Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr2A

Orthogroup ID

OG0012198

Physical Location & Seq

Genomic Coordinates Reverse (-)

26048675 .. 26054431

Gene Structure 5757 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh2AG238700.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2334 bp

ATGTTCAGTAAGAAACCCATCCACCTCTTCAAACGCTTTCCCTCCTCTTTTCCATTCTCTTCACTTTCACCTTCCAACTACCTTAACTGTCATCTCCAATCTCTCCTCTCCAACCAAACTTCAACTCTCCCACACCTCTCTCAATCCCACGCTCTCATTATCACTTCTGGAAACTCAAACAACGTTTTCATAGCCTCAAAGCTCGTCTCTTTCTATGCCTCTCTCACCAAACCCGAATCTTCCACCAAAGTATTTGATTCAGTTTGTCCCAAAGACACATTCCTCTGGAACTCCATAATCAAAACCCACTTCTCCAATGGCAGTTACTCCAATGCCCTCCAGTTCTTTACCCAAATGCGAGGCTCCGAGTTGGGTCCCAACCAATTCACTCTTCCAATGGTTGTTGCTTCCTGCGCCGAGTTGAGGTTGCTAGACCATGGAAAGACTGTTCATGGGCTGGCTTCAAAACTCGGCCTTTTCGCAGGGAATCCCGCAGTTGGGTCATCTTTTGTTTACATGTACGCGAAATGTGGTCGAATGGGGGATGCGTGCGTCATGTTCGATGAAATTACTGAGAGAGATGTGGTGTGTTGGACTGCGGTTATAATTGGGTATGTGCAGAATGGTGAGAGTGAGAAGGGTCTGGAATGGCTTTGTGAGATGCATAGGATTGGTGGAGATGTTGAGAGGCCAAATTTTAGGACACTGGAAGTTGGGTTTCAAGCTTGTGTGGATATGGGAGCTATAGGAGAAGGTAGATGTTTACATGGTTTTGTTGTGAAAAGTGGAATTGGATGTTCAGAAGCTGTTAAGTCTTTGATTTTGTCTATGTATTCCAGATGTGGGACACCTGGTGAATCCTTCGTTTTGTTTCGTGAATTAAGAAATAGAGATCTTCTATCATGGACGTCGGTTATTGGTGCTTATGCTAGATCTGGGTTGGTGGCAGAATGCTCGTGCTTATTTTGGGAAATGCAGGATGGTGATATTGTTGCGGATGAAATCCTTGTCAGTTGCATGCTTTCAGGGTTTAGAAATTTGACAAATATCAGGGAAGGAAAGGCATTCCTTGGAATAGTGACAAGGCAAAACTATGGATCAACTCAGATGGTTTATAGTGAACTGGTATCCATGTACTGCAAGTTTGGGTTATTGACTCTTGCAGAGAAGCTTCTTAGTGAAATGCAGCATTGGGACAAAGAGTGTTGTAATAATATGATTTGTGGCTATGCTAAGGTGGGACTGCCTGCAAAATGTATAGAAATTTTTGGGAAGATGCAATGTTTAGGCATTGAAGCTGATTCTAGTAGCTTGGTGTCTATGATTTGTTCATGCTTCCAGTTGGGGGCGATCCATCTTGGTCAATCAGTTCATGGCTACATGATTAAGATTTCGATGGATGACAATGTCTCGGTAGCCAATTCACTCATAGATATGTATGGAAAAAGTGGTTATTTGAACATTGCATTGAGAATTTTTCGTGGGACACATAGAGACATTGTAACATGGAGCACATTGATGTCATCTTACACTCACAATGGAAATTTTTCTGAGGCCATAGTCCTATTTCATAAAATGATCGCAGAGAAGGTGAAGCCCAACTCGGCAACATTTGTAACGGTGCTTTCTGCTTGCTCTCATCTCGCATCTCTTAAAGAAGGAGAGAAAGTTCACTGTCACATTAAGGAAAGAGGAATAGAGATCAATTTGTCCGTTGCTGCTGCATTGGTTGATATGTATGCAAAATGTGGGCAGCTCGAGAAATCTAGAGAACTGTTCAACTCAATGAATGAGAGGGATGCTATTTCCTGGAATGTCATGATCTCAGGTTATGCTATGCACGGACATGCAGAATCTGCAATAGAAATTTTCCACAACATGGAAACTTCAAATGTTAAACCAAATGAAATAACATTCCTTTCTCTTCTTTCAGCCTGTAATCATTCAGGGCTTGTTGAACAAGGGAAGTATCTGTTTGGTAGAATGCAGGAATTTTCTGTAAAGCCCAATTTGAAGCACTATGCTTGTATGGTAGATATTCTTGGAAGGTCTGGAAAACTGCAAGAAGCTAAAGATTTGGTTCTGTCAATGCCCATTACTCCTGATGGTGGTGTATGGGGATCTCTGTTAGCTGCCTGTAAGATTCACAATGAAATTGAAATGGGTGCAAGGGTTGCTAAGCATGCTATAGAATCTGATCCAGAAAATGACGGCTATTATATAATGCTGTCCAACCTGTATAGTTCCATTGGAAGGTGGGATGATGCTATAAGTGTGAGAAAAATGATGCAGGAGAAGGGTGTGGGAAAGACAAATGCATGGAGTGTGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

777

Amino Acids

85.84

Weight (kDa)

6.79

Isoelectric Point (pI)

43.88

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	498 - 546	1.3e-11	PPR repeat family
PPR	PF01535	501 - 529	1.2e-06	PPR repeat
PPR_2	PF13041	600 - 646	2.6e-12	PPR repeat family
PPR	PF01535	602 - 631	1.1e-06	PPR repeat
PPR_3	PF13812	623 - 681	2.7e-06	Pentatricopeptide repeat domain
E_motif	PF20431	716 - 771	3e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39952
malus_domestica	MD01G1032300.v1.1 MD15G1322800.v1.1
prunus_persica	Prupe.6G189500_v2.0.a1
pyrus_communis	pycom01g05950 pycom15g28320
rosa_chinensis	RchiOBHm_Chr2g0113061
rosa_laevigata	RLG00000018033
rosa_multiflora	Rmu_sc0005949.1_g000001 Rmu_sc0016776.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130910
rosa_rugosa	Rorug02G0183500 Rorug02G0183600 Rorug02G0183700
rosa_samantha	Rh2AG238700 Rh2BG252500 Rh2CG242700 Rh2DG246700
rosa_wichuraiana	Rw2G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	605
AatII	GACGTC	1 cut(s)	911
AccB7I	CCANNNNNTGG	1 cut(s)	1879
AccII	CGCG	1 cut(s)	524
AciI	CCGC	3 cut(s)	492, 599, 995
AclI	AACGTT	1 cut(s)	183
AclWI	GGATC	4 cut(s)	1105, 1345, 2128, 2192
AcsI	RAATTY	7 cut(s)	694, 1036, 1263, 1473, 1543, 1866, 1991
AcyI	GRCGYC	1 cut(s)	908
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	2 cut(s)	521, 1136
AfiI	CCNNNNNNNGG	8 cut(s)	423, 497, 498, 843, 1345, 1879, 2108, 2253
AflIII	ACRYGT	1 cut(s)	516
AjnI	CCWGG	2 cut(s)	850, 1808
AjuI	GAANNNNNNNTTGG	4 cut(s)	263, 295, 375, 407
AloI	GAACNNNNNNTCC	4 cut(s)	432, 464, 1653, 1685
Alw21I	GWGCWC	1 cut(s)	1514
Alw26I	GTCTC	3 cut(s)	211, 1414, 1488
AlwI	GGATC	4 cut(s)	1105, 1345, 2128, 2192
AlwNI	CAGNNNCTG	2 cut(s)	806, 1856
Ama87I	CYCGRG	1 cut(s)	1757
AoxI	GGCC	3 cut(s)	472, 689, 1554
ApeKI	GCWGC	5 cut(s)	1186, 1718, 1721, 1753, 2132
ApoI	RAATTY	7 cut(s)	694, 1036, 1263, 1473, 1543, 1866, 1991
Asp700I	GAANNNNTTC	1 cut(s)	1546
AspLEI	GCGC	1 cut(s)	416
AspS9I	GGNCC	1 cut(s)	374
AsuHPI	GGTGA	6 cut(s)	60, 217, 638, 866, 995, 1603
AvaI	CYCGRG	1 cut(s)	1757
AvaII	GGWCC	1 cut(s)	374
BauI	CACGAG	1 cut(s)	955
Bbv12I	GWGCWC	1 cut(s)	1514
BbvI	GCAGC	5 cut(s)	1198, 1705, 1708, 1765, 2119
BccI	CCATC	6 cut(s)	26, 974, 1102, 1362, 1390, 2099
BceAI	ACGGC	1 cut(s)	2227
BcgI	CGANNNNNNTGC	2 cut(s)	936, 970
BciT130I	CCWGG	2 cut(s)	852, 1810
BciVI	GTATCC	1 cut(s)	1138
BcoDI	GTCTC	3 cut(s)	211, 1414, 1488
BfaI	CTAG	4 cut(s)	431, 930, 1305, 1767
BfmI	CTRYAG	2 cut(s)	744, 2187
BfuI	GTATCC	1 cut(s)	1138
BglII	AGATCT	2 cut(s)	892, 932
BisI	GCNGC	5 cut(s)	1187, 1719, 1722, 1754, 2133
BlpI	GCTNAGC	1 cut(s)	2178
BlsI	GCNGC	5 cut(s)	1188, 1720, 1723, 1755, 2134
Bme1390I	CCNGG	2 cut(s)	852, 1810
Bme18I	GGWCC	1 cut(s)	374
BmeT110I	CYCGRG	1 cut(s)	1757
BmgT120I	GGNCC	1 cut(s)	374
BmiI	GGNNCC	3 cut(s)	364, 375, 376
BmrFI	CCNGG	2 cut(s)	852, 1810
BmsI	GCATC	7 cut(s)	535, 651, 1266, 1655, 1789, 2254, 2277
BpmI	CTGGAG	1 cut(s)	323
Bpu10I	CCTNAGC	1 cut(s)	1233
Bpu1102I	GCTNAGC	1 cut(s)	2178
BsaHI	GRCGYC	1 cut(s)	908
BsaJI	CCNNGG	2 cut(s)	436, 1069
BsaXI	ACNNNNNCTCC	2 cut(s)	1653, 1683
Bsc4I	CCNNNNNNNGG	8 cut(s)	423, 497, 498, 843, 1345, 1879, 2108, 2253
Bse1I	ACTGG	4 cut(s)	340, 711, 1128, 1339
Bse3DI	GCAATG	2 cut(s)	1286, 1461
BseBI	CCWGG	2 cut(s)	852, 1810
BseDI	CCNNGG	2 cut(s)	436, 1069
BseGI	GGATG	8 cut(s)	18, 550, 800, 985, 1003, 1405, 1804, 2266
BseLI	CCNNNNNNNGG	8 cut(s)	423, 497, 498, 843, 1345, 1879, 2108, 2253
BseMI	GCAATG	2 cut(s)	1286, 1461
BseMII	CTCAG	4 cut(s)	564, 1118, 1542, 1839
BseNI	ACTGG	4 cut(s)	340, 711, 1128, 1339
BseRI	GAGGAG	2 cut(s)	34, 95
BseXI	GCAGC	5 cut(s)	1198, 1705, 1708, 1765, 2119
BsgI	GTGCAG	1 cut(s)	638
Bsh1236I	CGCG	1 cut(s)	524
BshFI	GGCC	3 cut(s)	474, 691, 1556
BsiHKAI	GWGCWC	1 cut(s)	1514
BsiHKCI	CYCGRG	1 cut(s)	1757
BslFI	GGGAC	6 cut(s)	252, 360, 859, 1208, 1254, 1498
BslI	CCNNNNNNNGG	8 cut(s)	423, 497, 498, 843, 1345, 1879, 2108, 2253
BsmAI	GTCTC	3 cut(s)	211, 1414, 1488
BsmBI	CGTCTC	1 cut(s)	211
BsmFI	GGGAC	6 cut(s)	252, 360, 859, 1208, 1254, 1498
BsmI	GAATGC	3 cut(s)	956, 1064, 1989
BsnI	GGCC	3 cut(s)	474, 691, 1556
BsoBI	CYCGRG	1 cut(s)	1757
Bsp1286I	GDGCHC	1 cut(s)	1514
Bsp143I	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
Bsp1720I	GCTNAGC	1 cut(s)	2178
Bsp19I	CCATGG	1 cut(s)	436
BspACI	CCGC	3 cut(s)	492, 599, 995
BspANI	GGCC	3 cut(s)	474, 691, 1556
BspCNI	CTCAG	4 cut(s)	565, 1117, 1543, 1838
BspFNI	CGCG	1 cut(s)	524
BspHI	TCATGA	1 cut(s)	1818
BspLI	GGNNCC	3 cut(s)	364, 375, 376
BspPI	GGATC	4 cut(s)	1105, 1345, 2128, 2192
BsrDI	GCAATG	2 cut(s)	1286, 1461
BsrI	ACTGG	4 cut(s)	340, 711, 1128, 1339
BssECI	CCNNGG	2 cut(s)	436, 1069
BssMI	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
BssNI	GRCGYC	1 cut(s)	908
BssSI	CACGAG	1 cut(s)	955
BssT1I	CCWWGG	2 cut(s)	436, 1069
Bst2BI	CACGAG	1 cut(s)	955
Bst2UI	CCWGG	2 cut(s)	852, 1810
Bst4CI	ACNGT	5 cut(s)	89, 448, 1621, 1676, 1776
Bst6I	CTCTTC	4 cut(s)	32, 64, 396, 1929
BstACI	GRCGYC	1 cut(s)	908
BstAPI	GCANNNNNTGC	2 cut(s)	1856, 2174
BstC8I	GCNNGC	6 cut(s)	459, 550, 1019, 1248, 1633, 2184
BstDEI	CTNAG	7 cut(s)	573, 1104, 1175, 1233, 1551, 1825, 2178
BstDSI	CCRYGG	1 cut(s)	436
BstF5I	GGATG	8 cut(s)	18, 550, 800, 985, 1003, 1405, 1804, 2266
BstFNI	CGCG	1 cut(s)	524
BstHHI	GCGC	1 cut(s)	416
BstKTI	GATC	9 cut(s)	895, 935, 1100, 1353, 1581, 1704, 1824, 2123, 2200
BstMAI	GTCTC	3 cut(s)	211, 1414, 1488
BstMBI	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
BstMWI	GCNNNNNNNGC	4 cut(s)	413, 1856, 2174, 2183
BstNI	CCWGG	2 cut(s)	852, 1810
BstNSI	RCATGY	4 cut(s)	520, 1021, 1850, 2186
BstSCI	CCNGG	2 cut(s)	850, 1808
BstSFI	CTRYAG	2 cut(s)	744, 2187
BstUI	CGCG	1 cut(s)	524
BstV1I	GCAGC	5 cut(s)	1198, 1705, 1708, 1765, 2119
BstX2I	RGATCY	3 cut(s)	892, 932, 2120
BstYI	RGATCY	3 cut(s)	892, 932, 2120
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	3 cut(s)	474, 691, 1556
BtgI	CCRYGG	1 cut(s)	436
BtsCI	GGATG	8 cut(s)	18, 550, 800, 985, 1003, 1405, 1804, 2266
BtsIMutI	CAGTG	2 cut(s)	704, 1672
Cac8I	GCNNGC	6 cut(s)	459, 550, 1019, 1248, 1633, 2184
CaiI	CAGNNNCTG	2 cut(s)	806, 1856
CciI	TCATGA	1 cut(s)	1818
CfoI	GCGC	1 cut(s)	416
Cfr13I	GGNCC	1 cut(s)	374
CseI	GACGC	1 cut(s)	541
CsiI	ACCWGGT	1 cut(s)	850
Csp6I	GTAC	2 cut(s)	520, 1135
CviQI	GTAC	2 cut(s)	520, 1135
DdeI	CTNAG	7 cut(s)	573, 1104, 1175, 1233, 1551, 1825, 2178
DpnI	GATC	9 cut(s)	894, 934, 1099, 1352, 1580, 1703, 1823, 2122, 2199
DpnII	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
DraIII	CACNNNGTG	1 cut(s)	854
Eam1104I	CTCTTC	4 cut(s)	32, 64, 396, 1929
EarI	CTCTTC	4 cut(s)	32, 64, 396, 1929
Eco130I	CCWWGG	2 cut(s)	436, 1069
Eco47I	GGWCC	1 cut(s)	374
Eco88I	CYCGRG	1 cut(s)	1757
EcoO109I	RGGNCCY	1 cut(s)	374
EcoRII	CCWGG	2 cut(s)	850, 1808
EcoT14I	CCWWGG	2 cut(s)	436, 1069
EcoT22I	ATGCAT	2 cut(s)	666, 2320
ErhI	CCWWGG	2 cut(s)	436, 1069
Esp3I	CGTCTC	1 cut(s)	211
FaqI	GGGAC	6 cut(s)	252, 360, 859, 1208, 1254, 1498
FauI	CCCGC	1 cut(s)	499
Fnu4HI	GCNGC	5 cut(s)	1187, 1719, 1722, 1754, 2133
FokI	GGATG	8 cut(s)	5, 557, 807, 992, 1010, 1412, 1811, 2273
Fsp4HI	GCNGC	5 cut(s)	1187, 1719, 1722, 1754, 2133
FspBI	CTAG	4 cut(s)	431, 930, 1305, 1767
GlaI	GCGC	1 cut(s)	415
GluI	GCNGC	5 cut(s)	1187, 1719, 1722, 1754, 2133
GsuI	CTGGAG	1 cut(s)	323
HaeIII	GGCC	3 cut(s)	474, 691, 1556
HgaI	GACGC	1 cut(s)	541
HhaI	GCGC	1 cut(s)	416
Hin1I	GRCGYC	1 cut(s)	908
Hin6I	GCGC	1 cut(s)	414
HinP1I	GCGC	1 cut(s)	414
HindIII	AAGCTT	2 cut(s)	723, 1169
HinfI	GANTC	9 cut(s)	236, 257, 487, 857, 1156, 1301, 1853, 2143, 2192
HphI	GGTGA	6 cut(s)	60, 217, 638, 866, 995, 1603
Hpy166II	GTNNAC	4 cut(s)	514, 764, 1121, 1672
Hpy188I	TCNGA	5 cut(s)	367, 802, 1107, 1552, 2197
Hpy8I	GTNNAC	4 cut(s)	514, 764, 1121, 1672
Hpy99I	CGWCG	1 cut(s)	913
HpyCH4III	ACNGT	5 cut(s)	89, 448, 1621, 1676, 1776
HpyCH4IV	ACGT	2 cut(s)	183, 908
HpyF10VI	GCNNNNNNNGC	4 cut(s)	413, 1856, 2174, 2183
HpyF3I	CTNAG	7 cut(s)	573, 1104, 1175, 1233, 1551, 1825, 2178
HpySE526I	ACGT	2 cut(s)	183, 908
Hsp92I	GRCGYC	1 cut(s)	908
HspAI	GCGC	1 cut(s)	414
KflI	GGGWCCC	1 cut(s)	374
Kzo9I	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
LmnI	GCTCC	3 cut(s)	368, 740, 1509
Lsp1109I	GCAGC	5 cut(s)	1198, 1705, 1708, 1765, 2119
LweI	GCATC	7 cut(s)	535, 651, 1266, 1655, 1789, 2254, 2277
MabI	ACCWGGT	1 cut(s)	850
MaeI	CTAG	4 cut(s)	431, 930, 1305, 1767
MaeII	ACGT	2 cut(s)	183, 908
MaeIII	GTNAC	5 cut(s)	323, 1078, 1501, 1615, 1676
MalI	GATC	9 cut(s)	894, 934, 1099, 1352, 1580, 1703, 1823, 2122, 2199
MboI	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
MboII	GAAGA	7 cut(s)	19, 51, 231, 383, 887, 1285, 1916
MflI	RGATCY	3 cut(s)	892, 932, 2120
MhlI	GDGCHC	1 cut(s)	1514
MlyI	GAGTC	1 cut(s)	1150
MmeI	TCCRAC	4 cut(s)	99, 135, 572, 2256
Mph1103I	ATGCAT	2 cut(s)	666, 2320
MroXI	GAANNNNTTC	1 cut(s)	1546
MseI	TTAA	7 cut(s)	84, 810, 881, 1386, 1653, 1683, 1896
MslI	CAYNNNNRTG	3 cut(s)	1433, 1517, 1845
MspR9I	CCNGG	2 cut(s)	852, 1810
Mva1269I	GAATGC	3 cut(s)	956, 1064, 1989
MvaI	CCWGG	2 cut(s)	852, 1810
MvnI	CGCG	1 cut(s)	524
MwoI	GCNNNNNNNGC	4 cut(s)	413, 1856, 2174, 2183
NcoI	CCATGG	1 cut(s)	436
NdeII	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
NlaIV	GGNNCC	3 cut(s)	364, 375, 376
NmeAIII	GCCGAG	3 cut(s)	442, 450, 1583
NmuCI	GTSAC	2 cut(s)	1078, 1676
NsiI	ATGCAT	2 cut(s)	666, 2320
NspI	RCATGY	4 cut(s)	520, 1021, 1850, 2186
PaeI	GCATGC	2 cut(s)	1021, 2186
PaeR7I	CTCGAG	1 cut(s)	1757
PagI	TCATGA	1 cut(s)	1818
PciI	ACATGT	1 cut(s)	516
PctI	GAATGC	3 cut(s)	956, 1064, 1989
PdmI	GAANNNNTTC	1 cut(s)	1546
PfeI	GAWTC	8 cut(s)	236, 257, 487, 857, 1301, 1853, 2143, 2192
PflFI	GACNNNGTC	1 cut(s)	1406
PflMI	CCANNNNNTGG	1 cut(s)	1879
PfoI	TCCNGGA	1 cut(s)	1808
PkrI	GCNGC	5 cut(s)	1188, 1720, 1723, 1755, 2134
PleI	GAGTC	1 cut(s)	1150
PpsI	GAGTC	1 cut(s)	1150
PpuMI	RGGWCCY	1 cut(s)	374
PscI	ACATGT	1 cut(s)	516
PsiI	TTATAA	1 cut(s)	605
Psp1406I	AACGTT	1 cut(s)	183
Psp5II	RGGWCCY	1 cut(s)	374
Psp6I	CCWGG	2 cut(s)	850, 1808
PspGI	CCWGG	2 cut(s)	850, 1808
PspN4I	GGNNCC	3 cut(s)	364, 375, 376
PspPI	GGNCC	1 cut(s)	374
PspPPI	RGGWCCY	1 cut(s)	374
PstNI	CAGNNNCTG	2 cut(s)	806, 1856
PsuI	RGATCY	3 cut(s)	892, 932, 2120
PsyI	GACNNNGTC	1 cut(s)	1406
RsaI	GTAC	2 cut(s)	521, 1136
RsaNI	GTAC	2 cut(s)	520, 1135
RseI	CAYNNNNRTG	3 cut(s)	1433, 1517, 1845
SaqAI	TTAA	7 cut(s)	84, 810, 881, 1386, 1653, 1683, 1896
SatI	GCNGC	5 cut(s)	1187, 1719, 1722, 1754, 2133
Sau3AI	GATC	9 cut(s)	892, 932, 1097, 1350, 1578, 1701, 1821, 2120, 2197
Sau96I	GGNCC	1 cut(s)	374
SchI	GAGTC	1 cut(s)	1150
ScrFI	CCNGG	2 cut(s)	852, 1810
SduI	GDGCHC	1 cut(s)	1514
SexAI	ACCWGGT	1 cut(s)	850
SfaNI	GCATC	7 cut(s)	535, 651, 1266, 1655, 1789, 2254, 2277
SfcI	CTRYAG	2 cut(s)	744, 2187
Sfr274I	CTCGAG	1 cut(s)	1757
SinI	GGWCC	1 cut(s)	374
SlaI	CTCGAG	1 cut(s)	1757
SmiMI	CAYNNNNRTG	3 cut(s)	1433, 1517, 1845
SmlI	CTYRAG	1 cut(s)	1757
SmoI	CTYRAG	1 cut(s)	1757
SphI	GCATGC	2 cut(s)	1021, 2186
SsiI	CCGC	3 cut(s)	492, 599, 995
SspMI	CTAG	4 cut(s)	431, 930, 1305, 1767
StyD4I	CCNGG	2 cut(s)	850, 1808
StyI	CCWWGG	2 cut(s)	436, 1069
TaaI	ACNGT	5 cut(s)	89, 448, 1621, 1676, 1776
TaiI	ACGT	2 cut(s)	186, 911
TaqI	TCGA	4 cut(s)	535, 561, 1394, 1758
TatI	WGTACW	1 cut(s)	1134
TfiI	GAWTC	8 cut(s)	236, 257, 487, 857, 1301, 1853, 2143, 2192
Tru1I	TTAA	7 cut(s)	84, 810, 881, 1386, 1653, 1683, 1896
Tru9I	TTAA	7 cut(s)	84, 810, 881, 1386, 1653, 1683, 1896
TscAI	CASTG	2 cut(s)	711, 1679
TseFI	GTSAC	2 cut(s)	1078, 1676
TseI	GCWGC	5 cut(s)	1186, 1718, 1721, 1753, 2132
Tsp45I	GTSAC	2 cut(s)	1078, 1676
TspGWI	ACGGA	2 cut(s)	1702, 1857
TspRI	CASTG	2 cut(s)	711, 1679
Tth111I	GACNNNGTC	1 cut(s)	1406
Van91I	CCANNNNNTGG	1 cut(s)	1879
VpaK11BI	GGWCC	1 cut(s)	374
XapI	RAATTY	7 cut(s)	694, 1036, 1263, 1473, 1543, 1866, 1991
XbaI	TCTAGA	1 cut(s)	1766
XceI	RCATGY	4 cut(s)	520, 1021, 1850, 2186
XcmI	CCANNNNNNNNNTGG	1 cut(s)	314
XhoI	CTCGAG	1 cut(s)	1757
XmnI	GAANNNNTTC	1 cut(s)	1546
XspI	CTAG	4 cut(s)	431, 930, 1305, 1767
ZraI	GACGTC	1 cut(s)	909
Zsp2I	ATGCAT	2 cut(s)	666, 2320

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.