Rorug01G0486600

Adenine nucleotide transporter BT1, chloroplastic

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
57250908 .. 57254509
3602 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0486600.1

Sequence Viewer

Length: 855 bp
ATGTGGCATAAATGGAAGGAGAAGTTCATGTGCAAATTCTCCAAGTACATCAAATATTTGCAGGGGATTGACCACACTATACCAATGGTGAATCCAAATCTTCCCCGTCGTCCAACTATATGTTATAGGCCTATACAACCAGCTGACCTTGAGATCTTGGAGCAAATCCATACTGATTTATTTCCCATCAGGTATGAGTCCGAGTTTTTTCAAAATGTAGTGAATGGACAAGATATTGTGTCATGGGCAGCTGTTGATCGAAGTCGTCCAAATGGTCAAAGTGACGAACTAATTGGATTTGTAACTGCACGAATTGTCCTTGCAAGAGAAAGTGAGATAGGGGATTTGCTCAATTATGACCCATCAAAACCAGATCAGACCTTAGTCTACATTCTGACGCTAGGAGTTGTAGAATCTTTCAGAAATCTTGGCATAGCTTCTGCACTTATTCGTGAGGTCATAAAATATGCCTCAAGTATACCGACCTGCAGGGCAGTTTACCTGCACGTCATTTCTTACAATAATCCTGCAATCCTTTTGTACAAGAAAATGTCATTCAAGTGTGTAAGAAGATTGCAAGGCTTTTACTTGATCGATGGTCAGCATTATGATTCTTATCTGTTTGTTTACTATGTAAATGGCGGTCGATCTCCTTGCTCACCATTAGAGCTTGTTACAGCGACACTGAATCATATGAGGAATGGTTTGAAGTTGGTGTTTGGAAGACTACGGAAGAACGAAGATAGGAAGTTGGTCTCAAAATGGTCGAAATGTAAAGAGAGCCATTGCCTTATATCGACAACACAAAGCAGGAAAAACCTGACAGCAGAATGTACAGGGTATGAATGTGTTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

284

Amino Acids

32.8

Weight (kDa)

9.11

Isoelectric Point (pI)

47.28

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Acetyltransf_1 PF00583 80 - 186 8.5e-13 Acetyltransferase (GNAT) family
Acetyltransf_7 PF13508 97 - 187 5.3e-06 Acetyltransferase (GNAT) domain
Acetyltransf_4 PF13420 133 - 206 3.3e-06 Acetyltransferase (GNAT) domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 494, 510
AccI GTMKAC 2 cut(s) 387, 478
AciI CCGC 1 cut(s) 642
AcsI RAATTY 1 cut(s) 35
AfaI GTAC 3 cut(s) 47, 542, 835
AgsI TTSAA 3 cut(s) 212, 559, 709
AjiI CACGTC 1 cut(s) 508
AluBI AGCT 4 cut(s) 143, 251, 437, 670
AluI AGCT 4 cut(s) 143, 251, 437, 670
Alw26I GTCTC 1 cut(s) 760
AoxI GGCC 1 cut(s) 128
ApeKI GCWGC 1 cut(s) 248
ApoI RAATTY 1 cut(s) 35
AsuHPI GGTGA 2 cut(s) 100, 651
BbsI GAAGAC 1 cut(s) 730
BbvI GCAGC 1 cut(s) 260
BccI CCATC 3 cut(s) 194, 370, 590
BcgI CGANNNNNNTGC 2 cut(s) 636, 670
BcoDI GTCTC 1 cut(s) 760
BfaI CTAG 1 cut(s) 401
BfmI CTRYAG 1 cut(s) 487
BfuAI ACCTGC 2 cut(s) 494, 510
BglII AGATCT 1 cut(s) 153
BisI GCNGC 1 cut(s) 249
BlsI GCNGC 1 cut(s) 250
BmgBI CACGTC 1 cut(s) 508
BoxI GACNNNNGTC 1 cut(s) 383
BpiI GAAGAC 1 cut(s) 730
BpuEI CTTGAG 2 cut(s) 170, 457
Bsa29I ATCGAT 1 cut(s) 594
BsaBI GATNNNNATC 1 cut(s) 615
BsaI GGTCTC 1 cut(s) 760
Bse3DI GCAATG 1 cut(s) 784
Bse8I GATNNNNATC 1 cut(s) 615
BseCI ATCGAT 1 cut(s) 594
BseJI GATNNNNATC 1 cut(s) 615
BseMI GCAATG 1 cut(s) 784
BseXI GCAGC 1 cut(s) 260
BsgI GTGCAG 3 cut(s) 291, 426, 488
Bsh1285I CGRYCG 1 cut(s) 646
BshFI GGCC 1 cut(s) 130
BshVI ATCGAT 1 cut(s) 594
BsiEI CGRYCG 1 cut(s) 646
BsmAI GTCTC 1 cut(s) 760
BsnI GGCC 1 cut(s) 130
Bso31I GGTCTC 1 cut(s) 760
Bsp1407I TGTACA 2 cut(s) 540, 833
Bsp143I GATC 5 cut(s) 153, 256, 373, 591, 647
BspACI CCGC 1 cut(s) 642
BspANI GGCC 1 cut(s) 130
BspDI ATCGAT 1 cut(s) 594
BspMAI CTGCAG 1 cut(s) 491
BspMI ACCTGC 2 cut(s) 494, 510
BspTNI GGTCTC 1 cut(s) 760
BsrDI GCAATG 1 cut(s) 784
BsrGI TGTACA 2 cut(s) 540, 833
BssMI GATC 5 cut(s) 153, 256, 373, 591, 647
BssNAI GTATAC 1 cut(s) 479
Bst1107I GTATAC 1 cut(s) 479
BstAUI TGTACA 2 cut(s) 540, 833
BstDEI CTNAG 1 cut(s) 382
BstKTI GATC 5 cut(s) 156, 259, 376, 594, 650
BstMAI GTCTC 1 cut(s) 760
BstMBI GATC 5 cut(s) 153, 256, 373, 591, 647
BstMCI CGRYCG 1 cut(s) 646
BstPAI GACNNNNGTC 1 cut(s) 383
BstSFI CTRYAG 1 cut(s) 487
BstV1I GCAGC 1 cut(s) 260
BstV2I GAAGAC 1 cut(s) 730
BstX2I RGATCY 1 cut(s) 153
BstYI RGATCY 1 cut(s) 153
BstZ17I GTATAC 1 cut(s) 479
Bsu15I ATCGAT 1 cut(s) 594
BsuRI GGCC 1 cut(s) 130
BsuTUI ATCGAT 1 cut(s) 594
BtrI CACGTC 1 cut(s) 508
BtsIMutI CAGTG 1 cut(s) 683
BveI ACCTGC 2 cut(s) 494, 510
ClaI ATCGAT 1 cut(s) 594
CseI GACGC 1 cut(s) 406
Csp6I GTAC 3 cut(s) 46, 541, 834
CviAII CATG 2 cut(s) 28, 243
CviJI RGCY 7 cut(s) 130, 143, 251, 437, 582, 670, 783
CviKI_1 RGCY 7 cut(s) 130, 143, 251, 437, 582, 670, 783
CviQI GTAC 3 cut(s) 46, 541, 834
DdeI CTNAG 1 cut(s) 382
DpnI GATC 5 cut(s) 155, 258, 375, 593, 649
DpnII GATC 5 cut(s) 153, 256, 373, 591, 647
Eco147I AGGCCT 1 cut(s) 130
Eco31I GGTCTC 1 cut(s) 760
FaeI CATG 2 cut(s) 31, 246
FatI CATG 2 cut(s) 27, 242
FauNDI CATATG 1 cut(s) 693
FblI GTMKAC 2 cut(s) 387, 478
Fnu4HI GCNGC 1 cut(s) 249
Fsp4HI GCNGC 1 cut(s) 249
FspBI CTAG 1 cut(s) 401
GluI GCNGC 1 cut(s) 249
HaeIII GGCC 1 cut(s) 130
HgaI GACGC 1 cut(s) 406
Hin1II CATG 2 cut(s) 31, 246
HinfI GANTC 5 cut(s) 91, 197, 413, 611, 688
HphI GGTGA 2 cut(s) 100, 651
Hpy166II GTNNAC 4 cut(s) 388, 479, 499, 628
Hpy188I TCNGA 4 cut(s) 202, 378, 396, 422
Hpy188III TCNNGA 1 cut(s) 452
Hpy8I GTNNAC 4 cut(s) 388, 479, 499, 628
Hpy99I CGWCG 1 cut(s) 111
HpyAV CCTTC 1 cut(s) 10
HpyCH4IV ACGT 1 cut(s) 507
HpyCH4V TGCA 9 cut(s) 33, 61, 308, 323, 443, 489, 505, 530, 577
HpyF3I CTNAG 1 cut(s) 382
HpySE526I ACGT 1 cut(s) 507
Hsp92II CATG 2 cut(s) 31, 246
Kzo9I GATC 5 cut(s) 153, 256, 373, 591, 647
LmnI GCTCC 1 cut(s) 160
Lsp1109I GCAGC 1 cut(s) 260
MaeI CTAG 1 cut(s) 401
MaeII ACGT 1 cut(s) 507
MaeIII GTNAC 3 cut(s) 281, 301, 673
MalI GATC 5 cut(s) 155, 258, 375, 593, 649
MboI GATC 5 cut(s) 153, 256, 373, 591, 647
MboII GAAGA 5 cut(s) 92, 582, 735, 745, 752
MflI RGATCY 1 cut(s) 153
MluCI AATT 4 cut(s) 35, 291, 312, 352
MlyI GAGTC 1 cut(s) 206
MmeI TCCRAC 1 cut(s) 137
MnlI CCTC 3 cut(s) 448, 481, 690
MslI CAYNNNNRTG 1 cut(s) 559
MspA1I CMGCKG 2 cut(s) 143, 251
NdeI CATATG 1 cut(s) 693
NdeII GATC 5 cut(s) 153, 256, 373, 591, 647
NlaIII CATG 2 cut(s) 31, 246
NmuCI GTSAC 1 cut(s) 281
PceI AGGCCT 1 cut(s) 130
PfeI GAWTC 4 cut(s) 91, 413, 611, 688
PkrI GCNGC 1 cut(s) 250
PleI GAGTC 1 cut(s) 205
PpsI GAGTC 1 cut(s) 205
PshAI GACNNNNGTC 1 cut(s) 383
PstI CTGCAG 1 cut(s) 491
PsuI RGATCY 1 cut(s) 153
PvuII CAGCTG 2 cut(s) 143, 251
RsaI GTAC 3 cut(s) 47, 542, 835
RsaNI GTAC 3 cut(s) 46, 541, 834
RseI CAYNNNNRTG 1 cut(s) 559
SatI GCNGC 1 cut(s) 249
Sau3AI GATC 5 cut(s) 153, 256, 373, 591, 647
SbfI CCTGCAGG 1 cut(s) 491
SchI GAGTC 1 cut(s) 206
SdaI CCTGCAGG 1 cut(s) 491
SfcI CTRYAG 1 cut(s) 487
SmiMI CAYNNNNRTG 1 cut(s) 559
SmlI CTYRAG 2 cut(s) 149, 472
SmoI CTYRAG 2 cut(s) 149, 472
Sse8387I CCTGCAGG 1 cut(s) 491
Sse9I AATT 4 cut(s) 35, 291, 312, 352
SseBI AGGCCT 1 cut(s) 130
SsiI CCGC 1 cut(s) 642
SspI AATATT 1 cut(s) 56
SspMI CTAG 1 cut(s) 401
StuI AGGCCT 1 cut(s) 130
TaiI ACGT 1 cut(s) 510
TaqI TCGA 5 cut(s) 259, 594, 646, 767, 797
TasI AATT 4 cut(s) 35, 291, 312, 352
TatI WGTACW 3 cut(s) 45, 540, 833
TfiI GAWTC 4 cut(s) 91, 413, 611, 688
TscAI CASTG 1 cut(s) 690
TseFI GTSAC 1 cut(s) 281
TseI GCWGC 1 cut(s) 248
Tsp45I GTSAC 1 cut(s) 281
TspDTI ATGAA 1 cut(s) 16
TspGWI ACGGA 1 cut(s) 745
TspRI CASTG 1 cut(s) 690
XapI RAATTY 1 cut(s) 35
XmiI GTMKAC 2 cut(s) 387, 478
XspI CTAG 1 cut(s) 401
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.