Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr1

Orthogroup ID

OG0015371

Physical Location & Seq

Genomic Coordinates Forward (+)

12034147 .. 12035778

Gene Structure 1632 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom01g11140.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1632 bp

ATGGATGCTGCTTCTGTTCATCCTAAAAGTAGTAGTGATAACAGTAGTAGTATAAACATGGACAAGGAGAGATTGACGGCGGAGATGGCGTTCAAGGACTCGTCCTCCGCCGTCATCAAAATCCGGCGGCACCTGCCGGATTTCTTACAGTCCGTCAAGCTCAAGTACGTCAAGCTCGGGTATGGCTATACCGTTAACGCAGCCACCATTATTTTGTTCCTCCTCATTTTACCGCTCTTCGTCTCCGTAATAATCCAGCTCACCGGTCTGGAGCTGGAACGGATCACCGAGCTCTGGACCAACCAGGCCGTCCGGCTCGAAAGCATCGACGCCGCCACCAGGCTCACCGGTTCAGGGGTCCTTCTCTTCTTCTTTGGCCTCTACTGGGCCAAGAGGTCTAGACCGGTCTACCTCGTCGACTTCTCATGCTACAAACCGGAAGACGAACGCAAAATGTCCGTCGAGTCGTTTCTAAAAATGACGGAAGACAACGGCGCATTTGCTCCCGACACGGTTAACTTCCAGACCCGCATTTCGAACCGGTCCGGTCTAGGCGATGAGACGTACTTGCCTCGCGGAATCACCTCCAACCCGCCACAGCTGTCAATGGAGCAAGCCCGGTCCGAGGCCGAGTCGGTCATGTTCGGCGCGCTCGACTCACTCTTCGAAAAAACCGGAATCAAACCGAACCAAATCGACATCCTCATCGTTAACTGCAGCCTGTTCAACCCGACGCCGTCACTGTCCTCCATGATCGTCAACCACTACAAGCTCAAAACCGACATTAAATCCTACAACCTCGGCGGCATGGGCTGTAGCGCCGGACTGATCTCCATCGACCTAGCCAAGGACCTCCTCAAAGCAAACCCCAACTCCTACGCCGTCGTAGTCAGCACCGAAAACATAACCTTAAACTGGTACTTCGGAAACGACAAATCCATGCTCCTCTGCAACTGTATTTTCCGAATGGGCGGGGCCGCGGTTCTCCTATCAAACAAGAACCGCGACCGCGCCCGGTCCAAGTACGAGCTCATACACACCGTCCGGACCCATAAGGGCGCCGACGACAAGAACTACAAGTGCGTTTACCAGCGGGAAGACGACAAAGGCACCGTCGGCGTTTCGCTGGCGCGTGAGCTCATGGCCGTGGCGGGCGACGCGTTGAAAACGAACATAACGACGCTTGGCCCACTCGTCCTGCCGTTTACCGAACAAGTGCTGTTTTTCATAACGCTGATTCGGAAGAAGGTTTTCAAGGCGAAGGTCAAGCCGTACATTCCGGACTTTAAGCTCGCGTTCGAGCACTTCTGCATCCACGCGGGCGGACGCGCCGTCCTGGACGAGTTGGAGAAGAATCTGCAACTCACTGAGTGGCACATGGAGCCATCTCGGATGACGTTGCACCGGTTTGGCAACACGTCGAGCAGTTCGCTGTGGTACGAGCTGTCGTACGCGGAGGCGAAGGGTCGGGTTGGGAGGGGTGATCGGGTTTGGCAGATCGCCTTTGGGTCGGGTTTTAAGTGTAACAGCGCGGTTTGGCGGGCCCTCCGGCCGATTTCGGTCGGGGACGGGTTGGGTAATCCGTGGATGGACTCGATTGATAAATACCCGGTCAAAATCCCGATAGCTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009922 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0022626 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0050896 GO:0071704 GO:1901568 GO:1901570 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

544

Amino Acids

60.71

Weight (kDa)

9.0

Isoelectric Point (pI)

29.04

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	129 - 417	3.5e-142	FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C	PF08541	434 - 514	3.6e-11	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C	PF02797	436 - 514	2.8e-08	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0015371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01120
fragaria_vesca	FvH4_7g17440
malus_domestica	MD01G1087400.v1.1 MD07G1157600.v1.1
prunus_persica	Prupe.2G196000_v2.0.a1
pyrus_communis	pycom01g11140 pycom07g15410
rosa_chinensis	RchiOBHm_Chr1g0360891
rosa_laevigata	RLG00000027773 RLG00000027775
rosa_multiflora	Rmu_sc0000677.1_g000044
rosa_rugosa	Rorug01G0282900
rosa_samantha	Rh1AG294400 Rh1BG259400 Rh1DG289400
rosa_wichuraiana	Rw1G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	141
Acc36I	ACCTGC	1 cut(s)	141
AccB1I	GGYRCC	3 cut(s)	129, 1058, 1109
AccBSI	CCGCTC	1 cut(s)	235
AccI	GTMKAC	2 cut(s)	408, 417
AccIII	TCCGGA	2 cut(s)	1044, 1279
AclWI	GGATC	1 cut(s)	290
AcoI	YGGCCR	2 cut(s)	1143, 1550
AcyI	GRCGYC	3 cut(s)	330, 734, 1059
AdeI	CACNNNGTG	1 cut(s)	1371
AfaI	GTAC	7 cut(s)	167, 566, 920, 1025, 1274, 1439, 1451
AfiI	CCNNNNNNNGG	7 cut(s)	294, 339, 354, 385, 625, 847, 915
AflIII	ACRYGT	2 cut(s)	1158, 1416
AgeI	ACCGGT	5 cut(s)	263, 347, 403, 540, 1404
AgsI	TTSAA	4 cut(s)	94, 727, 1165, 1255
AhdI	GACNNNNNGTC	1 cut(s)	1331
AjiI	CACGTC	1 cut(s)	1419
AjnI	CCWGG	3 cut(s)	303, 338, 1335
AloI	GAACNNNNNNTCC	2 cut(s)	74, 106
Alw21I	GWGCWC	4 cut(s)	294, 1032, 1140, 1305
Alw26I	GTCTC	2 cut(s)	247, 554
AlwI	GGATC	1 cut(s)	290
Ama87I	CYCGRG	1 cut(s)	176
Aor13HI	TCCGGA	2 cut(s)	1044, 1279
AoxI	GGCC	9 cut(s)	306, 376, 387, 627, 975, 1143, 1186, 1542, 1550
ApaI	GGGCCC	1 cut(s)	1546
ApeKI	GCWGC	3 cut(s)	8, 200, 717
ArsI	GACNNNNNNTTYG	8 cut(s)	444, 476, 517, 549, 647, 679, 1098, 1130
AsiGI	ACCGGT	5 cut(s)	263, 347, 403, 540, 1404
Asp700I	GAANNNNTTC	1 cut(s)	1250
AspLEI	GCGC	9 cut(s)	497, 650, 652, 821, 1013, 1061, 1132, 1331, 1532
AsuC2I	CCSGG	3 cut(s)	619, 1015, 1610
AsuHPI	GGTGA	5 cut(s)	253, 277, 337, 574, 1493
AsuII	TTCGAA	2 cut(s)	536, 666
AvaI	CYCGRG	1 cut(s)	176
AvaII	GGWCC	7 cut(s)	297, 358, 543, 621, 850, 1017, 1047
BaeGI	GKGCMC	1 cut(s)	1546
BanI	GGYRCC	3 cut(s)	129, 1058, 1109
BanII	GRGCYC	4 cut(s)	294, 1032, 1140, 1546
BbsI	GAAGAC	3 cut(s)	447, 492, 1104
Bbv12I	GWGCWC	4 cut(s)	294, 1032, 1140, 1305
BbvI	GCAGC	2 cut(s)	212, 729
BccI	CCATC	4 cut(s)	79, 842, 1393, 1582
BciT130I	CCWGG	3 cut(s)	305, 340, 1337
BcnI	CCSGG	3 cut(s)	619, 1015, 1610
BcoDI	GTCTC	2 cut(s)	247, 554
BfaI	CTAG	3 cut(s)	399, 551, 842
BfmI	CTRYAG	2 cut(s)	715, 814
BfoI	RGCGCY	2 cut(s)	822, 1062
BfuAI	ACCTGC	1 cut(s)	141
BisI	GCNGC	7 cut(s)	9, 128, 201, 333, 718, 805, 978
BlsI	GCNGC	7 cut(s)	10, 129, 202, 334, 719, 806, 979
Bme1390I	CCNGG	6 cut(s)	305, 340, 619, 1015, 1337, 1610
Bme18I	GGWCC	7 cut(s)	297, 358, 543, 621, 850, 1017, 1047
BmeRI	GACNNNNNGTC	1 cut(s)	1331
BmeT110I	CYCGRG	1 cut(s)	176
BmgBI	CACGTC	1 cut(s)	1419
BmiI	GGNNCC	8 cut(s)	131, 359, 976, 1049, 1060, 1111, 1383, 1544
BmrFI	CCNGG	6 cut(s)	305, 340, 619, 1015, 1337, 1610
BmrI	ACTGGG	1 cut(s)	394
BmsI	GCATC	2 cut(s)	333, 1320
BmuI	ACTGGG	1 cut(s)	394
BpiI	GAAGAC	3 cut(s)	447, 492, 1104
BpmI	CTGGAG	1 cut(s)	290
Bpu14I	TTCGAA	2 cut(s)	536, 666
BpuEI	CTTGAG	1 cut(s)	146
BpuMI	CCSGG	3 cut(s)	619, 1015, 1610
BsaBI	GATNNNNATC	1 cut(s)	833
BsaHI	GRCGYC	3 cut(s)	330, 734, 1059
BsaJI	CCNNGG	6 cut(s)	624, 799, 846, 978, 1146, 1583
BsaXI	ACNNNNNCTCC	6 cut(s)	74, 89, 104, 119, 857, 887
Bsc4I	CCNNNNNNNGG	7 cut(s)	294, 339, 354, 385, 625, 847, 915
Bse118I	RCCGGY	5 cut(s)	263, 347, 403, 540, 1404
Bse1I	ACTGG	2 cut(s)	389, 920
Bse8I	GATNNNNATC	1 cut(s)	833
BseAI	TCCGGA	2 cut(s)	1044, 1279
BseBI	CCWGG	3 cut(s)	305, 340, 1337
BseDI	CCNNGG	6 cut(s)	624, 799, 846, 978, 1146, 1583
BseGI	GGATG	6 cut(s)	10, 19, 699, 1311, 1398, 1593
BseJI	GATNNNNATC	1 cut(s)	833
BseLI	CCNNNNNNNGG	7 cut(s)	294, 339, 354, 385, 625, 847, 915
BseMII	CTCAG	1 cut(s)	1359
BseNI	ACTGG	2 cut(s)	389, 920
BsePI	GCGCGC	1 cut(s)	648
BseRI	GAGGAG	3 cut(s)	212, 845, 935
BseSI	GKGCMC	1 cut(s)	1546
BseX3I	CGGCCG	1 cut(s)	1550
BseXI	GCAGC	2 cut(s)	212, 729
Bsh1285I	CGRYCG	3 cut(s)	1009, 1553, 1563
BshFI	GGCC	9 cut(s)	308, 378, 389, 629, 977, 1145, 1188, 1544, 1552
BshNI	GGYRCC	3 cut(s)	129, 1058, 1109
BshTI	ACCGGT	5 cut(s)	263, 347, 403, 540, 1404
BsiEI	CGRYCG	3 cut(s)	1009, 1553, 1563
BsiHKAI	GWGCWC	4 cut(s)	294, 1032, 1140, 1305
BsiHKCI	CYCGRG	1 cut(s)	176
BsiWI	CGTACG	1 cut(s)	1449
BslFI	GGGAC	1 cut(s)	1580
BslI	CCNNNNNNNGG	7 cut(s)	294, 339, 354, 385, 625, 847, 915
BsmAI	GTCTC	2 cut(s)	247, 554
BsmBI	CGTCTC	2 cut(s)	247, 554
BsmFI	GGGAC	1 cut(s)	1580
BsnI	GGCC	9 cut(s)	308, 378, 389, 629, 977, 1145, 1188, 1544, 1552
BsoBI	CYCGRG	1 cut(s)	176
Bsp119I	TTCGAA	2 cut(s)	536, 666
Bsp120I	GGGCCC	1 cut(s)	1542
Bsp1286I	GDGCHC	5 cut(s)	294, 1032, 1140, 1305, 1546
Bsp13I	TCCGGA	2 cut(s)	1044, 1279
Bsp143I	GATC	5 cut(s)	282, 753, 828, 1483, 1497
BspANI	GGCC	9 cut(s)	308, 378, 389, 629, 977, 1145, 1188, 1544, 1552
BspCNI	CTCAG	1 cut(s)	1360
BspEI	TCCGGA	2 cut(s)	1044, 1279
BspLI	GGNNCC	8 cut(s)	131, 359, 976, 1049, 1060, 1111, 1383, 1544
BspMAI	CTGCAG	1 cut(s)	719
BspMI	ACCTGC	1 cut(s)	141
BspPI	GGATC	1 cut(s)	290
BspQI	GCTCTTC	1 cut(s)	242
BspT104I	TTCGAA	2 cut(s)	536, 666
BspT107I	GGYRCC	3 cut(s)	129, 1058, 1109
BsrBI	CCGCTC	1 cut(s)	235
BsrFI	RCCGGY	5 cut(s)	263, 347, 403, 540, 1404
BsrI	ACTGG	2 cut(s)	389, 920
BssAI	RCCGGY	5 cut(s)	263, 347, 403, 540, 1404
BssECI	CCNNGG	6 cut(s)	624, 799, 846, 978, 1146, 1583
BssHII	GCGCGC	1 cut(s)	648
BssMI	GATC	5 cut(s)	282, 753, 828, 1483, 1497
BssNI	GRCGYC	3 cut(s)	330, 734, 1059
BssT1I	CCWWGG	1 cut(s)	846
Bst2UI	CCWGG	3 cut(s)	305, 340, 1337
Bst4CI	ACNGT	8 cut(s)	44, 150, 193, 514, 744, 956, 1042, 1114
Bst6I	CTCTTC	3 cut(s)	242, 371, 668
BstACI	GRCGYC	3 cut(s)	330, 734, 1059
BstBI	TTCGAA	2 cut(s)	536, 666
BstC8I	GCNNGC	7 cut(s)	615, 650, 1128, 1153, 1293, 1321, 1542
BstDEI	CTNAG	2 cut(s)	1368, 1629
BstDSI	CCRYGG	3 cut(s)	978, 1146, 1583
BstENI	CCTNNNNNAGG	1 cut(s)	845
BstF5I	GGATG	6 cut(s)	10, 19, 699, 1311, 1398, 1593
BstH2I	RGCGCY	2 cut(s)	822, 1062
BstHHI	GCGC	9 cut(s)	497, 650, 652, 821, 1013, 1061, 1132, 1331, 1532
BstKTI	GATC	5 cut(s)	285, 756, 831, 1486, 1500
BstMAI	GTCTC	2 cut(s)	247, 554
BstMBI	GATC	5 cut(s)	282, 753, 828, 1483, 1497
BstMCI	CGRYCG	3 cut(s)	1009, 1553, 1563
BstMWI	GCNNNNNNNGC	6 cut(s)	86, 133, 810, 1116, 1157, 1381
BstNI	CCWGG	3 cut(s)	305, 340, 1337
BstSCI	CCNGG	6 cut(s)	303, 338, 617, 1013, 1335, 1608
BstSFI	CTRYAG	2 cut(s)	715, 814
BstSLI	GKGCMC	1 cut(s)	1546
BstV1I	GCAGC	2 cut(s)	212, 729
BstV2I	GAAGAC	3 cut(s)	447, 492, 1104
BstZI	CGGCCG	1 cut(s)	1550
BsuRI	GGCC	9 cut(s)	308, 378, 389, 629, 977, 1145, 1188, 1544, 1552
BtgI	CCRYGG	3 cut(s)	978, 1146, 1583
BtgZI	GCGATG	1 cut(s)	570
BtrI	CACGTC	1 cut(s)	1419
BtsCI	GGATG	6 cut(s)	10, 19, 699, 1311, 1398, 1593
BtsIMutI	CAGTG	2 cut(s)	740, 1365
BveI	ACCTGC	1 cut(s)	141
Cac8I	GCNNGC	7 cut(s)	615, 650, 1128, 1153, 1293, 1321, 1542
CfoI	GCGC	9 cut(s)	497, 650, 652, 821, 1013, 1061, 1132, 1331, 1532
Cfr10I	RCCGGY	5 cut(s)	263, 347, 403, 540, 1404
Cfr42I	CCGCGG	1 cut(s)	981
CpoI	CGGWCCG	2 cut(s)	543, 621
CseI	GACGC	5 cut(s)	338, 742, 1166, 1189, 1335
Csp6I	GTAC	7 cut(s)	166, 565, 919, 1024, 1273, 1438, 1450
CspAI	ACCGGT	5 cut(s)	263, 347, 403, 540, 1404
CspI	CGGWCCG	2 cut(s)	543, 621
CviAII	CATG	8 cut(s)	58, 426, 640, 751, 808, 940, 1141, 1378
CviQI	GTAC	7 cut(s)	166, 565, 919, 1024, 1273, 1438, 1450
DdeI	CTNAG	2 cut(s)	1368, 1629
DinI	GGCGCC	1 cut(s)	1060
DpnI	GATC	5 cut(s)	284, 755, 830, 1485, 1499
DpnII	GATC	5 cut(s)	282, 753, 828, 1483, 1497
DraIII	CACNNNGTG	1 cut(s)	1371
DriI	GACNNNNNGTC	1 cut(s)	1331
EaeI	YGGCCR	2 cut(s)	1143, 1550
EagI	CGGCCG	1 cut(s)	1550
Eam1104I	CTCTTC	3 cut(s)	242, 371, 668
Eam1105I	GACNNNNNGTC	1 cut(s)	1331
EarI	CTCTTC	3 cut(s)	242, 371, 668
EciI	GGCGGA	3 cut(s)	95, 97, 1338
Ecl136II	GAGCTC	3 cut(s)	292, 1030, 1138
EclXI	CGGCCG	1 cut(s)	1550
Eco130I	CCWWGG	1 cut(s)	846
Eco24I	GRGCYC	4 cut(s)	294, 1032, 1140, 1546
Eco47I	GGWCC	7 cut(s)	297, 358, 543, 621, 850, 1017, 1047
Eco52I	CGGCCG	1 cut(s)	1550
Eco53kI	GAGCTC	3 cut(s)	292, 1030, 1138
Eco88I	CYCGRG	1 cut(s)	176
EcoICRI	GAGCTC	3 cut(s)	292, 1030, 1138
EcoNI	CCTNNNNNAGG	1 cut(s)	845
EcoO109I	RGGNCCY	3 cut(s)	358, 850, 1543
EcoRII	CCWGG	3 cut(s)	303, 338, 1335
EcoT14I	CCWWGG	1 cut(s)	846
EcoT38I	GRGCYC	4 cut(s)	294, 1032, 1140, 1546
EgeI	GGCGCC	1 cut(s)	1060
EheI	GGCGCC	1 cut(s)	1060
ErhI	CCWWGG	1 cut(s)	846
Esp3I	CGTCTC	2 cut(s)	247, 554
FaeI	CATG	8 cut(s)	61, 429, 643, 754, 811, 943, 1144, 1381
FaqI	GGGAC	1 cut(s)	1580
FatI	CATG	8 cut(s)	57, 425, 639, 750, 807, 939, 1140, 1377
FauI	CCCGC	7 cut(s)	536, 600, 965, 1086, 1144, 1312, 1533
FblI	GTMKAC	2 cut(s)	408, 417
Fnu4HI	GCNGC	7 cut(s)	9, 128, 201, 333, 718, 805, 978
FokI	GGATG	6 cut(s)	6, 17, 686, 1298, 1405, 1600
FriOI	GRGCYC	4 cut(s)	294, 1032, 1140, 1546
Fsp4HI	GCNGC	7 cut(s)	9, 128, 201, 333, 718, 805, 978
FspBI	CTAG	3 cut(s)	399, 551, 842
GlaI	GCGC	9 cut(s)	496, 649, 651, 820, 1012, 1060, 1131, 1330, 1531
GluI	GCNGC	7 cut(s)	9, 128, 201, 333, 718, 805, 978
GsuI	CTGGAG	1 cut(s)	290
HaeII	RGCGCY	2 cut(s)	822, 1062
HaeIII	GGCC	9 cut(s)	308, 378, 389, 629, 977, 1145, 1188, 1544, 1552
HgaI	GACGC	5 cut(s)	338, 742, 1166, 1189, 1335
HhaI	GCGC	9 cut(s)	497, 650, 652, 821, 1013, 1061, 1132, 1331, 1532
Hin1I	GRCGYC	3 cut(s)	330, 734, 1059
Hin1II	CATG	8 cut(s)	61, 429, 643, 754, 811, 943, 1144, 1381
Hin6I	GCGC	9 cut(s)	495, 648, 650, 819, 1011, 1059, 1130, 1329, 1530
HinP1I	GCGC	9 cut(s)	495, 648, 650, 819, 1011, 1059, 1130, 1329, 1530
HincII	GTYRAC	5 cut(s)	196, 418, 517, 712, 760
HindII	GTYRAC	5 cut(s)	196, 418, 517, 712, 760
HinfI	GANTC	9 cut(s)	98, 464, 579, 632, 656, 678, 1237, 1354, 1592
HpaI	GTTAAC	3 cut(s)	196, 517, 712
HphI	GGTGA	5 cut(s)	253, 277, 337, 574, 1493
Hpy166II	GTNNAC	8 cut(s)	196, 409, 418, 517, 712, 760, 1087, 1206
Hpy188I	TCNGA	5 cut(s)	625, 926, 965, 1242, 1392
Hpy188III	TCNNGA	8 cut(s)	269, 295, 399, 506, 523, 1045, 1280, 1621
Hpy8I	GTNNAC	8 cut(s)	196, 409, 418, 517, 712, 760, 1087, 1206
HpyAV	CCTTC	4 cut(s)	371, 1240, 1255, 1456
HpyCH4III	ACNGT	8 cut(s)	44, 150, 193, 514, 744, 956, 1042, 1114
HpyCH4IV	ACGT	4 cut(s)	168, 563, 1397, 1418
HpyCH4V	TGCA	5 cut(s)	717, 951, 1311, 1360, 1402
HpyF10VI	GCNNNNNNNGC	6 cut(s)	86, 133, 810, 1116, 1157, 1381
HpyF3I	CTNAG	2 cut(s)	1368, 1629
HpySE526I	ACGT	4 cut(s)	168, 563, 1397, 1418
Hsp92I	GRCGYC	3 cut(s)	330, 734, 1059
Hsp92II	CATG	8 cut(s)	61, 429, 643, 754, 811, 943, 1144, 1381
HspAI	GCGC	9 cut(s)	495, 648, 650, 819, 1011, 1059, 1130, 1329, 1530
KasI	GGCGCC	1 cut(s)	1058
Kpn2I	TCCGGA	2 cut(s)	1044, 1279
KspAI	GTTAAC	3 cut(s)	196, 517, 712
KspI	CCGCGG	1 cut(s)	981
Kzo9I	GATC	5 cut(s)	282, 753, 828, 1483, 1497
LguI	GCTCTTC	1 cut(s)	242
LmnI	GCTCC	5 cut(s)	271, 508, 610, 948, 1381
Lsp1109I	GCAGC	2 cut(s)	212, 729
LweI	GCATC	2 cut(s)	333, 1320
MaeI	CTAG	3 cut(s)	399, 551, 842
MaeII	ACGT	4 cut(s)	168, 563, 1397, 1418
MaeIII	GTNAC	2 cut(s)	738, 1523
MalI	GATC	5 cut(s)	284, 755, 830, 1485, 1499
MbiI	CCGCTC	1 cut(s)	235
MboI	GATC	5 cut(s)	282, 753, 828, 1483, 1497
MboII	GAAGA	9 cut(s)	229, 358, 361, 452, 497, 655, 1109, 1255, 1363
MhlI	GDGCHC	5 cut(s)	294, 1032, 1140, 1305, 1546
MluI	ACGCGT	1 cut(s)	1158
Mly113I	GGCGCC	1 cut(s)	1059
MlyI	GAGTC	5 cut(s)	92, 473, 641, 650, 1586
MmeI	TCCRAC	2 cut(s)	612, 1326
MroI	TCCGGA	2 cut(s)	1044, 1279
MroXI	GAANNNNTTC	1 cut(s)	1250
MseI	TTAA	7 cut(s)	195, 516, 711, 786, 911, 1287, 1518
MslI	CAYNNNNRTG	1 cut(s)	1145
MspA1I	CMGCKG	3 cut(s)	601, 980, 1093
MspR9I	CCNGG	6 cut(s)	305, 340, 619, 1015, 1337, 1610
MvaI	CCWGG	3 cut(s)	305, 340, 1337
MwoI	GCNNNNNNNGC	6 cut(s)	86, 133, 810, 1116, 1157, 1381
NarI	GGCGCC	1 cut(s)	1059
NciI	CCSGG	3 cut(s)	619, 1015, 1610
NdeII	GATC	5 cut(s)	282, 753, 828, 1483, 1497
NlaIII	CATG	8 cut(s)	61, 429, 643, 754, 811, 943, 1144, 1381
NlaIV	GGNNCC	8 cut(s)	131, 359, 976, 1049, 1060, 1111, 1383, 1544
NmeAIII	GCCGAG	2 cut(s)	655, 780
NmuCI	GTSAC	1 cut(s)	738
NspV	TTCGAA	2 cut(s)	536, 666
PaqCI	CACCTGC	1 cut(s)	141
PauI	GCGCGC	1 cut(s)	648
PciSI	GCTCTTC	1 cut(s)	242
PcsI	WCGNNNNNNNCGW	3 cut(s)	324, 651, 1175
PdmI	GAANNNNTTC	1 cut(s)	1250
PfeI	GAWTC	4 cut(s)	579, 678, 1237, 1354
Pfl23II	CGTACG	1 cut(s)	1449
PflFI	GACNNNGTC	1 cut(s)	736
PfoI	TCCNGGA	1 cut(s)	1335
PinAI	ACCGGT	5 cut(s)	263, 347, 403, 540, 1404
PkrI	GCNGC	7 cut(s)	10, 129, 202, 334, 719, 806, 979
PleI	GAGTC	5 cut(s)	92, 472, 640, 650, 1586
PluTI	GGCGCC	1 cut(s)	1062
PpsI	GAGTC	5 cut(s)	92, 472, 640, 650, 1586
PpuMI	RGGWCCY	2 cut(s)	358, 850
Psp124BI	GAGCTC	3 cut(s)	294, 1032, 1140
Psp5II	RGGWCCY	2 cut(s)	358, 850
Psp6I	CCWGG	3 cut(s)	303, 338, 1335
PspGI	CCWGG	3 cut(s)	303, 338, 1335
PspLI	CGTACG	1 cut(s)	1449
PspN4I	GGNNCC	8 cut(s)	131, 359, 976, 1049, 1060, 1111, 1383, 1544
PspOMI	GGGCCC	1 cut(s)	1542
PspPPI	RGGWCCY	2 cut(s)	358, 850
PstI	CTGCAG	1 cut(s)	719
PsyI	GACNNNGTC	1 cut(s)	736
PteI	GCGCGC	1 cut(s)	648
PvuII	CAGCTG	1 cut(s)	601
RsaI	GTAC	7 cut(s)	167, 566, 920, 1025, 1274, 1439, 1451
RsaNI	GTAC	7 cut(s)	166, 565, 919, 1024, 1273, 1438, 1450
RseI	CAYNNNNRTG	1 cut(s)	1145
Rsr2I	CGGWCCG	2 cut(s)	543, 621
RsrII	CGGWCCG	2 cut(s)	543, 621
SacI	GAGCTC	3 cut(s)	294, 1032, 1140
SacII	CCGCGG	1 cut(s)	981
SalI	GTCGAC	1 cut(s)	416
SapI	GCTCTTC	1 cut(s)	242
SaqAI	TTAA	7 cut(s)	195, 516, 711, 786, 911, 1287, 1518
SatI	GCNGC	7 cut(s)	9, 128, 201, 333, 718, 805, 978
Sau3AI	GATC	5 cut(s)	282, 753, 828, 1483, 1497
SchI	GAGTC	5 cut(s)	92, 473, 641, 650, 1586
ScrFI	CCNGG	6 cut(s)	305, 340, 619, 1015, 1337, 1610
SduI	GDGCHC	5 cut(s)	294, 1032, 1140, 1305, 1546
SfaNI	GCATC	2 cut(s)	333, 1320
SfcI	CTRYAG	2 cut(s)	715, 814
SfoI	GGCGCC	1 cut(s)	1060
Sfr303I	CCGCGG	1 cut(s)	981
SfuI	TTCGAA	2 cut(s)	536, 666
SgrBI	CCGCGG	1 cut(s)	981
SinI	GGWCC	7 cut(s)	297, 358, 543, 621, 850, 1017, 1047
SmiMI	CAYNNNNRTG	1 cut(s)	1145
SmlI	CTYRAG	1 cut(s)	161
SmoI	CTYRAG	1 cut(s)	161
SspDI	GGCGCC	1 cut(s)	1058
SspMI	CTAG	3 cut(s)	399, 551, 842
SstI	GAGCTC	3 cut(s)	294, 1032, 1140
StyD4I	CCNGG	6 cut(s)	303, 338, 617, 1013, 1335, 1608
StyI	CCWWGG	1 cut(s)	846
TaaI	ACNGT	8 cut(s)	44, 150, 193, 514, 744, 956, 1042, 1114
TaiI	ACGT	4 cut(s)	171, 566, 1400, 1421
TaqII	GACCGA	2 cut(s)	625, 1549
TauI	GCSGC	4 cut(s)	130, 335, 807, 980
TfiI	GAWTC	4 cut(s)	579, 678, 1237, 1354
Tru1I	TTAA	7 cut(s)	195, 516, 711, 786, 911, 1287, 1518
Tru9I	TTAA	7 cut(s)	195, 516, 711, 786, 911, 1287, 1518
TscAI	CASTG	2 cut(s)	747, 1372
TseFI	GTSAC	1 cut(s)	738
TseI	GCWGC	3 cut(s)	8, 200, 717
Tsp45I	GTSAC	1 cut(s)	738
TspDTI	ATGAA	2 cut(s)	8, 1216
TspGWI	ACGGA	6 cut(s)	142, 235, 295, 448, 497, 1572
TspRI	CASTG	2 cut(s)	747, 1372
Tth111I	GACNNNGTC	1 cut(s)	736
VpaK11BI	GGWCC	7 cut(s)	297, 358, 543, 621, 850, 1017, 1047
XagI	CCTNNNNNAGG	1 cut(s)	845
XbaI	TCTAGA	1 cut(s)	398
XmiI	GTMKAC	2 cut(s)	408, 417
XmnI	GAANNNNTTC	1 cut(s)	1250
XspI	CTAG	3 cut(s)	399, 551, 842

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.