Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000007

Orthogroup ID

OG0003837

Physical Location & Seq

Genomic Coordinates Reverse (-)

19515775 .. 19522406

Gene Structure 6632 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_7G00180000.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2190 bp

ATGATGGGGACTGACTTGCACCATGTGCTGAGAAGCCTCTGTTTCAATACGGAGTGGAACTACGCCATTTTCTGGAAACTGAAGCATCGGGCTCGAATGGTGCTGACTTGGGAGGACGCTTACTATGACAACTGTGAGCAACATTATAATTCAGGGAATAGATGCTTTATTAAGACACTGGAGGCATTGCATGGCAGCCATTATCCACATGATCCCCTTGGACTAGCCATGGCAAAAATGTCATATCATGTATATACTCTGGGAGAAGGGATTGTCGGACAAGTGGCAGTTACTGGGAAGCATCAGTGGATCTTTGCAGATGATATTTTGAAGAATAACTGTTCACCGTCTGAGTACTGTGATGGATGGCAAAGTCAATTTTCAGCTGGCATAAGGACTATTGTCGTTGTAGCTGTTGTTCCGCATGGAGTTGTACAGCTTGGTTCTTTAAATAAAATCACTGAAAATGTGAAGCTGGTATCTCATATCAAAGATGTTTTTATGGCTCAAGATTTCCCAGCAGGGCATATCCAATCTAGCATAGACAGTTCAGTATGTGAGGCAATATCTCCAAAAAATTTGGTTTCAGGGACTTTTCCGGATTGCTTGCAAAATTTAGATAAAGCCATAAATAGAGAAAAGTCAGATGTTTGGTTGTCCACTTTTCCCCAGTCTGGGAAAGACAGTGATAGTTCTTACATTTTTCCATTGACTGGCATTCTGAAGAATGCAGTTGAAGTGGTCAATAAGCATGGAGAACTTGAGTCATCCAACATGGGAGGTGATGAGAGTCCCAAACTACATCAGTCAAAATCAAGTATCTTCAAGTTGGAAAATTGCAAATTAGTAGGAGTGGAATTACCTGATAGCAGGAAGTGTACAGGGGAGAGTAGTGGCTGCAAAGATATGGGGATGTCTTCCACAAACAATGCCAATCCATTATCTCATGCTAATGATTGTGCAGACTTATCTTCAACGTTTGTCAACTCTGCTGTAAATGACGGGGTTAATTTGGACAGTATAGATCTTTACCATAATGAGGTGTTGCACGTAAGTGAACCCTTGGATGTTAAGTTTCAGAGCAACCTTGAAAACTTGAAGTTTCCAACTGAACCAGGTCACGTGGACACGTCCAGTGCATCTTTGATGTTCCCTGCTGGCTGTGAGTTGCATGAAGCACTTGGACCAGCTTTTATGAATAAGAGTAACTTTTTTGATTGGGAAGCAGAGAAGATTGGAGATAGAATTACTGCTGAGATGCCTGAGGGAATGAACTCTAGCCAGTTGACGTCTGATTCTTGCCCAGAGCATCTTCTTGAAGCTGTAGTGGCTAAAGTTTGCCATAGTGGCAGTCATGTTAAAAGTGAAAAATCATTCTGTAAATCAATGCAGTCTCTGTTGACAACAGAAAAGTATCCAGAGCCTTCTAGCCATACTACACATACGATTGATTCAGAAAATTATTCCATTGATCAGCCGTCTATGAGAGGAGAGGACACACAGCAATGTTTGAGCTCATCAGGAATATGTGGGGTGATATCCCCAAAATGGTTTTCGTCACCTTGTCCTAGTGCTTGTAGTGAACAGCAGGAGAGGTCTTCAGGACCAGTTAAAAACAACAAGAAGAGGGCTAGACCTGGTGAGACTTCTAGACCTAGGCCGAGGGACAGACAATTAATCCAGGATCGTATTAAGGAACTGAGGGAGCTAACACCAAATGGAGCAAAGTGCAGTATTGATTCACTGCTGGAACGCACAATCAAGCACATGTTATTTCTTCAAAGTATCACTAAGCATGCGGATAAACTAAATAAGTGTGCTGATGCAAAGTTGTGTCCCAAGGAAACAAGCATGCTAGGATCTTCTAACTATGAAAGGGGATCGAGCTGGGCAGTGGAGGTGGGAGGCAATCTAAAAGTCTGTTCAATAGTGGTGGAGAATCTGAACAAGAGTGGGCAGATGGTTGTGGAGATGATGTGTGAAGAATGCAGCCATTTCCTTGAGATCGCAGAAGCTATAAGGAGCTTGGGTCTGACAATCTTAAAAGGTGTAACGGAGGCCCGTGGTGACAAGACATGGATATGTTTTATAGTTGAGGGGCAGAACAACAGAAACATACACAGGATGGATATCTTGTGGTCCCTTGTTCAGATACTGCAGCCCAAGAACCCTATGCAACAACAGTTATAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003700 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0006355 GO:0007275 GO:0008150 GO:0009889 GO:0010468 GO:0010556 GO:0019219 GO:0019222 GO:0022622 GO:0031323 GO:0031326 GO:0032501 GO:0032502 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0044424 GO:0044464 GO:0048364 GO:0048731 GO:0048856 GO:0050789 GO:0050794 GO:0051171 GO:0051252 GO:0060255 GO:0065007 GO:0080090 GO:0099402 GO:0140110 GO:1903506 GO:2000112 GO:2001141

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

bHLH-MYC_N

Protein Analysis

729

Amino Acids

80.82

Weight (kDa)

5.92

Isoelectric Point (pI)

47.96

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
bHLH-MYC_N	PF14215	6 - 167	3.9e-40	bHLH-MYC and R2R3-MYB transcription factors N-terminal
bHLH_LHW	PF23176	550 - 611	2.9e-38	Transcription factor LHW bHLH domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0003837)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G06150 AT1G06150 AT2G31280 AT2G31280 AT2G31280
fragaria_vesca	FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810 FvH4_2g21810
malus_domestica	MD05G1200100.v1.1 MD10G1186300.v1.1
prunus_persica	Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1 Prupe.8G225900_v2.0.a1
pyrus_communis	pycom05g18670 pycom10g16110 pycom10g16120
rosa_chinensis	RchiOBHm_Chr6g0288541
rosa_laevigata	RLG00000012390
rosa_multiflora	Rmu_sc0002058.1_g000016
rosa_roxburghii	Rroxscaffold_7G00180000
rosa_rugosa	Rorug06G0196800 Rorug06G0196900
rosa_samantha	Rh6AG308800 Rh6BG314200 Rh6CG321500 Rh6DG307300
rosa_wichuraiana	Rw6G026670

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	147
AatII	GACGTC	1 cut(s)	1292
AccB7I	CCANNNNNTGG	2 cut(s)	72, 713
AccIII	TCCGGA	1 cut(s)	598
AciI	CCGC	2 cut(s)	422, 1799
AclI	AACGTT	1 cut(s)	977
AclWI	GGATC	5 cut(s)	206, 317, 1692, 1867, 1888
AcsI	RAATTY	2 cut(s)	577, 613
AcuI	CTGAAG	3 cut(s)	101, 743, 1584
AcvI	CACGTG	1 cut(s)	1123
AcyI	GRCGYC	1 cut(s)	1289
AdeI	CACNNNGTG	1 cut(s)	25
AfaI	GTAC	3 cut(s)	356, 435, 880
AfiI	CCNNNNNNNGG	6 cut(s)	72, 674, 675, 713, 1039, 1548
AflIII	ACRYGT	2 cut(s)	1128, 1767
AjiI	CACGTC	1 cut(s)	1131
AjnI	CCWGG	3 cut(s)	1114, 1636, 1680
AjuI	GAANNNNNNNTTGG	2 cut(s)	1537, 1569
AleI	CACNNNNGTG	1 cut(s)	1053
Alw21I	GWGCWC	1 cut(s)	1517
Alw26I	GTCTC	2 cut(s)	1398, 1637
AlwI	GGATC	5 cut(s)	206, 317, 1692, 1867, 1888
AlwNI	CAGNNNCTG	3 cut(s)	293, 1396, 2155
Aor13HI	TCCGGA	1 cut(s)	598
AoxI	GGCC	2 cut(s)	1658, 2058
ApeKI	GCWGC	4 cut(s)	195, 897, 1989, 2158
ApoI	RAATTY	2 cut(s)	577, 613
AseI	ATTAAT	1 cut(s)	1676
AspA2I	CCTAGG	1 cut(s)	1655
AspS9I	GGNCC	4 cut(s)	1184, 1604, 2059, 2139
AsuHPI	GGTGA	6 cut(s)	336, 794, 1546, 1551, 1652, 2078
AvaII	GGWCC	3 cut(s)	1184, 1604, 2139
AvrII	CCTAGG	1 cut(s)	1655
AxyI	CCTNAGG	1 cut(s)	1263
BanII	GRGCYC	2 cut(s)	94, 1517
BbrPI	CACGTG	1 cut(s)	1123
BbsI	GAAGAC	2 cut(s)	909, 1590
Bbv12I	GWGCWC	1 cut(s)	1517
BbvI	GCAGC	4 cut(s)	207, 884, 2001, 2170
BccI	CCATC	4 cut(s)	356, 360, 1954, 2119
BceAI	ACGGC	1 cut(s)	1462
BcgI	CGANNNNNNTGC	2 cut(s)	74, 108
BciT130I	CCWGG	3 cut(s)	1116, 1638, 1682
BciVI	GTATCC	1 cut(s)	1425
BclI	TGATCA	1 cut(s)	1471
BcoDI	GTCTC	2 cut(s)	1398, 1637
BfaI	CTAG	9 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1856
BfmI	CTRYAG	2 cut(s)	1323, 2156
BfuI	GTATCC	1 cut(s)	1425
BglI	GCCNNNNNGGC	1 cut(s)	1347
BglII	AGATCT	1 cut(s)	1024
BisI	GCNGC	4 cut(s)	196, 898, 1990, 2159
BlnI	CCTAGG	1 cut(s)	1655
BlsI	GCNGC	4 cut(s)	197, 899, 1991, 2160
BmcAI	AGTACT	1 cut(s)	356
Bme1390I	CCNGG	3 cut(s)	1116, 1638, 1682
Bme18I	GGWCC	3 cut(s)	1184, 1604, 2139
BmgBI	CACGTC	1 cut(s)	1131
BmgT120I	GGNCC	4 cut(s)	1184, 1604, 2059, 2139
BmiI	GGNNCC	1 cut(s)	2141
BmrFI	CCNGG	3 cut(s)	1116, 1638, 1682
BmrI	ACTGGG	2 cut(s)	303, 664
BmsI	GCATC	7 cut(s)	94, 152, 310, 1148, 1248, 1318, 1813
BmuI	ACTGGG	2 cut(s)	303, 664
BoxI	GACNNNNGTC	1 cut(s)	401
BpiI	GAAGAC	2 cut(s)	909, 1590
BpmI	CTGGAG	1 cut(s)	200
BpuEI	CTTGAG	3 cut(s)	492, 782, 2021
BsaAI	YACGTR	2 cut(s)	1051, 1123
BsaBI	GATNNNNATC	1 cut(s)	2129
BsaHI	GRCGYC	1 cut(s)	1289
BsaJI	CCNNGG	7 cut(s)	217, 228, 1062, 1655, 1661, 1839, 2062
BsaWI	WCCGGW	1 cut(s)	598
BsaXI	ACNNNNNCTCC	4 cut(s)	1961, 1991, 2014, 2044
Bsc4I	CCNNNNNNNGG	6 cut(s)	72, 674, 675, 713, 1039, 1548
Bse1I	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
Bse21I	CCTNAGG	1 cut(s)	1263
Bse3DI	GCAATG	2 cut(s)	185, 1511
Bse8I	GATNNNNATC	1 cut(s)	2129
BseAI	TCCGGA	1 cut(s)	598
BseBI	CCWGG	3 cut(s)	1116, 1638, 1682
BseDI	CCNNGG	7 cut(s)	217, 228, 1062, 1655, 1661, 1839, 2062
BseGI	GGATG	5 cut(s)	371, 767, 918, 1072, 2130
BseJI	GATNNNNATC	1 cut(s)	2129
BseLI	CCNNNNNNNGG	6 cut(s)	72, 674, 675, 713, 1039, 1548
BseMI	GCAATG	2 cut(s)	185, 1511
BseMII	CTCAG	5 cut(s)	20, 342, 1245, 1254, 1691
BseNI	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
BseRI	GAGGAG	1 cut(s)	1503
BseXI	GCAGC	4 cut(s)	207, 884, 2001, 2170
BseYI	CCCAGC	2 cut(s)	517, 1887
BsgI	GTGCAG	2 cut(s)	981, 1750
BshFI	GGCC	2 cut(s)	1660, 2060
BsiHKAI	GWGCWC	1 cut(s)	1517
BsiSI	CCGG	1 cut(s)	599
BslFI	GGGAC	6 cut(s)	22, 604, 777, 1679, 1821, 2125
BslI	CCNNNNNNNGG	6 cut(s)	72, 674, 675, 713, 1039, 1548
BsmAI	GTCTC	2 cut(s)	1398, 1637
BsmFI	GGGAC	6 cut(s)	22, 604, 777, 1679, 1821, 2125
BsmI	GAATGC	3 cut(s)	717, 733, 1991
BsnI	GGCC	2 cut(s)	1660, 2060
Bsp1286I	GDGCHC	2 cut(s)	94, 1517
Bsp13I	TCCGGA	1 cut(s)	598
Bsp1407I	TGTACA	2 cut(s)	433, 878
Bsp143I	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
Bsp19I	CCATGG	1 cut(s)	228
BspACI	CCGC	2 cut(s)	422, 1799
BspANI	GGCC	2 cut(s)	1660, 2060
BspCNI	CTCAG	5 cut(s)	21, 343, 1246, 1255, 1692
BspEI	TCCGGA	1 cut(s)	598
BspLI	GGNNCC	1 cut(s)	2141
BspMAI	CTGCAG	1 cut(s)	2160
BspPI	GGATC	5 cut(s)	206, 317, 1692, 1867, 1888
BsrDI	GCAATG	2 cut(s)	185, 1511
BsrGI	TGTACA	2 cut(s)	433, 878
BsrI	ACTGG	7 cut(s)	183, 298, 670, 718, 1134, 1282, 1607
BssECI	CCNNGG	7 cut(s)	217, 228, 1062, 1655, 1661, 1839, 2062
BssMI	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
BssNI	GRCGYC	1 cut(s)	1289
BssT1I	CCWWGG	5 cut(s)	217, 228, 1062, 1655, 1839
Bst2UI	CCWGG	3 cut(s)	1116, 1638, 1682
Bst4CI	ACNGT	8 cut(s)	134, 341, 348, 359, 548, 686, 1019, 2184
Bst6I	CTCTTC	1 cut(s)	1619
BstACI	GRCGYC	1 cut(s)	1289
BstAPI	GCANNNNNTGC	1 cut(s)	25
BstAUI	TGTACA	2 cut(s)	433, 878
BstBAI	YACGTR	2 cut(s)	1051, 1123
BstC8I	GCNNGC	5 cut(s)	388, 608, 1159, 1797, 1853
BstDEI	CTNAG	6 cut(s)	29, 351, 1254, 1263, 1700, 1791
BstDSI	CCRYGG	2 cut(s)	228, 2062
BstF5I	GGATG	5 cut(s)	371, 767, 918, 1072, 2130
BstKTI	GATC	8 cut(s)	214, 312, 1027, 1474, 1687, 1862, 1883, 2007
BstMAI	GTCTC	2 cut(s)	1398, 1637
BstMBI	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
BstMWI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
BstNI	CCWGG	3 cut(s)	1116, 1638, 1682
BstNSI	RCATGY	3 cut(s)	1771, 1799, 1855
BstPAI	GACNNNNGTC	1 cut(s)	401
BstSCI	CCNGG	3 cut(s)	1114, 1636, 1680
BstSFI	CTRYAG	2 cut(s)	1323, 2156
BstV1I	GCAGC	4 cut(s)	207, 884, 2001, 2170
BstV2I	GAAGAC	2 cut(s)	909, 1590
BstX2I	RGATCY	3 cut(s)	309, 1024, 1859
BstYI	RGATCY	3 cut(s)	309, 1024, 1859
Bsu36I	CCTNAGG	1 cut(s)	1263
BsuI	GTATCC	1 cut(s)	1425
BsuRI	GGCC	2 cut(s)	1660, 2060
BtgI	CCRYGG	2 cut(s)	228, 2062
BtrI	CACGTC	1 cut(s)	1131
BtsCI	GGATG	5 cut(s)	371, 767, 918, 1072, 2130
BtsI	GCAGTG	2 cut(s)	1742, 1899
BtsIMutI	CAGTG	7 cut(s)	176, 311, 459, 691, 1141, 1742, 1899
Cac8I	GCNNGC	5 cut(s)	388, 608, 1159, 1797, 1853
CaiI	CAGNNNCTG	3 cut(s)	293, 1396, 2155
Cfr13I	GGNCC	4 cut(s)	1184, 1604, 2059, 2139
CseI	GACGC	1 cut(s)	125
CsiI	ACCWGGT	2 cut(s)	1114, 1636
Csp6I	GTAC	3 cut(s)	355, 434, 879
CspCI	CAANNNNNGTGG	2 cut(s)	1914, 1949
CviQI	GTAC	3 cut(s)	355, 434, 879
DdeI	CTNAG	6 cut(s)	29, 351, 1254, 1263, 1700, 1791
DpnI	GATC	8 cut(s)	213, 311, 1026, 1473, 1686, 1861, 1882, 2006
DpnII	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
DraI	TTTAAA	1 cut(s)	450
DraIII	CACNNNGTG	1 cut(s)	25
Eam1104I	CTCTTC	1 cut(s)	1619
EarI	CTCTTC	1 cut(s)	1619
Ecl136II	GAGCTC	1 cut(s)	1515
Eco130I	CCWWGG	5 cut(s)	217, 228, 1062, 1655, 1839
Eco24I	GRGCYC	2 cut(s)	94, 1517
Eco32I	GATATC	2 cut(s)	1539, 2131
Eco47I	GGWCC	3 cut(s)	1184, 1604, 2139
Eco53kI	GAGCTC	1 cut(s)	1515
Eco57I	CTGAAG	3 cut(s)	101, 743, 1584
Eco72I	CACGTG	1 cut(s)	1123
Eco81I	CCTNAGG	1 cut(s)	1263
EcoICRI	GAGCTC	1 cut(s)	1515
EcoRII	CCWGG	3 cut(s)	1114, 1636, 1680
EcoRV	GATATC	2 cut(s)	1539, 2131
EcoT14I	CCWWGG	5 cut(s)	217, 228, 1062, 1655, 1839
EcoT38I	GRGCYC	2 cut(s)	94, 1517
ErhI	CCWWGG	5 cut(s)	217, 228, 1062, 1655, 1839
FalI	AAGNNNNNCTT	2 cut(s)	1193, 1225
FaqI	GGGAC	6 cut(s)	22, 604, 777, 1679, 1821, 2125
FbaI	TGATCA	1 cut(s)	1471
Fnu4HI	GCNGC	4 cut(s)	196, 898, 1990, 2159
FokI	GGATG	5 cut(s)	378, 754, 925, 1079, 2137
FriOI	GRGCYC	2 cut(s)	94, 1517
Fsp4HI	GCNGC	4 cut(s)	196, 898, 1990, 2159
FspBI	CTAG	9 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1856
GluI	GCNGC	4 cut(s)	196, 898, 1990, 2159
GsaI	CCCAGC	2 cut(s)	521, 1891
GsuI	CTGGAG	1 cut(s)	200
HaeIII	GGCC	2 cut(s)	1660, 2060
HapII	CCGG	1 cut(s)	599
HgaI	GACGC	1 cut(s)	125
Hin1I	GRCGYC	1 cut(s)	1289
HincII	GTYRAC	3 cut(s)	985, 1287, 1401
HindII	GTYRAC	3 cut(s)	985, 1287, 1401
HinfI	GANTC	6 cut(s)	764, 790, 1295, 1451, 1739, 1939
HpaII	CCGG	1 cut(s)	599
HphI	GGTGA	6 cut(s)	336, 794, 1546, 1551, 1652, 2078
Hpy166II	GTNNAC	9 cut(s)	344, 660, 879, 985, 1058, 1126, 1287, 1401, 1583
Hpy188III	TCNNGA	8 cut(s)	73, 509, 599, 1316, 1418, 1521, 1602, 1650
Hpy8I	GTNNAC	9 cut(s)	344, 660, 879, 985, 1058, 1126, 1287, 1401, 1583
HpyAV	CCTTC	2 cut(s)	260, 1434
HpyCH4III	ACNGT	8 cut(s)	134, 341, 348, 359, 548, 686, 1019, 2184
HpyCH4IV	ACGT	5 cut(s)	977, 1050, 1122, 1130, 1289
HpyF10VI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
HpyF3I	CTNAG	6 cut(s)	29, 351, 1254, 1263, 1700, 1791
HpySE526I	ACGT	5 cut(s)	977, 1050, 1122, 1130, 1289
Hsp92I	GRCGYC	1 cut(s)	1289
Kpn2I	TCCGGA	1 cut(s)	598
Ksp22I	TGATCA	1 cut(s)	1471
Kzo9I	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
LmnI	GCTCC	3 cut(s)	1705, 1721, 2022
Lsp1109I	GCAGC	4 cut(s)	207, 884, 2001, 2170
LweI	GCATC	7 cut(s)	94, 152, 310, 1148, 1248, 1318, 1813
MabI	ACCWGGT	2 cut(s)	1114, 1636
MaeI	CTAG	9 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1856
MaeII	ACGT	5 cut(s)	977, 1050, 1122, 1130, 1289
MaeIII	GTNAC	6 cut(s)	289, 1118, 1205, 1557, 2050, 2066
MalI	GATC	8 cut(s)	213, 311, 1026, 1473, 1686, 1861, 1882, 2006
MboI	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
MflI	RGATCY	3 cut(s)	309, 1024, 1859
MhlI	GDGCHC	2 cut(s)	94, 1517
MlyI	GAGTC	2 cut(s)	773, 799
MmeI	TCCRAC	4 cut(s)	256, 795, 810, 1130
MroI	TCCGGA	1 cut(s)	598
MseI	TTAA	9 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2042
MslI	CAYNNNNRTG	4 cut(s)	951, 1053, 1504, 2080
MspA1I	CMGCKG	1 cut(s)	386
MspI	CCGG	1 cut(s)	599
MspR9I	CCNGG	3 cut(s)	1116, 1638, 1682
Mva1269I	GAATGC	3 cut(s)	717, 733, 1991
MvaI	CCWGG	3 cut(s)	1116, 1638, 1682
MwoI	GCNNNNNNNGC	3 cut(s)	25, 1328, 1347
NcoI	CCATGG	1 cut(s)	228
NdeII	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
NlaIV	GGNNCC	1 cut(s)	2141
NmeAIII	GCCGAG	1 cut(s)	1686
NmuCI	GTSAC	3 cut(s)	1118, 1557, 2066
NspI	RCATGY	3 cut(s)	1771, 1799, 1855
OliI	CACNNNNGTG	1 cut(s)	1053
PaeI	GCATGC	2 cut(s)	1799, 1855
PciI	ACATGT	1 cut(s)	1767
PctI	GAATGC	3 cut(s)	717, 733, 1991
PfeI	GAWTC	4 cut(s)	1295, 1451, 1739, 1939
PflMI	CCANNNNNTGG	2 cut(s)	72, 713
PfoI	TCCNGGA	1 cut(s)	1680
PkrI	GCNGC	4 cut(s)	197, 899, 1991, 2160
PleI	GAGTC	2 cut(s)	772, 798
PmaCI	CACGTG	1 cut(s)	1123
PmlI	CACGTG	1 cut(s)	1123
PpsI	GAGTC	2 cut(s)	772, 798
Ppu21I	YACGTR	2 cut(s)	1051, 1123
PscI	ACATGT	1 cut(s)	1767
PshAI	GACNNNNGTC	1 cut(s)	401
PshBI	ATTAAT	1 cut(s)	1676
PsiI	TTATAA	1 cut(s)	147
Psp124BI	GAGCTC	1 cut(s)	1517
Psp1406I	AACGTT	1 cut(s)	977
Psp6I	CCWGG	3 cut(s)	1114, 1636, 1680
PspCI	CACGTG	1 cut(s)	1123
PspFI	CCCAGC	2 cut(s)	517, 1887
PspGI	CCWGG	3 cut(s)	1114, 1636, 1680
PspN4I	GGNNCC	1 cut(s)	2141
PspPI	GGNCC	4 cut(s)	1184, 1604, 2059, 2139
PsrI	GAACNNNNNNTAC	2 cut(s)	402, 434
PstI	CTGCAG	1 cut(s)	2160
PstNI	CAGNNNCTG	3 cut(s)	293, 1396, 2155
PsuI	RGATCY	3 cut(s)	309, 1024, 1859
PvuII	CAGCTG	1 cut(s)	386
RsaI	GTAC	3 cut(s)	356, 435, 880
RsaNI	GTAC	3 cut(s)	355, 434, 879
RseI	CAYNNNNRTG	4 cut(s)	951, 1053, 1504, 2080
SacI	GAGCTC	1 cut(s)	1517
SaqAI	TTAA	9 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2042
SatI	GCNGC	4 cut(s)	196, 898, 1990, 2159
Sau3AI	GATC	8 cut(s)	211, 309, 1024, 1471, 1684, 1859, 1880, 2004
Sau96I	GGNCC	4 cut(s)	1184, 1604, 2059, 2139
ScaI	AGTACT	1 cut(s)	356
SchI	GAGTC	2 cut(s)	773, 799
ScrFI	CCNGG	3 cut(s)	1116, 1638, 1682
SduI	GDGCHC	2 cut(s)	94, 1517
SexAI	ACCWGGT	2 cut(s)	1114, 1636
SfaNI	GCATC	7 cut(s)	94, 152, 310, 1148, 1248, 1318, 1813
SfcI	CTRYAG	2 cut(s)	1323, 2156
SinI	GGWCC	3 cut(s)	1184, 1604, 2139
SmiMI	CAYNNNNRTG	4 cut(s)	951, 1053, 1504, 2080
SmlI	CTYRAG	3 cut(s)	507, 761, 2000
SmoI	CTYRAG	3 cut(s)	507, 761, 2000
SphI	GCATGC	2 cut(s)	1799, 1855
SsiI	CCGC	2 cut(s)	422, 1799
SspMI	CTAG	9 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1856
SstI	GAGCTC	1 cut(s)	1517
StyD4I	CCNGG	3 cut(s)	1114, 1636, 1680
StyI	CCWWGG	5 cut(s)	217, 228, 1062, 1655, 1839
TaaI	ACNGT	8 cut(s)	134, 341, 348, 359, 548, 686, 1019, 2184
TaiI	ACGT	5 cut(s)	980, 1053, 1125, 1133, 1292
TaqI	TCGA	2 cut(s)	94, 1883
TatI	WGTACW	3 cut(s)	354, 433, 878
TfiI	GAWTC	4 cut(s)	1295, 1451, 1739, 1939
Tru1I	TTAA	9 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2042
Tru9I	TTAA	9 cut(s)	171, 449, 1008, 1071, 1359, 1611, 1676, 1692, 2042
TscAI	CASTG	7 cut(s)	183, 311, 466, 691, 1141, 1749, 1899
TseFI	GTSAC	3 cut(s)	1118, 1557, 2066
TseI	GCWGC	4 cut(s)	195, 897, 1989, 2158
Tsp45I	GTSAC	3 cut(s)	1118, 1557, 2066
TspDTI	ATGAA	4 cut(s)	1188, 1211, 1286, 1887
TspGWI	ACGGA	2 cut(s)	65, 2069
TspRI	CASTG	7 cut(s)	183, 311, 466, 691, 1141, 1749, 1899
Van91I	CCANNNNNTGG	2 cut(s)	72, 713
VpaK11BI	GGWCC	3 cut(s)	1184, 1604, 2139
VspI	ATTAAT	1 cut(s)	1676
XapI	RAATTY	2 cut(s)	577, 613
XbaI	TCTAGA	1 cut(s)	1649
XceI	RCATGY	3 cut(s)	1771, 1799, 1855
XmaJI	CCTAGG	1 cut(s)	1655
XspI	CTAG	9 cut(s)	224, 537, 1278, 1428, 1569, 1632, 1650, 1656, 1856
ZraI	GACGTC	1 cut(s)	1290
ZrmI	AGTACT	1 cut(s)	356

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.