Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0015371

Physical Location & Seq

Genomic Coordinates Reverse (-)

15053236 .. 15054840

Gene Structure 1605 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027773

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1386 bp

ATGGAGAGTAACAGCATAGAGATGGATAAGGAGAGACTTACTGCGGAGATGGATTTCAACAAGGACTCCTCCTCCGCCGTCATCAGAATCCGGCAGAGGTTGCCAGATTTCCTGCAGTCCGTGAAGCTCAAGCATGTGAAGCTTGGGTATGGCTACTCATGCAACCCAGCTACCATTCTCATGTTCTTTCTCATCATGCCTTTGTTGGCGTCGGTTCTGACCGTCCGGTTGGAAAGCATGGACGCCGCCACGCTACTCGCCGGTTCCGGCCTGGTTCTCTTCTTCTTAGGCCTCTACTGGTCCAAGCGGTCGACACCTGTTTACCTGGTGAACTTCTCCTGCTACAAACCCGACGAGGGAAGAAAAATGTCAATGGAGGATTTTCTCAAGATGACGGAAGAGACCGGCGCCTTCAGCCCTGACTCATTCGAGTTTCAGAGACGAATATCGAACCGGTCCGGTTTAGGCGACGAAACATACCTAACCCCAGGGATTATGTCAAAACCACCCAAACTCTCCATAGAAGAAGCCCGTTTGGAGGTTGAGACTGCCATGGTCGGTGCACTCGACTCCCTCTTAAAAAAAACAGGAGTCAAGCCAAAAGACATTGACATCCTTATCGTGACCTGCAGCGTGTTCAACCCAACGCCGTCGCTATCCGCCATGATCGTCAACCACTACAAGCTCAAAACAGACATCAAGAGCTTCAGCCTCGGCGGAATGGGCTGCAGCGCCGGCCTAATCTCCATCGACCTCGCCAAGGACCTCTTGAAATACGAGCTTGTCCACACAGTCCGAACCCACAAGGGCGCCGACGAGCGGTCTTACCGGTGCGTCTACCAGCGGGAGGACGACGAGGGAAAGGTCGGCGTCTCCCTCTCGCGGGAGTTGATGGCAGTGGCCGGAGACGCGCTGAAGACAAATATAACCACGTTGGGGCTGCTGGTGCTACCGTTCTCGGAGCAATTCTTCTTCTTCGTGACGCTGATCAGGAAGAAGTTCTCGAAGGTGAAGGTGAAGCCGTACATACCAGACTTCAAGCTAGCGTTTGAGCACTTTTGCATCCATGCAGGCGGGAGGGCGGTGCTGGATGAGATTCAAAAGAACCTGCAGCTGACAGAGAAGCATATGGAGCCGTCGAGGATGACGCTGCACCGGTTCGGGAACACGTCGAGTAGCTCGCTGTGGTACGAGCTGGCGTACGCGGAGGCCAAGGGGCGGGTTGGGCTGGGAGATCGGATCTGGCAGATCGCGTTCGGGTCGGGTTTCAAGTGCAACAGTGCAGTTTGGAAGGCGCTGAGGCCAGTCGCTGAGGGGGACGCGCTGGGGAACCCGTGGATGGACTCGATAGATAGGTACCCGGTCAAGGTTCCGGTTGCGCTCTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009922 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0022626 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0050896 GO:0071704 GO:1901568 GO:1901570 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

462

Amino Acids

51.61

Weight (kDa)

8.74

Isoelectric Point (pI)

34.74

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	100 - 258	5e-65	FAE1/Type III polyketide synthase-like protein
FAE1_CUT1_RppA	PF08392	258 - 333	3.1e-29	FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C	PF08541	351 - 431	6e-11	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C	PF02797	353 - 404	6e-08	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

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Orthologous Genes (Group: OG0015371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01120
fragaria_vesca	FvH4_7g17440
malus_domestica	MD01G1087400.v1.1 MD07G1157600.v1.1
prunus_persica	Prupe.2G196000_v2.0.a1
pyrus_communis	pycom01g11140 pycom07g15410
rosa_chinensis	RchiOBHm_Chr1g0360891
rosa_laevigata	RLG00000027773 RLG00000027775
rosa_multiflora	Rmu_sc0000677.1_g000044
rosa_rugosa	Rorug01G0282900
rosa_samantha	Rh1AG294400 Rh1BG259400 Rh1DG289400
rosa_wichuraiana	Rw1G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	635, 1116
Acc65I	GGTACC	1 cut(s)	1356
AccB1I	GGYRCC	3 cut(s)	407, 809, 1356
AccBSI	CCGCTC	1 cut(s)	820
AccI	GTMKAC	2 cut(s)	311, 837
AccII	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
AclWI	GGATC	1 cut(s)	1247
AcoI	YGGCCR	1 cut(s)	900
AcuI	CTGAAG	3 cut(s)	397, 691, 935
AcyI	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
AfaI	GTAC	4 cut(s)	1025, 1190, 1202, 1358
AflIII	ACRYGT	1 cut(s)	1167
AgeI	ACCGGT	3 cut(s)	453, 828, 1155
AgsI	TTSAA	6 cut(s)	58, 640, 772, 1039, 1100, 1270
AhdI	GACNNNNNGTC	1 cut(s)	820
AjiI	CACGTC	1 cut(s)	1170
AjnI	CCWGG	3 cut(s)	270, 324, 487
Alw21I	GWGCWC	2 cut(s)	565, 1056
Alw26I	GTCTC	6 cut(s)	28, 395, 433, 539, 877, 900
Alw44I	GTGCAC	1 cut(s)	561
AlwI	GGATC	1 cut(s)	1247
AlwNI	CAGNNNCTG	1 cut(s)	1310
AoxI	GGCC	6 cut(s)	268, 289, 736, 900, 1209, 1301
ApaLI	GTGCAC	1 cut(s)	561
ApeKI	GCWGC	6 cut(s)	630, 726, 729, 940, 1111, 1150
AsiGI	ACCGGT	3 cut(s)	453, 828, 1155
Asp700I	GAANNNNTTC	1 cut(s)	998
Asp718I	GGTACC	1 cut(s)	1356
AspLEI	GCGC	7 cut(s)	410, 734, 812, 913, 1297, 1324, 1381
AspS9I	GGNCC	3 cut(s)	300, 456, 763
AsuC2I	CCSGG	1 cut(s)	1361
AsuHPI	GGTGA	3 cut(s)	340, 1021, 1027
AsuNHI	GCTAGC	1 cut(s)	1042
AvaII	GGWCC	3 cut(s)	300, 456, 763
BaeGI	GKGCMC	1 cut(s)	565
BanI	GGYRCC	3 cut(s)	407, 809, 1356
BbsI	GAAGAC	1 cut(s)	923
Bbv12I	GWGCWC	2 cut(s)	565, 1056
BbvCI	CCTCAGC	2 cut(s)	1298, 1311
BbvI	GCAGC	6 cut(s)	642, 713, 741, 927, 1123, 1137
BccI	CCATC	5 cut(s)	16, 43, 755, 886, 1333
BceAI	ACGGC	4 cut(s)	62, 634, 1006, 1120
BciT130I	CCWGG	3 cut(s)	272, 326, 489
BclI	TGATCA	1 cut(s)	987
BcnI	CCSGG	1 cut(s)	1361
BcoDI	GTCTC	6 cut(s)	28, 395, 433, 539, 877, 900
BfaI	CTAG	2 cut(s)	1043, 1384
BfmI	CTRYAG	4 cut(s)	113, 628, 727, 1109
BfoI	RGCGCY	4 cut(s)	411, 735, 813, 1298
BfuAI	ACCTGC	2 cut(s)	635, 1116
BisI	GCNGC	7 cut(s)	246, 631, 727, 730, 941, 1112, 1151
BlsI	GCNGC	7 cut(s)	247, 632, 728, 731, 942, 1113, 1152
Bme1390I	CCNGG	4 cut(s)	272, 326, 489, 1361
Bme18I	GGWCC	3 cut(s)	300, 456, 763
BmeRI	GACNNNNNGTC	1 cut(s)	820
BmgBI	CACGTC	1 cut(s)	1170
BmgT120I	GGNCC	3 cut(s)	300, 456, 763
BmiI	GGNNCC	7 cut(s)	265, 409, 811, 1134, 1331, 1358, 1371
BmrFI	CCNGG	4 cut(s)	272, 326, 489, 1361
BmsI	GCATC	1 cut(s)	1071
BmtI	GCTAGC	1 cut(s)	1046
BpiI	GAAGAC	1 cut(s)	923
Bpu10I	CCTNAGC	2 cut(s)	1298, 1311
BpuEI	CTTGAG	2 cut(s)	113, 371
BpuMI	CCSGG	1 cut(s)	1361
BsaHI	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
BsaI	GGTCTC	1 cut(s)	395
BsaJI	CCNNGG	7 cut(s)	487, 488, 552, 712, 759, 1212, 1334
BsaWI	WCCGGW	6 cut(s)	225, 453, 458, 828, 1155, 1372
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 56, 80, 86
Bse118I	RCCGGY	6 cut(s)	260, 404, 453, 734, 828, 1155
Bse1I	ACTGG	2 cut(s)	302, 1304
BseBI	CCWGG	3 cut(s)	272, 326, 489
BseDI	CCNNGG	7 cut(s)	487, 488, 552, 712, 759, 1212, 1334
BseGI	GGATG	5 cut(s)	612, 1062, 1096, 1149, 1344
BseMII	CTCAG	2 cut(s)	1289, 1302
BseNI	ACTGG	2 cut(s)	302, 1304
BseRI	GAGGAG	2 cut(s)	58, 61
BseSI	GKGCMC	1 cut(s)	565
BseXI	GCAGC	6 cut(s)	642, 713, 741, 927, 1123, 1137
BseYI	CCCAGC	3 cut(s)	166, 1228, 1324
BsgI	GTGCAG	2 cut(s)	1136, 1302
Bsh1236I	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
Bsh1285I	CGRYCG	1 cut(s)	311
BshFI	GGCC	6 cut(s)	270, 291, 738, 902, 1211, 1303
BshNI	GGYRCC	3 cut(s)	407, 809, 1356
BshTI	ACCGGT	3 cut(s)	453, 828, 1155
BsiEI	CGRYCG	1 cut(s)	311
BsiHKAI	GWGCWC	2 cut(s)	565, 1056
BsiWI	CGTACG	1 cut(s)	1200
BslFI	GGGAC	1 cut(s)	1331
BsmAI	GTCTC	6 cut(s)	28, 395, 433, 539, 877, 900
BsmBI	CGTCTC	3 cut(s)	433, 877, 900
BsmFI	GGGAC	1 cut(s)	1331
BsnI	GGCC	6 cut(s)	270, 291, 738, 902, 1211, 1303
Bso31I	GGTCTC	1 cut(s)	395
Bsp1286I	GDGCHC	2 cut(s)	565, 1056
Bsp143I	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
Bsp19I	CCATGG	1 cut(s)	552
BspANI	GGCC	6 cut(s)	270, 291, 738, 902, 1211, 1303
BspCNI	CTCAG	2 cut(s)	1290, 1303
BspFNI	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
BspLI	GGNNCC	7 cut(s)	265, 409, 811, 1134, 1331, 1358, 1371
BspMAI	CTGCAG	4 cut(s)	117, 632, 731, 1113
BspMI	ACCTGC	2 cut(s)	635, 1116
BspOI	GCTAGC	1 cut(s)	1046
BspPI	GGATC	1 cut(s)	1247
BspT107I	GGYRCC	3 cut(s)	407, 809, 1356
BspTNI	GGTCTC	1 cut(s)	395
BsrBI	CCGCTC	1 cut(s)	820
BsrFI	RCCGGY	6 cut(s)	260, 404, 453, 734, 828, 1155
BsrI	ACTGG	2 cut(s)	302, 1304
BssAI	RCCGGY	6 cut(s)	260, 404, 453, 734, 828, 1155
BssECI	CCNNGG	7 cut(s)	487, 488, 552, 712, 759, 1212, 1334
BssMI	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
BssNI	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
BssT1I	CCWWGG	3 cut(s)	552, 759, 1212
Bst2UI	CCWGG	3 cut(s)	272, 326, 489
Bst4CI	ACNGT	4 cut(s)	223, 793, 954, 1280
Bst6I	CTCTTC	2 cut(s)	284, 393
BstACI	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
BstAPI	GCANNNNNTGC	1 cut(s)	100
BstC8I	GCNNGC	5 cut(s)	736, 1044, 1072, 1181, 1197
BstDEI	CTNAG	3 cut(s)	286, 1298, 1311
BstDSI	CCRYGG	2 cut(s)	552, 1334
BstENI	CCTNNNNNAGG	1 cut(s)	758
BstF5I	GGATG	5 cut(s)	612, 1062, 1096, 1149, 1344
BstFNI	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
BstH2I	RGCGCY	4 cut(s)	411, 735, 813, 1298
BstHHI	GCGC	7 cut(s)	410, 734, 812, 913, 1297, 1324, 1381
BstKTI	GATC	5 cut(s)	669, 990, 1237, 1242, 1251
BstMAI	GTCTC	6 cut(s)	28, 395, 433, 539, 877, 900
BstMBI	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
BstMCI	CGRYCG	1 cut(s)	311
BstNI	CCWGG	3 cut(s)	272, 326, 489
BstNSI	RCATGY	1 cut(s)	137
BstSCI	CCNGG	4 cut(s)	270, 324, 487, 1359
BstSFI	CTRYAG	4 cut(s)	113, 628, 727, 1109
BstSLI	GKGCMC	1 cut(s)	565
BstUI	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
BstV1I	GCAGC	6 cut(s)	642, 713, 741, 927, 1123, 1137
BstV2I	GAAGAC	1 cut(s)	923
BstX2I	RGATCY	1 cut(s)	1239
BstYI	RGATCY	1 cut(s)	1239
BsuRI	GGCC	6 cut(s)	270, 291, 738, 902, 1211, 1303
BtgI	CCRYGG	2 cut(s)	552, 1334
BtrI	CACGTC	1 cut(s)	1170
BtsCI	GGATG	5 cut(s)	612, 1062, 1096, 1149, 1344
BtsI	GCAGTG	1 cut(s)	903
BtsIMutI	CAGTG	2 cut(s)	903, 1285
BveI	ACCTGC	2 cut(s)	635, 1116
Cac8I	GCNNGC	5 cut(s)	736, 1044, 1072, 1181, 1197
CaiI	CAGNNNCTG	1 cut(s)	1310
CfoI	GCGC	7 cut(s)	410, 734, 812, 913, 1297, 1324, 1381
Cfr10I	RCCGGY	6 cut(s)	260, 404, 453, 734, 828, 1155
Cfr13I	GGNCC	3 cut(s)	300, 456, 763
CpoI	CGGWCCG	1 cut(s)	456
CseI	GACGC	8 cut(s)	198, 251, 823, 859, 917, 991, 1156, 1328
CsiI	ACCWGGT	1 cut(s)	324
Csp6I	GTAC	4 cut(s)	1024, 1189, 1201, 1357
CspAI	ACCGGT	3 cut(s)	453, 828, 1155
CspI	CGGWCCG	1 cut(s)	456
CviAII	CATG	8 cut(s)	134, 159, 181, 196, 238, 553, 664, 1067
CviQI	GTAC	4 cut(s)	1024, 1189, 1201, 1357
DdeI	CTNAG	3 cut(s)	286, 1298, 1311
DinI	GGCGCC	2 cut(s)	409, 811
DpnI	GATC	5 cut(s)	668, 989, 1236, 1241, 1250
DpnII	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
DriI	GACNNNNNGTC	1 cut(s)	820
EaeI	YGGCCR	1 cut(s)	900
Eam1104I	CTCTTC	2 cut(s)	284, 393
Eam1105I	GACNNNNNGTC	1 cut(s)	820
EarI	CTCTTC	2 cut(s)	284, 393
EciI	GGCGGA	3 cut(s)	64, 649, 732
Eco130I	CCWWGG	3 cut(s)	552, 759, 1212
Eco147I	AGGCCT	1 cut(s)	291
Eco31I	GGTCTC	1 cut(s)	395
Eco47I	GGWCC	3 cut(s)	300, 456, 763
Eco57I	CTGAAG	3 cut(s)	397, 691, 935
EcoNI	CCTNNNNNAGG	1 cut(s)	758
EcoO109I	RGGNCCY	1 cut(s)	763
EcoRII	CCWGG	3 cut(s)	270, 324, 487
EcoT14I	CCWWGG	3 cut(s)	552, 759, 1212
EgeI	GGCGCC	2 cut(s)	409, 811
EheI	GGCGCC	2 cut(s)	409, 811
ErhI	CCWWGG	3 cut(s)	552, 759, 1212
Esp3I	CGTCTC	3 cut(s)	433, 877, 900
FaeI	CATG	8 cut(s)	137, 162, 184, 199, 241, 556, 667, 1070
FalI	AAGNNNNNCTT	2 cut(s)	752, 784
FaqI	GGGAC	1 cut(s)	1331
FatI	CATG	8 cut(s)	133, 158, 180, 195, 237, 552, 663, 1066
FauI	CCCGC	4 cut(s)	837, 876, 1067, 1212
FauNDI	CATATG	1 cut(s)	1128
FbaI	TGATCA	1 cut(s)	987
FblI	GTMKAC	2 cut(s)	311, 837
Fnu4HI	GCNGC	7 cut(s)	246, 631, 727, 730, 941, 1112, 1151
FokI	GGATG	5 cut(s)	599, 1049, 1103, 1156, 1351
Fsp4HI	GCNGC	7 cut(s)	246, 631, 727, 730, 941, 1112, 1151
FspBI	CTAG	2 cut(s)	1043, 1384
GlaI	GCGC	7 cut(s)	409, 733, 811, 912, 1296, 1323, 1380
GluI	GCNGC	7 cut(s)	246, 631, 727, 730, 941, 1112, 1151
GsaI	CCCAGC	3 cut(s)	170, 1232, 1328
HaeII	RGCGCY	4 cut(s)	411, 735, 813, 1298
HaeIII	GGCC	6 cut(s)	270, 291, 738, 902, 1211, 1303
HgaI	GACGC	8 cut(s)	198, 251, 823, 859, 917, 991, 1156, 1328
HhaI	GCGC	7 cut(s)	410, 734, 812, 913, 1297, 1324, 1381
Hin1I	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
Hin1II	CATG	8 cut(s)	137, 162, 184, 199, 241, 556, 667, 1070
Hin6I	GCGC	7 cut(s)	408, 732, 810, 911, 1295, 1322, 1379
HinP1I	GCGC	7 cut(s)	408, 732, 810, 911, 1295, 1322, 1379
HincII	GTYRAC	2 cut(s)	312, 673
HindII	GTYRAC	2 cut(s)	312, 673
HindIII	AAGCTT	1 cut(s)	140
HinfI	GANTC	7 cut(s)	65, 87, 422, 569, 591, 1096, 1343
HphI	GGTGA	3 cut(s)	340, 1021, 1027
Hpy166II	GTNNAC	7 cut(s)	312, 322, 331, 563, 673, 787, 838
Hpy188I	TCNGA	6 cut(s)	86, 219, 438, 797, 961, 1239
Hpy188III	TCNNGA	8 cut(s)	388, 622, 700, 769, 979, 991, 1003, 1162
Hpy8I	GTNNAC	7 cut(s)	312, 322, 331, 563, 673, 787, 838
Hpy99I	CGWCG	8 cut(s)	214, 356, 473, 655, 818, 857, 1141, 1174
HpyAV	CCTTC	4 cut(s)	421, 1000, 1006, 1285
HpyCH4III	ACNGT	4 cut(s)	223, 793, 954, 1280
HpyCH4IV	ACGT	2 cut(s)	932, 1169
HpyF3I	CTNAG	3 cut(s)	286, 1298, 1311
HpySE526I	ACGT	2 cut(s)	932, 1169
Hsp92I	GRCGYC	5 cut(s)	209, 243, 408, 810, 870
Hsp92II	CATG	8 cut(s)	137, 162, 184, 199, 241, 556, 667, 1070
HspAI	GCGC	7 cut(s)	408, 732, 810, 911, 1295, 1322, 1379
KasI	GGCGCC	2 cut(s)	407, 809
KpnI	GGTACC	1 cut(s)	1360
KroI	GCCGGC	1 cut(s)	734
KroNI	GCCGGC	1 cut(s)	736
Ksp22I	TGATCA	1 cut(s)	987
Kzo9I	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
LmnI	GCTCC	2 cut(s)	961, 1132
Lsp1109I	GCAGC	6 cut(s)	642, 713, 741, 927, 1123, 1137
LweI	GCATC	1 cut(s)	1071
MabI	ACCWGGT	1 cut(s)	324
MaeI	CTAG	2 cut(s)	1043, 1384
MaeII	ACGT	2 cut(s)	932, 1169
MaeIII	GTNAC	3 cut(s)	8, 622, 979
MalI	GATC	5 cut(s)	668, 989, 1236, 1241, 1250
MbiI	CCGCTC	1 cut(s)	820
MboI	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
MflI	RGATCY	1 cut(s)	1239
MhlI	GDGCHC	2 cut(s)	565, 1056
MluCI	AATT	1 cut(s)	965
Mly113I	GGCGCC	2 cut(s)	408, 810
MlyI	GAGTC	5 cut(s)	59, 416, 563, 600, 1337
MmeI	TCCRAC	1 cut(s)	210
MroNI	GCCGGC	1 cut(s)	734
MroXI	GAANNNNTTC	1 cut(s)	998
MseI	TTAA	1 cut(s)	578
MslI	CAYNNNNRTG	2 cut(s)	20, 179
MspA1I	CMGCKG	2 cut(s)	844, 1114
MspR9I	CCNGG	4 cut(s)	272, 326, 489, 1361
MvaI	CCWGG	3 cut(s)	272, 326, 489
MvnI	CGCG	5 cut(s)	883, 911, 1205, 1253, 1322
NaeI	GCCGGC	1 cut(s)	736
NarI	GGCGCC	2 cut(s)	408, 810
NciI	CCSGG	1 cut(s)	1361
NcoI	CCATGG	1 cut(s)	552
NdeI	CATATG	1 cut(s)	1128
NdeII	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
NgoMIV	GCCGGC	1 cut(s)	734
NheI	GCTAGC	1 cut(s)	1042
NlaIII	CATG	8 cut(s)	137, 162, 184, 199, 241, 556, 667, 1070
NlaIV	GGNNCC	7 cut(s)	265, 409, 811, 1134, 1331, 1358, 1371
NmeAIII	GCCGAG	1 cut(s)	693
NmuCI	GTSAC	2 cut(s)	622, 979
NspI	RCATGY	1 cut(s)	137
PasI	CCCWGGG	1 cut(s)	488
PceI	AGGCCT	1 cut(s)	291
PcsI	WCGNNNNNNNCGW	1 cut(s)	564
PdiI	GCCGGC	1 cut(s)	736
PdmI	GAANNNNTTC	1 cut(s)	998
PfeI	GAWTC	2 cut(s)	87, 1096
Pfl23II	CGTACG	1 cut(s)	1200
PinAI	ACCGGT	3 cut(s)	453, 828, 1155
PkrI	GCNGC	7 cut(s)	247, 632, 728, 731, 942, 1113, 1152
PleI	GAGTC	5 cut(s)	59, 416, 563, 599, 1337
PluTI	GGCGCC	2 cut(s)	411, 813
PpsI	GAGTC	5 cut(s)	59, 416, 563, 599, 1337
PpuMI	RGGWCCY	1 cut(s)	763
Psp5II	RGGWCCY	1 cut(s)	763
Psp6I	CCWGG	3 cut(s)	270, 324, 487
PspFI	CCCAGC	3 cut(s)	166, 1228, 1324
PspGI	CCWGG	3 cut(s)	270, 324, 487
PspLI	CGTACG	1 cut(s)	1200
PspN4I	GGNNCC	7 cut(s)	265, 409, 811, 1134, 1331, 1358, 1371
PspPI	GGNCC	3 cut(s)	300, 456, 763
PspPPI	RGGWCCY	1 cut(s)	763
PstI	CTGCAG	4 cut(s)	117, 632, 731, 1113
PstNI	CAGNNNCTG	1 cut(s)	1310
PsuI	RGATCY	1 cut(s)	1239
PvuII	CAGCTG	1 cut(s)	1114
RsaI	GTAC	4 cut(s)	1025, 1190, 1202, 1358
RsaNI	GTAC	4 cut(s)	1024, 1189, 1201, 1357
RseI	CAYNNNNRTG	2 cut(s)	20, 179
Rsr2I	CGGWCCG	1 cut(s)	456
RsrII	CGGWCCG	1 cut(s)	456
SalI	GTCGAC	1 cut(s)	310
SaqAI	TTAA	1 cut(s)	578
SatI	GCNGC	7 cut(s)	246, 631, 727, 730, 941, 1112, 1151
Sau3AI	GATC	5 cut(s)	666, 987, 1234, 1239, 1248
Sau96I	GGNCC	3 cut(s)	300, 456, 763
SchI	GAGTC	5 cut(s)	59, 416, 563, 600, 1337
ScrFI	CCNGG	4 cut(s)	272, 326, 489, 1361
SduI	GDGCHC	2 cut(s)	565, 1056
SexAI	ACCWGGT	1 cut(s)	324
SfaNI	GCATC	1 cut(s)	1071
SfcI	CTRYAG	4 cut(s)	113, 628, 727, 1109
SfoI	GGCGCC	2 cut(s)	409, 811
SinI	GGWCC	3 cut(s)	300, 456, 763
SmiMI	CAYNNNNRTG	2 cut(s)	20, 179
SmlI	CTYRAG	2 cut(s)	128, 386
SmoI	CTYRAG	2 cut(s)	128, 386
Sse9I	AATT	1 cut(s)	965
SseBI	AGGCCT	1 cut(s)	291
SspDI	GGCGCC	2 cut(s)	407, 809
SspMI	CTAG	2 cut(s)	1043, 1384
StuI	AGGCCT	1 cut(s)	291
StyD4I	CCNGG	4 cut(s)	270, 324, 487, 1359
StyI	CCWWGG	3 cut(s)	552, 759, 1212
TaaI	ACNGT	4 cut(s)	223, 793, 954, 1280
TaiI	ACGT	2 cut(s)	935, 1172
TaqI	TCGA	9 cut(s)	311, 429, 449, 567, 750, 1004, 1139, 1172, 1346
TasI	AATT	1 cut(s)	965
TauI	GCSGC	1 cut(s)	248
TfiI	GAWTC	2 cut(s)	87, 1096
Tru1I	TTAA	1 cut(s)	578
Tru9I	TTAA	1 cut(s)	578
TscAI	CASTG	2 cut(s)	903, 1285
TseFI	GTSAC	2 cut(s)	622, 979
TseI	GCWGC	6 cut(s)	630, 726, 729, 940, 1111, 1150
Tsp45I	GTSAC	2 cut(s)	622, 979
TspGWI	ACGGA	2 cut(s)	109, 410
TspRI	CASTG	2 cut(s)	903, 1285
VneI	GTGCAC	1 cut(s)	561
VpaK11BI	GGWCC	3 cut(s)	300, 456, 763
XagI	CCTNNNNNAGG	1 cut(s)	758
XceI	RCATGY	1 cut(s)	137
XmiI	GTMKAC	2 cut(s)	311, 837
XmnI	GAANNNNTTC	1 cut(s)	998
XspI	CTAG	2 cut(s)	1043, 1384

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.