Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0012198

Physical Location & Seq

Genomic Coordinates Forward (+)

67417451 .. 67419782

Gene Structure 2332 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00130910.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2121 bp

ATGTTCAGTAAGAAACCCATCCACCTCTTCAAACGCTTTCCCTCCTCTTTTCCGTTCTCTTCACTTTCACCTTCCAACCACCTTAACTGTCATCTCCAATCTTTCCTCTCCAACCAAACTTCAACCCTCCCACACCTCTCTCAAACCCACGCTCTCATTGTCACTTCTGGAAACTCAAACAACGTTTTCATAGCCTCAAAGCTCATCTCTTTCTATGCCTCTCTCACCAAACCCGAATCTTCCACCAAAGTATTTGATTCAGTTTCTCCCAAGGACACATTCCTCTGGAACTCCATAATCAAAACCCACTTCTCCAATGGCAGTTACTCCCATGCCCTCGAGTTCTTTACCCAAATGCGAGCCTCCGAGTTGGGTCCCAACCATTTCACTCTTCCAATGGTTGTTGCTTCCTGCGCCGAGTTGAGGTTGCTAGACCATGGAAAGACTGTTCATGGGATGGCTTCAAAACTCGGCCTTTTTGCGGGGAATCCCGCAGTTGGGTCATCTTTTGTTTACATGTACTCGAAATGTGGTCGAATGGGGGATGCATGCGTCCTGTTCGATGAGATTACTGAGAGAGATGTGGTGTGTTGGACTGCGGTTATAATTGGGTATGTGCAGAATGGTGAGAGTGAGAAAGGTCTGGAGTGTCTTTGTGAGATGCATAGGATTGGTGGAGATGGTGAGAGGCCAAATTTTAGGACACTGGAAGTTGGGTTTCAAGCTTGTGTGGATATGGGAGCTATAGGAGAAGGTAGATGTTTACATGGTTTTGTTGTGAAAAGTGGAATTGGATGTTCAGAAGCTGTTAAGTCTTTGATTTTGTCTATGTATTCCAGATGTGGGACACCTGGTGAATCCTTCGTTTTGTTTCGTGAATTGAGAAATAGAGATCTTCTATCATGGACGTCGGTTATTGGTGCTTATGCTAGATCTGGGTTAGTGGCAGAATGCTTGTGTTTATTTTGGGAAATGCACGCTAGTGATATTGTTGCGGATGAAATCGTTGTCAGTTGCATGCTTTCAGGGTTTAGAAATTCGACAACTATCAAGGAAGGAAAGGCATTCCTTGGAATTGTCACAAGGCAAAACTATGGATCAACTCAGATGGTTTATAGTGAACTGGTATCCATGTACTGCAAGTCTGGGTTATTGACTCTTGCAGAGAAGCTTTTTAGTGAAATGCAGCATTGGGACAAAGAGTGTTGTAATAATATGATTTGTGCCTATGCTAAGTTGGGGGCAATCCATCTTGGCCAATCAGTTCATGGGACACATAGAGACATTGTAACATGGAACACATTGATGTCATCTTATGCTCACAATGGAAATTTTGCTGAGGCCATAGTCCTATTTTATAAAATGATCGCAGAAAAGGTGAAGCCCAACTCGGCAACATTTGTAACGGTGCTTTCTGCTTGCTCTCATACTGCATCTCTTAAAGAAGGAGAGAGAGTTCACTGTCACATTAAGGAAAGAGGGTTAGAGATCAATTTGTCCGTTGCTGCTGCATTGGTTGATATGTATGCAAAATGTGGGCAGCTTGAGAAATCTAGAGAACTGTTCAACTCAATGAACGAGAGGGATGTTATTTCTTGGAATGTCATGATCTCAGGTTATGCTATGCACGGACATGCAGAATCTGCAATAGAAATTTTCCACAACATGGAAACTTCAAATGTTAAACCAAATGAAATAACATTCCTTTCTCTTCTTTCAGCCTGTAATCATTCAGGGCTTGTTGAACAAGGGAAGTATCTGTTTGGTAGAATGCAGGAATTTTCTGTAAAGCCCAATTTGAAGCACTATGCTTGTATGGCAGATATTCTTGGAAGGTCTGGTAAACTGCAAGAAGCTAAAGATTTGGTTCTGTCAATGCCCATTACTCCTGATGGTGGTGTATGGGGATCTCTATTAGCTGCCTGTAAGATTCACAATGAAATTGAAATGGGTGCAAGGATTGCTAAGCATGCTATAGAATCTGATCCAGAAAATGACGGCTATTATATAATGCTTTCGAACCTGTATAGTTCCATTGGAAGGTGGGATGATGCTATAAGTATGAGAAAAATGATGCAGGAGAAGGGTGTGGGAAAGACAAATGCATGGAGTGTGGTGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003676 GO:0003723 GO:0003824 GO:0004518 GO:0004519 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0006139 GO:0006396 GO:0006725 GO:0006807 GO:0008150 GO:0008152 GO:0009451 GO:0009507 GO:0009536 GO:0009987 GO:0010467 GO:0016070 GO:0016787 GO:0016788 GO:0031425 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043412 GO:0044237 GO:0044238 GO:0044424 GO:0044444 GO:0044464 GO:0046483 GO:0071704 GO:0090304 GO:0090305 GO:0097159 GO:1900865 GO:1901360 GO:1901363

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

PPR PPR_2

Protein Analysis

706

Amino Acids

78.04

Weight (kDa)

6.84

Isoelectric Point (pI)

42.45

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
PPR_2	PF13041	427 - 475	2.7e-12	PPR repeat family
PPR	PF01535	430 - 458	4.3e-07	PPR repeat
PPR_2	PF13041	528 - 575	5.1e-13	PPR repeat family
PPR_3	PF13812	529 - 575	4e-06	Pentatricopeptide repeat domain
PPR	PF01535	531 - 560	1e-06	PPR repeat
PPR_3	PF13812	552 - 605	5.8e-06	Pentatricopeptide repeat domain
E_motif	PF20431	645 - 700	9.1e-11	E motif

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0012198)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT4G39952
malus_domestica	MD01G1032300.v1.1 MD15G1322800.v1.1
prunus_persica	Prupe.6G189500_v2.0.a1
pyrus_communis	pycom01g05950 pycom15g28320
rosa_chinensis	RchiOBHm_Chr2g0113061
rosa_laevigata	RLG00000018033
rosa_multiflora	Rmu_sc0005949.1_g000001 Rmu_sc0016776.1_g000001
rosa_roxburghii	Rroxscaffold_2G00130910
rosa_rugosa	Rorug02G0183500 Rorug02G0183600 Rorug02G0183700
rosa_samantha	Rh2AG238700 Rh2BG252500 Rh2CG242700 Rh2DG246700
rosa_wichuraiana	Rw2G018720

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	605, 1359
AatII	GACGTC	1 cut(s)	911
AccB7I	CCANNNNNTGG	1 cut(s)	1666
AciI	CCGC	4 cut(s)	482, 492, 599, 995
AclI	AACGTT	1 cut(s)	183
AclWI	GGATC	3 cut(s)	1105, 1915, 1979
AcoI	YGGCCR	1 cut(s)	1255
AcsI	RAATTY	5 cut(s)	694, 1036, 1330, 1653, 1778
AcyI	GRCGYC	1 cut(s)	908
AdeI	CACNNNGTG	1 cut(s)	854
AfaI	GTAC	2 cut(s)	521, 1136
AfiI	CCNNNNNNNGG	8 cut(s)	423, 481, 497, 498, 843, 1666, 1895, 2040
AflIII	ACRYGT	1 cut(s)	516
AgsI	TTSAA	9 cut(s)	31, 123, 465, 722, 1567, 1677, 1745, 1801, 1946
AjnI	CCWGG	1 cut(s)	850
AjuI	GAANNNNNNNTTGG	2 cut(s)	263, 295
AleI	CACNNNNGTG	1 cut(s)	981
AloI	GAACNNNNNNTCC	4 cut(s)	432, 464, 1440, 1472
AluBI	AGCT	8 cut(s)	202, 725, 743, 806, 1171, 1543, 1856, 1919
AluI	AGCT	8 cut(s)	202, 725, 743, 806, 1171, 1543, 1856, 1919
Alw26I	GTCTC	1 cut(s)	1275
AlwI	GGATC	3 cut(s)	1105, 1915, 1979
AlwNI	CAGNNNCTG	2 cut(s)	806, 1643
Ama87I	CYCGRG	1 cut(s)	338
AoxI	GGCC	4 cut(s)	472, 689, 1255, 1341
ApeKI	GCWGC	5 cut(s)	1186, 1505, 1508, 1540, 1919
ApoI	RAATTY	5 cut(s)	694, 1036, 1330, 1653, 1778
AspLEI	GCGC	1 cut(s)	416
AspS9I	GGNCC	1 cut(s)	374
AsuHPI	GGTGA	6 cut(s)	60, 217, 638, 695, 866, 1390
AsuII	TTCGAA	1 cut(s)	2018
AvaI	CYCGRG	1 cut(s)	338
AvaII	GGWCC	1 cut(s)	374
BalI	TGGCCA	1 cut(s)	1257
BbvCI	CCTCAGC	1 cut(s)	1338
BbvI	GCAGC	5 cut(s)	1198, 1492, 1495, 1552, 1906
BccI	CCATC	6 cut(s)	26, 451, 674, 1102, 1257, 1886
BceAI	ACGGC	1 cut(s)	2014
BciT130I	CCWGG	1 cut(s)	852
BciVI	GTATCC	1 cut(s)	1138
BcoDI	GTCTC	1 cut(s)	1275
BfaI	CTAG	4 cut(s)	431, 930, 981, 1554
BfmI	CTRYAG	2 cut(s)	744, 1974
BfuI	GTATCC	1 cut(s)	1138
BglII	AGATCT	2 cut(s)	892, 932
BisI	GCNGC	5 cut(s)	1187, 1506, 1509, 1541, 1920
BlpI	GCTNAGC	1 cut(s)	1965
BlsI	GCNGC	5 cut(s)	1188, 1507, 1510, 1542, 1921
Bme1390I	CCNGG	1 cut(s)	852
Bme18I	GGWCC	1 cut(s)	374
BmeT110I	CYCGRG	1 cut(s)	338
BmgT120I	GGNCC	1 cut(s)	374
BmiI	GGNNCC	2 cut(s)	375, 376
BmrFI	CCNGG	1 cut(s)	852
BmsI	GCATC	5 cut(s)	535, 651, 1442, 2041, 2064
BpmI	CTGGAG	1 cut(s)	665
Bpu10I	CCTNAGC	1 cut(s)	1338
Bpu1102I	GCTNAGC	1 cut(s)	1965
Bpu14I	TTCGAA	1 cut(s)	2018
BpuEI	CTTGAG	1 cut(s)	1565
BsaHI	GRCGYC	1 cut(s)	908
BsaJI	CCNNGG	3 cut(s)	270, 436, 1069
BsaXI	ACNNNNNCTCC	2 cut(s)	1440, 1470
Bsc4I	CCNNNNNNNGG	8 cut(s)	423, 481, 497, 498, 843, 1666, 1895, 2040
Bse1I	ACTGG	2 cut(s)	711, 1128
BseBI	CCWGG	1 cut(s)	852
BseDI	CCNNGG	3 cut(s)	270, 436, 1069
BseGI	GGATG	7 cut(s)	18, 462, 550, 800, 1003, 1591, 2053
BseLI	CCNNNNNNNGG	8 cut(s)	423, 481, 497, 498, 843, 1666, 1895, 2040
BseMII	CTCAG	4 cut(s)	564, 1118, 1329, 1626
BseNI	ACTGG	2 cut(s)	711, 1128
BseRI	GAGGAG	1 cut(s)	34
BseXI	GCAGC	5 cut(s)	1198, 1492, 1495, 1552, 1906
BsgI	GTGCAG	1 cut(s)	638
BshFI	GGCC	4 cut(s)	474, 691, 1257, 1343
BsiHKCI	CYCGRG	1 cut(s)	338
BslFI	GGGAC	4 cut(s)	360, 859, 1208, 1285
BslI	CCNNNNNNNGG	8 cut(s)	423, 481, 497, 498, 843, 1666, 1895, 2040
BsmAI	GTCTC	1 cut(s)	1275
BsmFI	GGGAC	4 cut(s)	360, 859, 1208, 1285
BsmI	GAATGC	3 cut(s)	956, 1064, 1776
BsnI	GGCC	4 cut(s)	474, 691, 1257, 1343
BsoBI	CYCGRG	1 cut(s)	338
Bsp119I	TTCGAA	1 cut(s)	2018
Bsp143I	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
Bsp1720I	GCTNAGC	1 cut(s)	1965
Bsp19I	CCATGG	1 cut(s)	436
BspACI	CCGC	4 cut(s)	482, 492, 599, 995
BspANI	GGCC	4 cut(s)	474, 691, 1257, 1343
BspCNI	CTCAG	4 cut(s)	565, 1117, 1330, 1625
BspHI	TCATGA	1 cut(s)	1605
BspLI	GGNNCC	2 cut(s)	375, 376
BspPI	GGATC	3 cut(s)	1105, 1915, 1979
BspT104I	TTCGAA	1 cut(s)	2018
BsrI	ACTGG	2 cut(s)	711, 1128
BssECI	CCNNGG	3 cut(s)	270, 436, 1069
BssMI	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
BssNI	GRCGYC	1 cut(s)	908
BssT1I	CCWWGG	3 cut(s)	270, 436, 1069
Bst2UI	CCWGG	1 cut(s)	852
Bst4CI	ACNGT	5 cut(s)	89, 448, 1408, 1463, 1563
Bst6I	CTCTTC	4 cut(s)	32, 64, 396, 1716
BstACI	GRCGYC	1 cut(s)	908
BstAPI	GCANNNNNTGC	2 cut(s)	1643, 1961
BstBI	TTCGAA	1 cut(s)	2018
BstC8I	GCNNGC	6 cut(s)	360, 550, 978, 1019, 1420, 1971
BstDEI	CTNAG	6 cut(s)	573, 1104, 1233, 1338, 1612, 1965
BstDSI	CCRYGG	1 cut(s)	436
BstF5I	GGATG	7 cut(s)	18, 462, 550, 800, 1003, 1591, 2053
BstHHI	GCGC	1 cut(s)	416
BstKTI	GATC	8 cut(s)	895, 935, 1100, 1368, 1491, 1611, 1910, 1987
BstMAI	GTCTC	1 cut(s)	1275
BstMBI	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
BstMWI	GCNNNNNNNGC	5 cut(s)	413, 1643, 1817, 1961, 1970
BstNI	CCWGG	1 cut(s)	852
BstNSI	RCATGY	5 cut(s)	520, 552, 1021, 1637, 1973
BstSCI	CCNGG	1 cut(s)	850
BstSFI	CTRYAG	2 cut(s)	744, 1974
BstV1I	GCAGC	5 cut(s)	1198, 1492, 1495, 1552, 1906
BstX2I	RGATCY	3 cut(s)	892, 932, 1907
BstYI	RGATCY	3 cut(s)	892, 932, 1907
BsuI	GTATCC	1 cut(s)	1138
BsuRI	GGCC	4 cut(s)	474, 691, 1257, 1343
BtgI	CCRYGG	1 cut(s)	436
BtsCI	GGATG	7 cut(s)	18, 462, 550, 800, 1003, 1591, 2053
BtsIMutI	CAGTG	2 cut(s)	704, 1459
Cac8I	GCNNGC	6 cut(s)	360, 550, 978, 1019, 1420, 1971
CaiI	CAGNNNCTG	2 cut(s)	806, 1643
CciI	TCATGA	1 cut(s)	1605
CfoI	GCGC	1 cut(s)	416
Cfr13I	GGNCC	1 cut(s)	374
CseI	GACGC	1 cut(s)	541
CsiI	ACCWGGT	1 cut(s)	850
Csp6I	GTAC	2 cut(s)	520, 1135
CviQI	GTAC	2 cut(s)	520, 1135
DdeI	CTNAG	6 cut(s)	573, 1104, 1233, 1338, 1612, 1965
DpnI	GATC	8 cut(s)	894, 934, 1099, 1367, 1490, 1610, 1909, 1986
DpnII	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
DraIII	CACNNNGTG	1 cut(s)	854
EaeI	YGGCCR	1 cut(s)	1255
Eam1104I	CTCTTC	4 cut(s)	32, 64, 396, 1716
EarI	CTCTTC	4 cut(s)	32, 64, 396, 1716
Eco130I	CCWWGG	3 cut(s)	270, 436, 1069
Eco47I	GGWCC	1 cut(s)	374
Eco88I	CYCGRG	1 cut(s)	338
EcoO109I	RGGNCCY	1 cut(s)	374
EcoRII	CCWGG	1 cut(s)	850
EcoT14I	CCWWGG	3 cut(s)	270, 436, 1069
EcoT22I	ATGCAT	3 cut(s)	550, 666, 2107
ErhI	CCWWGG	3 cut(s)	270, 436, 1069
FaqI	GGGAC	4 cut(s)	360, 859, 1208, 1285
FauI	CCCGC	2 cut(s)	475, 499
Fnu4HI	GCNGC	5 cut(s)	1187, 1506, 1509, 1541, 1920
FokI	GGATG	7 cut(s)	5, 469, 557, 807, 1010, 1598, 2060
Fsp4HI	GCNGC	5 cut(s)	1187, 1506, 1509, 1541, 1920
FspBI	CTAG	4 cut(s)	431, 930, 981, 1554
GlaI	GCGC	1 cut(s)	415
GluI	GCNGC	5 cut(s)	1187, 1506, 1509, 1541, 1920
GsuI	CTGGAG	1 cut(s)	665
HaeIII	GGCC	4 cut(s)	474, 691, 1257, 1343
HgaI	GACGC	1 cut(s)	541
HhaI	GCGC	1 cut(s)	416
Hin1I	GRCGYC	1 cut(s)	908
Hin6I	GCGC	1 cut(s)	414
HinP1I	GCGC	1 cut(s)	414
HindIII	AAGCTT	2 cut(s)	723, 1169
HinfI	GANTC	8 cut(s)	236, 257, 487, 857, 1156, 1640, 1930, 1979
HphI	GGTGA	6 cut(s)	60, 217, 638, 695, 866, 1390
Hpy166II	GTNNAC	5 cut(s)	514, 764, 1121, 1459, 1844
Hpy188I	TCNGA	4 cut(s)	367, 802, 1107, 1984
Hpy188III	TCNNGA	9 cut(s)	168, 286, 644, 837, 875, 1554, 1606, 1889, 1988
Hpy8I	GTNNAC	5 cut(s)	514, 764, 1121, 1459, 1844
Hpy99I	CGWCG	1 cut(s)	913
HpyAV	CCTTC	8 cut(s)	81, 746, 871, 1049, 1439, 1827, 2034, 2077
HpyCH4III	ACNGT	5 cut(s)	89, 448, 1408, 1463, 1563
HpyCH4IV	ACGT	2 cut(s)	183, 908
HpyF10VI	GCNNNNNNNGC	5 cut(s)	413, 1643, 1817, 1961, 1970
HpyF3I	CTNAG	6 cut(s)	573, 1104, 1233, 1338, 1612, 1965
HpySE526I	ACGT	2 cut(s)	183, 908
Hsp92I	GRCGYC	1 cut(s)	908
HspAI	GCGC	1 cut(s)	414
KflI	GGGWCCC	1 cut(s)	374
Kzo9I	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
LmnI	GCTCC	1 cut(s)	740
Lsp1109I	GCAGC	5 cut(s)	1198, 1492, 1495, 1552, 1906
LweI	GCATC	5 cut(s)	535, 651, 1442, 2041, 2064
MabI	ACCWGGT	1 cut(s)	850
MaeI	CTAG	4 cut(s)	431, 930, 981, 1554
MaeII	ACGT	2 cut(s)	183, 908
MaeIII	GTNAC	6 cut(s)	160, 323, 1078, 1288, 1402, 1463
MalI	GATC	8 cut(s)	894, 934, 1099, 1367, 1490, 1610, 1909, 1986
MboI	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
MboII	GAAGA	6 cut(s)	19, 51, 231, 383, 887, 1703
MflI	RGATCY	3 cut(s)	892, 932, 1907
MlsI	TGGCCA	1 cut(s)	1257
MluNI	TGGCCA	1 cut(s)	1257
MlyI	GAGTC	1 cut(s)	1150
MmeI	TCCRAC	3 cut(s)	99, 135, 572
Mox20I	TGGCCA	1 cut(s)	1257
Mph1103I	ATGCAT	3 cut(s)	550, 666, 2107
MscI	TGGCCA	1 cut(s)	1257
MseI	TTAA	5 cut(s)	84, 810, 1440, 1470, 1683
MslI	CAYNNNNRTG	3 cut(s)	981, 1304, 1632
Msp20I	TGGCCA	1 cut(s)	1257
MspR9I	CCNGG	1 cut(s)	852
Mva1269I	GAATGC	3 cut(s)	956, 1064, 1776
MvaI	CCWGG	1 cut(s)	852
MwoI	GCNNNNNNNGC	5 cut(s)	413, 1643, 1817, 1961, 1970
NcoI	CCATGG	1 cut(s)	436
NdeII	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
NlaIV	GGNNCC	2 cut(s)	375, 376
NmeAIII	GCCGAG	3 cut(s)	442, 450, 1370
NmuCI	GTSAC	3 cut(s)	160, 1078, 1463
NsiI	ATGCAT	3 cut(s)	550, 666, 2107
NspI	RCATGY	5 cut(s)	520, 552, 1021, 1637, 1973
NspV	TTCGAA	1 cut(s)	2018
OliI	CACNNNNGTG	1 cut(s)	981
PaeI	GCATGC	3 cut(s)	552, 1021, 1973
PaeR7I	CTCGAG	1 cut(s)	338
PagI	TCATGA	1 cut(s)	1605
PciI	ACATGT	1 cut(s)	516
PctI	GAATGC	3 cut(s)	956, 1064, 1776
PfeI	GAWTC	7 cut(s)	236, 257, 487, 857, 1640, 1930, 1979
PflMI	CCANNNNNTGG	1 cut(s)	1666
PkrI	GCNGC	5 cut(s)	1188, 1507, 1510, 1542, 1921
PleI	GAGTC	1 cut(s)	1150
PpsI	GAGTC	1 cut(s)	1150
PpuMI	RGGWCCY	1 cut(s)	374
PscI	ACATGT	1 cut(s)	516
PsiI	TTATAA	2 cut(s)	605, 1359
Psp1406I	AACGTT	1 cut(s)	183
Psp5II	RGGWCCY	1 cut(s)	374
Psp6I	CCWGG	1 cut(s)	850
PspGI	CCWGG	1 cut(s)	850
PspN4I	GGNNCC	2 cut(s)	375, 376
PspPI	GGNCC	1 cut(s)	374
PspPPI	RGGWCCY	1 cut(s)	374
PspXI	VCTCGAGB	1 cut(s)	338
PstNI	CAGNNNCTG	2 cut(s)	806, 1643
PsuI	RGATCY	3 cut(s)	892, 932, 1907
RsaI	GTAC	2 cut(s)	521, 1136
RsaNI	GTAC	2 cut(s)	520, 1135
RseI	CAYNNNNRTG	3 cut(s)	981, 1304, 1632
SaqAI	TTAA	5 cut(s)	84, 810, 1440, 1470, 1683
SatI	GCNGC	5 cut(s)	1187, 1506, 1509, 1541, 1920
Sau3AI	GATC	8 cut(s)	892, 932, 1097, 1365, 1488, 1608, 1907, 1984
Sau96I	GGNCC	1 cut(s)	374
SchI	GAGTC	1 cut(s)	1150
ScrFI	CCNGG	1 cut(s)	852
SexAI	ACCWGGT	1 cut(s)	850
SfaNI	GCATC	5 cut(s)	535, 651, 1442, 2041, 2064
SfcI	CTRYAG	2 cut(s)	744, 1974
Sfr274I	CTCGAG	1 cut(s)	338
SfuI	TTCGAA	1 cut(s)	2018
SinI	GGWCC	1 cut(s)	374
SlaI	CTCGAG	1 cut(s)	338
SmiMI	CAYNNNNRTG	3 cut(s)	981, 1304, 1632
SmlI	CTYRAG	2 cut(s)	338, 1544
SmoI	CTYRAG	2 cut(s)	338, 1544
SphI	GCATGC	3 cut(s)	552, 1021, 1973
SsiI	CCGC	4 cut(s)	482, 492, 599, 995
SspMI	CTAG	4 cut(s)	431, 930, 981, 1554
StyD4I	CCNGG	1 cut(s)	850
StyI	CCWWGG	3 cut(s)	270, 436, 1069
TaaI	ACNGT	5 cut(s)	89, 448, 1408, 1463, 1563
TaiI	ACGT	2 cut(s)	186, 911
TaqI	TCGA	6 cut(s)	339, 524, 535, 561, 1040, 2018
TatI	WGTACW	2 cut(s)	519, 1134
TfiI	GAWTC	7 cut(s)	236, 257, 487, 857, 1640, 1930, 1979
Tru1I	TTAA	5 cut(s)	84, 810, 1440, 1470, 1683
Tru9I	TTAA	5 cut(s)	84, 810, 1440, 1470, 1683
TscAI	CASTG	2 cut(s)	711, 1466
TseFI	GTSAC	3 cut(s)	160, 1078, 1463
TseI	GCWGC	5 cut(s)	1186, 1505, 1508, 1540, 1919
Tsp45I	GTSAC	3 cut(s)	160, 1078, 1463
TspDTI	ATGAA	7 cut(s)	178, 440, 1014, 1256, 1589, 1707, 1953
TspGWI	ACGGA	3 cut(s)	42, 1489, 1644
TspRI	CASTG	2 cut(s)	711, 1466
Van91I	CCANNNNNTGG	1 cut(s)	1666
VpaK11BI	GGWCC	1 cut(s)	374
XapI	RAATTY	5 cut(s)	694, 1036, 1330, 1653, 1778
XbaI	TCTAGA	1 cut(s)	1553
XceI	RCATGY	5 cut(s)	520, 552, 1021, 1637, 1973
XcmI	CCANNNNNNNNNTGG	2 cut(s)	314, 1265
XhoI	CTCGAG	1 cut(s)	338
XspI	CTAG	4 cut(s)	431, 930, 981, 1554
ZraI	GACGTC	1 cut(s)	909
Zsp2I	ATGCAT	3 cut(s)	550, 666, 2107

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.