Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0012198

Physical Location & Seq

Genomic Coordinates Forward (+)

5956003 .. 5958243

Gene Structure 2241 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g05950.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2241 bp

ATGTTCAACCTCAGACACAAAGCCCTCCACTTGTTCAAACGCCGTCCCTCCTCCTCCGCTCTTCCATTTTCTTCACTCTCCGCTTCTGACTACCTTAACTACCATCTCGATTCTTTCCTCTCCAACCAGATTCCAACCTTCCAGCATCTCTCTCAATCCCACGCTCTGATCATCACTTCTGCAAACTCAAACAACATCTTCATATGCGCAAAGCTCATCTCTCTCTACGCGTCTCTCTCCAAACCCACTTCTTCCACCAAAGTATTCGCTTCGGTTTCTCCCAAGGATAACTTTCTTTGGAACTCCATAATCAAAACCCATTTCTCCAATGGCGGCTACTCCAAAGCCCTCGTTCTCTTTTTCCAAATGCGGGCTTCGGGTTTTGCTCCTAACCAATTTACTCTTCCAATGGTGGTTTCCTCGTGCGCTGAGTTAATGGTGCTTGACCATGGCAACAATGTTCATGGGTTGGGTAAGAAACTCGGGCTCTTCGCTATTAATTCGGCAGTTGGCTCTTCTTTTGTGTATATGTATTCAAAGTGTGGTCGAATGGAGGATGCATCTCTTATGTTTGATGAAATTACTGTGAGAGATGTGGTTTGTTGGACCGCGCTTATAATTGGGTATGTGCATAATGATGAGAGTGAGAAGGGTTTGGAGTGTCTTTGTGAGATGCACAGGATCGGTGGCATTGGTGAGAGGCCAAATTTCAGAACGTTGGAAGTTGGTCTTCAAGCTTGTGGGTATCTGGGTGCTTTAGTAGAAGGTAGATGCTTGCATGGTTTTGTAGTAAAAAGGGGAATTGGGTGTTCTGGAGCTGTTAAATCTTTGCTTTTGTCCATGTATTCCAGATGCGGGAGACCTGAAGAATCTTATCTTTCATTTTGTGATGTAGAAAATAAAGATGTTATATCTTGGATGTCAGTTATCGGTGTTTATGCTAGATCTGGGTTAATGGATGAATGCTTAAGTTTGTTTTGGGAAATGCAGGAAAGTGATATTTTCCCAGATGAAATTGTTGTCAGTTGCATGCTTTCAGGTTTTAGAAATTCCACAAATATCAATGAAGGAAAGGCCTTCCTAGGATTAGTCACGAGGCAGAATTATGCATCGAGTCAGATGGTTCACAGTGAACTACTGTCCATGTACTGCAAGTTTGAGTTGTTGACTCTTGCCGAGAAGCTCTTCAGCGGAATGCAGCACCAGAACAAAGAGTCGTGTAACACTATGATTTATGGCTATGGTAAGCTGGGACTGCATACAAAATGCATACAACTGTTTAGGAAGATGAGACATCAAGGCATTGAAGCTGATTCTAATAGCTTGGTATCTGTGGTTTCTTCGTGTTTCCAGATGGGAGCAATCCATCTTGGCCGATCACTTCATTGCTTTATAATTAAGGTTTGTATGGATGAAAATGTCTCAGTAGCCAACTCACTCATAGACATGTATGGAAAAAGTGGTTATTTGACTATTGCAAGGAGAATTTTTTCTGTGACACAGAAAGATATTATAACATGGAACTCATTGATCTCATCGTACAATCACAATGGACATTCTTTCGAGGCCATAGACATATATCATAAGATGATTGCAGAAAATTTCATGCCCAACTCAGCAACATTGGTAACAGTGCTTTCAGCTTGCTCTCATCTCGCATCTCTGGAAGAAGGAAAAAAGGTTCATTGTCACATTAAGGAAAGACGTATTGGGAACAATTTATCCCTTGCGACTGCATTAGTTGATATGTATGCAAAATGTGGGGAACTTGAGAAATCAAGAGAATTGTTCAACTCAATGGAAGATAGGGATGCTATTTCTTGGAATGTCATGATCTCAGGTTATGCAACACATGGACGTGCAGAATCTGCAATAGAACTTTACCATGAGATGGAAGATTCAAATGTTAAACCAAACGAACTCACCTTTCTTGCTCTTCTCTCAGCCTGTAATCATTCAGGGCTGGTTGAAGAAGGGAAATATCTGTTTCGTAGAATGCAAGATCTTTCCCTAAACCCAAATTTGAAGCACTATGCTTGTATGGTAGATATTCTTGGCAGGTCTGGTAATCTGCAAGAAGCGGAAGATTTGGTTCTGTCAATGCCCATATCTCCTGACGGTGGTGTGTGGGGATCATTATTAGGTTCCTGTAAGATTCACAATGAAATTGAGTTGGGCGTAAGGGTTGCAAGGCATGCCATAAAATCTCGATCGATCCAGAAAATGATGGCTACTATATAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

747

Amino Acids

83.05

Weight (kDa)

7.14

Isoelectric Point (pI)

48.84

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	96 - 143	4.1e-06	PPR repeat family
PPR_2	PF13041	301 - 348	6.5e-08	PPR repeat family
PPR	PF01535	304 - 334	1.6e-06	PPR repeat
PPR	PF01535	406 - 435	3.9e-06	PPR repeat
PPR_2	PF13041	502 - 550	1.2e-08	PPR repeat family
PPR	PF01535	505 - 534	4.4e-06	PPR repeat
PPR_long	PF17177	521 - 654	1.2e-06	Pentacotripeptide-repeat region of PRORP
PPR_2	PF13041	604 - 650	1.5e-13	PPR repeat family
PPR	PF01535	606 - 636	7.9e-08	PPR repeat

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39952
malus_domestica	MD01G1032300.v1.1 MD15G1322800.v1.1
prunus_persica	Prupe.6G189500_v2.0.a1
pyrus_communis	pycom01g05950 pycom15g28320
rosa_chinensis	RchiOBHm_Chr2g0113061
rosa_laevigata	RLG00000018033
rosa_multiflora	Rmu_sc0005949.1_g000001 Rmu_sc0016776.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130910
rosa_rugosa	Rorug02G0183500 Rorug02G0183600 Rorug02G0183700
rosa_samantha	Rh2AG238700 Rh2BG252500 Rh2CG242700 Rh2DG246700
rosa_wichuraiana	Rw2G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	3 cut(s)	617, 1394, 1514
Acc16I	TGCGCA	1 cut(s)	208
Acc36I	ACCTGC	1 cut(s)	2049
AccB7I	CCANNNNNTGG	1 cut(s)	1891
AccBSI	CCGCTC	1 cut(s)	59
AccII	CGCG	2 cut(s)	230, 611
AciI	CCGC	8 cut(s)	57, 81, 333, 370, 609, 855, 1191, 2081
AclI	AACGTT	1 cut(s)	716
AclWI	GGATC	3 cut(s)	689, 2140, 2209
AcoI	YGGCCR	1 cut(s)	1372
AcsI	RAATTY	5 cut(s)	706, 1048, 1485, 1600, 2020
AcuI	CTGAAG	2 cut(s)	885, 1171
AfaI	GTAC	2 cut(s)	1148, 1541
AfiI	CCNNNNNNNGG	4 cut(s)	370, 855, 1891, 2120
AflII	CTTAAG	1 cut(s)	967
AflIII	ACRYGT	2 cut(s)	228, 1446
AgsI	TTSAA	9 cut(s)	7, 37, 537, 734, 1307, 1792, 1902, 1970, 2026
AjiI	CACGTC	1 cut(s)	1859
AjuI	GAANNNNNNNTTGG	6 cut(s)	387, 400, 419, 432, 1692, 1724
AloI	GAACNNNNNNTCC	4 cut(s)	1665, 1697, 1706, 1738
AluBI	AGCT	8 cut(s)	214, 737, 818, 1183, 1249, 1310, 1323, 1643
AluI	AGCT	8 cut(s)	214, 737, 818, 1183, 1249, 1310, 1323, 1643
Alw26I	GTCTC	4 cut(s)	237, 853, 1285, 1426
AlwI	GGATC	3 cut(s)	689, 2140, 2209
AlwNI	CAGNNNCTG	1 cut(s)	1868
Ama87I	CYCGRG	1 cut(s)	482
AoxI	GGCC	4 cut(s)	701, 1074, 1372, 1566
ApeKI	GCWGC	1 cut(s)	1198
ApoI	RAATTY	5 cut(s)	706, 1048, 1485, 1600, 2020
AseI	ATTAAT	1 cut(s)	498
Asp700I	GAANNNNTTC	2 cut(s)	1184, 1489
AspA2I	CCTAGG	1 cut(s)	1081
AspLEI	GCGC	3 cut(s)	209, 428, 613
AspS9I	GGNCC	1 cut(s)	606
AsuHPI	GGTGA	2 cut(s)	707, 1915
AvaI	CYCGRG	1 cut(s)	482
AvaII	GGWCC	1 cut(s)	606
AvrII	CCTAGG	1 cut(s)	1081
BanII	GRGCYC	1 cut(s)	489
BauI	CACGAG	2 cut(s)	421, 1093
BbsI	GAAGAC	1 cut(s)	722
BbvI	GCAGC	1 cut(s)	1210
BccI	CCATC	6 cut(s)	111, 1114, 1348, 1374, 1885, 2221
BceAI	ACGGC	1 cut(s)	27
BclI	TGATCA	1 cut(s)	168
BcoDI	GTCTC	4 cut(s)	237, 853, 1285, 1426
BfaI	CTAG	2 cut(s)	942, 1082
BfrI	CTTAAG	1 cut(s)	967
BfuAI	ACCTGC	1 cut(s)	2049
BglII	AGATCT	2 cut(s)	944, 2002
BisI	GCNGC	2 cut(s)	334, 1199
BlnI	CCTAGG	1 cut(s)	1081
BlsI	GCNGC	2 cut(s)	335, 1200
Bme18I	GGWCC	1 cut(s)	606
BmeT110I	CYCGRG	1 cut(s)	482
BmgBI	CACGTC	1 cut(s)	1859
BmgT120I	GGNCC	1 cut(s)	606
BmiI	GGNNCC	1 cut(s)	2146
BmsI	GCATC	9 cut(s)	154, 547, 569, 663, 761, 842, 1118, 1667, 1801
BpiI	GAAGAC	1 cut(s)	722
BpmI	CTGGAG	1 cut(s)	834
BpuEI	CTTGAG	1 cut(s)	1790
Bsa29I	ATCGAT	1 cut(s)	2213
BsaI	GGTCTC	1 cut(s)	853
BsaJI	CCNNGG	3 cut(s)	282, 448, 1081
Bsc4I	CCNNNNNNNGG	4 cut(s)	370, 855, 1891, 2120
Bse3DI	GCAATG	1 cut(s)	1384
BseCI	ATCGAT	1 cut(s)	2213
BseDI	CCNNGG	3 cut(s)	282, 448, 1081
BseGI	GGATG	5 cut(s)	562, 924, 964, 1417, 1816
BseLI	CCNNNNNNNGG	4 cut(s)	370, 855, 1891, 2120
BseMI	GCAATG	1 cut(s)	1384
BseMII	CTCAG	6 cut(s)	25, 420, 1437, 1629, 1851, 1956
BseRI	GAGGAG	2 cut(s)	40, 43
BseXI	GCAGC	1 cut(s)	1210
BseYI	CCCAGC	1 cut(s)	1249
BsgI	GTGCAG	1 cut(s)	1881
Bsh1236I	CGCG	2 cut(s)	230, 611
Bsh1285I	CGRYCG	1 cut(s)	2213
BshFI	GGCC	4 cut(s)	703, 1076, 1374, 1568
BshVI	ATCGAT	1 cut(s)	2213
BsiEI	CGRYCG	1 cut(s)	2213
BsiHKCI	CYCGRG	1 cut(s)	482
BslFI	GGGAC	2 cut(s)	30, 1266
BslI	CCNNNNNNNGG	4 cut(s)	370, 855, 1891, 2120
BsmAI	GTCTC	4 cut(s)	237, 853, 1285, 1426
BsmBI	CGTCTC	1 cut(s)	237
BsmFI	GGGAC	2 cut(s)	30, 1266
BsmI	GAATGC	3 cut(s)	968, 1200, 2001
BsnI	GGCC	4 cut(s)	703, 1076, 1374, 1568
Bso31I	GGTCTC	1 cut(s)	853
BsoBI	CYCGRG	1 cut(s)	482
Bsp1286I	GDGCHC	1 cut(s)	489
Bsp19I	CCATGG	1 cut(s)	448
BspACI	CCGC	8 cut(s)	57, 81, 333, 370, 609, 855, 1191, 2081
BspANI	GGCC	4 cut(s)	703, 1076, 1374, 1568
BspCNI	CTCAG	6 cut(s)	24, 421, 1436, 1628, 1850, 1955
BspDI	ATCGAT	1 cut(s)	2213
BspFNI	CGCG	2 cut(s)	230, 611
BspHI	TCATGA	1 cut(s)	1830
BspLI	GGNNCC	1 cut(s)	2146
BspMI	ACCTGC	1 cut(s)	2049
BspPI	GGATC	3 cut(s)	689, 2140, 2209
BspQI	GCTCTTC	5 cut(s)	66, 494, 520, 1190, 1941
BspTI	CTTAAG	1 cut(s)	967
BspTNI	GGTCTC	1 cut(s)	853
BsrBI	CCGCTC	1 cut(s)	59
BsrDI	GCAATG	1 cut(s)	1384
BssECI	CCNNGG	3 cut(s)	282, 448, 1081
BssSI	CACGAG	2 cut(s)	421, 1093
BssT1I	CCWWGG	3 cut(s)	282, 448, 1081
Bst2BI	CACGAG	2 cut(s)	421, 1093
Bst4CI	ACNGT	6 cut(s)	586, 1130, 1140, 1278, 1633, 2120
Bst6I	CTCTTC	6 cut(s)	66, 408, 494, 520, 1190, 1941
BstAFI	CTTAAG	1 cut(s)	967
BstAPI	GCANNNNNTGC	2 cut(s)	1868, 2195
BstC8I	GCNNGC	5 cut(s)	372, 776, 1031, 1645, 2196
BstDEI	CTNAG	6 cut(s)	11, 429, 1423, 1615, 1837, 1942
BstDSI	CCRYGG	1 cut(s)	448
BstF5I	GGATG	5 cut(s)	562, 924, 964, 1417, 1816
BstFNI	CGCG	2 cut(s)	230, 611
BstHHI	GCGC	3 cut(s)	209, 428, 613
BstMAI	GTCTC	4 cut(s)	237, 853, 1285, 1426
BstMCI	CGRYCG	1 cut(s)	2213
BstMWI	GCNNNNNNNGC	3 cut(s)	1255, 1868, 2195
BstNSI	RCATGY	3 cut(s)	1033, 1450, 2198
BstUI	CGCG	2 cut(s)	230, 611
BstV1I	GCAGC	1 cut(s)	1210
BstV2I	GAAGAC	1 cut(s)	722
BstX2I	RGATCY	2 cut(s)	944, 2002
BstYI	RGATCY	2 cut(s)	944, 2002
Bsu15I	ATCGAT	1 cut(s)	2213
BsuRI	GGCC	4 cut(s)	703, 1076, 1374, 1568
BsuTUI	ATCGAT	1 cut(s)	2213
BtgI	CCRYGG	1 cut(s)	448
BtrI	CACGTC	1 cut(s)	1859
BtsCI	GGATG	5 cut(s)	562, 924, 964, 1417, 1816
BtsIMutI	CAGTG	2 cut(s)	1135, 1638
BveI	ACCTGC	1 cut(s)	2049
Cac8I	GCNNGC	5 cut(s)	372, 776, 1031, 1645, 2196
CaiI	CAGNNNCTG	1 cut(s)	1868
CciI	TCATGA	1 cut(s)	1830
CfoI	GCGC	3 cut(s)	209, 428, 613
Cfr13I	GGNCC	1 cut(s)	606
ClaI	ATCGAT	1 cut(s)	2213
CseI	GACGC	1 cut(s)	219
Csp6I	GTAC	2 cut(s)	1147, 1540
CviQI	GTAC	2 cut(s)	1147, 1540
DdeI	CTNAG	6 cut(s)	11, 429, 1423, 1615, 1837, 1942
EaeI	YGGCCR	1 cut(s)	1372
Eam1104I	CTCTTC	6 cut(s)	66, 408, 494, 520, 1190, 1941
EarI	CTCTTC	6 cut(s)	66, 408, 494, 520, 1190, 1941
Eco130I	CCWWGG	3 cut(s)	282, 448, 1081
Eco147I	AGGCCT	1 cut(s)	1076
Eco24I	GRGCYC	1 cut(s)	489
Eco31I	GGTCTC	1 cut(s)	853
Eco47I	GGWCC	1 cut(s)	606
Eco57I	CTGAAG	2 cut(s)	885, 1171
Eco88I	CYCGRG	1 cut(s)	482
EcoT14I	CCWWGG	3 cut(s)	282, 448, 1081
EcoT22I	ATGCAT	3 cut(s)	562, 1111, 1271
EcoT38I	GRGCYC	1 cut(s)	489
ErhI	CCWWGG	3 cut(s)	282, 448, 1081
Esp3I	CGTCTC	1 cut(s)	237
FalI	AAGNNNNNCTT	4 cut(s)	275, 307, 714, 746
FaqI	GGGAC	2 cut(s)	30, 1266
FauI	CCCGC	2 cut(s)	363, 848
FauNDI	CATATG	1 cut(s)	203
FbaI	TGATCA	1 cut(s)	168
Fnu4HI	GCNGC	2 cut(s)	334, 1199
FokI	GGATG	5 cut(s)	569, 931, 971, 1424, 1823
FriOI	GRGCYC	1 cut(s)	489
Fsp4HI	GCNGC	2 cut(s)	334, 1199
FspBI	CTAG	2 cut(s)	942, 1082
FspI	TGCGCA	1 cut(s)	208
GlaI	GCGC	3 cut(s)	208, 427, 612
GluI	GCNGC	2 cut(s)	334, 1199
GsaI	CCCAGC	1 cut(s)	1253
GsuI	CTGGAG	1 cut(s)	834
HaeIII	GGCC	4 cut(s)	703, 1076, 1374, 1568
HgaI	GACGC	1 cut(s)	219
HhaI	GCGC	3 cut(s)	209, 428, 613
Hin6I	GCGC	3 cut(s)	207, 426, 611
HinP1I	GCGC	3 cut(s)	207, 426, 611
HincII	GTYRAC	1 cut(s)	1167
HindII	GTYRAC	1 cut(s)	1167
HindIII	AAGCTT	1 cut(s)	735
HphI	GGTGA	2 cut(s)	707, 1915
Hpy166II	GTNNAC	3 cut(s)	1126, 1133, 1167
Hpy188I	TCNGA	5 cut(s)	14, 88, 168, 713, 1119
Hpy8I	GTNNAC	3 cut(s)	1126, 1133, 1167
HpyAV	CCTTC	7 cut(s)	148, 643, 758, 1061, 1087, 1664, 1967
HpyCH4III	ACNGT	6 cut(s)	586, 1130, 1140, 1278, 1633, 2120
HpyCH4IV	ACGT	3 cut(s)	716, 1705, 1858
HpyF10VI	GCNNNNNNNGC	3 cut(s)	1255, 1868, 2195
HpyF3I	CTNAG	6 cut(s)	11, 429, 1423, 1615, 1837, 1942
HpySE526I	ACGT	3 cut(s)	716, 1705, 1858
HspAI	GCGC	3 cut(s)	207, 426, 611
Ksp22I	TGATCA	1 cut(s)	168
LguI	GCTCTTC	5 cut(s)	66, 494, 520, 1190, 1941
LmnI	GCTCC	3 cut(s)	391, 815, 1358
Lsp1109I	GCAGC	1 cut(s)	1210
LweI	GCATC	9 cut(s)	154, 547, 569, 663, 761, 842, 1118, 1667, 1801
MaeI	CTAG	2 cut(s)	942, 1082
MaeII	ACGT	3 cut(s)	716, 1705, 1858
MaeIII	GTNAC	5 cut(s)	1090, 1220, 1495, 1627, 1688
MbiI	CCGCTC	1 cut(s)	59
MflI	RGATCY	2 cut(s)	944, 2002
MhlI	GDGCHC	1 cut(s)	489
MluI	ACGCGT	1 cut(s)	228
MlyI	GAGTC	3 cut(s)	1123, 1162, 1223
MmeI	TCCRAC	4 cut(s)	147, 158, 584, 699
Mph1103I	ATGCAT	3 cut(s)	562, 1111, 1271
MroXI	GAANNNNTTC	2 cut(s)	1184, 1489
MseI	TTAA	9 cut(s)	96, 434, 498, 822, 953, 968, 1398, 1695, 1908
MslI	CAYNNNNRTG	3 cut(s)	636, 1445, 1857
MspA1I	CMGCKG	1 cut(s)	1191
MspCI	CTTAAG	1 cut(s)	967
Mva1269I	GAATGC	3 cut(s)	968, 1200, 2001
MvnI	CGCG	2 cut(s)	230, 611
MwoI	GCNNNNNNNGC	3 cut(s)	1255, 1868, 2195
NcoI	CCATGG	1 cut(s)	448
NdeI	CATATG	1 cut(s)	203
NlaIV	GGNNCC	1 cut(s)	2146
NmeAIII	GCCGAG	1 cut(s)	1201
NmuCI	GTSAC	3 cut(s)	1090, 1495, 1688
NsbI	TGCGCA	1 cut(s)	208
NsiI	ATGCAT	3 cut(s)	562, 1111, 1271
NspI	RCATGY	3 cut(s)	1033, 1450, 2198
PaeI	GCATGC	2 cut(s)	1033, 2198
PagI	TCATGA	1 cut(s)	1830
PceI	AGGCCT	1 cut(s)	1076
PciI	ACATGT	1 cut(s)	1446
PciSI	GCTCTTC	5 cut(s)	66, 494, 520, 1190, 1941
PctI	GAATGC	3 cut(s)	968, 1200, 2001
PdmI	GAANNNNTTC	2 cut(s)	1184, 1489
PfeI	GAWTC	7 cut(s)	110, 130, 869, 1313, 1865, 1898, 2155
PflMI	CCANNNNNTGG	1 cut(s)	1891
PkrI	GCNGC	2 cut(s)	335, 1200
Ple19I	CGATCG	1 cut(s)	2213
PleI	GAGTC	3 cut(s)	1122, 1162, 1222
PpsI	GAGTC	3 cut(s)	1122, 1162, 1222
PscI	ACATGT	1 cut(s)	1446
PshBI	ATTAAT	1 cut(s)	498
PsiI	TTATAA	3 cut(s)	617, 1394, 1514
Psp1406I	AACGTT	1 cut(s)	716
PspFI	CCCAGC	1 cut(s)	1249
PspN4I	GGNNCC	1 cut(s)	2146
PspPI	GGNCC	1 cut(s)	606
PstNI	CAGNNNCTG	1 cut(s)	1868
PsuI	RGATCY	2 cut(s)	944, 2002
PvuI	CGATCG	1 cut(s)	2213
RsaI	GTAC	2 cut(s)	1148, 1541
RsaNI	GTAC	2 cut(s)	1147, 1540
RseI	CAYNNNNRTG	3 cut(s)	636, 1445, 1857
SapI	GCTCTTC	5 cut(s)	66, 494, 520, 1190, 1941
SaqAI	TTAA	9 cut(s)	96, 434, 498, 822, 953, 968, 1398, 1695, 1908
SatI	GCNGC	2 cut(s)	334, 1199
Sau96I	GGNCC	1 cut(s)	606
SchI	GAGTC	3 cut(s)	1123, 1162, 1223
SduI	GDGCHC	1 cut(s)	489
SfaNI	GCATC	9 cut(s)	154, 547, 569, 663, 761, 842, 1118, 1667, 1801
SinI	GGWCC	1 cut(s)	606
SmiMI	CAYNNNNRTG	3 cut(s)	636, 1445, 1857
SmlI	CTYRAG	2 cut(s)	967, 1769
SmoI	CTYRAG	2 cut(s)	967, 1769
SphI	GCATGC	2 cut(s)	1033, 2198
SseBI	AGGCCT	1 cut(s)	1076
SsiI	CCGC	8 cut(s)	57, 81, 333, 370, 609, 855, 1191, 2081
SspMI	CTAG	2 cut(s)	942, 1082
StuI	AGGCCT	1 cut(s)	1076
StyI	CCWWGG	3 cut(s)	282, 448, 1081
TaaI	ACNGT	6 cut(s)	586, 1130, 1140, 1278, 1633, 2120
TaiI	ACGT	3 cut(s)	719, 1708, 1861
TaqI	TCGA	6 cut(s)	108, 547, 1112, 1563, 2209, 2213
TatI	WGTACW	1 cut(s)	1146
TauI	GCSGC	1 cut(s)	336
TfiI	GAWTC	7 cut(s)	110, 130, 869, 1313, 1865, 1898, 2155
Tru1I	TTAA	9 cut(s)	96, 434, 498, 822, 953, 968, 1398, 1695, 1908
Tru9I	TTAA	9 cut(s)	96, 434, 498, 822, 953, 968, 1398, 1695, 1908
TscAI	CASTG	2 cut(s)	1135, 1638
TseFI	GTSAC	3 cut(s)	1090, 1495, 1688
TseI	GCWGC	1 cut(s)	1198
Tsp45I	GTSAC	3 cut(s)	1090, 1495, 1688
TspRI	CASTG	2 cut(s)	1135, 1638
Van91I	CCANNNNNTGG	1 cut(s)	1891
Vha464I	CTTAAG	1 cut(s)	967
VpaK11BI	GGWCC	1 cut(s)	606
VspI	ATTAAT	1 cut(s)	498
XapI	RAATTY	5 cut(s)	706, 1048, 1485, 1600, 2020
XceI	RCATGY	3 cut(s)	1033, 1450, 2198
XcmI	CCANNNNNNNNNTGG	1 cut(s)	326
XmaJI	CCTAGG	1 cut(s)	1081
XmnI	GAANNNNTTC	2 cut(s)	1184, 1489
XspI	CTAG	2 cut(s)	942, 1082
Zsp2I	ATGCAT	3 cut(s)	562, 1111, 1271

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.