Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0007686

Physical Location & Seq

Genomic Coordinates Reverse (-)

11278348 .. 11282284

Gene Structure 3937 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

N/A

Sequence Viewer

CDS Protein Promoter (2k)

Length: 3000 bp

ATGGATGGTATTGAGAACTTCGTCGATAACATGGCTGCAAATCGTGTAGCAGTAAGGAATGAAAAGCTCAAGCCAAAGGAGGTTGATCCTTTTCACAATGTAGCACTGGAGGGTCAAAATCTGCCTGAGTCACCGGTGGTGTCCACAATGGAGGGCAAGGATTTGAGTAGATGTGTAACTTCTTCATCTGGATTTGAGCCCCGCTGGTCTGCAAATGGCATGGGGCAGGTGGTGGAAGAATTAAAATTGAAACGTTATAGGAAACCAGACTCAGCTTCTAGTCAAGAATGTTGGCAAGACCCAGATCCGGCAGTAGCACGAGGTTTCAGAAGTAAGAATTTTCGTGGAGATTCTACTTCACTTGGCAATGATCAGAATCTGTTGAGAGTAAGAGGCGAGCTTAGAGAAATGTCTCCTCGCGTAAGGAGTCTGAAGCCATTGTCAAGCAATTACTCTGAGCAGGAGGCGGATAAACTGTCTGCGTATTTAAGGGCTGAGGACAGCAAGATTATGTCAAACAATATGCTTAGTATTGCCAAGAAGCGACTGAAGACCCAATCTACAAATAGCAATTCTCAGTTACTTGTAAAGCAAATGTCAAAGGGAAAAACAATCAGTAAATTTCCAGAACCTTATGGTGGTTTTGGTGGTCAGGTTGTGGGCCAGAATGATTTAAAGCCCCATATTGGTTCTGAGGTAGCTAGTGATGCAGAGTTGAAAGCAAATGCCAACAATGATCGGCTTTCCTCACATGTGAAAAATCAGTCTGGCACAAAATCTATCAGTTATGGGATCAGCTTGAGGGAGTGGCTTAAACCTGGGAGTCACAAAGTCGATGTAGCTGAAAGGCTGCTCATATTTAGGCAGATTGTGGAGTTGGTTGATTTTGCACACTCTCAGGGTGTTCCCTTGCAAGACTTACGACCATCGCGCTTCATTTTGTTGCCATCAAATGAGATTAAATACACAGGTGCATCAGCCATCAGAGAACCAATCAGTATTGTGAACCAAGATTTGATTAACAAAAGGCAATCCGAGCAGGATGCAGATGCTGAAGGTATTTTAGGTGGAACACAGATAAAAATGAGTGAAGGTAATGAGGACGAATATTTCATAGCTGGTCCAAAAAAAATTGAGTTTGGTGAACTCCAGTTCCGAATGAATTCGAGCTACCAAAATAAATTGGTTGCAGTACAGCAAGGGTCAACTTCTGTAATTGTTCAGTTGGAAGAAAAGTGGTATACCAGTCCGGAGGAGTTCAGTGAGAGAGGTTGCACACTTTCTTCAAATGTCTATGCCCTTGGGGTCCTTCTTTTTGAGTTGTTGTGTCTCTGTGACTCATGGGAGGTGCATTCCGCATTGATGTGGGATTTGCACGATCGGATTCTGCCACCAAGTTTTCTTTCTCAAAATCCACTCGGAGCTGGCTTTTGCTTATGGCTTCTCCATCCTGAACCTTTGTCTCGTCCAACAACTAGAGAGATCCTGCAGTCTGAACTGATGGGTGGAAAACAAGAATCGGCTTCTTGTGACGATTTCTCAAAATCTGCTGATGATTTTGATGCAGAATCAGAGGCATTACTTGGTTTTCTCAGCTCATTAAAAGACAAGAAGCAAGGTCATGCCTCTAGGTTAGTTGAAGATATAAGATGCTTAGAAGAAGATATAAACAAGTTTGGAGGGAGGTCCTTATCAGGAATATCCTCAGATGTTTCCTTAGCACACAAGGAATTTTATAGCGACAGAGAACAGGGTTCAGTGTCAAATATGATTGAGACGCAATTGATGAAGAATATCAACCAGTTAGGGGATGCTTATGCTTCCACAAGATCCCAGATGAGGCTAAAGAAAACTACTCCTGTAGCACGCTCTGATAAGGAGGTGTTAAACAATCGATACAGTTGGCTTCATGTGCGAAATGGTAGTCAGGATTCAAGCACCAACCAGAAATCAGGTGATCGGCTTGGAGCCTTTTTTGATGGTTTAGCCAAGTTTTCTCGCTTTAGCAAGTTTGAAGTATGTGGGACATCAAGAAACAGAGATCTTCTAAACTCTAGCAATGTGATTTGCTGTTTGAGTTTCGACCGTGATGAGGAGTACATTGCTACTGCTGGAGTATCAAAGAAAATCAAGATCCTTGATTTTGATTCGCTTGTAGACAATTCTTTGGATATCCATTATCCTGTAGTTGAAATGCCACACAAATCTAAGCTGAGCTGCGTTTGCTGGAACAACTATTTTAAGAACTATCTGGCTTCATCGGATTATGATGGAGTCGTACAGATGTGGGATGCAACTACTGGGCAAGGATTTTCTCAGTATGTAGAGCACCAAAGGAGGGCTTGGTGTGTCGAATTCTCTCAAGCTGACCCAAAGAAGTTTGCTAGTGGAAGTGATGACTGTACAGTGAAACTATGGAGCACTAATGATAAAAAATCAACAGACACAATCCAGAATGCTGCCAATGTATGTTGTGTTCAGTTCTCTGCTTGCTCTTCTAATCTCGTGGTTTTTGGATCCGCTGATTACAAAATTTATGGCTATGATCTTCGGAATACTAGAATCCCTTGGTGCACTTTACCTGGTCATGGAAAAGCTGTTAGCTATGTAAAGTTTGTAGATGCGGAAACCCTTGTTTCTGCATCTACAGACAACACTCTGAAGCTTTGGGATCTTAACCAATCTACCTCAACCGGATTGTCTCGCAATGCCTGCAGCTTAACATTTAGTGGTCACACTAATGAGAAGAATTTCGTGGGTTTATCTGTTTCGGATGGATACATAGCATGTGGATCAGAAACTAACGAGGTTTATAGTTATTACAGAAGTCTACCGATGCCCATCACTTCACACAAATTTGGATCAATTGATCCTGTTTCTGGAAGGGAGGTTGGTGATTACAGCGGGCAGTTTGTCTCCAGTGTCTGTTGGAGAAGAAAGTCTAACATACTTGTTGCTGCCAACTCAAGTGGAACTTTGAAATTATTGCAGATGGTGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0003006 GO:0003674 GO:0005488 GO:0005515 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005654 GO:0006996 GO:0007154 GO:0007165 GO:0007275 GO:0008150 GO:0009314 GO:0009416 GO:0009628 GO:0009637 GO:0009639 GO:0009640 GO:0009648 GO:0009657 GO:0009658 GO:0009791 GO:0009987 GO:0010017 GO:0010099 GO:0010100 GO:0010114 GO:0010218 GO:0010228 GO:0016043 GO:0016604 GO:0022414 GO:0023052 GO:0031461 GO:0031974 GO:0031981 GO:0032501 GO:0032502 GO:0032991 GO:0042802 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043233 GO:0044422 GO:0044424 GO:0044428 GO:0044446 GO:0044451 GO:0044464 GO:0048519 GO:0048572 GO:0048573 GO:0048575 GO:0048580 GO:0048581 GO:0048583 GO:0048585 GO:0048608 GO:0048731 GO:0048856 GO:0050789 GO:0050793 GO:0050794 GO:0050896 GO:0051093 GO:0051239 GO:0051241 GO:0051716 GO:0061458 GO:0065007 GO:0070013 GO:0071214 GO:0071478 GO:0071482 GO:0071489 GO:0071840 GO:0080008 GO:0104004 GO:1902494 GO:1990234 GO:2000026 GO:2000028 GO:2000030 GO:2000241

KEGG Pathways

Metabolic & Signaling

ko04712 map04712

Pfam Domains

Protein Families

Pkinase WD40

Protein Analysis

1000

Amino Acids

111.15

Weight (kDa)

6.26

Isoelectric Point (pI)

46.99

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
WD40_CDC20-Fz	PF24807	678 - 836	4.1e-13	CDC20/Fizzy WD40 domain
WD40_Gbeta	PF25391	683 - 852	6.1e-06	G protein beta WD-40 repeat protein
Beta-prop_TEP1_2nd	PF25047	683 - 780	1.1e-06	TEP-1 second beta-propeller
Beta-prop_WDR5	PF25175	686 - 940	3.7e-30	WDR5 beta-propeller domain
Beta-prop_WDR35_TULP_N	PF24797	687 - 853	7.7e-08	WDR35/TULP4 N-terminal
Beta-prop_WDR3_1st	PF25173	687 - 789	2e-06	WDR3 first beta-propeller domain
Beta-prop_EML	PF23409	688 - 896	9.7e-07	Echinoderm microtubule-associated protein first beta-propeller
Beta-prop_RIG_2nd	PF23775	696 - 787	8.9e-09	RIG second beta-propeller
Beta-prop_WDR36-Utp21_1st	PF25171	707 - 890	2.1e-08	WDR36/Utp21 first beta-propeller
Beta-prop_THOC3	PF25174	734 - 933	1e-21	THOC3 beta-propeller domain
WD40_Prp19	PF24814	737 - 819	9.7e-08	Prp19 WD40 domain
Beta-prop_EML_2	PF23414	749 - 897	4.7e-10	Echinoderm microtubule-associated protein second beta-propeller
EIF3I	PF24805	749 - 838	1.7e-07	EIF3I
Beta-prop_WDR36-Utp21_2nd	PF25168	756 - 910	6.4e-09	WDR36/Utp21 second beta-propeller domain
WD40_WDHD1_1st	PF24817	773 - 897	1.2e-11	WDHD1 first WD40 domain
WDR55	PF24796	775 - 904	1.6e-08	WDR55
Beta-prop_WDR3_1st	PF25173	789 - 939	1.4e-16	WDR3 first beta-propeller domain
Beta-prop_EML_2	PF23414	791 - 996	1.4e-08	Echinoderm microtubule-associated protein second beta-propeller
Beta-prop_TEP1_2nd	PF25047	792 - 898	1.4e-07	TEP-1 second beta-propeller
Beta-prop_EIPR1	PF23609	812 - 890	6.8e-07	EIPR1 beta-propeller
WD40_Prp19	PF24814	820 - 933	4.3e-10	Prp19 WD40 domain
Beta-prop_THOC3	PF25174	859 - 997	4.6e-06	THOC3 beta-propeller domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Orthologous Genes (Group: OG0007686)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G46340 AT2G46340
fragaria_vesca	FvH4_7g15970
malus_domestica	MD01G1076400.v1.1 MD07G1145300.v1.1
prunus_persica	Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1 Prupe.2G183800_v2.0.a1
pyrus_communis	pycom01g10530
rosa_chinensis	RchiOBHm_Chr1g0358871
rosa_laevigata	RLG00000027920
rosa_multiflora	Rmu_sc0008757.1_g000013
rosa_roxburghii	Rroxscaffold_4G00297550
rosa_rugosa	Rorug01G0265700 Rorug01G0265800 Rorug01G0265900 Rorug01G0266000
rosa_samantha	Rh1AG279700 Rh1BG246600 Rh1CG263700 Rh1DG275000
rosa_wichuraiana	Rw1G024850

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	217
Acc36I	ACCTGC	1 cut(s)	217
AccI	GTMKAC	3 cut(s)	1241, 2157, 2830
AccII	CGCG	2 cut(s)	420, 931
AccIII	TCCGGA	1 cut(s)	1249
AciI	CCGC	6 cut(s)	202, 467, 1356, 2520, 2624, 2904
AclI	AACGTT	1 cut(s)	253
AcsI	RAATTY	8 cut(s)	337, 620, 1162, 1730, 2354, 2532, 2749, 2855
AcuI	CTGAAG	4 cut(s)	452, 569, 1074, 2681
AfaI	GTAC	4 cut(s)	1194, 2099, 2280, 2404
AfiI	CCNNNNNNNGG	9 cut(s)	307, 638, 686, 1807, 1839, 2092, 2338, 2588, 2879
AflIII	ACRYGT	1 cut(s)	751
AgeI	ACCGGT	1 cut(s)	133
AgsI	TTSAA	8 cut(s)	250, 718, 1287, 1640, 1935, 2015, 2192, 2980
AjnI	CCWGG	2 cut(s)	817, 2581
AjuI	GAANNNNNNNTTGG	2 cut(s)	1387, 1419
AloI	GAACNNNNNNTCC	2 cut(s)	1137, 1169
Alw21I	GWGCWC	3 cut(s)	2331, 2423, 2576
Alw26I	GTCTC	6 cut(s)	417, 1334, 1467, 1769, 2706, 2920
Alw44I	GTGCAC	1 cut(s)	2572
AlwNI	CAGNNNCTG	3 cut(s)	379, 1052, 2925
Aor13HI	TCCGGA	1 cut(s)	1249
AoxI	GGCC	1 cut(s)	661
ApaLI	GTGCAC	1 cut(s)	2572
ApeKI	GCWGC	6 cut(s)	35, 850, 2217, 2459, 2715, 2957
ApoI	RAATTY	8 cut(s)	337, 620, 1162, 1730, 2354, 2532, 2749, 2855
ArsI	GACNNNNNNTTYG	2 cut(s)	1909, 1941
AsiGI	ACCGGT	1 cut(s)	133
Asp700I	GAANNNNTTC	2 cut(s)	1162, 2750
AspLEI	GCGC	1 cut(s)	933
AspS9I	GGNCC	4 cut(s)	661, 1121, 1306, 1686
AsuHPI	GGTGA	4 cut(s)	123, 1154, 1967, 2906
AvaII	GGWCC	3 cut(s)	1121, 1306, 1686
BaeGI	GKGCMC	1 cut(s)	2576
BamHI	GGATCC	1 cut(s)	2516
BanII	GRGCYC	1 cut(s)	201
BauI	CACGAG	2 cut(s)	318, 2504
BbsI	GAAGAC	1 cut(s)	557
Bbv12I	GWGCWC	3 cut(s)	2331, 2423, 2576
BbvCI	CCTCAGC	1 cut(s)	495
BbvI	GCAGC	6 cut(s)	22, 837, 2204, 2446, 2727, 2944
BcgI	CGANNNNNNTGC	2 cut(s)	1025, 1059
BciT130I	CCWGG	2 cut(s)	819, 2583
BciVI	GTATCC	1 cut(s)	2771
BclI	TGATCA	1 cut(s)	370
BcoDI	GTCTC	6 cut(s)	417, 1334, 1467, 1769, 2706, 2920
BfaI	CTAG	7 cut(s)	279, 702, 1476, 1629, 2055, 2385, 2559
BfmI	CTRYAG	5 cut(s)	1487, 1860, 2184, 2646, 2713
BfuAI	ACCTGC	1 cut(s)	217
BfuI	GTATCC	1 cut(s)	2771
BglII	AGATCT	1 cut(s)	2041
BisI	GCNGC	6 cut(s)	36, 851, 2218, 2460, 2716, 2958
BlpI	GCTNAGC	1 cut(s)	2213
BlsI	GCNGC	6 cut(s)	37, 852, 2219, 2461, 2717, 2959
Bme1390I	CCNGG	2 cut(s)	819, 2583
Bme18I	GGWCC	3 cut(s)	1121, 1306, 1686
BmgT120I	GGNCC	4 cut(s)	661, 1121, 1306, 1686
BmiI	GGNNCC	3 cut(s)	1307, 1969, 2518
BmrFI	CCNGG	2 cut(s)	819, 2583
BmrI	ACTGGG	1 cut(s)	2310
BmuI	ACTGGG	1 cut(s)	2310
BpiI	GAAGAC	1 cut(s)	557
BpmI	CTGGAG	4 cut(s)	128, 1133, 2133, 2902
Bpu10I	CCTNAGC	2 cut(s)	495, 1717
Bpu1102I	GCTNAGC	1 cut(s)	2213
BpuEI	CTTGAG	4 cut(s)	53, 820, 2346, 2950
Bsa29I	ATCGAT	1 cut(s)	1894
BsaBI	GATNNNNATC	2 cut(s)	375, 2840
BsaJI	CCNNGG	3 cut(s)	818, 1300, 2567
BsaWI	WCCGGW	3 cut(s)	133, 1249, 2693
Bsc4I	CCNNNNNNNGG	9 cut(s)	307, 638, 686, 1807, 1839, 2092, 2338, 2588, 2879
Bse118I	RCCGGY	1 cut(s)	133
Bse1I	ACTGG	6 cut(s)	111, 1150, 1245, 1801, 2305, 2919
Bse3DI	GCAATG	4 cut(s)	373, 2065, 2100, 2713
Bse8I	GATNNNNATC	2 cut(s)	375, 2840
BseAI	TCCGGA	1 cut(s)	1249
BseBI	CCWGG	2 cut(s)	819, 2583
BseCI	ATCGAT	1 cut(s)	1894
BseDI	CCNNGG	3 cut(s)	818, 1300, 2567
BseGI	GGATG	6 cut(s)	10, 1048, 1447, 1816, 2296, 2779
BseJI	GATNNNNATC	2 cut(s)	375, 2840
BseLI	CCNNNNNNNGG	9 cut(s)	307, 638, 686, 1807, 1839, 2092, 2338, 2588, 2879
BseMI	GCAATG	4 cut(s)	373, 2065, 2100, 2713
BseNI	ACTGG	6 cut(s)	111, 1150, 1245, 1801, 2305, 2919
BseRI	GAGGAG	3 cut(s)	405, 1268, 2108
BseSI	GKGCMC	1 cut(s)	2576
BseXI	GCAGC	6 cut(s)	22, 837, 2204, 2446, 2727, 2944
Bsh1236I	CGCG	2 cut(s)	420, 931
Bsh1285I	CGRYCG	2 cut(s)	1381, 2086
BshFI	GGCC	1 cut(s)	663
BshTI	ACCGGT	1 cut(s)	133
BshVI	ATCGAT	1 cut(s)	1894
BsiEI	CGRYCG	2 cut(s)	1381, 2086
BsiHKAI	GWGCWC	3 cut(s)	2331, 2423, 2576
BsiSI	CCGG	4 cut(s)	134, 308, 1250, 2694
BslFI	GGGAC	1 cut(s)	2038
BslI	CCNNNNNNNGG	9 cut(s)	307, 638, 686, 1807, 1839, 2092, 2338, 2588, 2879
BsmAI	GTCTC	6 cut(s)	417, 1334, 1467, 1769, 2706, 2920
BsmBI	CGTCTC	1 cut(s)	1769
BsmFI	GGGAC	1 cut(s)	2038
BsmI	GAATGC	2 cut(s)	1351, 2461
BsnI	GGCC	1 cut(s)	663
Bsp1286I	GDGCHC	4 cut(s)	201, 2331, 2423, 2576
Bsp13I	TCCGGA	1 cut(s)	1249
Bsp1407I	TGTACA	1 cut(s)	2402
Bsp1720I	GCTNAGC	1 cut(s)	2213
BspACI	CCGC	6 cut(s)	202, 467, 1356, 2520, 2624, 2904
BspANI	GGCC	1 cut(s)	663
BspDI	ATCGAT	1 cut(s)	1894
BspEI	TCCGGA	1 cut(s)	1249
BspFNI	CGCG	2 cut(s)	420, 931
BspLI	GGNNCC	3 cut(s)	1307, 1969, 2518
BspMAI	CTGCAG	2 cut(s)	1491, 2717
BspMI	ACCTGC	1 cut(s)	217
BspQI	GCTCTTC	1 cut(s)	2500
BsrDI	GCAATG	4 cut(s)	373, 2065, 2100, 2713
BsrFI	RCCGGY	1 cut(s)	133
BsrGI	TGTACA	1 cut(s)	2402
BsrI	ACTGG	6 cut(s)	111, 1150, 1245, 1801, 2305, 2919
BssAI	RCCGGY	1 cut(s)	133
BssECI	CCNNGG	3 cut(s)	818, 1300, 2567
BssNAI	GTATAC	1 cut(s)	1242
BssSI	CACGAG	2 cut(s)	318, 2504
BssT1I	CCWWGG	2 cut(s)	1300, 2567
Bst1107I	GTATAC	1 cut(s)	1242
Bst2BI	CACGAG	2 cut(s)	318, 2504
Bst2UI	CCWGG	2 cut(s)	819, 2583
Bst4CI	ACNGT	5 cut(s)	477, 1901, 2087, 2402, 2407
Bst6I	CTCTTC	1 cut(s)	2500
BstAPI	GCANNNNNTGC	1 cut(s)	2712
BstAUI	TGTACA	1 cut(s)	2402
BstC8I	GCNNGC	6 cut(s)	398, 1426, 1867, 2491, 2713, 2906
BstF5I	GGATG	6 cut(s)	10, 1048, 1447, 1816, 2296, 2779
BstFNI	CGCG	2 cut(s)	420, 931
BstHHI	GCGC	1 cut(s)	933
BstMAI	GTCTC	6 cut(s)	417, 1334, 1467, 1769, 2706, 2920
BstMCI	CGRYCG	2 cut(s)	1381, 2086
BstMWI	GCNNNNNNNGC	5 cut(s)	707, 1036, 1912, 2223, 2712
BstNI	CCWGG	2 cut(s)	819, 2583
BstNSI	RCATGY	2 cut(s)	755, 2790
BstSCI	CCNGG	2 cut(s)	817, 2581
BstSFI	CTRYAG	5 cut(s)	1487, 1860, 2184, 2646, 2713
BstSLI	GKGCMC	1 cut(s)	2576
BstUI	CGCG	2 cut(s)	420, 931
BstV1I	GCAGC	6 cut(s)	22, 837, 2204, 2446, 2727, 2944
BstV2I	GAAGAC	1 cut(s)	557
BstX2I	RGATCY	7 cut(s)	304, 1482, 1829, 2041, 2133, 2516, 2671
BstYI	RGATCY	7 cut(s)	304, 1482, 1829, 2041, 2133, 2516, 2671
BstZ17I	GTATAC	1 cut(s)	1242
Bsu15I	ATCGAT	1 cut(s)	1894
BsuI	GTATCC	1 cut(s)	2771
BsuRI	GGCC	1 cut(s)	663
BsuTUI	ATCGAT	1 cut(s)	1894
BtgZI	GCGATG	1 cut(s)	912
BtsCI	GGATG	6 cut(s)	10, 1048, 1447, 1816, 2296, 2779
BtsIMutI	CAGTG	5 cut(s)	104, 1267, 1764, 2412, 2926
BveI	ACCTGC	1 cut(s)	217
Cac8I	GCNNGC	6 cut(s)	398, 1426, 1867, 2491, 2713, 2906
CaiI	CAGNNNCTG	3 cut(s)	379, 1052, 2925
CfoI	GCGC	1 cut(s)	933
Cfr10I	RCCGGY	1 cut(s)	133
Cfr13I	GGNCC	4 cut(s)	661, 1121, 1306, 1686
ClaI	ATCGAT	1 cut(s)	1894
CseI	GACGC	1 cut(s)	1786
CsiI	ACCWGGT	1 cut(s)	2581
Csp6I	GTAC	4 cut(s)	1193, 2098, 2279, 2403
CspAI	ACCGGT	1 cut(s)	133
CspCI	CAANNNNNGTGG	2 cut(s)	2950, 2985
CviAII	CATG	8 cut(s)	31, 220, 752, 1341, 1622, 1910, 2588, 2787
CviQI	GTAC	4 cut(s)	1193, 2098, 2279, 2403
DraI	TTTAAA	1 cut(s)	675
Eam1104I	CTCTTC	1 cut(s)	2500
EarI	CTCTTC	1 cut(s)	2500
EciI	GGCGGA	1 cut(s)	482
Eco130I	CCWWGG	2 cut(s)	1300, 2567
Eco24I	GRGCYC	1 cut(s)	201
Eco32I	GATATC	1 cut(s)	2173
Eco47I	GGWCC	3 cut(s)	1121, 1306, 1686
Eco57I	CTGAAG	4 cut(s)	452, 569, 1074, 2681
EcoO109I	RGGNCCY	2 cut(s)	1306, 1686
EcoRI	GAATTC	2 cut(s)	1162, 2354
EcoRII	CCWGG	2 cut(s)	817, 2581
EcoRV	GATATC	1 cut(s)	2173
EcoT14I	CCWWGG	2 cut(s)	1300, 2567
EcoT38I	GRGCYC	1 cut(s)	201
ErhI	CCWWGG	2 cut(s)	1300, 2567
Esp3I	CGTCTC	1 cut(s)	1769
FaeI	CATG	8 cut(s)	34, 223, 755, 1344, 1625, 1913, 2591, 2790
FalI	AAGNNNNNCTT	4 cut(s)	2326, 2358, 2959, 2991
FaqI	GGGAC	1 cut(s)	2038
FatI	CATG	8 cut(s)	30, 219, 751, 1340, 1621, 1909, 2587, 2786
FauI	CCCGC	2 cut(s)	209, 2897
FbaI	TGATCA	1 cut(s)	370
FblI	GTMKAC	3 cut(s)	1241, 2157, 2830
Fnu4HI	GCNGC	6 cut(s)	36, 851, 2218, 2460, 2716, 2958
FokI	GGATG	6 cut(s)	17, 1055, 1434, 1823, 2303, 2786
FriOI	GRGCYC	1 cut(s)	201
Fsp4HI	GCNGC	6 cut(s)	36, 851, 2218, 2460, 2716, 2958
FspBI	CTAG	7 cut(s)	279, 702, 1476, 1629, 2055, 2385, 2559
GlaI	GCGC	1 cut(s)	932
GluI	GCNGC	6 cut(s)	36, 851, 2218, 2460, 2716, 2958
GsuI	CTGGAG	4 cut(s)	128, 1133, 2133, 2902
HaeIII	GGCC	1 cut(s)	663
HapII	CCGG	4 cut(s)	134, 308, 1250, 2694
HgaI	GACGC	1 cut(s)	1786
HhaI	GCGC	1 cut(s)	933
Hin1II	CATG	8 cut(s)	34, 223, 755, 1344, 1625, 1913, 2591, 2790
Hin6I	GCGC	1 cut(s)	931
HinP1I	GCGC	1 cut(s)	931
HincII	GTYRAC	1 cut(s)	1206
HindII	GTYRAC	1 cut(s)	1206
HindIII	AAGCTT	1 cut(s)	2663
HpaII	CCGG	4 cut(s)	134, 308, 1250, 2694
HphI	GGTGA	4 cut(s)	123, 1154, 1967, 2906
Hpy166II	GTNNAC	8 cut(s)	144, 1006, 1145, 1206, 1242, 2158, 2574, 2831
Hpy8I	GTNNAC	8 cut(s)	144, 1006, 1145, 1206, 1242, 2158, 2574, 2831
Hpy99I	CGWCG	1 cut(s)	26
HpyAV	CCTTC	4 cut(s)	1049, 1085, 1319, 2877
HpyCH4III	ACNGT	5 cut(s)	477, 1901, 2087, 2402, 2407
HpyCH4IV	ACGT	1 cut(s)	253
HpyF10VI	GCNNNNNNNGC	5 cut(s)	707, 1036, 1912, 2223, 2712
HpySE526I	ACGT	1 cut(s)	253
Hsp92II	CATG	8 cut(s)	34, 223, 755, 1344, 1625, 1913, 2591, 2790
HspAI	GCGC	1 cut(s)	931
Kpn2I	TCCGGA	1 cut(s)	1249
Ksp22I	TGATCA	1 cut(s)	370
LguI	GCTCTTC	1 cut(s)	2500
LmnI	GCTCC	3 cut(s)	1421, 1967, 2418
Lsp1109I	GCAGC	6 cut(s)	22, 837, 2204, 2446, 2727, 2944
MabI	ACCWGGT	1 cut(s)	2581
MaeI	CTAG	7 cut(s)	279, 702, 1476, 1629, 2055, 2385, 2559
MaeII	ACGT	1 cut(s)	253
MaeIII	GTNAC	7 cut(s)	129, 175, 579, 824, 1334, 1529, 2732
MfeI	CAATTG	2 cut(s)	1781, 2865
MflI	RGATCY	7 cut(s)	304, 1482, 1829, 2041, 2133, 2516, 2671
MhlI	GDGCHC	4 cut(s)	201, 2331, 2423, 2576
MlyI	GAGTC	6 cut(s)	137, 263, 436, 832, 1331, 2283
MmeI	TCCRAC	3 cut(s)	1206, 1493, 2909
MroI	TCCGGA	1 cut(s)	1249
MroXI	GAANNNNTTC	2 cut(s)	1162, 2750
MslI	CAYNNNNRTG	2 cut(s)	1363, 2739
MspA1I	CMGCKG	3 cut(s)	204, 2522, 2904
MspI	CCGG	4 cut(s)	134, 308, 1250, 2694
MspR9I	CCNGG	2 cut(s)	819, 2583
MunI	CAATTG	2 cut(s)	1781, 2865
Mva1269I	GAATGC	2 cut(s)	1351, 2461
MvaI	CCWGG	2 cut(s)	819, 2583
MvnI	CGCG	2 cut(s)	420, 931
MwoI	GCNNNNNNNGC	5 cut(s)	707, 1036, 1912, 2223, 2712
NlaIII	CATG	8 cut(s)	34, 223, 755, 1344, 1625, 1913, 2591, 2790
NlaIV	GGNNCC	3 cut(s)	1307, 1969, 2518
NmuCI	GTSAC	5 cut(s)	129, 824, 1334, 1529, 2732
NspI	RCATGY	2 cut(s)	755, 2790
PaqCI	CACCTGC	1 cut(s)	217
PciI	ACATGT	1 cut(s)	751
PciSI	GCTCTTC	1 cut(s)	2500
PctI	GAATGC	2 cut(s)	1351, 2461
PdmI	GAANNNNTTC	2 cut(s)	1162, 2750
PfeI	GAWTC	8 cut(s)	350, 376, 1384, 1517, 1568, 1931, 2147, 2562
PinAI	ACCGGT	1 cut(s)	133
PkrI	GCNGC	6 cut(s)	37, 852, 2219, 2461, 2717, 2959
Ple19I	CGATCG	1 cut(s)	1381
PleI	GAGTC	6 cut(s)	136, 263, 435, 831, 1331, 2282
PpsI	GAGTC	6 cut(s)	136, 263, 435, 831, 1331, 2282
PpuMI	RGGWCCY	2 cut(s)	1306, 1686
PscI	ACATGT	1 cut(s)	751
Psp1406I	AACGTT	1 cut(s)	253
Psp5II	RGGWCCY	2 cut(s)	1306, 1686
Psp6I	CCWGG	2 cut(s)	817, 2581
PspGI	CCWGG	2 cut(s)	817, 2581
PspN4I	GGNNCC	3 cut(s)	1307, 1969, 2518
PspPI	GGNCC	4 cut(s)	661, 1121, 1306, 1686
PspPPI	RGGWCCY	2 cut(s)	1306, 1686
PsrI	GAACNNNNNNTAC	2 cut(s)	2460, 2492
PstI	CTGCAG	2 cut(s)	1491, 2717
PstNI	CAGNNNCTG	3 cut(s)	379, 1052, 2925
PsuI	RGATCY	7 cut(s)	304, 1482, 1829, 2041, 2133, 2516, 2671
PvuI	CGATCG	1 cut(s)	1381
RsaI	GTAC	4 cut(s)	1194, 2099, 2280, 2404
RsaNI	GTAC	4 cut(s)	1193, 2098, 2279, 2403
RseI	CAYNNNNRTG	2 cut(s)	1363, 2739
SapI	GCTCTTC	1 cut(s)	2500
SatI	GCNGC	6 cut(s)	36, 851, 2218, 2460, 2716, 2958
Sau96I	GGNCC	4 cut(s)	661, 1121, 1306, 1686
SchI	GAGTC	6 cut(s)	137, 263, 436, 832, 1331, 2283
ScrFI	CCNGG	2 cut(s)	819, 2583
SduI	GDGCHC	4 cut(s)	201, 2331, 2423, 2576
SexAI	ACCWGGT	1 cut(s)	2581
SfcI	CTRYAG	5 cut(s)	1487, 1860, 2184, 2646, 2713
SgrAI	CRCCGGYG	1 cut(s)	133
SinI	GGWCC	3 cut(s)	1121, 1306, 1686
SmiMI	CAYNNNNRTG	2 cut(s)	1363, 2739
SmlI	CTYRAG	4 cut(s)	68, 799, 2361, 2965
SmoI	CTYRAG	4 cut(s)	68, 799, 2361, 2965
SsiI	CCGC	6 cut(s)	202, 467, 1356, 2520, 2624, 2904
SspI	AATATT	1 cut(s)	1109
SspMI	CTAG	7 cut(s)	279, 702, 1476, 1629, 2055, 2385, 2559
StyD4I	CCNGG	2 cut(s)	817, 2581
StyI	CCWWGG	2 cut(s)	1300, 2567
TaaI	ACNGT	5 cut(s)	477, 1901, 2087, 2402, 2407
TaiI	ACGT	1 cut(s)	256
TaqI	TCGA	6 cut(s)	24, 834, 1166, 1894, 2082, 2352
TatI	WGTACW	3 cut(s)	1192, 2097, 2402
TfiI	GAWTC	8 cut(s)	350, 376, 1384, 1517, 1568, 1931, 2147, 2562
TscAI	CASTG	5 cut(s)	111, 1267, 1764, 2412, 2926
TseFI	GTSAC	5 cut(s)	129, 824, 1334, 1529, 2732
TseI	GCWGC	6 cut(s)	35, 850, 2217, 2459, 2715, 2957
Tsp45I	GTSAC	5 cut(s)	129, 824, 1334, 1529, 2732
TspDTI	ATGAA	8 cut(s)	75, 174, 925, 1102, 1175, 1802, 1898, 2247
TspRI	CASTG	5 cut(s)	111, 1267, 1764, 2412, 2926
VneI	GTGCAC	1 cut(s)	2572
VpaK11BI	GGWCC	3 cut(s)	1121, 1306, 1686
XapI	RAATTY	8 cut(s)	337, 620, 1162, 1730, 2354, 2532, 2749, 2855
XceI	RCATGY	2 cut(s)	755, 2790
XmiI	GTMKAC	3 cut(s)	1241, 2157, 2830
XmnI	GAANNNNTTC	2 cut(s)	1162, 2750
XspI	CTAG	7 cut(s)	279, 702, 1476, 1629, 2055, 2385, 2559

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.