pycom03g20260

Guanylate-binding protein

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr3
Physical Location & Seq
Reverse (-)
20769416 .. 20774362
4947 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom03g20260.14

Sequence Viewer

Length: 1836 bp
ATGAAGGCCCCTGCTTCTTCCATGGCGATGTCAAATTGGGTTTTTGTGTTTTCGATTGTTGTCTGCTTTTTCGCATCTGGGTCGCTCGCAATTGAGAATTTTCACCAGGCATTTCCTATTGTGGAACCTGATCGATCTGGTCATACAAAACTTCGTCTTTCAAGGGAAGGGTTGGAGGCCATTGAAAGAATAACAAATCCAATTGCAGCTGTTGCCGTTATTGGACCATACCGCTCTGGAAAATCTTTTTTGCTCAACCAACTGCTCTCCCTTTCTTGTTATGAAGGGTTTGGTGTTGGACACATGCGTGACACAAAAACAAAAGGGATTTGGGTATGGGGAACCCCAATAGAATTGGATATTGACGGAGTGAAAACTTCGGTTTTTTACCTTGATACTGAGGGATTTGAAAGTGTTGGGAAGTCAAACGTATATGATGACCGGATTTTCGCTCTGGCAACTGTTATGAGTTCTGTTCTTGTTTATAATCTGCCTGAGACGATCCGTGAAGCTGACATTGCTAGGTTGTCATTTGCTGTTGAGCTTGCTGAAGAATTTTATGGAAGAGTGAAGGGACAAGATGTTGCTTTTGAACCTGCAAAGTTATTGTGGCTCATCCAGCGTGATTTTTTACAAGGGAAATCTGTGCAACAAATGGTTAATGAAGCTCTTCTTCGCGTCCCTAACAATGATGGCAACAAAAACATTGATATGGTTAACCAGATCGATCGAGATTCTTTGGCTATTATGGGTGATAATAGCACAGCCTTCAGTTTACCACAACCTCACCTTGAGCGAACGAAACTCTGCGACATGAAGGATGGTGAGCTTGACCCGATGTATGTTAAGAAAAAGGAACAACTAAAACAGCTTGTTTCTAGTATCATCCGTCCAAAGATTGTGCAGGGAAAAACTCTAAATGGAAAGGAGTTTGTATCTTTTCTGGAGCAGATTCTTGAAGCGTTGAACAAGGGGGAGATCCCATCAACAGGTTCTCTGGTGGAGGTTTTCAATAAGGGTATTCTTGAGCAATGCTTAAAGCTGTACCATGAAAGGATGGAAATACTCAGTTTACCTCTCGTAGAGCAATCTGTGCAAGAATACCATGAACGGTCCATGGAGGAAGTGATGAAACTTTTTGAGGATCAACATTTTGGCCGTCACCATGCAAAGAAGTCAGTCGAGCAACTTCAAGAAGAAGTAGACAAGGTGTTTAAGAATGTGGTCATGGCAAACGAATATCAATCTTCAAAGCTCTGTGAGGCATTGTATACCAGATGTGAGGATAAAATGGACCGGCTTCAAGTTCTCAGACTTCCTTCCATGGCAAAATTCAACGCAGGTTTCCTGCAGTGCAACCAAAGTTTTGAGCAAGAGTGTGTTGGACCTGCAAAAGAGAACTATGAGGTTCGCATGATGAAGATGTTGGGGAAGTCACGATCTCTATTTATAAAAGAATACAATCACCGACTCTTCAATTGGTTGGTCGCCTTCTCCCTTGTCATGGTGGTCGTTGGCCGGTTTATCATAAAGTTTATATTGATTGAAATCGGGGCCTGGATCATGTTCATCTTCTTAGAGACATACACGAGGATGTTTTGGTCTGCAGAGTCTCTCTACTACAACCCCGTGTGGCATGTAATAGTAGCCACTTGGGAAACACTCGTTTACAGTCCCGTCCTTGATCTGGACAGATGGGCTATTCCAGCCGGTGTCTTGGTAGCTCTGTTCATACTATATTGGCGGTGTTACGGAAGAAGGAAACACGGGTCCGGATGGATCTTACCCTTGTACAATAATCACAAAGGCGGCTCAAATCGCCCGAGATCAGATTGA

Protein Analysis

612

Amino Acids

70.02

Weight (kDa)

6.54

Isoelectric Point (pI)

41.83

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 486, 1451
Acc36I ACCTGC 3 cut(s) 604, 1331, 1396
AccBSI CCGCTC 1 cut(s) 234
AccI GTMKAC 2 cut(s) 1203, 1271
AccII CGCG 1 cut(s) 678
AccIII TCCGGA 1 cut(s) 1772
AciI CCGC 3 cut(s) 232, 1744, 1809
AclWI GGATC 5 cut(s) 496, 973, 1152, 1568, 1787
AcoI YGGCCR 2 cut(s) 1156, 1516
AcsI RAATTY 3 cut(s) 97, 554, 1331
AcuI CTGAAG 2 cut(s) 570, 754
AfaI GTAC 2 cut(s) 1046, 1793
AfiI CCNNNNNNNGG 3 cut(s) 989, 1504, 1687
AjnI CCWGG 2 cut(s) 105, 1556
AleI CACNNNNGTG 1 cut(s) 306
AluBI AGCT 9 cut(s) 209, 512, 544, 668, 829, 871, 1042, 1255, 1724
AluI AGCT 9 cut(s) 209, 512, 544, 668, 829, 871, 1042, 1255, 1724
Alw26I GTCTC 3 cut(s) 491, 1574, 1617
AlwI GGATC 5 cut(s) 496, 973, 1152, 1568, 1787
Ama87I CYCGRG 1 cut(s) 1822
Aor13HI TCCGGA 1 cut(s) 1772
AoxI GGCC 5 cut(s) 6, 177, 1156, 1516, 1554
ApeKI GCWGC 1 cut(s) 206
ApoI RAATTY 3 cut(s) 97, 554, 1331
ArsI GACNNNNNNTTYG 2 cut(s) 431, 463
Asp700I GAANNNNTTC 1 cut(s) 669
AspS9I GGNCC 7 cut(s) 7, 224, 1113, 1294, 1385, 1554, 1770
AsuHPI GGTGA 6 cut(s) 95, 764, 779, 836, 1154, 1457
AvaI CYCGRG 1 cut(s) 1822
AvaII GGWCC 5 cut(s) 224, 1113, 1294, 1385, 1770
BauI CACGAG 1 cut(s) 1588
BbvI GCAGC 1 cut(s) 218
BccI CCATC 6 cut(s) 686, 815, 991, 1051, 1689, 1770
BceAI ACGGC 2 cut(s) 200, 1143
BcgI CGANNNNNNTGC 2 cut(s) 63, 97
BciT130I CCWGG 2 cut(s) 107, 1558
BcoDI GTCTC 3 cut(s) 491, 1574, 1617
BfaI CTAG 2 cut(s) 522, 879
BfmI CTRYAG 2 cut(s) 1349, 1605
BfuAI ACCTGC 3 cut(s) 604, 1331, 1396
BisI GCNGC 2 cut(s) 207, 1810
BlsI GCNGC 2 cut(s) 208, 1811
Bme1390I CCNGG 2 cut(s) 107, 1558
Bme18I GGWCC 5 cut(s) 224, 1113, 1294, 1385, 1770
BmeT110I CYCGRG 1 cut(s) 1822
BmgT120I GGNCC 7 cut(s) 7, 224, 1113, 1294, 1385, 1554, 1770
BmiI GGNNCC 5 cut(s) 9, 126, 343, 1555, 1771
BmrFI CCNGG 2 cut(s) 107, 1558
BmsI GCATC 1 cut(s) 83
BpmI CTGGAG 1 cut(s) 965
BpuEI CTTGAG 2 cut(s) 812, 1046
Bsa29I ATCGAT 2 cut(s) 133, 726
BsaBI GATNNNNATC 1 cut(s) 1547
BsaJI CCNNGG 3 cut(s) 21, 1116, 1323
BsaWI WCCGGW 2 cut(s) 441, 1772
Bsc4I CCNNNNNNNGG 3 cut(s) 989, 1504, 1687
Bse118I RCCGGY 3 cut(s) 1296, 1518, 1709
Bse3DI GCAATG 2 cut(s) 516, 1037
Bse8I GATNNNNATC 1 cut(s) 1547
BseAI TCCGGA 1 cut(s) 1772
BseBI CCWGG 2 cut(s) 107, 1558
BseCI ATCGAT 2 cut(s) 133, 726
BseDI CCNNGG 3 cut(s) 21, 1116, 1323
BseGI GGATG 6 cut(s) 615, 826, 885, 1062, 1599, 1781
BseJI GATNNNNATC 1 cut(s) 1547
BseLI CCNNNNNNNGG 3 cut(s) 989, 1504, 1687
BseMI GCAATG 2 cut(s) 516, 1037
BseMII CTCAG 4 cut(s) 390, 486, 1081, 1324
BseXI GCAGC 1 cut(s) 218
BsgI GTGCAG 1 cut(s) 923
Bsh1236I CGCG 1 cut(s) 678
Bsh1285I CGRYCG 1 cut(s) 730
BshFI GGCC 5 cut(s) 8, 179, 1158, 1518, 1556
BshVI ATCGAT 2 cut(s) 133, 726
BsiEI CGRYCG 1 cut(s) 730
BsiHKCI CYCGRG 1 cut(s) 1822
BsiSI CCGG 5 cut(s) 442, 1297, 1519, 1710, 1773
BslFI GGGAC 3 cut(s) 588, 665, 1659
BslI CCNNNNNNNGG 3 cut(s) 989, 1504, 1687
BsmAI GTCTC 3 cut(s) 491, 1574, 1617
BsmBI CGTCTC 1 cut(s) 491
BsmFI GGGAC 3 cut(s) 588, 665, 1659
BsnI GGCC 5 cut(s) 8, 179, 1158, 1518, 1556
BsoBI CYCGRG 1 cut(s) 1822
Bsp13I TCCGGA 1 cut(s) 1772
Bsp1407I TGTACA 1 cut(s) 1791
Bsp19I CCATGG 3 cut(s) 21, 1116, 1323
BspACI CCGC 3 cut(s) 232, 1744, 1809
BspANI GGCC 5 cut(s) 8, 179, 1158, 1518, 1556
BspCNI CTCAG 4 cut(s) 391, 487, 1080, 1323
BspDI ATCGAT 2 cut(s) 133, 726
BspEI TCCGGA 1 cut(s) 1772
BspFNI CGCG 1 cut(s) 678
BspLI GGNNCC 5 cut(s) 9, 126, 343, 1555, 1771
BspMAI CTGCAG 2 cut(s) 1353, 1609
BspMI ACCTGC 3 cut(s) 604, 1331, 1396
BspPI GGATC 5 cut(s) 496, 973, 1152, 1568, 1787
BspQI GCTCTTC 1 cut(s) 675
BsrBI CCGCTC 1 cut(s) 234
BsrDI GCAATG 2 cut(s) 516, 1037
BsrFI RCCGGY 3 cut(s) 1296, 1518, 1709
BsrGI TGTACA 1 cut(s) 1791
BssAI RCCGGY 3 cut(s) 1296, 1518, 1709
BssECI CCNNGG 3 cut(s) 21, 1116, 1323
BssNAI GTATAC 1 cut(s) 1272
BssSI CACGAG 1 cut(s) 1588
BssT1I CCWWGG 3 cut(s) 21, 1116, 1323
Bst1107I GTATAC 1 cut(s) 1272
Bst2BI CACGAG 1 cut(s) 1588
Bst2UI CCWGG 2 cut(s) 107, 1558
Bst4CI ACNGT 3 cut(s) 463, 1113, 1673
Bst6I CTCTTC 3 cut(s) 559, 675, 1478
BstAPI GCANNNNNTGC 2 cut(s) 212, 1093
BstAUI TGTACA 1 cut(s) 1791
BstC8I GCNNGC 2 cut(s) 87, 546
BstDEI CTNAG 5 cut(s) 399, 495, 1067, 1310, 1576
BstDSI CCRYGG 3 cut(s) 21, 1116, 1323
BstF5I GGATG 6 cut(s) 615, 826, 885, 1062, 1599, 1781
BstFNI CGCG 1 cut(s) 678
BstMAI GTCTC 3 cut(s) 491, 1574, 1617
BstMCI CGRYCG 1 cut(s) 730
BstMWI GCNNNNNNNGC 6 cut(s) 212, 518, 619, 1093, 1706, 1818
BstNI CCWGG 2 cut(s) 107, 1558
BstNSI RCATGY 2 cut(s) 307, 1640
BstSCI CCNGG 2 cut(s) 105, 1556
BstSFI CTRYAG 2 cut(s) 1349, 1605
BstUI CGCG 1 cut(s) 678
BstV1I GCAGC 1 cut(s) 218
BstX2I RGATCY 2 cut(s) 978, 1779
BstYI RGATCY 2 cut(s) 978, 1779
BstZ17I GTATAC 1 cut(s) 1272
Bsu15I ATCGAT 2 cut(s) 133, 726
BsuRI GGCC 5 cut(s) 8, 179, 1158, 1518, 1556
BsuTUI ATCGAT 2 cut(s) 133, 726
BtgI CCRYGG 3 cut(s) 21, 1116, 1323
BtgZI GCGATG 1 cut(s) 41
BtsCI GGATG 6 cut(s) 615, 826, 885, 1062, 1599, 1781
BtsI GCAGTG 1 cut(s) 1358
BtsIMutI CAGTG 1 cut(s) 1358
BveI ACCTGC 3 cut(s) 604, 1331, 1396
Cac8I GCNNGC 2 cut(s) 87, 546
Cfr10I RCCGGY 3 cut(s) 1296, 1518, 1709
Cfr13I GGNCC 7 cut(s) 7, 224, 1113, 1294, 1385, 1554, 1770
ClaI ATCGAT 2 cut(s) 133, 726
CseI GACGC 1 cut(s) 667
Csp6I GTAC 2 cut(s) 1045, 1792
CviQI GTAC 2 cut(s) 1045, 1792
DdeI CTNAG 5 cut(s) 399, 495, 1067, 1310, 1576
EaeI YGGCCR 2 cut(s) 1156, 1516
Eam1104I CTCTTC 3 cut(s) 559, 675, 1478
EarI CTCTTC 3 cut(s) 559, 675, 1478
Eco130I CCWWGG 3 cut(s) 21, 1116, 1323
Eco47I GGWCC 5 cut(s) 224, 1113, 1294, 1385, 1770
Eco57I CTGAAG 2 cut(s) 570, 754
Eco88I CYCGRG 1 cut(s) 1822
EcoO109I RGGNCCY 2 cut(s) 7, 1554
EcoRII CCWGG 2 cut(s) 105, 1556
EcoT14I CCWWGG 3 cut(s) 21, 1116, 1323
ErhI CCWWGG 3 cut(s) 21, 1116, 1323
Esp3I CGTCTC 1 cut(s) 491
FalI AAGNNNNNCTT 2 cut(s) 657, 689
FaqI GGGAC 3 cut(s) 588, 665, 1659
FblI GTMKAC 2 cut(s) 1203, 1271
Fnu4HI GCNGC 2 cut(s) 207, 1810
FokI GGATG 6 cut(s) 602, 833, 872, 1069, 1606, 1788
Fsp4HI GCNGC 2 cut(s) 207, 1810
FspBI CTAG 2 cut(s) 522, 879
GluI GCNGC 2 cut(s) 207, 1810
GsuI CTGGAG 1 cut(s) 965
HaeIII GGCC 5 cut(s) 8, 179, 1158, 1518, 1556
HapII CCGG 5 cut(s) 442, 1297, 1519, 1710, 1773
HgaI GACGC 1 cut(s) 667
HincII GTYRAC 1 cut(s) 718
HindII GTYRAC 1 cut(s) 718
HinfI GANTC 4 cut(s) 734, 952, 1470, 1610
HpaI GTTAAC 1 cut(s) 718
HpaII CCGG 5 cut(s) 442, 1297, 1519, 1710, 1773
HphI GGTGA 6 cut(s) 95, 764, 779, 836, 1154, 1457
Hpy166II GTNNAC 6 cut(s) 718, 776, 1073, 1204, 1272, 1669
Hpy188I TCNGA 2 cut(s) 1313, 1831
Hpy188III TCNNGA 9 cut(s) 237, 731, 944, 956, 1025, 1193, 1437, 1688, 1773
Hpy8I GTNNAC 6 cut(s) 718, 776, 1073, 1204, 1272, 1669
HpyAV CCTTC 8 cut(s) 161, 278, 565, 778, 811, 1329, 1501, 1752
HpyCH4III ACNGT 3 cut(s) 463, 1113, 1673
HpyCH4IV ACGT 1 cut(s) 429
HpyF10VI GCNNNNNNNGC 6 cut(s) 212, 518, 619, 1093, 1706, 1818
HpyF3I CTNAG 5 cut(s) 399, 495, 1067, 1310, 1576
HpySE526I ACGT 1 cut(s) 429
Kpn2I TCCGGA 1 cut(s) 1772
KspAI GTTAAC 1 cut(s) 718
LguI GCTCTTC 1 cut(s) 675
LmnI GCTCC 1 cut(s) 946
Lsp1109I GCAGC 1 cut(s) 218
LweI GCATC 1 cut(s) 83
MaeI CTAG 2 cut(s) 522, 879
MaeII ACGT 1 cut(s) 429
MaeIII GTNAC 4 cut(s) 308, 1160, 1434, 1748
MbiI CCGCTC 1 cut(s) 234
MfeI CAATTG 3 cut(s) 90, 201, 1477
MflI RGATCY 2 cut(s) 978, 1779
MluCI AATT 8 cut(s) 34, 90, 97, 201, 353, 554, 1331, 1477
MlyI GAGTC 2 cut(s) 1464, 1619
MmeI TCCRAC 3 cut(s) 153, 277, 1363
MroI TCCGGA 1 cut(s) 1772
MroXI GAANNNNTTC 1 cut(s) 669
MseI TTAA 5 cut(s) 660, 717, 846, 1037, 1215
MslI CAYNNNNRTG 4 cut(s) 26, 306, 710, 1592
MspA1I CMGCKG 1 cut(s) 209
MspI CCGG 5 cut(s) 442, 1297, 1519, 1710, 1773
MspR9I CCNGG 2 cut(s) 107, 1558
MunI CAATTG 3 cut(s) 90, 201, 1477
MvaI CCWGG 2 cut(s) 107, 1558
MvnI CGCG 1 cut(s) 678
MwoI GCNNNNNNNGC 6 cut(s) 212, 518, 619, 1093, 1706, 1818
NcoI CCATGG 3 cut(s) 21, 1116, 1323
NlaIV GGNNCC 5 cut(s) 9, 126, 343, 1555, 1771
NmuCI GTSAC 3 cut(s) 308, 1160, 1434
NspI RCATGY 2 cut(s) 307, 1640
OliI CACNNNNGTG 1 cut(s) 306
PciSI GCTCTTC 1 cut(s) 675
PdmI GAANNNNTTC 1 cut(s) 669
PfeI GAWTC 2 cut(s) 734, 952
PkrI GCNGC 2 cut(s) 208, 1811
Ple19I CGATCG 1 cut(s) 730
PleI GAGTC 2 cut(s) 1464, 1618
PpsI GAGTC 2 cut(s) 1464, 1618
PsiI TTATAA 2 cut(s) 486, 1451
Psp6I CCWGG 2 cut(s) 105, 1556
PspGI CCWGG 2 cut(s) 105, 1556
PspN4I GGNNCC 5 cut(s) 9, 126, 343, 1555, 1771
PspPI GGNCC 7 cut(s) 7, 224, 1113, 1294, 1385, 1554, 1770
PstI CTGCAG 2 cut(s) 1353, 1609
PsuI RGATCY 2 cut(s) 978, 1779
PvuI CGATCG 1 cut(s) 730
PvuII CAGCTG 1 cut(s) 209
RsaI GTAC 2 cut(s) 1046, 1793
RsaNI GTAC 2 cut(s) 1045, 1792
RseI CAYNNNNRTG 4 cut(s) 26, 306, 710, 1592
SapI GCTCTTC 1 cut(s) 675
SaqAI TTAA 5 cut(s) 660, 717, 846, 1037, 1215
SatI GCNGC 2 cut(s) 207, 1810
Sau96I GGNCC 7 cut(s) 7, 224, 1113, 1294, 1385, 1554, 1770
SchI GAGTC 2 cut(s) 1464, 1619
ScrFI CCNGG 2 cut(s) 107, 1558
SfaNI GCATC 1 cut(s) 83
SfcI CTRYAG 2 cut(s) 1349, 1605
SinI GGWCC 5 cut(s) 224, 1113, 1294, 1385, 1770
SmiMI CAYNNNNRTG 4 cut(s) 26, 306, 710, 1592
SmlI CTYRAG 2 cut(s) 791, 1025
SmoI CTYRAG 2 cut(s) 791, 1025
Sse9I AATT 8 cut(s) 34, 90, 97, 201, 353, 554, 1331, 1477
SsiI CCGC 3 cut(s) 232, 1744, 1809
SspMI CTAG 2 cut(s) 522, 879
StyD4I CCNGG 2 cut(s) 105, 1556
StyI CCWWGG 3 cut(s) 21, 1116, 1323
TaaI ACNGT 3 cut(s) 463, 1113, 1673
TaiI ACGT 1 cut(s) 432
TaqI TCGA 5 cut(s) 53, 133, 726, 730, 1182
TasI AATT 8 cut(s) 34, 90, 97, 201, 353, 554, 1331, 1477
TatI WGTACW 1 cut(s) 1791
TauI GCSGC 1 cut(s) 1812
TfiI GAWTC 2 cut(s) 734, 952
Tru1I TTAA 5 cut(s) 660, 717, 846, 1037, 1215
Tru9I TTAA 5 cut(s) 660, 717, 846, 1037, 1215
TscAI CASTG 1 cut(s) 1358
TseFI GTSAC 3 cut(s) 308, 1160, 1434
TseI GCWGC 1 cut(s) 206
Tsp45I GTSAC 3 cut(s) 308, 1160, 1434
TspGWI ACGGA 4 cut(s) 381, 494, 878, 1767
TspRI CASTG 1 cut(s) 1358
VpaK11BI GGWCC 5 cut(s) 224, 1113, 1294, 1385, 1770
XapI RAATTY 3 cut(s) 97, 554, 1331
XceI RCATGY 2 cut(s) 307, 1640
XmiI GTMKAC 2 cut(s) 1203, 1271
XmnI GAANNNNTTC 1 cut(s) 669
XspI CTAG 2 cut(s) 522, 879
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.