pycom02g02790

Adenine nucleotide transporter BT1, chloroplastic

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0014630
Physical Location & Seq
Forward (+)
1759694 .. 1761235
1542 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g02790.2

Sequence Viewer

Length: 1233 bp
ATGGATAGGAGAAGATTGCAGGCCACTGAAAATACAAACGACGATGTAGTATTCTCTTGTTCTTCCGGGATTAGAATCCGATGCAGTCCTCTCAATAGTACTTCACAATCCGGTGGACTGTTTGCCAGCGTTGGACAAGTTGCAGGAGGATTTGGTATCACACCAAGTCCACAGAACTCCATAAACCAAACCACAAAGCTTCTGAGCTCCACGTACATGAAATATATGCCCACGCCGGATTTCGGGCTGCGAATTAGTAGGGTTGACGAGTTGGTGGAGGCAGAGGCACTGTTCGAGGTTGGAGAAGCAGAAGAGCTGCTGAAAGTTAACAAAATCAAAGGTAATGGTGGTGGTTTGAGGTTGAAAATAAAGGTTGGGAATGCATCACTGAGGAGGCTGGTGAGTGGAGCGGTGGCGGGAGTGGTGTCGCGGATGGCGGTTGCTCCGCTGGAGACGATACGGACGCATTTAATGGTGGGGGGCAGTGGCCACTCCAGTGCTTCTCATGTTTTTCAGTCTATCATGGAAACTGATGGATGGCAGGGCTTGTTCAGGGGTACTTTGGTCAATGTCATCAGGGTTGCTCCAAACAAGGCTATTGAGTTATTTGCTTATGACACGGTGAAGAAGCACTTAACTCGACCCGAAGAAGACCTGAAAATCCCTATCCCGGCTTCATCAATCGCAGGCGCTGTTGCCGGATTTAGCTCAACCTTGTGTACATACCCTCTCGAGTTGTTAAAAACACGATTAACCGTCCAGAAAGGAGTGTACAACAACTTTTTCGACGCAATTTCAAAAATTGTCCAACAGGAGGGAGCTGCAGGGCTATACAGAGGCCTCACCCCGAGTTTAATTGGCGTAATTCCATACGCTGCCTCCAACTATTTTGCTTATGACGCGCTCTCAAGAGCTTACAAGAAAGCTTTCAAAAAGGAGGAAATCGGAAACATAACAACTCTTTTGATCGAATCAGCAGCTGCTGCAATTTCGAGCAGTGCAACTTTCCCGCTTGAGGTGGCTCGGAAGAGAATGCAGGTTGGGGCTCTCAGTGGGAGGCAATACAAGCACATACTTGATGCTCTTTCGAGCATACTTGCCAGTGAAGGAATCAGTGGCTTGTACAGAGGGTTGGGGCCGAGCTACATGAAATTGGTCCCTGCTGCTGGGATTTCCTTCATGTGCTACGAGGCTTGCAAGCGGATGCTGACTGAGAGTGATGAAGAAACCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Mito_carr

Protein Analysis

411

Amino Acids

44.1

Weight (kDa)

9.2

Isoelectric Point (pI)

46.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0014630)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03510
malus_domestica MD02G1034100.v1.1 MD15G1174900.v1.1
prunus_persica Prupe.7G241000_v2.0.a1
pyrus_communis pycom02g02790 pycom15g15640
rosa_chinensis RchiOBHm_Chr2g0088721
rosa_laevigata RLG00000015979
rosa_multiflora Rmu_sc0006835.1_g000004
rosa_roxburghii Rroxscaffold_2G00152370
rosa_rugosa Rorug01G0486500 Rorug01G0486600
rosa_samantha Rh2AG041700 Rh2BG040400 Rh2CG041200 Rh2DG040800
rosa_wichuraiana Rw2G003270

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1027
AccBSI CCGCTC 1 cut(s) 410
AccII CGCG 2 cut(s) 430, 902
AciI CCGC 7 cut(s) 410, 416, 430, 437, 446, 1010, 1201
AcoI YGGCCR 1 cut(s) 487
AfaI GTAC 6 cut(s) 100, 215, 559, 721, 773, 1124
AfiI CCNNNNNNNGG 5 cut(s) 242, 670, 814, 1015, 1166
AgsI TTSAA 3 cut(s) 364, 798, 931
AleI CACNNNNGTG 1 cut(s) 495
AluBI AGCT 9 cut(s) 199, 207, 316, 708, 821, 914, 926, 980, 1143
AluI AGCT 9 cut(s) 199, 207, 316, 708, 821, 914, 926, 980, 1143
Alw21I GWGCWC 1 cut(s) 209
Alw26I GTCTC 1 cut(s) 446
AlwNI CAGNNNCTG 3 cut(s) 692, 980, 983
Ama87I CYCGRG 2 cut(s) 731, 847
AoxI GGCC 4 cut(s) 21, 487, 838, 1136
ApeKI GCWGC 8 cut(s) 247, 316, 821, 875, 977, 980, 983, 1163
Asp700I GAANNNNTTC 1 cut(s) 926
AspLEI GCGC 2 cut(s) 692, 904
AspS9I GGNCC 2 cut(s) 1136, 1156
AsuC2I CCSGG 2 cut(s) 67, 671
AsuHPI GGTGA 3 cut(s) 412, 634, 835
AvaI CYCGRG 2 cut(s) 731, 847
AvaII GGWCC 1 cut(s) 1156
BaeI ACNNNNGTAYC 2 cut(s) 549, 582
BalI TGGCCA 1 cut(s) 489
BanII GRGCYC 2 cut(s) 209, 1048
BbsI GAAGAC 1 cut(s) 657
Bbv12I GWGCWC 1 cut(s) 209
BbvI GCAGC 8 cut(s) 234, 303, 808, 862, 967, 970, 989, 1150
BccI CCATC 3 cut(s) 427, 527, 531
BcgI CGANNNNNNTGC 2 cut(s) 620, 654
BcnI CCSGG 2 cut(s) 67, 671
BcoDI GTCTC 1 cut(s) 446
BfmI CTRYAG 1 cut(s) 822
BfoI RGCGCY 1 cut(s) 693
BfuAI ACCTGC 1 cut(s) 1027
BisI GCNGC 8 cut(s) 248, 317, 822, 876, 978, 981, 984, 1164
BlsI GCNGC 8 cut(s) 249, 318, 823, 877, 979, 982, 985, 1165
BmcAI AGTACT 1 cut(s) 100
Bme1390I CCNGG 2 cut(s) 67, 671
Bme18I GGWCC 1 cut(s) 1156
BmeT110I CYCGRG 2 cut(s) 731, 847
BmgT120I GGNCC 2 cut(s) 1136, 1156
BmiI GGNNCC 2 cut(s) 1137, 1158
BmrFI CCNGG 2 cut(s) 67, 671
BmsI GCATC 4 cut(s) 71, 392, 1069, 1194
BpiI GAAGAC 1 cut(s) 657
BpmI CTGGAG 2 cut(s) 470, 478
BpuEI CTTGAG 2 cut(s) 892, 1034
BpuMI CCSGG 2 cut(s) 67, 671
BsaAI YACGTR 1 cut(s) 213
BsaBI GATNNNNATC 1 cut(s) 74
BsaWI WCCGGW 1 cut(s) 110
BsaXI ACNNNNNCTCC 2 cut(s) 863, 893
Bsc4I CCNNNNNNNGG 5 cut(s) 242, 670, 814, 1015, 1166
Bse1I ACTGG 2 cut(s) 495, 1101
Bse8I GATNNNNATC 1 cut(s) 74
BseGI GGATG 3 cut(s) 438, 542, 1209
BseJI GATNNNNATC 1 cut(s) 74
BseLI CCNNNNNNNGG 5 cut(s) 242, 670, 814, 1015, 1166
BseMII CTCAG 4 cut(s) 194, 380, 1063, 1203
BseNI ACTGG 2 cut(s) 495, 1101
BseRI GAGGAG 1 cut(s) 406
BseXI GCAGC 8 cut(s) 234, 303, 808, 862, 967, 970, 989, 1150
BseYI CCCAGC 1 cut(s) 1166
Bsh1236I CGCG 2 cut(s) 430, 902
BshFI GGCC 4 cut(s) 23, 489, 840, 1138
BsiHKAI GWGCWC 1 cut(s) 209
BsiHKCI CYCGRG 2 cut(s) 731, 847
BsiSI CCGG 5 cut(s) 66, 111, 236, 671, 699
BslFI GGGAC 1 cut(s) 1142
BslI CCNNNNNNNGG 5 cut(s) 242, 670, 814, 1015, 1166
BsmAI GTCTC 1 cut(s) 446
BsmBI CGTCTC 1 cut(s) 446
BsmFI GGGAC 1 cut(s) 1142
BsmI GAATGC 2 cut(s) 385, 1038
BsnI GGCC 4 cut(s) 23, 489, 840, 1138
BsoBI CYCGRG 2 cut(s) 731, 847
Bsp1286I GDGCHC 2 cut(s) 209, 1048
Bsp1407I TGTACA 3 cut(s) 719, 771, 1122
Bsp143I GATC 1 cut(s) 966
BspACI CCGC 7 cut(s) 410, 416, 430, 437, 446, 1010, 1201
BspANI GGCC 4 cut(s) 23, 489, 840, 1138
BspCNI CTCAG 4 cut(s) 195, 381, 1062, 1204
BspFNI CGCG 2 cut(s) 430, 902
BspLI GGNNCC 2 cut(s) 1137, 1158
BspMAI CTGCAG 1 cut(s) 826
BspMI ACCTGC 1 cut(s) 1027
BspQI GCTCTTC 1 cut(s) 306
BsrBI CCGCTC 1 cut(s) 410
BsrGI TGTACA 3 cut(s) 719, 771, 1122
BsrI ACTGG 2 cut(s) 495, 1101
BssMI GATC 1 cut(s) 966
Bst4CI ACNGT 4 cut(s) 120, 291, 622, 757
Bst6I CTCTTC 2 cut(s) 306, 1022
BstAPI GCANNNNNTGC 1 cut(s) 983
BstAUI TGTACA 3 cut(s) 719, 771, 1122
BstBAI YACGTR 1 cut(s) 213
BstC8I GCNNGC 5 cut(s) 21, 127, 688, 1195, 1199
BstDEI CTNAG 4 cut(s) 203, 389, 1049, 1212
BstF5I GGATG 3 cut(s) 438, 542, 1209
BstFNI CGCG 2 cut(s) 430, 902
BstH2I RGCGCY 1 cut(s) 693
BstHHI GCGC 2 cut(s) 692, 904
BstKTI GATC 1 cut(s) 969
BstMAI GTCTC 1 cut(s) 446
BstMBI GATC 1 cut(s) 966
BstMWI GCNNNNNNNGC 3 cut(s) 899, 983, 1066
BstSCI CCNGG 2 cut(s) 65, 669
BstSFI CTRYAG 1 cut(s) 822
BstUI CGCG 2 cut(s) 430, 902
BstV1I GCAGC 8 cut(s) 234, 303, 808, 862, 967, 970, 989, 1150
BstV2I GAAGAC 1 cut(s) 657
BsuRI GGCC 4 cut(s) 23, 489, 840, 1138
BtsCI GGATG 3 cut(s) 438, 542, 1209
BtsI GCAGTG 2 cut(s) 490, 1003
BtsIMutI CAGTG 9 cut(s) 24, 287, 386, 490, 502, 1003, 1057, 1108, 1120
BveI ACCTGC 1 cut(s) 1027
Cac8I GCNNGC 5 cut(s) 21, 127, 688, 1195, 1199
CaiI CAGNNNCTG 3 cut(s) 692, 980, 983
CfoI GCGC 2 cut(s) 692, 904
Cfr13I GGNCC 2 cut(s) 1136, 1156
CseI GACGC 3 cut(s) 472, 797, 908
Csp6I GTAC 6 cut(s) 99, 214, 558, 720, 772, 1123
CviAII CATG 5 cut(s) 217, 506, 523, 1147, 1180
CviQI GTAC 6 cut(s) 99, 214, 558, 720, 772, 1123
DdeI CTNAG 4 cut(s) 203, 389, 1049, 1212
DpnI GATC 1 cut(s) 968
DpnII GATC 1 cut(s) 966
EaeI YGGCCR 1 cut(s) 487
Eam1104I CTCTTC 2 cut(s) 306, 1022
EarI CTCTTC 2 cut(s) 306, 1022
Ecl136II GAGCTC 1 cut(s) 207
Eco147I AGGCCT 1 cut(s) 840
Eco24I GRGCYC 2 cut(s) 209, 1048
Eco47I GGWCC 1 cut(s) 1156
Eco53kI GAGCTC 1 cut(s) 207
Eco88I CYCGRG 2 cut(s) 731, 847
EcoICRI GAGCTC 1 cut(s) 207
EcoT22I ATGCAT 1 cut(s) 385
EcoT38I GRGCYC 2 cut(s) 209, 1048
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 5 cut(s) 220, 509, 526, 1150, 1183
FalI AAGNNNNNCTT 2 cut(s) 617, 649
FaqI GGGAC 1 cut(s) 1142
FatI CATG 5 cut(s) 216, 505, 522, 1146, 1179
FauI CCCGC 2 cut(s) 409, 1017
Fnu4HI GCNGC 8 cut(s) 248, 317, 822, 876, 978, 981, 984, 1164
FokI GGATG 3 cut(s) 445, 549, 1216
FriOI GRGCYC 2 cut(s) 209, 1048
Fsp4HI GCNGC 8 cut(s) 248, 317, 822, 876, 978, 981, 984, 1164
GlaI GCGC 2 cut(s) 691, 903
GluI GCNGC 8 cut(s) 248, 317, 822, 876, 978, 981, 984, 1164
GsaI CCCAGC 1 cut(s) 1170
GsuI CTGGAG 2 cut(s) 470, 478
HaeII RGCGCY 1 cut(s) 693
HaeIII GGCC 4 cut(s) 23, 489, 840, 1138
HapII CCGG 5 cut(s) 66, 111, 236, 671, 699
HgaI GACGC 3 cut(s) 472, 797, 908
HhaI GCGC 2 cut(s) 692, 904
Hin1II CATG 5 cut(s) 220, 509, 526, 1150, 1183
Hin6I GCGC 2 cut(s) 690, 902
HinP1I GCGC 2 cut(s) 690, 902
HincII GTYRAC 2 cut(s) 265, 328
HindII GTYRAC 2 cut(s) 265, 328
HindIII AAGCTT 2 cut(s) 197, 924
HinfI GANTC 3 cut(s) 75, 971, 1110
HpaI GTTAAC 1 cut(s) 328
HpaII CCGG 5 cut(s) 66, 111, 236, 671, 699
HphI GGTGA 3 cut(s) 412, 634, 835
Hpy166II GTNNAC 6 cut(s) 116, 170, 265, 328, 720, 772
Hpy188I TCNGA 4 cut(s) 80, 204, 947, 1026
Hpy188III TCNNGA 3 cut(s) 731, 760, 909
Hpy8I GTNNAC 6 cut(s) 116, 170, 265, 328, 720, 772
Hpy99I CGWCG 2 cut(s) 44, 791
HpyAV CCTTC 2 cut(s) 1100, 1186
HpyCH4III ACNGT 4 cut(s) 120, 291, 622, 757
HpyCH4IV ACGT 1 cut(s) 212
HpyCH4V TGCA 9 cut(s) 19, 84, 143, 383, 824, 986, 1001, 1036, 1197
HpyF10VI GCNNNNNNNGC 3 cut(s) 899, 983, 1066
HpyF3I CTNAG 4 cut(s) 203, 389, 1049, 1212
HpySE526I ACGT 1 cut(s) 212
Hsp92II CATG 5 cut(s) 220, 509, 526, 1150, 1183
HspAI GCGC 2 cut(s) 690, 902
KspAI GTTAAC 1 cut(s) 328
Kzo9I GATC 1 cut(s) 966
LguI GCTCTTC 1 cut(s) 306
LmnI GCTCC 5 cut(s) 212, 407, 448, 589, 818
Lsp1109I GCAGC 8 cut(s) 234, 303, 808, 862, 967, 970, 989, 1150
LweI GCATC 4 cut(s) 71, 392, 1069, 1194
MaeII ACGT 1 cut(s) 212
MalI GATC 1 cut(s) 968
MbiI CCGCTC 1 cut(s) 410
MboI GATC 1 cut(s) 966
MboII GAAGA 7 cut(s) 24, 54, 323, 637, 659, 662, 1039
MhlI GDGCHC 2 cut(s) 209, 1048
MlsI TGGCCA 1 cut(s) 489
MluCI AATT 7 cut(s) 252, 792, 801, 855, 864, 987, 1151
MluNI TGGCCA 1 cut(s) 489
MmeI TCCRAC 4 cut(s) 112, 280, 832, 906
Mox20I TGGCCA 1 cut(s) 489
Mph1103I ATGCAT 1 cut(s) 385
MroXI GAANNNNTTC 1 cut(s) 926
MscI TGGCCA 1 cut(s) 489
MseI TTAA 6 cut(s) 327, 470, 635, 740, 752, 854
MslI CAYNNNNRTG 2 cut(s) 215, 495
Msp20I TGGCCA 1 cut(s) 489
MspA1I CMGCKG 2 cut(s) 448, 980
MspI CCGG 5 cut(s) 66, 111, 236, 671, 699
MspR9I CCNGG 2 cut(s) 67, 671
Mva1269I GAATGC 2 cut(s) 385, 1038
MvnI CGCG 2 cut(s) 430, 902
MwoI GCNNNNNNNGC 3 cut(s) 899, 983, 1066
NciI CCSGG 2 cut(s) 67, 671
NdeII GATC 1 cut(s) 966
NlaIII CATG 5 cut(s) 220, 509, 526, 1150, 1183
NlaIV GGNNCC 2 cut(s) 1137, 1158
NmeAIII GCCGAG 1 cut(s) 1164
NsiI ATGCAT 1 cut(s) 385
OliI CACNNNNGTG 1 cut(s) 495
PaeR7I CTCGAG 1 cut(s) 731
PceI AGGCCT 1 cut(s) 840
PciSI GCTCTTC 1 cut(s) 306
PctI GAATGC 2 cut(s) 385, 1038
PdmI GAANNNNTTC 1 cut(s) 926
PfeI GAWTC 3 cut(s) 75, 971, 1110
PfoI TCCNGGA 1 cut(s) 65
PkrI GCNGC 8 cut(s) 249, 318, 823, 877, 979, 982, 985, 1165
Ppu21I YACGTR 1 cut(s) 213
Psp124BI GAGCTC 1 cut(s) 209
PspFI CCCAGC 1 cut(s) 1166
PspN4I GGNNCC 2 cut(s) 1137, 1158
PspPI GGNCC 2 cut(s) 1136, 1156
PstI CTGCAG 1 cut(s) 826
PstNI CAGNNNCTG 3 cut(s) 692, 980, 983
PvuII CAGCTG 1 cut(s) 980
RsaI GTAC 6 cut(s) 100, 215, 559, 721, 773, 1124
RsaNI GTAC 6 cut(s) 99, 214, 558, 720, 772, 1123
RseI CAYNNNNRTG 2 cut(s) 215, 495
SacI GAGCTC 1 cut(s) 209
SapI GCTCTTC 1 cut(s) 306
SaqAI TTAA 6 cut(s) 327, 470, 635, 740, 752, 854
SatI GCNGC 8 cut(s) 248, 317, 822, 876, 978, 981, 984, 1164
Sau3AI GATC 1 cut(s) 966
Sau96I GGNCC 2 cut(s) 1136, 1156
ScaI AGTACT 1 cut(s) 100
ScrFI CCNGG 2 cut(s) 67, 671
SduI GDGCHC 2 cut(s) 209, 1048
SfaNI GCATC 4 cut(s) 71, 392, 1069, 1194
SfcI CTRYAG 1 cut(s) 822
Sfr274I CTCGAG 1 cut(s) 731
SinI GGWCC 1 cut(s) 1156
SlaI CTCGAG 1 cut(s) 731
SmiMI CAYNNNNRTG 2 cut(s) 215, 495
SmlI CTYRAG 3 cut(s) 731, 907, 1013
SmoI CTYRAG 3 cut(s) 731, 907, 1013
Sse9I AATT 7 cut(s) 252, 792, 801, 855, 864, 987, 1151
SseBI AGGCCT 1 cut(s) 840
SsiI CCGC 7 cut(s) 410, 416, 430, 437, 446, 1010, 1201
SstI GAGCTC 1 cut(s) 209
StuI AGGCCT 1 cut(s) 840
StyD4I CCNGG 2 cut(s) 65, 669
TaaI ACNGT 4 cut(s) 120, 291, 622, 757
TaiI ACGT 1 cut(s) 215
TaqI TCGA 7 cut(s) 294, 640, 732, 786, 969, 992, 1088
TasI AATT 7 cut(s) 252, 792, 801, 855, 864, 987, 1151
TatI WGTACW 4 cut(s) 98, 719, 771, 1122
TfiI GAWTC 3 cut(s) 75, 971, 1110
Tru1I TTAA 6 cut(s) 327, 470, 635, 740, 752, 854
Tru9I TTAA 6 cut(s) 327, 470, 635, 740, 752, 854
TscAI CASTG 9 cut(s) 31, 294, 393, 490, 502, 1003, 1057, 1108, 1120
TseI GCWGC 8 cut(s) 247, 316, 821, 875, 977, 980, 983, 1163
TspDTI ATGAA 4 cut(s) 233, 666, 1163, 1168
TspGWI ACGGA 1 cut(s) 475
TspRI CASTG 9 cut(s) 31, 294, 393, 490, 502, 1003, 1057, 1108, 1120
VpaK11BI GGWCC 1 cut(s) 1156
XhoI CTCGAG 1 cut(s) 731
XmnI GAANNNNTTC 1 cut(s) 926
ZrmI AGTACT 1 cut(s) 100
Zsp2I ATGCAT 1 cut(s) 385
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.