Basic Information

Type: gene

Biological Identity

Species

rosa_rugosa

Chromosome

GWHBQTZ00000001

Orthogroup ID

OG0015371

Physical Location & Seq

Genomic Coordinates Reverse (-)

39576352 .. 39579165

Gene Structure 2814 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rorug01G0282900.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1461 bp

ATGGTGATGGAGCAATATTATAATTTCCATCCCATCACCCTCCTCTTTGGCTTTGTTTCCTTTCTGGCAATCTCCCTCTTGGTGCTCTTCAACAGGCACAGATCCCAGTTCACAGGCAACAACCTCCCGCCGGGTAACGTCGGCTACCCGGTGATCGGAGAGAGCTACGAGTTCGTCTCTTCAGCCCGGAAAGGCCACCCCGAGAAGTTCATCTTAGACCGGGTGAACAAGCACTCCTCCCAAGTCTTCAAGACCTCTTTGATTGGGGAGAGAGCTGCCTTCTTCTGCGGCACCGCTTGCAACAAGTTCTTGTTCTCCAATGAGAAAAAGCTTGTCCAAGTCTGGTTATCGAGCTCTGTCAACAAGATCTTCCGTTCTTCCACCGAAACATCTGCCGCAGAGGACGCCAACAAGACGAGAAAGATGCTACACAACTTCTTGAAGCTCAACGCTCTGCAACGATACTTCGGAATCATTAACCAGTGTACCCAATCCCACTTTGCAGATAGCTGGGAAAACCAAAACGAAATTCATGCCCTAGAACTCGCCAAGAACTACACCTTCAAGCTTGCTGCACGCTTGTTTGTTAGCCTTGAAGATAAGGCGGACATTGAAAAACTAAGCAAACCATTCCGTGCAGTGAATGCCGGAACCATATCGCTGCCCATTGACTTCCCCGGAACTCTGTTTAGTAAAGCCATCAAGGCCGCCAACTTGATTAGGAAGGATTTGTACAAGATCATCAAGCAGAGGAAGGTCGACTTAGCAGAGGGAAATGCATCCCCCACACAAGACATGTTATCACACATGCTCTTGACCTGTGATGAAGATGGAACATATCTGAAGGAATCCGATATCGCCGATACGATTCTTGGTATGTTGGTTGCCGGCTTCGACACACTTAGTGCTGAATTGACTTTCATTGTGAAGTATCTTGGCGAGCTACCTCATATCTATGATGCAGTCTACAAAGAGCAAATGGAGATTGTAAATTCAAAAGCCCCAGGAGAGCCTTTGAAGTGGGAAGACCTTCAGAAGATGAAATACTCGTGGAATGTAGCTCAAGAAGTGCTGAGGATGGCACCACCTGTTCAAGGAAACTTCAGGGAAGCTTTAACCGATTTTGTCTTCAATGGTTTCACCATTCCGAAAGGGTGGAAGTTGTATTGGAGCGCAAACTTGACACACATGAGCGCCGATTGTTTCCCTGAACCGGAGAAATTCGACCCGTCAAGATTTGAAGGAAAGGGACCCGCACCTTACACATTTATTCCGTTCGGCGGAGGTCCGAGAATGTGTCCAGGAAATGAGTACGCTAGGGTGGTGACATTGGTGTTCATACACCACTTGGTGACAAGGTTCAGGTGGGAGAAGGTTTTCCCTGATGAGAAGACCACTGTTGCCCCTTTCCCTACCCCCGCCAAGGGACTTCCCATCCGCCTTCATCATCACCAAAAATGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004312 GO:0005575 GO:0005622 GO:0005623 GO:0005737 GO:0005783 GO:0005829 GO:0005840 GO:0006950 GO:0008150 GO:0008152 GO:0009058 GO:0009266 GO:0009314 GO:0009409 GO:0009416 GO:0009628 GO:0009922 GO:0010025 GO:0010166 GO:0012505 GO:0016020 GO:0016740 GO:0016746 GO:0016747 GO:0022626 GO:0032991 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044424 GO:0044444 GO:0044445 GO:0044464 GO:0050896 GO:0071704 GO:1901568 GO:1901570 GO:1901576 GO:1990904

KEGG Pathways

Metabolic & Signaling

ko00062 ko01110 map00062 map01110

Pfam Domains

Protein Families

ACP_syn_III_C FAE1_CUT1_RppA

Protein Analysis

486

Amino Acids

55.22

Weight (kDa)

8.86

Isoelectric Point (pI)

36.7

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
p450	PF00067	43 - 458	1.5e-53	Cytochrome P450

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0015371)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G01120
fragaria_vesca	FvH4_7g17440
malus_domestica	MD01G1087400.v1.1 MD07G1157600.v1.1
prunus_persica	Prupe.2G196000_v2.0.a1
pyrus_communis	pycom01g11140 pycom07g15410
rosa_chinensis	RchiOBHm_Chr1g0360891
rosa_laevigata	RLG00000027773 RLG00000027775
rosa_multiflora	Rmu_sc0000677.1_g000044
rosa_rugosa	Rorug01G0282900
rosa_samantha	Rh1AG294400 Rh1BG259400 Rh1DG289400
rosa_wichuraiana	Rw1G026040

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	21
AccB1I	GGYRCC	2 cut(s)	290, 1081
AccI	GTMKAC	2 cut(s)	759, 966
AclWI	GGATC	1 cut(s)	96
AcsI	RAATTY	3 cut(s)	528, 991, 1220
AcuI	CTGAAG	4 cut(s)	165, 863, 1016, 1087
AcyI	GRCGYC	1 cut(s)	405
AdeI	CACNNNGTG	2 cut(s)	905, 1351
AfaI	GTAC	3 cut(s)	487, 734, 1313
AfiI	CCNNNNNNNGG	7 cut(s)	130, 155, 1094, 1213, 1280, 1423, 1424
AflIII	ACRYGT	1 cut(s)	795
AjnI	CCWGG	2 cut(s)	1003, 1300
AjuI	GAANNNNNNNTTGG	2 cut(s)	513, 545
AloI	GAACNNNNNNTCC	2 cut(s)	218, 250
Alw21I	GWGCWC	2 cut(s)	87, 356
Alw26I	GTCTC	1 cut(s)	181
AlwI	GGATC	1 cut(s)	96
Ama87I	CYCGRG	1 cut(s)	200
AoxI	GGCC	2 cut(s)	193, 705
ApeKI	GCWGC	3 cut(s)	275, 572, 661
ApoI	RAATTY	3 cut(s)	528, 991, 1220
Asp700I	GAANNNNTTC	2 cut(s)	1029, 1376
AspLEI	GCGC	2 cut(s)	1175, 1196
AspS9I	GGNCC	2 cut(s)	1250, 1286
AsuC2I	CCSGG	5 cut(s)	132, 149, 187, 221, 678
AsuHPI	GGTGA	8 cut(s)	16, 28, 163, 235, 1132, 1336, 1363, 1442
AvaI	CYCGRG	1 cut(s)	200
AvaII	GGWCC	2 cut(s)	1250, 1286
BaeI	ACNNNNGTAYC	2 cut(s)	469, 502
BanI	GGYRCC	2 cut(s)	290, 1081
BanII	GRGCYC	1 cut(s)	356
BarI	GAAGNNNNNNTAC	4 cut(s)	716, 748, 1028, 1060
BauI	CACGAG	1 cut(s)	1048
BbsI	GAAGAC	4 cut(s)	238, 1032, 1120, 1397
Bbv12I	GWGCWC	2 cut(s)	87, 356
BbvCI	CCTCAGC	1 cut(s)	1073
BbvI	GCAGC	3 cut(s)	262, 559, 648
BccI	CCATC	6 cut(s)	36, 41, 707, 824, 1072, 1442
BcgI	CGANNNNNNTGC	6 cut(s)	374, 406, 408, 440, 515, 549
BciT130I	CCWGG	2 cut(s)	1005, 1302
BcnI	CCSGG	5 cut(s)	132, 149, 187, 221, 678
BcoDI	GTCTC	1 cut(s)	181
BfaI	CTAG	2 cut(s)	539, 1317
BfoI	RGCGCY	1 cut(s)	1197
BglI	GCCNNNNNGGC	1 cut(s)	704
BglII	AGATCT	1 cut(s)	366
BisI	GCNGC	6 cut(s)	276, 289, 396, 573, 662, 708
BlsI	GCNGC	6 cut(s)	277, 290, 397, 574, 663, 709
Bme1390I	CCNGG	7 cut(s)	132, 149, 187, 221, 678, 1005, 1302
Bme18I	GGWCC	2 cut(s)	1250, 1286
BmeT110I	CYCGRG	1 cut(s)	200
BmgT120I	GGNCC	2 cut(s)	1250, 1286
BmiI	GGNNCC	5 cut(s)	292, 652, 1083, 1251, 1252
BmrFI	CCNGG	7 cut(s)	132, 149, 187, 221, 678, 1005, 1302
BmrI	ACTGGG	1 cut(s)	100
BmsI	GCATC	3 cut(s)	414, 788, 949
BmuI	ACTGGG	1 cut(s)	100
BpiI	GAAGAC	4 cut(s)	238, 1032, 1120, 1397
BplI	GAGNNNNNCTC	2 cut(s)	161, 193
Bpu10I	CCTNAGC	1 cut(s)	1073
BpuEI	CTTGAG	1 cut(s)	1047
BpuMI	CCSGG	5 cut(s)	132, 149, 187, 221, 678
BsaHI	GRCGYC	1 cut(s)	405
BsaJI	CCNNGG	3 cut(s)	676, 1003, 1422
BsaWI	WCCGGW	1 cut(s)	1213
BsaXI	ACNNNNNCTCC	2 cut(s)	218, 248
Bsc4I	CCNNNNNNNGG	7 cut(s)	130, 155, 1094, 1213, 1280, 1423, 1424
Bse118I	RCCGGY	1 cut(s)	887
Bse1I	ACTGG	2 cut(s)	106, 481
BseBI	CCWGG	2 cut(s)	1005, 1302
BseDI	CCNNGG	3 cut(s)	676, 1003, 1422
BseGI	GGATG	4 cut(s)	28, 779, 1083, 1434
BseLI	CCNNNNNNNGG	7 cut(s)	130, 155, 1094, 1213, 1280, 1423, 1424
BseMII	CTCAG	1 cut(s)	1064
BseNI	ACTGG	2 cut(s)	106, 481
BseRI	GAGGAG	2 cut(s)	32, 226
BseXI	GCAGC	3 cut(s)	262, 559, 648
BseYI	CCCAGC	1 cut(s)	510
BsgI	GTGCAG	2 cut(s)	558, 657
BshFI	GGCC	2 cut(s)	195, 707
BshNI	GGYRCC	2 cut(s)	290, 1081
BsiHKAI	GWGCWC	2 cut(s)	87, 356
BsiHKCI	CYCGRG	1 cut(s)	200
BsiSI	CCGG	8 cut(s)	131, 149, 187, 220, 648, 678, 888, 1214
BslFI	GGGAC	2 cut(s)	1263, 1440
BslI	CCNNNNNNNGG	7 cut(s)	130, 155, 1094, 1213, 1280, 1423, 1424
BsmAI	GTCTC	1 cut(s)	181
BsmBI	CGTCTC	1 cut(s)	181
BsmFI	GGGAC	2 cut(s)	1263, 1440
BsmI	GAATGC	1 cut(s)	649
BsnI	GGCC	2 cut(s)	195, 707
BsoBI	CYCGRG	1 cut(s)	200
Bsp1286I	GDGCHC	2 cut(s)	87, 356
Bsp1407I	TGTACA	1 cut(s)	732
Bsp143I	GATC	4 cut(s)	101, 153, 366, 738
BspANI	GGCC	2 cut(s)	195, 707
BspCNI	CTCAG	1 cut(s)	1065
BspLI	GGNNCC	5 cut(s)	292, 652, 1083, 1251, 1252
BspPI	GGATC	1 cut(s)	96
BspQI	GCTCTTC	1 cut(s)	92
BspT107I	GGYRCC	2 cut(s)	290, 1081
BsrFI	RCCGGY	1 cut(s)	887
BsrGI	TGTACA	1 cut(s)	732
BsrI	ACTGG	2 cut(s)	106, 481
BssAI	RCCGGY	1 cut(s)	887
BssECI	CCNNGG	3 cut(s)	676, 1003, 1422
BssMI	GATC	4 cut(s)	101, 153, 366, 738
BssNI	GRCGYC	1 cut(s)	405
BssSI	CACGAG	1 cut(s)	1048
BssT1I	CCWWGG	1 cut(s)	1422
Bst2BI	CACGAG	1 cut(s)	1048
Bst2UI	CCWGG	2 cut(s)	1005, 1302
Bst4CI	ACNGT	1 cut(s)	1399
Bst6I	CTCTTC	2 cut(s)	92, 184
BstACI	GRCGYC	1 cut(s)	405
BstAPI	GCANNNNNTGC	2 cut(s)	297, 644
BstAUI	TGTACA	1 cut(s)	732
BstC8I	GCNNGC	5 cut(s)	298, 570, 577, 889, 941
BstDEI	CTNAG	5 cut(s)	214, 620, 763, 902, 1073
BstENI	CCTNNNNNAGG	1 cut(s)	1092
BstF5I	GGATG	4 cut(s)	28, 779, 1083, 1434
BstH2I	RGCGCY	1 cut(s)	1197
BstHHI	GCGC	2 cut(s)	1175, 1196
BstKTI	GATC	4 cut(s)	104, 156, 369, 741
BstMAI	GTCTC	1 cut(s)	181
BstMBI	GATC	4 cut(s)	101, 153, 366, 738
BstMWI	GCNNNNNNNGC	4 cut(s)	297, 404, 644, 704
BstNI	CCWGG	2 cut(s)	1005, 1302
BstNSI	RCATGY	2 cut(s)	799, 811
BstSCI	CCNGG	7 cut(s)	130, 147, 185, 219, 676, 1003, 1300
BstV1I	GCAGC	3 cut(s)	262, 559, 648
BstV2I	GAAGAC	4 cut(s)	238, 1032, 1120, 1397
BstX2I	RGATCY	2 cut(s)	101, 366
BstYI	RGATCY	2 cut(s)	101, 366
BsuRI	GGCC	2 cut(s)	195, 707
BtsCI	GGATG	4 cut(s)	28, 779, 1083, 1434
BtsI	GCAGTG	1 cut(s)	645
BtsIMutI	CAGTG	3 cut(s)	488, 645, 1395
Cac8I	GCNNGC	5 cut(s)	298, 570, 577, 889, 941
CfoI	GCGC	2 cut(s)	1175, 1196
Cfr10I	RCCGGY	1 cut(s)	887
Cfr13I	GGNCC	2 cut(s)	1250, 1286
CseI	GACGC	1 cut(s)	413
Csp6I	GTAC	3 cut(s)	486, 733, 1312
CviAII	CATG	4 cut(s)	533, 796, 808, 1189
CviQI	GTAC	3 cut(s)	486, 733, 1312
DdeI	CTNAG	5 cut(s)	214, 620, 763, 902, 1073
DpnI	GATC	4 cut(s)	103, 155, 368, 740
DpnII	GATC	4 cut(s)	101, 153, 366, 738
DraIII	CACNNNGTG	2 cut(s)	905, 1351
Eam1104I	CTCTTC	2 cut(s)	92, 184
EarI	CTCTTC	2 cut(s)	92, 184
EciI	GGCGGA	3 cut(s)	620, 1296, 1427
Ecl136II	GAGCTC	1 cut(s)	354
Eco130I	CCWWGG	1 cut(s)	1422
Eco24I	GRGCYC	1 cut(s)	356
Eco32I	GATATC	1 cut(s)	856
Eco47I	GGWCC	2 cut(s)	1250, 1286
Eco53kI	GAGCTC	1 cut(s)	354
Eco57I	CTGAAG	4 cut(s)	165, 863, 1016, 1087
Eco88I	CYCGRG	1 cut(s)	200
EcoICRI	GAGCTC	1 cut(s)	354
EcoNI	CCTNNNNNAGG	1 cut(s)	1092
EcoO109I	RGGNCCY	1 cut(s)	1250
EcoRII	CCWGG	2 cut(s)	1003, 1300
EcoRV	GATATC	1 cut(s)	856
EcoT14I	CCWWGG	1 cut(s)	1422
EcoT22I	ATGCAT	1 cut(s)	781
EcoT38I	GRGCYC	1 cut(s)	356
ErhI	CCWWGG	1 cut(s)	1422
Esp3I	CGTCTC	1 cut(s)	181
FaeI	CATG	4 cut(s)	536, 799, 811, 1192
FalI	AAGNNNNNCTT	4 cut(s)	197, 229, 746, 778
FaqI	GGGAC	2 cut(s)	1263, 1440
FatI	CATG	4 cut(s)	532, 795, 807, 1188
FauI	CCCGC	3 cut(s)	135, 1261, 1426
FblI	GTMKAC	2 cut(s)	759, 966
Fnu4HI	GCNGC	6 cut(s)	276, 289, 396, 573, 662, 708
FokI	GGATG	4 cut(s)	15, 766, 1090, 1421
FriOI	GRGCYC	1 cut(s)	356
Fsp4HI	GCNGC	6 cut(s)	276, 289, 396, 573, 662, 708
FspBI	CTAG	2 cut(s)	539, 1317
GlaI	GCGC	2 cut(s)	1174, 1195
GluI	GCNGC	6 cut(s)	276, 289, 396, 573, 662, 708
GsaI	CCCAGC	1 cut(s)	514
HaeII	RGCGCY	1 cut(s)	1197
HaeIII	GGCC	2 cut(s)	195, 707
HapII	CCGG	8 cut(s)	131, 149, 187, 220, 648, 678, 888, 1214
HgaI	GACGC	1 cut(s)	413
HhaI	GCGC	2 cut(s)	1175, 1196
Hin1I	GRCGYC	1 cut(s)	405
Hin1II	CATG	4 cut(s)	536, 799, 811, 1192
Hin6I	GCGC	2 cut(s)	1173, 1194
HinP1I	GCGC	2 cut(s)	1173, 1194
HincII	GTYRAC	2 cut(s)	361, 760
HindII	GTYRAC	2 cut(s)	361, 760
HindIII	AAGCTT	3 cut(s)	329, 566, 1110
HinfI	GANTC	3 cut(s)	471, 848, 868
HpaII	CCGG	8 cut(s)	131, 149, 187, 220, 648, 678, 888, 1214
HphI	GGTGA	8 cut(s)	16, 28, 163, 235, 1132, 1336, 1363, 1442
Hpy166II	GTNNAC	6 cut(s)	111, 226, 361, 486, 760, 967
Hpy188I	TCNGA	7 cut(s)	158, 470, 843, 853, 1035, 1149, 1290
Hpy188III	TCNNGA	5 cut(s)	250, 439, 814, 1064, 1233
Hpy8I	GTNNAC	6 cut(s)	111, 226, 361, 486, 760, 967
Hpy99I	CGWCG	1 cut(s)	143
HpyAV	CCTTC	9 cut(s)	289, 571, 718, 748, 838, 1040, 1235, 1366, 1451
HpyCH4III	ACNGT	1 cut(s)	1399
HpyCH4IV	ACGT	1 cut(s)	138
HpyCH4V	TGCA	7 cut(s)	300, 457, 503, 575, 638, 779, 962
HpyF10VI	GCNNNNNNNGC	4 cut(s)	297, 404, 644, 704
HpyF3I	CTNAG	5 cut(s)	214, 620, 763, 902, 1073
HpySE526I	ACGT	1 cut(s)	138
Hsp92I	GRCGYC	1 cut(s)	405
Hsp92II	CATG	4 cut(s)	536, 799, 811, 1192
HspAI	GCGC	2 cut(s)	1173, 1194
KflI	GGGWCCC	1 cut(s)	1250
KroI	GCCGGC	1 cut(s)	887
KroNI	GCCGGC	1 cut(s)	889
Kzo9I	GATC	4 cut(s)	101, 153, 366, 738
LguI	GCTCTTC	1 cut(s)	92
LmnI	GCTCC	2 cut(s)	10, 1170
Lsp1109I	GCAGC	3 cut(s)	262, 559, 648
LweI	GCATC	3 cut(s)	414, 788, 949
MaeI	CTAG	2 cut(s)	539, 1317
MaeII	ACGT	1 cut(s)	138
MaeIII	GTNAC	3 cut(s)	134, 1324, 1351
MalI	GATC	4 cut(s)	103, 155, 368, 740
MboI	GATC	4 cut(s)	101, 153, 366, 738
MflI	RGATCY	2 cut(s)	101, 366
MhlI	GDGCHC	2 cut(s)	87, 356
MluCI	AATT	5 cut(s)	22, 528, 911, 991, 1220
Mph1103I	ATGCAT	1 cut(s)	781
MroNI	GCCGGC	1 cut(s)	887
MroXI	GAANNNNTTC	2 cut(s)	1029, 1376
MseI	TTAA	2 cut(s)	477, 1115
MslI	CAYNNNNRTG	1 cut(s)	954
MspI	CCGG	8 cut(s)	131, 149, 187, 220, 648, 678, 888, 1214
MspR9I	CCNGG	7 cut(s)	132, 149, 187, 221, 678, 1005, 1302
Mva1269I	GAATGC	1 cut(s)	649
MvaI	CCWGG	2 cut(s)	1005, 1302
MwoI	GCNNNNNNNGC	4 cut(s)	297, 404, 644, 704
NaeI	GCCGGC	1 cut(s)	889
NciI	CCSGG	5 cut(s)	132, 149, 187, 221, 678
NdeII	GATC	4 cut(s)	101, 153, 366, 738
NgoMIV	GCCGGC	1 cut(s)	887
NlaIII	CATG	4 cut(s)	536, 799, 811, 1192
NlaIV	GGNNCC	5 cut(s)	292, 652, 1083, 1251, 1252
NmuCI	GTSAC	2 cut(s)	1324, 1351
NsiI	ATGCAT	1 cut(s)	781
NspI	RCATGY	2 cut(s)	799, 811
PciI	ACATGT	1 cut(s)	795
PciSI	GCTCTTC	1 cut(s)	92
PctI	GAATGC	1 cut(s)	649
PdiI	GCCGGC	1 cut(s)	889
PdmI	GAANNNNTTC	2 cut(s)	1029, 1376
PfeI	GAWTC	3 cut(s)	471, 848, 868
PfoI	TCCNGGA	1 cut(s)	1300
PkrI	GCNGC	6 cut(s)	277, 290, 397, 574, 663, 709
PpuMI	RGGWCCY	1 cut(s)	1250
PscI	ACATGT	1 cut(s)	795
PsiI	TTATAA	1 cut(s)	21
Psp124BI	GAGCTC	1 cut(s)	356
Psp5II	RGGWCCY	1 cut(s)	1250
Psp6I	CCWGG	2 cut(s)	1003, 1300
PspFI	CCCAGC	1 cut(s)	510
PspGI	CCWGG	2 cut(s)	1003, 1300
PspN4I	GGNNCC	5 cut(s)	292, 652, 1083, 1251, 1252
PspPI	GGNCC	2 cut(s)	1250, 1286
PspPPI	RGGWCCY	1 cut(s)	1250
PsuI	RGATCY	2 cut(s)	101, 366
RsaI	GTAC	3 cut(s)	487, 734, 1313
RsaNI	GTAC	3 cut(s)	486, 733, 1312
RseI	CAYNNNNRTG	1 cut(s)	954
SacI	GAGCTC	1 cut(s)	356
SalI	GTCGAC	1 cut(s)	758
SapI	GCTCTTC	1 cut(s)	92
SaqAI	TTAA	2 cut(s)	477, 1115
SatI	GCNGC	6 cut(s)	276, 289, 396, 573, 662, 708
Sau3AI	GATC	4 cut(s)	101, 153, 366, 738
Sau96I	GGNCC	2 cut(s)	1250, 1286
ScrFI	CCNGG	7 cut(s)	132, 149, 187, 221, 678, 1005, 1302
SduI	GDGCHC	2 cut(s)	87, 356
SfaNI	GCATC	3 cut(s)	414, 788, 949
SinI	GGWCC	2 cut(s)	1250, 1286
SmiMI	CAYNNNNRTG	1 cut(s)	954
SmlI	CTYRAG	1 cut(s)	1062
SmoI	CTYRAG	1 cut(s)	1062
Sse9I	AATT	5 cut(s)	22, 528, 911, 991, 1220
SspI	AATATT	1 cut(s)	17
SspMI	CTAG	2 cut(s)	539, 1317
SstI	GAGCTC	1 cut(s)	356
StyD4I	CCNGG	7 cut(s)	130, 147, 185, 219, 676, 1003, 1300
StyI	CCWWGG	1 cut(s)	1422
TaaI	ACNGT	1 cut(s)	1399
TaiI	ACGT	1 cut(s)	141
TaqI	TCGA	4 cut(s)	350, 759, 894, 1224
TasI	AATT	5 cut(s)	22, 528, 911, 991, 1220
TatI	WGTACW	1 cut(s)	732
TauI	GCSGC	3 cut(s)	291, 398, 710
TfiI	GAWTC	3 cut(s)	471, 848, 868
Tru1I	TTAA	2 cut(s)	477, 1115
Tru9I	TTAA	2 cut(s)	477, 1115
TscAI	CASTG	3 cut(s)	488, 645, 1402
TseFI	GTSAC	2 cut(s)	1324, 1351
TseI	GCWGC	3 cut(s)	275, 572, 661
Tsp45I	GTSAC	2 cut(s)	1324, 1351
TspDTI	ATGAA	7 cut(s)	199, 521, 840, 910, 1055, 1327, 1433
TspGWI	ACGGA	3 cut(s)	362, 623, 1263
TspRI	CASTG	3 cut(s)	488, 645, 1402
VpaK11BI	GGWCC	2 cut(s)	1250, 1286
XagI	CCTNNNNNAGG	1 cut(s)	1092
XapI	RAATTY	3 cut(s)	528, 991, 1220
XceI	RCATGY	2 cut(s)	799, 811
XmiI	GTMKAC	2 cut(s)	759, 966
XmnI	GAANNNNTTC	2 cut(s)	1029, 1376
XspI	CTAG	2 cut(s)	539, 1317
Zsp2I	ATGCAT	1 cut(s)	781

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.