Prupe.8G233000_v2.0.a1

Guanylate-binding protein

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp08
Physical Location & Seq
Reverse (-)
20679963 .. 20686826
6864 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.8G233000.2

Sequence Viewer

Length: 1809 bp
ATGGAGATTTCTTATTGGGTTTGTGTTGTTTCGATAGTTCTCTGCTTTTTCGCATCTGGGTCTCTCTCAATTGAGAATTTTCACCAAGCATTTCCTATTGTGGAACCAGATCCTGGTCATACAAAACTTCGTCTTTCAAGGGAAGGGCTGGAGGCCATTGAAAGAATAACAACTCCAATTGCAGCTGTTGCCGTTATTGGGCCATATCGCTCTGGAAAATCATTTTTGCTCAACCAACTGCTCTCCCTTTCATGTTATGAAGGGTTTGGTGTTGGACACATGCGTGACACAAAGACAAAAGGAATTTGGGTATGGGGAACCCCAGTAGAAATGGATATTAATGGAGTAAAAACTTCTGTGTTTTATCTTGATACTGAGGGATTTGAAAGTGTTGGGAAGTCAAACGTATATGATGACCGGATTTTTGCTCTGGCAACTGTCATGAGTTCAGTCCTTGTTTATAACCTGGCTGAGACGATCCGCGAAGCTGACATTGCTCGGTTGTCATTTGCTGTTGAGCTTGCTGAAGAATTTTATGGAAGAGTGAAGGGACAAGATGTTGCTTTTGAACCTGCAAAGCTCTTGTGGCTTATCCAGCGTGATTTTTTGCAAGGGAAATCTGTGGAAGACATGGTGCATGAAGCTCTCCTTCATGTCCCTAACAGTGATGGCAACAAGAATATTGATATGGTCAACCAGATCCGAGATTCTTTGGCTATTATGGGTGATAATAGCACAGCCTTCAGTTTACCACAACCTCACCTTCAACGAACTAAACTCTGTGACATGAAGGATGGTGAACTTGACCCGATGTATGTTAAAAAAAAGGAACAACTAAAACAACTTGTTGCTAGTATCATCCGTCCAAAGATTGTGCAGGGAAGACCTCTAAACGGAAAGGAGTTTGTATCTTTTCTGGAGCAGATTCTTGAAGCCTTGAACAAGGGGGAGATCCCATCAACAGGCTCTCTGGTGGAGGTATTCAACAAGGGTATTCTTGAGCGATGTTTAAAGCTATACAATGAAAGGATGGCAAAATTGAGTTTACCTCTTATAGAGCAATCTTTGCAAGAATACCATGAAAGGTCCATGGAGGAAGTGATGAAACTTTTTGAGGAGCAACATTTTGGCCGTCACCATGCAAAGAAATCAGTCGAGCAACTAGAAGAAGAAATAGAAAAGGTGCATAAAAATGTGATCATGACAAATGAATATCGGTCTTCAAAGCTCTGTGAGGCATTGTATACCAGATGTGAGGATAAAATGGACCAACTTCAAGTTCTCAGACTTCCTTCCATGGCAAAATTCAATGCAGGATTCCTGCAGTGCAACCAAAGTTTTGAGCAAGAGTGTGTTGGACCTGCAAAAACAAACTACGGGCATCGAATGATGAAGATGTTGGGTAAGTCACGGTCTCTATTTATAAAAGAATACAATCACAGGCTCTTCAATTGGTTGGTCGCCTTCTCCCTTGTCATGGTGGTCGTTGGCAGGTTTATTATAAAGTTTATTTTGATCGAAATCGGGGCCTGGGTCCTCTTCATCTTCTTAGAGACATACACGAGGATGTTTTGGTCTGCAGAATCTCTTTACTACAACCCGGTTTGGCATGTAATAGTGGCCACTTGGGAAACACTTGTTTACAGCCCCGTCCTTGATCTGGACAGATGGGCTATACCAGCTGGTGTCATAGTAGCTCTGTTTGTACTATATTGGCGGTGTAACGGAAGAAGGAAACACGGGTCTTCATGGTTATTACCTCTGTACAATAATAACAAAGGCGGTCCGAATCGGCCAAGATCAGACTAA

Protein Analysis

603

Amino Acids

68.97

Weight (kDa)

6.75

Isoelectric Point (pI)

40.48

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 462, 1424, 1502
Acc36I ACCTGC 3 cut(s) 580, 1369, 1482
AccB7I CCANNNNNTGG 1 cut(s) 113
AccI GTMKAC 1 cut(s) 1244
AccII CGCG 1 cut(s) 483
AciI CCGC 3 cut(s) 481, 1717, 1782
AclWI GGATC 4 cut(s) 104, 472, 694, 946
AcoI YGGCCR 3 cut(s) 1129, 1620, 1793
AcsI RAATTY 4 cut(s) 76, 303, 530, 1304
AcuI CTGAAG 2 cut(s) 546, 727
AfaI GTAC 2 cut(s) 1707, 1766
AfiI CCNNNNNNNGG 6 cut(s) 113, 198, 893, 962, 1477, 1660
AjnI CCWGG 3 cut(s) 112, 465, 1529
AjuI GAANNNNNNNTTGG 2 cut(s) 1263, 1295
AleI CACNNNNGTG 1 cut(s) 282
AluBI AGCT 9 cut(s) 185, 488, 520, 580, 644, 1015, 1228, 1682, 1697
AluI AGCT 9 cut(s) 185, 488, 520, 580, 644, 1015, 1228, 1682, 1697
Alw26I GTCTC 4 cut(s) 66, 467, 1419, 1547
AlwI GGATC 4 cut(s) 104, 472, 694, 946
AlwNI CAGNNNCTG 1 cut(s) 113
AoxI GGCC 6 cut(s) 153, 200, 1129, 1527, 1620, 1793
ApeKI GCWGC 1 cut(s) 182
ApoI RAATTY 4 cut(s) 76, 303, 530, 1304
ArsI GACNNNNNNTTYG 2 cut(s) 407, 439
AseI ATTAAT 1 cut(s) 339
AspS9I GGNCC 7 cut(s) 200, 1086, 1267, 1358, 1527, 1534, 1784
AsuC2I CCSGG 1 cut(s) 1601
AsuHPI GGTGA 5 cut(s) 74, 737, 752, 809, 1127
AvaII GGWCC 5 cut(s) 1086, 1267, 1358, 1534, 1784
BalI TGGCCA 1 cut(s) 1622
BauI CACGAG 1 cut(s) 1561
BbsI GAAGAC 4 cut(s) 633, 889, 1212, 1737
BbvI GCAGC 1 cut(s) 194
BccI CCATC 5 cut(s) 662, 788, 964, 1024, 1662
BceAI ACGGC 2 cut(s) 176, 1116
BciT130I CCWGG 3 cut(s) 114, 467, 1531
BclI TGATCA 1 cut(s) 1197
BcnI CCSGG 1 cut(s) 1601
BcoDI GTCTC 4 cut(s) 66, 467, 1419, 1547
BfaI CTAG 2 cut(s) 852, 1163
BfmI CTRYAG 2 cut(s) 1322, 1578
BfuAI ACCTGC 3 cut(s) 580, 1369, 1482
BisI GCNGC 1 cut(s) 183
BlsI GCNGC 1 cut(s) 184
Bme1390I CCNGG 4 cut(s) 114, 467, 1531, 1601
Bme18I GGWCC 5 cut(s) 1086, 1267, 1358, 1534, 1784
BmgT120I GGNCC 7 cut(s) 200, 1086, 1267, 1358, 1527, 1534, 1784
BmiI GGNNCC 4 cut(s) 105, 319, 1528, 1535
BmrFI CCNGG 4 cut(s) 114, 467, 1531, 1601
BmrI ACTGGG 1 cut(s) 317
BmsI GCATC 2 cut(s) 62, 1390
BmuI ACTGGG 1 cut(s) 317
BpiI GAAGAC 4 cut(s) 633, 889, 1212, 1737
BplI GAGNNNNNCTC 2 cut(s) 1033, 1065
BpmI CTGGAG 2 cut(s) 170, 938
BpuEI CTTGAG 1 cut(s) 1019
BpuMI CCSGG 1 cut(s) 1601
BsaBI GATNNNNATC 1 cut(s) 1520
BsaI GGTCTC 2 cut(s) 66, 1419
BsaJI CCNNGG 3 cut(s) 1089, 1296, 1530
BsaWI WCCGGW 1 cut(s) 417
Bsc4I CCNNNNNNNGG 6 cut(s) 113, 198, 893, 962, 1477, 1660
Bse1I ACTGG 1 cut(s) 323
Bse3DI GCAATG 1 cut(s) 492
Bse8I GATNNNNATC 1 cut(s) 1520
BseBI CCWGG 3 cut(s) 114, 467, 1531
BseDI CCNNGG 3 cut(s) 1089, 1296, 1530
BseGI GGATG 4 cut(s) 799, 858, 1035, 1572
BseJI GATNNNNATC 1 cut(s) 1520
BseLI CCNNNNNNNGG 6 cut(s) 113, 198, 893, 962, 1477, 1660
BseMI GCAATG 1 cut(s) 492
BseMII CTCAG 3 cut(s) 366, 462, 1297
BseNI ACTGG 1 cut(s) 323
BseRI GAGGAG 1 cut(s) 1130
BseXI GCAGC 1 cut(s) 194
BsgI GTGCAG 1 cut(s) 896
Bsh1236I CGCG 1 cut(s) 483
BshFI GGCC 6 cut(s) 155, 202, 1131, 1529, 1622, 1795
BsiSI CCGG 2 cut(s) 418, 1601
BslFI GGGAC 2 cut(s) 564, 641
BslI CCNNNNNNNGG 6 cut(s) 113, 198, 893, 962, 1477, 1660
BsmAI GTCTC 4 cut(s) 66, 467, 1419, 1547
BsmBI CGTCTC 1 cut(s) 467
BsmFI GGGAC 2 cut(s) 564, 641
BsnI GGCC 6 cut(s) 155, 202, 1131, 1529, 1622, 1795
Bso31I GGTCTC 2 cut(s) 66, 1419
Bsp1407I TGTACA 1 cut(s) 1764
Bsp143I GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
Bsp19I CCATGG 2 cut(s) 1089, 1296
BspACI CCGC 3 cut(s) 481, 1717, 1782
BspANI GGCC 6 cut(s) 155, 202, 1131, 1529, 1622, 1795
BspCNI CTCAG 3 cut(s) 367, 463, 1296
BspFNI CGCG 1 cut(s) 483
BspHI TCATGA 2 cut(s) 441, 1200
BspLI GGNNCC 4 cut(s) 105, 319, 1528, 1535
BspMAI CTGCAG 2 cut(s) 1326, 1582
BspMI ACCTGC 3 cut(s) 580, 1369, 1482
BspPI GGATC 4 cut(s) 104, 472, 694, 946
BspQI GCTCTTC 1 cut(s) 1451
BspTNI GGTCTC 2 cut(s) 66, 1419
BsrDI GCAATG 1 cut(s) 492
BsrGI TGTACA 1 cut(s) 1764
BsrI ACTGG 1 cut(s) 323
BssECI CCNNGG 3 cut(s) 1089, 1296, 1530
BssMI GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
BssNAI GTATAC 1 cut(s) 1245
BssSI CACGAG 1 cut(s) 1561
BssT1I CCWWGG 2 cut(s) 1089, 1296
Bst1107I GTATAC 1 cut(s) 1245
Bst2BI CACGAG 1 cut(s) 1561
Bst2UI CCWGG 3 cut(s) 114, 467, 1531
Bst4CI ACNGT 3 cut(s) 439, 665, 1413
Bst6I CTCTTC 3 cut(s) 535, 1451, 1544
BstAPI GCANNNNNTGC 2 cut(s) 188, 1066
BstAUI TGTACA 1 cut(s) 1764
BstC8I GCNNGC 1 cut(s) 522
BstDEI CTNAG 4 cut(s) 375, 471, 1283, 1549
BstDSI CCRYGG 2 cut(s) 1089, 1296
BstF5I GGATG 4 cut(s) 799, 858, 1035, 1572
BstFNI CGCG 1 cut(s) 483
BstKTI GATC 8 cut(s) 112, 480, 702, 954, 1200, 1518, 1660, 1802
BstMAI GTCTC 4 cut(s) 66, 467, 1419, 1547
BstMBI GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
BstMWI GCNNNNNNNGC 6 cut(s) 188, 494, 586, 595, 1066, 1679
BstNI CCWGG 3 cut(s) 114, 467, 1531
BstNSI RCATGY 2 cut(s) 283, 1613
BstSCI CCNGG 4 cut(s) 112, 465, 1529, 1599
BstSFI CTRYAG 2 cut(s) 1322, 1578
BstUI CGCG 1 cut(s) 483
BstV1I GCAGC 1 cut(s) 194
BstV2I GAAGAC 4 cut(s) 633, 889, 1212, 1737
BstX2I RGATCY 3 cut(s) 109, 699, 951
BstYI RGATCY 3 cut(s) 109, 699, 951
BstZ17I GTATAC 1 cut(s) 1245
BsuRI GGCC 6 cut(s) 155, 202, 1131, 1529, 1622, 1795
BtgI CCRYGG 2 cut(s) 1089, 1296
BtgZI GCGATG 1 cut(s) 1018
BtsCI GGATG 4 cut(s) 799, 858, 1035, 1572
BtsI GCAGTG 1 cut(s) 1331
BtsIMutI CAGTG 2 cut(s) 670, 1331
BveI ACCTGC 3 cut(s) 580, 1369, 1482
Cac8I GCNNGC 1 cut(s) 522
CaiI CAGNNNCTG 1 cut(s) 113
CciI TCATGA 2 cut(s) 441, 1200
Cfr13I GGNCC 7 cut(s) 200, 1086, 1267, 1358, 1527, 1534, 1784
CpoI CGGWCCG 1 cut(s) 1784
Csp6I GTAC 2 cut(s) 1706, 1765
CspI CGGWCCG 1 cut(s) 1784
CviQI GTAC 2 cut(s) 1706, 1765
DdeI CTNAG 4 cut(s) 375, 471, 1283, 1549
DpnI GATC 8 cut(s) 111, 479, 701, 953, 1199, 1517, 1659, 1801
DpnII GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
DraI TTTAAA 1 cut(s) 1011
EaeI YGGCCR 3 cut(s) 1129, 1620, 1793
Eam1104I CTCTTC 3 cut(s) 535, 1451, 1544
EarI CTCTTC 3 cut(s) 535, 1451, 1544
Eco130I CCWWGG 2 cut(s) 1089, 1296
Eco31I GGTCTC 2 cut(s) 66, 1419
Eco47I GGWCC 5 cut(s) 1086, 1267, 1358, 1534, 1784
Eco57I CTGAAG 2 cut(s) 546, 727
EcoO109I RGGNCCY 2 cut(s) 1527, 1534
EcoRII CCWGG 3 cut(s) 112, 465, 1529
EcoT14I CCWWGG 2 cut(s) 1089, 1296
ErhI CCWWGG 2 cut(s) 1089, 1296
Esp3I CGTCTC 1 cut(s) 467
FalI AAGNNNNNCTT 2 cut(s) 633, 665
FaqI GGGAC 2 cut(s) 564, 641
FbaI TGATCA 1 cut(s) 1197
FblI GTMKAC 1 cut(s) 1244
Fnu4HI GCNGC 1 cut(s) 183
FokI GGATG 4 cut(s) 806, 845, 1042, 1579
Fsp4HI GCNGC 1 cut(s) 183
FspBI CTAG 2 cut(s) 852, 1163
GluI GCNGC 1 cut(s) 183
GsuI CTGGAG 2 cut(s) 170, 938
HaeIII GGCC 6 cut(s) 155, 202, 1131, 1529, 1622, 1795
HapII CCGG 2 cut(s) 418, 1601
HincII GTYRAC 1 cut(s) 694
HindII GTYRAC 1 cut(s) 694
HinfI GANTC 5 cut(s) 707, 925, 1317, 1583, 1789
HpaII CCGG 2 cut(s) 418, 1601
HphI GGTGA 5 cut(s) 74, 737, 752, 809, 1127
Hpy166II GTNNAC 6 cut(s) 694, 749, 800, 1046, 1245, 1642
Hpy188I TCNGA 4 cut(s) 704, 1286, 1788, 1804
Hpy188III TCNNGA 8 cut(s) 213, 368, 442, 917, 929, 998, 1201, 1661
Hpy8I GTNNAC 6 cut(s) 694, 749, 800, 1046, 1245, 1642
HpyCH4III ACNGT 3 cut(s) 439, 665, 1413
HpyCH4IV ACGT 1 cut(s) 405
HpyF10VI GCNNNNNNNGC 6 cut(s) 188, 494, 586, 595, 1066, 1679
HpyF3I CTNAG 4 cut(s) 375, 471, 1283, 1549
HpySE526I ACGT 1 cut(s) 405
Ksp22I TGATCA 1 cut(s) 1197
Kzo9I GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
LguI GCTCTTC 1 cut(s) 1451
LmnI GCTCC 2 cut(s) 919, 1117
Lsp1109I GCAGC 1 cut(s) 194
LweI GCATC 2 cut(s) 62, 1390
MaeI CTAG 2 cut(s) 852, 1163
MaeII ACGT 1 cut(s) 405
MaeIII GTNAC 5 cut(s) 284, 782, 1133, 1407, 1721
MalI GATC 8 cut(s) 111, 479, 701, 953, 1199, 1517, 1659, 1801
MboI GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
MfeI CAATTG 3 cut(s) 69, 177, 1450
MflI RGATCY 3 cut(s) 109, 699, 951
MlsI TGGCCA 1 cut(s) 1622
MluCI AATT 8 cut(s) 69, 76, 177, 303, 530, 1037, 1304, 1450
MluNI TGGCCA 1 cut(s) 1622
MmeI TCCRAC 2 cut(s) 253, 1336
Mox20I TGGCCA 1 cut(s) 1622
MscI TGGCCA 1 cut(s) 1622
MseI TTAA 3 cut(s) 339, 819, 1010
MslI CAYNNNNRTG 3 cut(s) 282, 1191, 1565
Msp20I TGGCCA 1 cut(s) 1622
MspA1I CMGCKG 2 cut(s) 185, 1682
MspI CCGG 2 cut(s) 418, 1601
MspR9I CCNGG 4 cut(s) 114, 467, 1531, 1601
MunI CAATTG 3 cut(s) 69, 177, 1450
MvaI CCWGG 3 cut(s) 114, 467, 1531
MvnI CGCG 1 cut(s) 483
MwoI GCNNNNNNNGC 6 cut(s) 188, 494, 586, 595, 1066, 1679
NciI CCSGG 1 cut(s) 1601
NcoI CCATGG 2 cut(s) 1089, 1296
NdeII GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
NlaIV GGNNCC 4 cut(s) 105, 319, 1528, 1535
NmuCI GTSAC 4 cut(s) 284, 782, 1133, 1407
NspI RCATGY 2 cut(s) 283, 1613
OliI CACNNNNGTG 1 cut(s) 282
PagI TCATGA 2 cut(s) 441, 1200
PciSI GCTCTTC 1 cut(s) 1451
PfeI GAWTC 5 cut(s) 707, 925, 1317, 1583, 1789
PflMI CCANNNNNTGG 1 cut(s) 113
PkrI GCNGC 1 cut(s) 184
PpuMI RGGWCCY 1 cut(s) 1534
PshBI ATTAAT 1 cut(s) 339
PsiI TTATAA 3 cut(s) 462, 1424, 1502
Psp5II RGGWCCY 1 cut(s) 1534
Psp6I CCWGG 3 cut(s) 112, 465, 1529
PspGI CCWGG 3 cut(s) 112, 465, 1529
PspN4I GGNNCC 4 cut(s) 105, 319, 1528, 1535
PspPI GGNCC 7 cut(s) 200, 1086, 1267, 1358, 1527, 1534, 1784
PspPPI RGGWCCY 1 cut(s) 1534
PstI CTGCAG 2 cut(s) 1326, 1582
PstNI CAGNNNCTG 1 cut(s) 113
PsuI RGATCY 3 cut(s) 109, 699, 951
PvuII CAGCTG 2 cut(s) 185, 1682
RsaI GTAC 2 cut(s) 1707, 1766
RsaNI GTAC 2 cut(s) 1706, 1765
RseI CAYNNNNRTG 3 cut(s) 282, 1191, 1565
Rsr2I CGGWCCG 1 cut(s) 1784
RsrII CGGWCCG 1 cut(s) 1784
SapI GCTCTTC 1 cut(s) 1451
SaqAI TTAA 3 cut(s) 339, 819, 1010
SatI GCNGC 1 cut(s) 183
Sau3AI GATC 8 cut(s) 109, 477, 699, 951, 1197, 1515, 1657, 1799
Sau96I GGNCC 7 cut(s) 200, 1086, 1267, 1358, 1527, 1534, 1784
ScrFI CCNGG 4 cut(s) 114, 467, 1531, 1601
SfaNI GCATC 2 cut(s) 62, 1390
SfcI CTRYAG 2 cut(s) 1322, 1578
SinI GGWCC 5 cut(s) 1086, 1267, 1358, 1534, 1784
SmiMI CAYNNNNRTG 3 cut(s) 282, 1191, 1565
SmlI CTYRAG 1 cut(s) 998
SmoI CTYRAG 1 cut(s) 998
Sse9I AATT 8 cut(s) 69, 76, 177, 303, 530, 1037, 1304, 1450
SsiI CCGC 3 cut(s) 481, 1717, 1782
SspI AATATT 1 cut(s) 682
SspMI CTAG 2 cut(s) 852, 1163
StyD4I CCNGG 4 cut(s) 112, 465, 1529, 1599
StyI CCWWGG 2 cut(s) 1089, 1296
TaaI ACNGT 3 cut(s) 439, 665, 1413
TaiI ACGT 1 cut(s) 408
TaqI TCGA 4 cut(s) 32, 1155, 1384, 1518
TaqII GACCGA 1 cut(s) 1206
TasI AATT 8 cut(s) 69, 76, 177, 303, 530, 1037, 1304, 1450
TatI WGTACW 2 cut(s) 1705, 1764
TfiI GAWTC 5 cut(s) 707, 925, 1317, 1583, 1789
Tru1I TTAA 3 cut(s) 339, 819, 1010
Tru9I TTAA 3 cut(s) 339, 819, 1010
TscAI CASTG 2 cut(s) 670, 1331
TseFI GTSAC 4 cut(s) 284, 782, 1133, 1407
TseI GCWGC 1 cut(s) 182
Tsp45I GTSAC 4 cut(s) 284, 782, 1133, 1407
TspGWI ACGGA 3 cut(s) 851, 909, 1740
TspRI CASTG 2 cut(s) 670, 1331
Van91I CCANNNNNTGG 1 cut(s) 113
VpaK11BI GGWCC 5 cut(s) 1086, 1267, 1358, 1534, 1784
VspI ATTAAT 1 cut(s) 339
XapI RAATTY 4 cut(s) 76, 303, 530, 1304
XceI RCATGY 2 cut(s) 283, 1613
XmiI GTMKAC 1 cut(s) 1244
XspI CTAG 2 cut(s) 852, 1163
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.