Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr6

Orthogroup ID

OG0015371

Physical Location & Seq

Genomic Coordinates Reverse (-)

15071025 .. 15073519

Gene Structure 2495 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000027775

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1737 bp

ATGGAGAGTAACAGCATAGAGATGGATAAGGAGAGACTTACTGCGGAGATGGATTTCAACAAGGACTCCTCCTCCGCCGTCATCAGAATCCGGCAGCGCTTGCCGGATTTCCTGCAGTCCGTGAAGCTCAAGTATGTGAAGCTTGGGTATGGCTACTCATGCAACCCAGCTCCCATTCTCATGTTCCTTCTCATCACGCCTTTGTTGGCGTCGGTTCTGGTACAGCTCACGGGTGTCGACATAACCCGATTCGTCTCCGAGGTCTGGACCAACCAGGCCGTCCGGCTGGAAAGCATGGACGCCGCCACTCGACTCGCCGGTTCCGGCCTGGTTCTCTTCTTCTTAGCCCTCTACTGGTCCAAGCGGTCCACACCTGTTTACCTGGTGAACTTCTCCTGCTACAAACCCGACGAGGAAAGAAAAATGTCGATGGAGGATTTTCTCAAGATGACGGAAGAGACCGGCGCCTTCAGCCCTGACTCATTCGAGTTTCAGAGACGAATATCGAACCGGTCCGGTTTAGGAGACGAAACATACCTAACCCCAGGGATTATGTCAAAACCACCCAAACTCTCCATAGAAGAAGCCCGTTTGGAGGCCGAGACCGCCATGGTCGGCGCACTCGACTCCCTCTTCAAAAAAACCGGAGTCAAGCCGAAAGACATTGACATCCTTATCGTGAACTGCAGCTTGTTCAACCCAACGCCGTCGCTGTCCGCCATGATCGTCAACCACTACAAGCTCAAAACAGACATCAAGAGCTTCAGCCTCGGCGGAATGGGCTGCAGCGCCGGCCTAATCTCCATCGACCTCGCCAAGGACCTCTTGAAAGCCATCCCCAACTCCTACGCCGTCGTAGTCAGCACCGAGAGCATCACCTTGAACTGGTACTTCGGCAACGACAAGTCGATGCTGCTCCCCAACTGTATTTTCCGGTCCGGCGGCGCCGCGATCCTCCTCTCCAACAAGCGCAAGGACCGCGCCCGGTCCAAGTACGAGCTCGTCCACACCGTCCGGACCCACAAGGGCGCCGACGAGCGGTCCTACCGGTGCGTCTACCAGCGGGAGGACGACAAGGGAAAGGTCGGCGTCTCCCTCGCGCGGGAGCTGATGGCGGTGGCCGGAGACGCGCTGAAGACGAATATAACCACCCTGGGGCCGCTGGTACTGCCTTTCTCGGAGCAATTCTTCTTCTTCGTGACGCTGATCAGGAAGAAGTTCTCGAAGGCGAAGGTGAAGCCGTACATACCGGACTTCAAGCTGGCGTTCGAGCACTTCTGCATCCACGCCGGCGGGAGGGCTGTGCTGGATGAGATTCAGAAGAACCTGCAGCTGACGGAGAGGCATATGGAGCCGTCCAGGATGACGCTGCACCGGTTCGGGAACACGTCGAGTAGCTCGCTGTGGTACGAGCTGGCGTACGCGGAGGCCAAGGGGCGGGTCGGGCGGGGGGATCGGATCTGGCAGATTGCGTTCGGGTCGGGTTTCAAGTGCAACAGCGCGGTTTGGCGGGCGCTGAGGCCAGTCGCTGAGGGGGACGCGCTGGGGAACCCGTGGATGGACTCGATAGATAGTCATTGCATTCAGACGTCGGTCGAGAGTCCTGCGTCTCCTCGTATAGACCTCCTCGTCATCGACGAGCTAGCGATCCAGAACAGAGACGTCGCCGTTTGCTTCAAATTCCTTCCTAGAAGCCACCTTGCGTCATCACCGTTTGCTTCGGATAAAGGTATCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009922 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0022626 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0050896 GO:0071704 GO:1901568 GO:1901570 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

579

Amino Acids

64.61

Weight (kDa)

8.94

Isoelectric Point (pI)

35.81

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
FAE1_CUT1_RppA	PF08392	119 - 406	3.8e-136	FAE1/Type III polyketide synthase-like protein
ACP_syn_III_C	PF08541	424 - 504	9.6e-12	3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal
Chal_sti_synt_C	PF02797	426 - 504	9.1e-08	Chalcone and stilbene synthases, C-terminal domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01120
fragaria_vesca	FvH4_7g17440
malus_domestica	MD01G1087400.v1.1 MD07G1157600.v1.1
prunus_persica	Prupe.2G196000_v2.0.a1
pyrus_communis	pycom01g11140 pycom07g15410
rosa_chinensis	RchiOBHm_Chr1g0360891
rosa_laevigata	RLG00000027773 RLG00000027775
rosa_multiflora	Rmu_sc0000677.1_g000044
rosa_rugosa	Rorug01G0282900
rosa_samantha	Rh1AG294400 Rh1BG259400 Rh1DG289400
rosa_wichuraiana	Rw1G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AasI	GACNNNNNNGTC	1 cut(s)	1628
AatII	GACGTC	2 cut(s)	1592, 1665
Acc36I	ACCTGC	1 cut(s)	1335
AccB1I	GGYRCC	3 cut(s)	464, 944, 1028
AccBSI	CCGCTC	1 cut(s)	1039
AccI	GTMKAC	2 cut(s)	237, 1056
AccII	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
AccIII	TCCGGA	1 cut(s)	1014
AclWI	GGATC	4 cut(s)	946, 1461, 1466, 1642
AcoI	YGGCCR	1 cut(s)	1119
AcsI	RAATTY	1 cut(s)	1679
AcuI	CTGAAG	3 cut(s)	454, 748, 1154
AcyI	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
AfaI	GTAC	7 cut(s)	222, 890, 995, 1167, 1244, 1409, 1421
AfeI	AGCGCT	1 cut(s)	98
AflIII	ACRYGT	1 cut(s)	1386
AgeI	ACCGGT	3 cut(s)	510, 1047, 1374
AgsI	TTSAA	8 cut(s)	58, 637, 697, 829, 883, 1258, 1489, 1678
AhdI	GACNNNNNGTC	1 cut(s)	1039
AjiI	CACGTC	1 cut(s)	1389
AjnI	CCWGG	6 cut(s)	273, 327, 381, 544, 1152, 1358
AjuI	GAANNNNNNNTTGG	2 cut(s)	914, 946
Alw21I	GWGCWC	2 cut(s)	1002, 1275
AlwI	GGATC	4 cut(s)	946, 1461, 1466, 1642
AlwNI	CAGNNNCTG	1 cut(s)	1529
Aor13HI	TCCGGA	1 cut(s)	1014
Aor51HI	AGCGCT	1 cut(s)	98
AoxI	GGCC	8 cut(s)	276, 325, 597, 793, 1119, 1157, 1428, 1520
ApeKI	GCWGC	7 cut(s)	94, 687, 783, 786, 913, 1330, 1369
ApoI	RAATTY	1 cut(s)	1679
AsiGI	ACCGGT	3 cut(s)	510, 1047, 1374
Asp700I	GAANNNNTTC	1 cut(s)	1217
AsuC2I	CCSGG	1 cut(s)	985
AsuHPI	GGTGA	4 cut(s)	397, 868, 1246, 1701
AsuNHI	GCTAGC	1 cut(s)	1642
BanI	GGYRCC	3 cut(s)	464, 944, 1028
BanII	GRGCYC	1 cut(s)	1002
BbsI	GAAGAC	1 cut(s)	1142
Bbv12I	GWGCWC	2 cut(s)	1002, 1275
BbvCI	CCTCAGC	2 cut(s)	1517, 1530
BbvI	GCAGC	7 cut(s)	106, 699, 770, 798, 900, 1342, 1356
BccI	CCATC	7 cut(s)	16, 43, 424, 812, 842, 1105, 1552
BceAI	ACGGC	7 cut(s)	62, 263, 691, 836, 1225, 1339, 1652
BcgI	CGANNNNNNTGC	2 cut(s)	1586, 1620
BciT130I	CCWGG	6 cut(s)	275, 329, 383, 546, 1154, 1360
BclI	TGATCA	1 cut(s)	1206
BcnI	CCSGG	1 cut(s)	985
BfaI	CTAG	2 cut(s)	1643, 1689
BfmI	CTRYAG	4 cut(s)	113, 685, 784, 1328
BfoI	RGCGCY	6 cut(s)	100, 468, 792, 948, 1032, 1517
BfuAI	ACCTGC	1 cut(s)	1335
Bme1390I	CCNGG	7 cut(s)	275, 329, 383, 546, 985, 1154, 1360
BmeRI	GACNNNNNGTC	1 cut(s)	1039
BmgBI	CACGTC	1 cut(s)	1389
BmiI	GGNNCC	8 cut(s)	322, 466, 946, 1019, 1030, 1158, 1353, 1550
BmrFI	CCNGG	7 cut(s)	275, 329, 383, 546, 985, 1154, 1360
BmsI	GCATC	3 cut(s)	882, 900, 1290
BmtI	GCTAGC	1 cut(s)	1646
BoxI	GACNNNNGTC	1 cut(s)	1592
BpiI	GAAGAC	1 cut(s)	1142
Bpu10I	CCTNAGC	2 cut(s)	1517, 1530
BpuEI	CTTGAG	2 cut(s)	113, 428
BpuMI	CCSGG	1 cut(s)	985
BsaHI	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
BsaI	GGTCTC	2 cut(s)	452, 596
BsaWI	WCCGGW	8 cut(s)	510, 515, 644, 933, 1014, 1047, 1249, 1374
BsaXI	ACNNNNNCTCC	4 cut(s)	50, 56, 80, 86
Bse118I	RCCGGY	7 cut(s)	317, 461, 510, 791, 1047, 1289, 1374
Bse1I	ACTGG	3 cut(s)	359, 890, 1523
Bse3DI	GCAATG	1 cut(s)	1576
BseAI	TCCGGA	1 cut(s)	1014
BseBI	CCWGG	6 cut(s)	275, 329, 383, 546, 1154, 1360
BseGI	GGATG	6 cut(s)	669, 834, 1281, 1315, 1368, 1563
BseMI	GCAATG	1 cut(s)	1576
BseMII	CTCAG	2 cut(s)	1508, 1521
BseNI	ACTGG	3 cut(s)	359, 890, 1523
BseRI	GAGGAG	5 cut(s)	58, 61, 947, 1602, 1616
BseXI	GCAGC	7 cut(s)	106, 699, 770, 798, 900, 1342, 1356
BseYI	CCCAGC	2 cut(s)	166, 1543
BsgI	GTGCAG	1 cut(s)	1355
Bsh1236I	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
Bsh1285I	CGRYCG	1 cut(s)	1596
BshFI	GGCC	8 cut(s)	278, 327, 599, 795, 1121, 1159, 1430, 1522
BshNI	GGYRCC	3 cut(s)	464, 944, 1028
BshTI	ACCGGT	3 cut(s)	510, 1047, 1374
BsiEI	CGRYCG	1 cut(s)	1596
BsiHKAI	GWGCWC	2 cut(s)	1002, 1275
BsiWI	CGTACG	1 cut(s)	1419
BslFI	GGGAC	1 cut(s)	1550
BsmBI	CGTCTC	7 cut(s)	259, 490, 519, 1096, 1119, 1614, 1653
BsmFI	GGGAC	1 cut(s)	1550
BsmI	GAATGC	1 cut(s)	1581
BsnI	GGCC	8 cut(s)	278, 327, 599, 795, 1121, 1159, 1430, 1522
Bso31I	GGTCTC	2 cut(s)	452, 596
Bsp1286I	GDGCHC	2 cut(s)	1002, 1275
Bsp13I	TCCGGA	1 cut(s)	1014
Bsp143I	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
Bsp19I	CCATGG	1 cut(s)	609
BspANI	GGCC	8 cut(s)	278, 327, 599, 795, 1121, 1159, 1430, 1522
BspCNI	CTCAG	2 cut(s)	1509, 1522
BspEI	TCCGGA	1 cut(s)	1014
BspFNI	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
BspLI	GGNNCC	8 cut(s)	322, 466, 946, 1019, 1030, 1158, 1353, 1550
BspMAI	CTGCAG	4 cut(s)	117, 689, 788, 1332
BspMI	ACCTGC	1 cut(s)	1335
BspOI	GCTAGC	1 cut(s)	1646
BspPI	GGATC	4 cut(s)	946, 1461, 1466, 1642
BspT107I	GGYRCC	3 cut(s)	464, 944, 1028
BspTNI	GGTCTC	2 cut(s)	452, 596
BsrBI	CCGCTC	1 cut(s)	1039
BsrDI	GCAATG	1 cut(s)	1576
BsrFI	RCCGGY	7 cut(s)	317, 461, 510, 791, 1047, 1289, 1374
BsrI	ACTGG	3 cut(s)	359, 890, 1523
BssAI	RCCGGY	7 cut(s)	317, 461, 510, 791, 1047, 1289, 1374
BssMI	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
BssNI	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
BssT1I	CCWWGG	3 cut(s)	609, 816, 1431
Bst2UI	CCWGG	6 cut(s)	275, 329, 383, 546, 1154, 1360
Bst4CI	ACNGT	3 cut(s)	926, 1012, 1713
Bst6I	CTCTTC	3 cut(s)	341, 450, 638
BstACI	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
BstAPI	GCANNNNNTGC	1 cut(s)	100
BstC8I	GCNNGC	8 cut(s)	101, 793, 1263, 1291, 1400, 1416, 1512, 1644
BstDEI	CTNAG	3 cut(s)	343, 1517, 1530
BstDSI	CCRYGG	2 cut(s)	609, 1553
BstENI	CCTNNNNNAGG	1 cut(s)	815
BstF5I	GGATG	6 cut(s)	669, 834, 1281, 1315, 1368, 1563
BstFNI	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
BstH2I	RGCGCY	6 cut(s)	100, 468, 792, 948, 1032, 1517
BstKTI	GATC	6 cut(s)	726, 954, 1209, 1456, 1461, 1650
BstMBI	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
BstMCI	CGRYCG	1 cut(s)	1596
BstNI	CCWGG	6 cut(s)	275, 329, 383, 546, 1154, 1360
BstPAI	GACNNNNGTC	1 cut(s)	1592
BstSCI	CCNGG	7 cut(s)	273, 327, 381, 544, 983, 1152, 1358
BstSFI	CTRYAG	4 cut(s)	113, 685, 784, 1328
BstUI	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
BstV1I	GCAGC	7 cut(s)	106, 699, 770, 798, 900, 1342, 1356
BstV2I	GAAGAC	1 cut(s)	1142
BstX2I	RGATCY	1 cut(s)	1458
BstYI	RGATCY	1 cut(s)	1458
BsuRI	GGCC	8 cut(s)	278, 327, 599, 795, 1121, 1159, 1430, 1522
BtgI	CCRYGG	2 cut(s)	609, 1553
BtrI	CACGTC	1 cut(s)	1389
BtsCI	GGATG	6 cut(s)	669, 834, 1281, 1315, 1368, 1563
BveI	ACCTGC	1 cut(s)	1335
Cac8I	GCNNGC	8 cut(s)	101, 793, 1263, 1291, 1400, 1416, 1512, 1644
CaiI	CAGNNNCTG	1 cut(s)	1529
Cfr10I	RCCGGY	7 cut(s)	317, 461, 510, 791, 1047, 1289, 1374
CpoI	CGGWCCG	2 cut(s)	513, 936
CsiI	ACCWGGT	1 cut(s)	381
Csp6I	GTAC	7 cut(s)	221, 889, 994, 1166, 1243, 1408, 1420
CspAI	ACCGGT	3 cut(s)	510, 1047, 1374
CspI	CGGWCCG	2 cut(s)	513, 936
CviAII	CATG	5 cut(s)	159, 181, 295, 610, 721
CviQI	GTAC	7 cut(s)	221, 889, 994, 1166, 1243, 1408, 1420
DdeI	CTNAG	3 cut(s)	343, 1517, 1530
DinI	GGCGCC	3 cut(s)	466, 946, 1030
DpnI	GATC	6 cut(s)	725, 953, 1208, 1455, 1460, 1649
DpnII	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
DrdI	GACNNNNNNGTC	1 cut(s)	1628
DriI	GACNNNNNGTC	1 cut(s)	1039
DseDI	GACNNNNNNGTC	1 cut(s)	1628
EaeI	YGGCCR	1 cut(s)	1119
Eam1104I	CTCTTC	3 cut(s)	341, 450, 638
Eam1105I	GACNNNNNGTC	1 cut(s)	1039
EarI	CTCTTC	3 cut(s)	341, 450, 638
EciI	GGCGGA	3 cut(s)	64, 706, 789
Ecl136II	GAGCTC	1 cut(s)	1000
Eco130I	CCWWGG	3 cut(s)	609, 816, 1431
Eco24I	GRGCYC	1 cut(s)	1002
Eco31I	GGTCTC	2 cut(s)	452, 596
Eco47III	AGCGCT	1 cut(s)	98
Eco53kI	GAGCTC	1 cut(s)	1000
Eco57I	CTGAAG	3 cut(s)	454, 748, 1154
EcoICRI	GAGCTC	1 cut(s)	1000
EcoNI	CCTNNNNNAGG	1 cut(s)	815
EcoO109I	RGGNCCY	1 cut(s)	820
EcoRII	CCWGG	6 cut(s)	273, 327, 381, 544, 1152, 1358
EcoT14I	CCWWGG	3 cut(s)	609, 816, 1431
EcoT38I	GRGCYC	1 cut(s)	1002
EgeI	GGCGCC	3 cut(s)	466, 946, 1030
EheI	GGCGCC	3 cut(s)	466, 946, 1030
ErhI	CCWWGG	3 cut(s)	609, 816, 1431
Esp3I	CGTCTC	7 cut(s)	259, 490, 519, 1096, 1119, 1614, 1653
FaeI	CATG	5 cut(s)	162, 184, 298, 613, 724
FalI	AAGNNNNNCTT	2 cut(s)	809, 841
FaqI	GGGAC	1 cut(s)	1550
FatI	CATG	5 cut(s)	158, 180, 294, 609, 720
FauI	CCCGC	6 cut(s)	1056, 1095, 1286, 1431, 1440, 1503
FauNDI	CATATG	1 cut(s)	1347
FbaI	TGATCA	1 cut(s)	1206
FblI	GTMKAC	2 cut(s)	237, 1056
FokI	GGATG	6 cut(s)	656, 821, 1268, 1322, 1375, 1570
FriOI	GRGCYC	1 cut(s)	1002
FspBI	CTAG	2 cut(s)	1643, 1689
GsaI	CCCAGC	2 cut(s)	170, 1547
HaeII	RGCGCY	6 cut(s)	100, 468, 792, 948, 1032, 1517
HaeIII	GGCC	8 cut(s)	278, 327, 599, 795, 1121, 1159, 1430, 1522
Hin1I	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
Hin1II	CATG	5 cut(s)	162, 184, 298, 613, 724
HincII	GTYRAC	2 cut(s)	238, 730
HindII	GTYRAC	2 cut(s)	238, 730
HindIII	AAGCTT	1 cut(s)	140
HphI	GGTGA	4 cut(s)	397, 868, 1246, 1701
Hpy166II	GTNNAC	8 cut(s)	238, 369, 379, 388, 682, 730, 1006, 1057
Hpy188I	TCNGA	9 cut(s)	86, 259, 495, 1180, 1320, 1458, 1587, 1723, 1736
Hpy8I	GTNNAC	8 cut(s)	238, 369, 379, 388, 682, 730, 1006, 1057
Hpy99I	CGWCG	9 cut(s)	214, 413, 712, 857, 1037, 1393, 1594, 1640, 1667
HpyAV	CCTTC	5 cut(s)	197, 478, 1219, 1225, 1694
HpyCH4III	ACNGT	3 cut(s)	926, 1012, 1713
HpyCH4IV	ACGT	3 cut(s)	1388, 1589, 1662
HpyCH4V	TGCA	9 cut(s)	115, 162, 687, 786, 1281, 1330, 1372, 1494, 1581
HpyF3I	CTNAG	3 cut(s)	343, 1517, 1530
HpySE526I	ACGT	3 cut(s)	1388, 1589, 1662
Hsp92I	GRCGYC	8 cut(s)	209, 300, 465, 945, 1029, 1089, 1589, 1662
Hsp92II	CATG	5 cut(s)	162, 184, 298, 613, 724
KasI	GGCGCC	3 cut(s)	464, 944, 1028
Kpn2I	TCCGGA	1 cut(s)	1014
KroI	GCCGGC	2 cut(s)	791, 1289
KroNI	GCCGGC	2 cut(s)	793, 1291
Ksp22I	TGATCA	1 cut(s)	1206
Kzo9I	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
LmnI	GCTCC	5 cut(s)	175, 921, 1105, 1180, 1351
Lsp1109I	GCAGC	7 cut(s)	106, 699, 770, 798, 900, 1342, 1356
LweI	GCATC	3 cut(s)	882, 900, 1290
MabI	ACCWGGT	1 cut(s)	381
MaeI	CTAG	2 cut(s)	1643, 1689
MaeII	ACGT	3 cut(s)	1388, 1589, 1662
MaeIII	GTNAC	2 cut(s)	8, 1198
MalI	GATC	6 cut(s)	725, 953, 1208, 1455, 1460, 1649
MbiI	CCGCTC	1 cut(s)	1039
MboI	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
MflI	RGATCY	1 cut(s)	1458
MhlI	GDGCHC	2 cut(s)	1002, 1275
MluCI	AATT	2 cut(s)	1184, 1679
Mly113I	GGCGCC	3 cut(s)	465, 945, 1029
MlyI	GAGTC	7 cut(s)	59, 306, 473, 620, 657, 1556, 1609
MmeI	TCCRAC	1 cut(s)	987
MreI	CGCCGGCG	1 cut(s)	1289
MroI	TCCGGA	1 cut(s)	1014
MroNI	GCCGGC	2 cut(s)	791, 1289
MroXI	GAANNNNTTC	1 cut(s)	1217
MslI	CAYNNNNRTG	2 cut(s)	20, 179
MspA1I	CMGCKG	3 cut(s)	1063, 1162, 1333
MspR9I	CCNGG	7 cut(s)	275, 329, 383, 546, 985, 1154, 1360
Mva1269I	GAATGC	1 cut(s)	1581
MvaI	CCWGG	6 cut(s)	275, 329, 383, 546, 1154, 1360
MvnI	CGCG	8 cut(s)	950, 981, 1100, 1102, 1130, 1424, 1502, 1541
NaeI	GCCGGC	2 cut(s)	793, 1291
NarI	GGCGCC	3 cut(s)	465, 945, 1029
NciI	CCSGG	1 cut(s)	985
NcoI	CCATGG	1 cut(s)	609
NdeI	CATATG	1 cut(s)	1347
NdeII	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
NgoMIV	GCCGGC	2 cut(s)	791, 1289
NheI	GCTAGC	1 cut(s)	1642
NlaIII	CATG	5 cut(s)	162, 184, 298, 613, 724
NlaIV	GGNNCC	8 cut(s)	322, 466, 946, 1019, 1030, 1158, 1353, 1550
NmeAIII	GCCGAG	2 cut(s)	625, 750
NmuCI	GTSAC	1 cut(s)	1198
PasI	CCCWGGG	2 cut(s)	545, 1153
PcsI	WCGNNNNNNNCGW	3 cut(s)	621, 1008, 1635
PctI	GAATGC	1 cut(s)	1581
PdiI	GCCGGC	2 cut(s)	793, 1291
PdmI	GAANNNNTTC	1 cut(s)	1217
PfeI	GAWTC	3 cut(s)	87, 249, 1315
Pfl23II	CGTACG	1 cut(s)	1419
PfoI	TCCNGGA	1 cut(s)	1358
PinAI	ACCGGT	3 cut(s)	510, 1047, 1374
PleI	GAGTC	7 cut(s)	59, 306, 473, 620, 656, 1556, 1608
PluTI	GGCGCC	3 cut(s)	468, 948, 1032
PpsI	GAGTC	7 cut(s)	59, 306, 473, 620, 656, 1556, 1608
PpuMI	RGGWCCY	1 cut(s)	820
PshAI	GACNNNNGTC	1 cut(s)	1592
Psp124BI	GAGCTC	1 cut(s)	1002
Psp5II	RGGWCCY	1 cut(s)	820
Psp6I	CCWGG	6 cut(s)	273, 327, 381, 544, 1152, 1358
PspFI	CCCAGC	2 cut(s)	166, 1543
PspGI	CCWGG	6 cut(s)	273, 327, 381, 544, 1152, 1358
PspLI	CGTACG	1 cut(s)	1419
PspN4I	GGNNCC	8 cut(s)	322, 466, 946, 1019, 1030, 1158, 1353, 1550
PspPPI	RGGWCCY	1 cut(s)	820
PstI	CTGCAG	4 cut(s)	117, 689, 788, 1332
PstNI	CAGNNNCTG	1 cut(s)	1529
PsuI	RGATCY	1 cut(s)	1458
PvuII	CAGCTG	1 cut(s)	1333
RsaI	GTAC	7 cut(s)	222, 890, 995, 1167, 1244, 1409, 1421
RsaNI	GTAC	7 cut(s)	221, 889, 994, 1166, 1243, 1408, 1420
RseI	CAYNNNNRTG	2 cut(s)	20, 179
Rsr2I	CGGWCCG	2 cut(s)	513, 936
RsrII	CGGWCCG	2 cut(s)	513, 936
SacI	GAGCTC	1 cut(s)	1002
SalI	GTCGAC	1 cut(s)	236
Sau3AI	GATC	6 cut(s)	723, 951, 1206, 1453, 1458, 1647
SchI	GAGTC	7 cut(s)	59, 306, 473, 620, 657, 1556, 1609
ScrFI	CCNGG	7 cut(s)	275, 329, 383, 546, 985, 1154, 1360
SduI	GDGCHC	2 cut(s)	1002, 1275
SexAI	ACCWGGT	1 cut(s)	381
SfaNI	GCATC	3 cut(s)	882, 900, 1290
SfcI	CTRYAG	4 cut(s)	113, 685, 784, 1328
SfoI	GGCGCC	3 cut(s)	466, 946, 1030
SgrAI	CRCCGGYG	1 cut(s)	1289
SmiMI	CAYNNNNRTG	2 cut(s)	20, 179
SmlI	CTYRAG	2 cut(s)	128, 443
SmoI	CTYRAG	2 cut(s)	128, 443
Sse9I	AATT	2 cut(s)	1184, 1679
SspDI	GGCGCC	3 cut(s)	464, 944, 1028
SspMI	CTAG	2 cut(s)	1643, 1689
SstI	GAGCTC	1 cut(s)	1002
StyD4I	CCNGG	7 cut(s)	273, 327, 381, 544, 983, 1152, 1358
StyI	CCWWGG	3 cut(s)	609, 816, 1431
TaaI	ACNGT	3 cut(s)	926, 1012, 1713
TaiI	ACGT	3 cut(s)	1391, 1592, 1665
TaqII	GACCGA	1 cut(s)	1582
TasI	AATT	2 cut(s)	1184, 1679
TauI	GCSGC	4 cut(s)	305, 945, 950, 1162
TfiI	GAWTC	3 cut(s)	87, 249, 1315
TseFI	GTSAC	1 cut(s)	1198
TseI	GCWGC	7 cut(s)	94, 687, 783, 786, 913, 1330, 1369
Tsp45I	GTSAC	1 cut(s)	1198
TspGWI	ACGGA	3 cut(s)	109, 467, 1352
XagI	CCTNNNNNAGG	1 cut(s)	815
XapI	RAATTY	1 cut(s)	1679
XmiI	GTMKAC	2 cut(s)	237, 1056
XmnI	GAANNNNTTC	1 cut(s)	1217
XspI	CTAG	2 cut(s)	1643, 1689
ZraI	GACGTC	2 cut(s)	1590, 1663

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.