, 691, 1749
TseFI	GTSAC	2 cut(s)	1118, 1557
TseI	GCWGC	3 cut(s)	195, 897, 1585
Tsp45I	GTSAC	2 cut(s)	1118, 1557
TspDTI	ATGAA	3 cut(s)	1188, 1211, 1286
TspGWI	ACGGA	1 cut(s)	65
TspRI	CASTG	5 cut(s)	183, 311, 466, 691, 1749
Van91I	CCANNNNNTGG	2 cut(s)	72, 713
VpaK11BI	GGWCC	2 cut(s)	1184, 1604
VspI	ATTAAT	1 cut(s)	1676
XapI	RAATTY	1 cut(s)	613
XbaI	TCTAGA	1 cut(s)	1649
XceI	RCATGY	2 cut(s)	1771, 1799
XmaJI	CCTAGG	1 cut(s)	1655
XspI	CTAG	8 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656
ZrmI	AGTACT	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.