Tripeptidyl-peptidase 2-like
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT4G20850 |
| fragaria_vesca | FvH4_7g29630 FvH4_7g29630 FvH4_7g29630 |
| malus_domestica | MD01G1203100.v1.1 MD07G1272600.v1.1 |
| prunus_persica | Prupe.2G295900_v2.0.a1 Prupe.2G295900_v2.0.a1 |
| pyrus_communis | pycom01g21240 pycom07g24900 |
| rosa_chinensis | RchiOBHm_Chr1g0377641 |
| rosa_laevigata | RLG00000026509 |
| rosa_multiflora | Rmu_sc0002832.1_g000013 |
| rosa_roxburghii | Rroxscaffold_4G00281150 |
| rosa_rugosa | Rorug01G0403900 |
| rosa_samantha | Rh1AG428700 Rh1BG380700 Rh1CG394700 Rh1DG411700 |
| rosa_wichuraiana | Rw1G037000 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc16I | TGCGCA | 1 cut(s) | 375 |
| Acc36I | ACCTGC | 1 cut(s) | 819 |
| Acc65I | GGTACC | 1 cut(s) | 1433 |
| AccB1I | GGYRCC | 3 cut(s) | 353, 398, 1433 |
| AccB7I | CCANNNNNTGG | 2 cut(s) | 953, 1322 |
| AccBSI | CCGCTC | 1 cut(s) | 3421 |
| AccI | GTMKAC | 1 cut(s) | 2266 |
| AccII | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| AclI | AACGTT | 1 cut(s) | 3970 |
| AclWI | GGATC | 6 cut(s) | 425, 438, 2135, 2148, 3253, 3695 |
| AcoI | YGGCCR | 3 cut(s) | 391, 2738, 3675 |
| AcsI | RAATTY | 6 cut(s) | 1932, 1997, 2727, 2900, 3079, 3680 |
| AcyI | GRCGYC | 2 cut(s) | 354, 399 |
| AdeI | CACNNNGTG | 1 cut(s) | 1430 |
| AflII | CTTAAG | 2 cut(s) | 1939, 3524 |
| AgeI | ACCGGT | 1 cut(s) | 2701 |
| AjnI | CCWGG | 7 cut(s) | 1168, 1426, 1513, 1591, 2305, 3175, 3871 |
| AjuI | GAANNNNNNNTTGG | 4 cut(s) | 2325, 2357, 4031, 4063 |
| Alw21I | GWGCWC | 7 cut(s) | 802, 1177, 1415, 1426, 1495, 1570, 1591 |
| Alw26I | GTCTC | 7 cut(s) | 1194, 1217, 1474, 2684, 2913, 3660, 3737 |
| AlwI | GGATC | 6 cut(s) | 425, 438, 2135, 2148, 3253, 3695 |
| Ama87I | CYCGRG | 2 cut(s) | 1242, 2287 |
| ApoI | RAATTY | 6 cut(s) | 1932, 1997, 2727, 2900, 3079, 3680 |
| ArsI | GACNNNNNNTTYG | 4 cut(s) | 855, 887, 2885, 2917 |
| AseI | ATTAAT | 1 cut(s) | 2616 |
| AsiGI | ACCGGT | 1 cut(s) | 2701 |
| Asp700I | GAANNNNTTC | 2 cut(s) | 3435, 4046 |
| Asp718I | GGTACC | 1 cut(s) | 1433 |
| AspLEI | GCGC | 4 cut(s) | 356, 376, 401, 2211 |
| AspS9I | GGNCC | 8 cut(s) | 808, 866, 1400, 1550, 2213, 2651, 3131, 3203 |
| AsuC2I | CCSGG | 2 cut(s) | 502, 1862 |
| AsuHPI | GGTGA | 5 cut(s) | 235, 521, 626, 1529, 2969 |
| AsuII | TTCGAA | 2 cut(s) | 17, 524 |
| AvaI | CYCGRG | 2 cut(s) | 1242, 2287 |
| AvaII | GGWCC | 2 cut(s) | 808, 3203 |
| AxyI | CCTNAGG | 1 cut(s) | 1850 |
| BaeGI | GKGCMC | 1 cut(s) | 978 |
| BalI | TGGCCA | 1 cut(s) | 3677 |
| BamHI | GGATCC | 2 cut(s) | 430, 2140 |
| BanI | GGYRCC | 3 cut(s) | 353, 398, 1433 |
| BanII | GRGCYC | 4 cut(s) | 802, 1249, 1570, 2089 |
| BarI | GAAGNNNNNNTAC | 2 cut(s) | 4034, 4066 |
| BauI | CACGAG | 3 cut(s) | 1926, 3750, 4106 |
| BbsI | GAAGAC | 5 cut(s) | 154, 169, 2847, 3153, 3510 |
| Bbv12I | GWGCWC | 7 cut(s) | 802, 1177, 1415, 1426, 1495, 1570, 1591 |
| BbvCI | CCTCAGC | 1 cut(s) | 1716 |
| BceAI | ACGGC | 2 cut(s) | 406, 1530 |
| BciT130I | CCWGG | 7 cut(s) | 1170, 1428, 1515, 1593, 2307, 3177, 3873 |
| BclI | TGATCA | 2 cut(s) | 757, 1281 |
| BcnI | CCSGG | 2 cut(s) | 502, 1862 |
| BcoDI | GTCTC | 7 cut(s) | 1194, 1217, 1474, 2684, 2913, 3660, 3737 |
| BfaI | CTAG | 5 cut(s) | 482, 1542, 1950, 2013, 2550 |
| BfmI | CTRYAG | 3 cut(s) | 190, 1776, 2250 |
| BfoI | RGCGCY | 2 cut(s) | 357, 402 |
| BfrI | CTTAAG | 2 cut(s) | 1939, 3524 |
| BfuAI | ACCTGC | 1 cut(s) | 819 |
| BglII | AGATCT | 2 cut(s) | 3564, 3859 |
| BmcAI | AGTACT | 1 cut(s) | 3957 |
| Bme1390I | CCNGG | 9 cut(s) | 502, 1170, 1428, 1515, 1593, 1862, 2307, 3177, 3873 |
| Bme18I | GGWCC | 2 cut(s) | 808, 3203 |
| BmeT110I | CYCGRG | 2 cut(s) | 1242, 2287 |
| BmgT120I | GGNCC | 8 cut(s) | 808, 866, 1400, 1550, 2213, 2651, 3131, 3203 |
| BmrFI | CCNGG | 9 cut(s) | 502, 1170, 1428, 1515, 1593, 1862, 2307, 3177, 3873 |
| BmrI | ACTGGG | 1 cut(s) | 1242 |
| BmsI | GCATC | 9 cut(s) | 361, 385, 584, 868, 1018, 2920, 3433, 3622, 4110 |
| BmuI | ACTGGG | 1 cut(s) | 1242 |
| BpiI | GAAGAC | 5 cut(s) | 154, 169, 2847, 3153, 3510 |
| BpmI | CTGGAG | 3 cut(s) | 444, 1191, 1497 |
| Bpu10I | CCTNAGC | 1 cut(s) | 1716 |
| Bpu14I | TTCGAA | 2 cut(s) | 17, 524 |
| BpuEI | CTTGAG | 4 cut(s) | 956, 1547, 1778, 2847 |
| BpuMI | CCSGG | 2 cut(s) | 502, 1862 |
| Bsa29I | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| BsaAI | YACGTR | 1 cut(s) | 3962 |
| BsaBI | GATNNNNATC | 2 cut(s) | 375, 1092 |
| BsaHI | GRCGYC | 2 cut(s) | 354, 399 |
| BsaJI | CCNNGG | 7 cut(s) | 394, 729, 1546, 2204, 2988, 3175, 3176 |
| BsaWI | WCCGGW | 3 cut(s) | 611, 2701, 3102 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 2838, 2868 |
| Bse118I | RCCGGY | 3 cut(s) | 2701, 2736, 2740 |
| Bse1I | ACTGG | 8 cut(s) | 1231, 1237, 1557, 1813, 2064, 2685, 3792, 3798 |
| Bse21I | CCTNAGG | 1 cut(s) | 1850 |
| Bse3DI | GCAATG | 6 cut(s) | 1485, 1691, 1713, 2958, 3598, 4121 |
| Bse8I | GATNNNNATC | 2 cut(s) | 375, 1092 |
| BseBI | CCWGG | 7 cut(s) | 1170, 1428, 1515, 1593, 2307, 3177, 3873 |
| BseCI | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| BseDI | CCNNGG | 7 cut(s) | 394, 729, 1546, 2204, 2988, 3175, 3176 |
| BseGI | GGATG | 9 cut(s) | 376, 709, 946, 1093, 1870, 2298, 3100, 3209, 4125 |
| BseJI | GATNNNNATC | 2 cut(s) | 375, 1092 |
| BseMI | GCAATG | 6 cut(s) | 1485, 1691, 1713, 2958, 3598, 4121 |
| BseMII | CTCAG | 8 cut(s) | 158, 1707, 2679, 2805, 3408, 3474, 3891, 3966 |
| BseNI | ACTGG | 8 cut(s) | 1231, 1237, 1557, 1813, 2064, 2685, 3792, 3798 |
| BseSI | GKGCMC | 1 cut(s) | 978 |
| BseX3I | CGGCCG | 2 cut(s) | 391, 2738 |
| BseYI | CCCAGC | 1 cut(s) | 27 |
| BsgI | GTGCAG | 3 cut(s) | 1617, 2150, 3855 |
| Bsh1236I | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| Bsh1285I | CGRYCG | 3 cut(s) | 361, 394, 2741 |
| BshNI | GGYRCC | 3 cut(s) | 353, 398, 1433 |
| BshTI | ACCGGT | 1 cut(s) | 2701 |
| BshVI | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| BsiEI | CGRYCG | 3 cut(s) | 361, 394, 2741 |
| BsiHKAI | GWGCWC | 7 cut(s) | 802, 1177, 1415, 1426, 1495, 1570, 1591 |
| BsiHKCI | CYCGRG | 2 cut(s) | 1242, 2287 |
| BsiSI | CCGG | 7 cut(s) | 501, 612, 1861, 2702, 2737, 2741, 3103 |
| BsiWI | CGTACG | 1 cut(s) | 3270 |
| BslFI | GGGAC | 3 cut(s) | 287, 2412, 3158 |
| BsmAI | GTCTC | 7 cut(s) | 1194, 1217, 1474, 2684, 2913, 3660, 3737 |
| BsmBI | CGTCTC | 1 cut(s) | 3660 |
| BsmFI | GGGAC | 3 cut(s) | 287, 2412, 3158 |
| BsmI | GAATGC | 1 cut(s) | 3191 |
| BsoBI | CYCGRG | 2 cut(s) | 1242, 2287 |
| Bsp119I | TTCGAA | 2 cut(s) | 17, 524 |
| Bsp1407I | TGTACA | 1 cut(s) | 1034 |
| Bsp19I | CCATGG | 1 cut(s) | 2204 |
| Bsp68I | TCGCGA | 2 cut(s) | 82, 804 |
| BspCNI | CTCAG | 8 cut(s) | 159, 1708, 2680, 2804, 3409, 3475, 3890, 3965 |
| BspDI | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| BspFNI | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| BspHI | TCATGA | 2 cut(s) | 1644, 2002 |
| BspMI | ACCTGC | 1 cut(s) | 819 |
| BspPI | GGATC | 6 cut(s) | 425, 438, 2135, 2148, 3253, 3695 |
| BspT104I | TTCGAA | 2 cut(s) | 17, 524 |
| BspT107I | GGYRCC | 3 cut(s) | 353, 398, 1433 |
| BspTI | CTTAAG | 2 cut(s) | 1939, 3524 |
| BsrBI | CCGCTC | 1 cut(s) | 3421 |
| BsrDI | GCAATG | 6 cut(s) | 1485, 1691, 1713, 2958, 3598, 4121 |
| BsrFI | RCCGGY | 3 cut(s) | 2701, 2736, 2740 |
| BsrGI | TGTACA | 1 cut(s) | 1034 |
| BsrI | ACTGG | 8 cut(s) | 1231, 1237, 1557, 1813, 2064, 2685, 3792, 3798 |
| BssAI | RCCGGY | 3 cut(s) | 2701, 2736, 2740 |
| BssECI | CCNNGG | 7 cut(s) | 394, 729, 1546, 2204, 2988, 3175, 3176 |
| BssNI | GRCGYC | 2 cut(s) | 354, 399 |
| BssSI | CACGAG | 3 cut(s) | 1926, 3750, 4106 |
| BssT1I | CCWWGG | 3 cut(s) | 729, 2204, 2988 |
| Bst2BI | CACGAG | 3 cut(s) | 1926, 3750, 4106 |
| Bst2UI | CCWGG | 7 cut(s) | 1170, 1428, 1515, 1593, 2307, 3177, 3873 |
| Bst4CI | ACNGT | 8 cut(s) | 278, 1417, 1742, 1981, 2181, 2277, 3149, 3555 |
| Bst6I | CTCTTC | 6 cut(s) | 598, 1632, 2037, 3081, 3426, 3708 |
| BstACI | GRCGYC | 2 cut(s) | 354, 399 |
| BstAFI | CTTAAG | 2 cut(s) | 1939, 3524 |
| BstAPI | GCANNNNNTGC | 5 cut(s) | 207, 1484, 1604, 2705, 4120 |
| BstAUI | TGTACA | 1 cut(s) | 1034 |
| BstBAI | YACGTR | 1 cut(s) | 3962 |
| BstBI | TTCGAA | 2 cut(s) | 17, 524 |
| BstDSI | CCRYGG | 3 cut(s) | 394, 1546, 2204 |
| BstF5I | GGATG | 9 cut(s) | 376, 709, 946, 1093, 1870, 2298, 3100, 3209, 4125 |
| BstFNI | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| BstH2I | RGCGCY | 2 cut(s) | 357, 402 |
| BstHHI | GCGC | 4 cut(s) | 356, 376, 401, 2211 |
| BstMAI | GTCTC | 7 cut(s) | 1194, 1217, 1474, 2684, 2913, 3660, 3737 |
| BstMCI | CGRYCG | 3 cut(s) | 361, 394, 2741 |
| BstNI | CCWGG | 7 cut(s) | 1170, 1428, 1515, 1593, 2307, 3177, 3873 |
| BstNSI | RCATGY | 3 cut(s) | 626, 1642, 4127 |
| BstSCI | CCNGG | 9 cut(s) | 500, 1168, 1426, 1513, 1591, 1860, 2305, 3175, 3871 |
| BstSFI | CTRYAG | 3 cut(s) | 190, 1776, 2250 |
| BstSLI | GKGCMC | 1 cut(s) | 978 |
| BstUI | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| BstV2I | GAAGAC | 5 cut(s) | 154, 169, 2847, 3153, 3510 |
| BstX2I | RGATCY | 5 cut(s) | 430, 2140, 3245, 3564, 3859 |
| BstXI | CCANNNNNNTGG | 4 cut(s) | 322, 1100, 1878, 3128 |
| BstYI | RGATCY | 5 cut(s) | 430, 2140, 3245, 3564, 3859 |
| BstZI | CGGCCG | 2 cut(s) | 391, 2738 |
| Bsu15I | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| Bsu36I | CCTNAGG | 1 cut(s) | 1850 |
| BsuTUI | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| BtgI | CCRYGG | 3 cut(s) | 394, 1546, 2204 |
| BtgZI | GCGATG | 1 cut(s) | 391 |
| BtsCI | GGATG | 9 cut(s) | 376, 709, 946, 1093, 1870, 2298, 3100, 3209, 4125 |
| BtsI | GCAGTG | 2 cut(s) | 217, 1307 |
| BtuMI | TCGCGA | 2 cut(s) | 82, 804 |
| BveI | ACCTGC | 1 cut(s) | 819 |
| CciI | TCATGA | 2 cut(s) | 1644, 2002 |
| CfoI | GCGC | 4 cut(s) | 356, 376, 401, 2211 |
| Cfr10I | RCCGGY | 3 cut(s) | 2701, 2736, 2740 |
| Cfr13I | GGNCC | 8 cut(s) | 808, 866, 1400, 1550, 2213, 2651, 3131, 3203 |
| Cfr42I | CCGCGG | 1 cut(s) | 397 |
| ClaI | ATCGAT | 3 cut(s) | 361, 369, 3757 |
| CseI | GACGC | 1 cut(s) | 1644 |
| CsiI | ACCWGGT | 1 cut(s) | 1426 |
| CspAI | ACCGGT | 1 cut(s) | 2701 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 2562, 2597 |
| DinI | GGCGCC | 2 cut(s) | 355, 400 |
| DraI | TTTAAA | 1 cut(s) | 3901 |
| DraIII | CACNNNGTG | 1 cut(s) | 1430 |
| EaeI | YGGCCR | 3 cut(s) | 391, 2738, 3675 |
| EagI | CGGCCG | 2 cut(s) | 391, 2738 |
| Eam1104I | CTCTTC | 6 cut(s) | 598, 1632, 2037, 3081, 3426, 3708 |
| EarI | CTCTTC | 6 cut(s) | 598, 1632, 2037, 3081, 3426, 3708 |
| EciI | GGCGGA | 1 cut(s) | 276 |
| Ecl136II | GAGCTC | 2 cut(s) | 800, 1568 |
| EclXI | CGGCCG | 2 cut(s) | 391, 2738 |
| Eco130I | CCWWGG | 3 cut(s) | 729, 2204, 2988 |
| Eco147I | AGGCCT | 1 cut(s) | 2440 |
| Eco24I | GRGCYC | 4 cut(s) | 802, 1249, 1570, 2089 |
| Eco47I | GGWCC | 2 cut(s) | 808, 3203 |
| Eco52I | CGGCCG | 2 cut(s) | 391, 2738 |
| Eco53kI | GAGCTC | 2 cut(s) | 800, 1568 |
| Eco81I | CCTNAGG | 1 cut(s) | 1850 |
| Eco88I | CYCGRG | 2 cut(s) | 1242, 2287 |
| EcoICRI | GAGCTC | 2 cut(s) | 800, 1568 |
| EcoO109I | RGGNCCY | 2 cut(s) | 808, 866 |
| EcoRI | GAATTC | 1 cut(s) | 2727 |
| EcoRII | CCWGG | 7 cut(s) | 1168, 1426, 1513, 1591, 2305, 3175, 3871 |
| EcoT14I | CCWWGG | 3 cut(s) | 729, 2204, 2988 |
| EcoT22I | ATGCAT | 1 cut(s) | 4125 |
| EcoT38I | GRGCYC | 4 cut(s) | 802, 1249, 1570, 2089 |
| EgeI | GGCGCC | 2 cut(s) | 355, 400 |
| EheI | GGCGCC | 2 cut(s) | 355, 400 |
| ErhI | CCWWGG | 3 cut(s) | 729, 2204, 2988 |
| Esp3I | CGTCTC | 1 cut(s) | 3660 |
| FaqI | GGGAC | 3 cut(s) | 287, 2412, 3158 |
| FauNDI | CATATG | 2 cut(s) | 1465, 3286 |
| FbaI | TGATCA | 2 cut(s) | 757, 1281 |
| FblI | GTMKAC | 1 cut(s) | 2266 |
| FokI | GGATG | 9 cut(s) | 363, 716, 953, 1080, 1877, 2305, 3107, 3196, 4132 |
| FriOI | GRGCYC | 4 cut(s) | 802, 1249, 1570, 2089 |
| FspAI | RTGCGCAY | 1 cut(s) | 375 |
| FspBI | CTAG | 5 cut(s) | 482, 1542, 1950, 2013, 2550 |
| FspI | TGCGCA | 1 cut(s) | 375 |
| GlaI | GCGC | 4 cut(s) | 355, 375, 400, 2210 |
| GsaI | CCCAGC | 1 cut(s) | 31 |
| GsuI | CTGGAG | 3 cut(s) | 444, 1191, 1497 |
| HaeII | RGCGCY | 2 cut(s) | 357, 402 |
| HapII | CCGG | 7 cut(s) | 501, 612, 1861, 2702, 2737, 2741, 3103 |
| HgaI | GACGC | 1 cut(s) | 1644 |
| HhaI | GCGC | 4 cut(s) | 356, 376, 401, 2211 |
| Hin1I | GRCGYC | 2 cut(s) | 354, 399 |
| Hin6I | GCGC | 4 cut(s) | 354, 374, 399, 2209 |
| HinP1I | GCGC | 4 cut(s) | 354, 374, 399, 2209 |
| HincII | GTYRAC | 8 cut(s) | 589, 666, 787, 1239, 1336, 1831, 2267, 3652 |
| HindII | GTYRAC | 8 cut(s) | 589, 666, 787, 1239, 1336, 1831, 2267, 3652 |
| HindIII | AAGCTT | 2 cut(s) | 2488, 3221 |
| HpaI | GTTAAC | 1 cut(s) | 787 |
| HpaII | CCGG | 7 cut(s) | 501, 612, 1861, 2702, 2737, 2741, 3103 |
| HphI | GGTGA | 5 cut(s) | 235, 521, 626, 1529, 2969 |
| Hpy99I | CGWCG | 3 cut(s) | 82, 392, 1638 |
| HpyCH4III | ACNGT | 8 cut(s) | 278, 1417, 1742, 1981, 2181, 2277, 3149, 3555 |
| HpyCH4IV | ACGT | 8 cut(s) | 317, 458, 662, 1207, 2800, 3961, 3970, 4011 |
| HpySE526I | ACGT | 8 cut(s) | 317, 458, 662, 1207, 2800, 3961, 3970, 4011 |
| Hsp92I | GRCGYC | 2 cut(s) | 354, 399 |
| HspAI | GCGC | 4 cut(s) | 354, 374, 399, 2209 |
| KasI | GGCGCC | 2 cut(s) | 353, 398 |
| KpnI | GGTACC | 1 cut(s) | 1437 |
| Ksp22I | TGATCA | 2 cut(s) | 757, 1281 |
| KspAI | GTTAAC | 1 cut(s) | 787 |
| KspI | CCGCGG | 1 cut(s) | 397 |
| LweI | GCATC | 9 cut(s) | 361, 385, 584, 868, 1018, 2920, 3433, 3622, 4110 |
| MabI | ACCWGGT | 1 cut(s) | 1426 |
| MaeI | CTAG | 5 cut(s) | 482, 1542, 1950, 2013, 2550 |
| MaeII | ACGT | 8 cut(s) | 317, 458, 662, 1207, 2800, 3961, 3970, 4011 |
| MaeIII | GTNAC | 6 cut(s) | 454, 1081, 2233, 2461, 2777, 2957 |
| MbiI | CCGCTC | 1 cut(s) | 3421 |
| MflI | RGATCY | 5 cut(s) | 430, 2140, 3245, 3564, 3859 |
| MlsI | TGGCCA | 1 cut(s) | 3677 |
| MluNI | TGGCCA | 1 cut(s) | 3677 |
| Mly113I | GGCGCC | 2 cut(s) | 354, 399 |
| MmeI | TCCRAC | 2 cut(s) | 1399, 1984 |
| Mox20I | TGGCCA | 1 cut(s) | 3677 |
| Mph1103I | ATGCAT | 1 cut(s) | 4125 |
| MroXI | GAANNNNTTC | 2 cut(s) | 3435, 4046 |
| MscI | TGGCCA | 1 cut(s) | 3677 |
| MslI | CAYNNNNRTG | 7 cut(s) | 1098, 1272, 1643, 2007, 2064, 2135, 3027 |
| Msp20I | TGGCCA | 1 cut(s) | 3677 |
| MspA1I | CMGCKG | 4 cut(s) | 396, 437, 1601, 3058 |
| MspCI | CTTAAG | 2 cut(s) | 1939, 3524 |
| MspI | CCGG | 7 cut(s) | 501, 612, 1861, 2702, 2737, 2741, 3103 |
| MspR9I | CCNGG | 9 cut(s) | 502, 1170, 1428, 1515, 1593, 1862, 2307, 3177, 3873 |
| Mva1269I | GAATGC | 1 cut(s) | 3191 |
| MvaI | CCWGG | 7 cut(s) | 1170, 1428, 1515, 1593, 2307, 3177, 3873 |
| MvnI | CGCG | 5 cut(s) | 82, 396, 804, 2211, 2886 |
| NarI | GGCGCC | 2 cut(s) | 354, 399 |
| NciI | CCSGG | 2 cut(s) | 502, 1862 |
| NcoI | CCATGG | 1 cut(s) | 2204 |
| NdeI | CATATG | 2 cut(s) | 1465, 3286 |
| NmeAIII | GCCGAG | 1 cut(s) | 114 |
| NmuCI | GTSAC | 2 cut(s) | 2777, 2957 |
| NruI | TCGCGA | 2 cut(s) | 82, 804 |
| NsbI | TGCGCA | 1 cut(s) | 375 |
| NsiI | ATGCAT | 1 cut(s) | 4125 |
| NspI | RCATGY | 3 cut(s) | 626, 1642, 4127 |
| NspV | TTCGAA | 2 cut(s) | 17, 524 |
| PaeI | GCATGC | 1 cut(s) | 1642 |
| PaeR7I | CTCGAG | 2 cut(s) | 1242, 2287 |
| PagI | TCATGA | 2 cut(s) | 1644, 2002 |
| PasI | CCCWGGG | 1 cut(s) | 3176 |
| PceI | AGGCCT | 1 cut(s) | 2440 |
| PcsI | WCGNNNNNNNCGW | 2 cut(s) | 414, 3967 |
| PctI | GAATGC | 1 cut(s) | 3191 |
| PdmI | GAANNNNTTC | 2 cut(s) | 3435, 4046 |
| PfeI | GAWTC | 5 cut(s) | 19, 363, 419, 2226, 3806 |
| Pfl23II | CGTACG | 1 cut(s) | 3270 |
| PflFI | GACNNNGTC | 1 cut(s) | 3605 |
| PflMI | CCANNNNNTGG | 2 cut(s) | 953, 1322 |
| PinAI | ACCGGT | 1 cut(s) | 2701 |
| Ple19I | CGATCG | 1 cut(s) | 361 |
| PluTI | GGCGCC | 2 cut(s) | 357, 402 |
| Ppu21I | YACGTR | 1 cut(s) | 3962 |
| PpuMI | RGGWCCY | 1 cut(s) | 808 |
| PshBI | ATTAAT | 1 cut(s) | 2616 |
| Psp124BI | GAGCTC | 2 cut(s) | 802, 1570 |
| Psp1406I | AACGTT | 1 cut(s) | 3970 |
| Psp5II | RGGWCCY | 1 cut(s) | 808 |
| Psp6I | CCWGG | 7 cut(s) | 1168, 1426, 1513, 1591, 2305, 3175, 3871 |
| PspFI | CCCAGC | 1 cut(s) | 27 |
| PspGI | CCWGG | 7 cut(s) | 1168, 1426, 1513, 1591, 2305, 3175, 3871 |
| PspLI | CGTACG | 1 cut(s) | 3270 |
| PspPI | GGNCC | 8 cut(s) | 808, 866, 1400, 1550, 2213, 2651, 3131, 3203 |
| PspPPI | RGGWCCY | 1 cut(s) | 808 |
| PspXI | VCTCGAGB | 1 cut(s) | 1242 |
| PsuI | RGATCY | 5 cut(s) | 430, 2140, 3245, 3564, 3859 |
| PsyI | GACNNNGTC | 1 cut(s) | 3605 |
| PvuI | CGATCG | 1 cut(s) | 361 |
| PvuII | CAGCTG | 3 cut(s) | 437, 1601, 3058 |
| RruI | TCGCGA | 2 cut(s) | 82, 804 |
| RseI | CAYNNNNRTG | 7 cut(s) | 1098, 1272, 1643, 2007, 2064, 2135, 3027 |
| SacI | GAGCTC | 2 cut(s) | 802, 1570 |
| SacII | CCGCGG | 1 cut(s) | 397 |
| SalI | GTCGAC | 1 cut(s) | 2265 |
| Sau96I | GGNCC | 8 cut(s) | 808, 866, 1400, 1550, 2213, 2651, 3131, 3203 |
| ScaI | AGTACT | 1 cut(s) | 3957 |
| ScrFI | CCNGG | 9 cut(s) | 502, 1170, 1428, 1515, 1593, 1862, 2307, 3177, 3873 |
| SexAI | ACCWGGT | 1 cut(s) | 1426 |
| SfaNI | GCATC | 9 cut(s) | 361, 385, 584, 868, 1018, 2920, 3433, 3622, 4110 |
| SfcI | CTRYAG | 3 cut(s) | 190, 1776, 2250 |
| SfoI | GGCGCC | 2 cut(s) | 355, 400 |
| Sfr274I | CTCGAG | 2 cut(s) | 1242, 2287 |
| Sfr303I | CCGCGG | 1 cut(s) | 397 |
| SfuI | TTCGAA | 2 cut(s) | 17, 524 |
| SgrBI | CCGCGG | 1 cut(s) | 397 |
| SinI | GGWCC | 2 cut(s) | 808, 3203 |
| SlaI | CTCGAG | 2 cut(s) | 1242, 2287 |
| SmiMI | CAYNNNNRTG | 7 cut(s) | 1098, 1272, 1643, 2007, 2064, 2135, 3027 |
| SmlI | CTYRAG | 8 cut(s) | 935, 1242, 1526, 1757, 1939, 2287, 2862, 3524 |
| SmoI | CTYRAG | 8 cut(s) | 935, 1242, 1526, 1757, 1939, 2287, 2862, 3524 |
| SphI | GCATGC | 1 cut(s) | 1642 |
| SseBI | AGGCCT | 1 cut(s) | 2440 |
| SspDI | GGCGCC | 2 cut(s) | 353, 398 |
| SspI | AATATT | 1 cut(s) | 1069 |
| SspMI | CTAG | 5 cut(s) | 482, 1542, 1950, 2013, 2550 |
| SstI | GAGCTC | 2 cut(s) | 802, 1570 |
| StuI | AGGCCT | 1 cut(s) | 2440 |
| StyD4I | CCNGG | 9 cut(s) | 500, 1168, 1426, 1513, 1591, 1860, 2305, 3175, 3871 |
| StyI | CCWWGG | 3 cut(s) | 729, 2204, 2988 |
| TaaI | ACNGT | 8 cut(s) | 278, 1417, 1742, 1981, 2181, 2277, 3149, 3555 |
| TaiI | ACGT | 8 cut(s) | 320, 461, 665, 1210, 2803, 3964, 3973, 4014 |
| TaqII | GACCGA | 1 cut(s) | 166 |
| TatI | WGTACW | 4 cut(s) | 1034, 1530, 3577, 3955 |
| TauI | GCSGC | 6 cut(s) | 67, 396, 399, 2214, 3010, 4103 |
| TfiI | GAWTC | 5 cut(s) | 19, 363, 419, 2226, 3806 |
| TseFI | GTSAC | 2 cut(s) | 2777, 2957 |
| Tsp45I | GTSAC | 2 cut(s) | 2777, 2957 |
| TspGWI | ACGGA | 3 cut(s) | 480, 2859, 3957 |
| Tth111I | GACNNNGTC | 1 cut(s) | 3605 |
| Van91I | CCANNNNNTGG | 2 cut(s) | 953, 1322 |
| Vha464I | CTTAAG | 2 cut(s) | 1939, 3524 |
| VpaK11BI | GGWCC | 2 cut(s) | 808, 3203 |
| VspI | ATTAAT | 1 cut(s) | 2616 |
| XapI | RAATTY | 6 cut(s) | 1932, 1997, 2727, 2900, 3079, 3680 |
| XceI | RCATGY | 3 cut(s) | 626, 1642, 4127 |
| XhoI | CTCGAG | 2 cut(s) | 1242, 2287 |
| XmiI | GTMKAC | 1 cut(s) | 2266 |
| XmnI | GAANNNNTTC | 2 cut(s) | 3435, 4046 |
| XspI | CTAG | 5 cut(s) | 482, 1542, 1950, 2013, 2550 |
| ZrmI | AGTACT | 1 cut(s) | 3957 |
| Zsp2I | ATGCAT | 1 cut(s) | 4125 |