RchiOBHm_Chr2g0090631

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
2
OG0000213
Physical Location & Seq
Forward (+)
4392847 .. 4394311
1465 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ46587

Sequence Viewer

Length: 1293 bp
ATGTCCCCCAAAAAGTGGCTCAACCTAGCCAACAGATCCAGCGATCGGGAAGACGAACGGCGTCATCGGCTTCGACGCTGCCGTGAACCACCGCATCATAAGGCTGATAAGCACAGGAAGTCTAAGAAGAAGAGAAGTGAGAAGCTGAAGTTGAACGAGGAGGAGGCTAACAAGTCTCTGTACATATGTCACATTGAGCACCACCCTGGAAGGTGGGTCGCTTATGTTGTCCGCGCCATCAACTTGTCCGATTTGTTGTTGTCATCAGAAGACGATGATGGTTTGCAATTACGGCAAGTGGGTTATAAGGCCGGGGATGAACTCCCGGGGTCTGTGGGTTGCGGTGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGGCCGTATGCCTTCATTTGATCGTCCCGACATAGTTTGGCATAGAGATGTTTACGCCTTTGAAACTGACCCCAACAAGCAGCCTCGTGATAATAGTAGAATTACCAAGATGGGTGGCACATTAGTTGAAGCCAAGTATCTTCCTCGGATGGAGGAGGTGGGGGGCAAACTGTATGCACTTTCATATAGGCTGGTGGCTGATCCTCCCTCATTTGAGGTATTTGACCCGAAAGTGGGGACTTGGGCACCCCTGCCCCAGCCTCCATTCTTCAAACATCTTGGTCAGTATAACCGTGGTGGCTTCCTCTCTTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGGCGAGATGTCCTGTGTTCTGTTTCGATGTAGCTCACCCAGACAGAGAATGGAGATTAGTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGTAAACAAAGCTTTGGTCCTGGACCTGCCGGCGGGTGCTGATGACAAGAAGAAGATAATGTTTGCCTATAGTTTTGGTCGTTGGTATCTAGGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCGATCACCCGAATTGGTGATTTTCAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCACAAAGATGTTATTTTGTCCATATAGGAGGTCAGAAAGCCTGCATTGTTGCCCCCGAATTGGTTAGGCCATATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACAGGGTGTTGCCATACCATTTCAATTTGAAGTTGATATCACCAAGGTCGACAAGGATGAGAAGAATTGTTTGACCCTCCAATTCATGCCTACTCGTATCTTCGAATTCTATACCAACCCGTCCACTTTTCCTGATCCTGAAGCGGAAGGTTGCTTTGTGCTATAA

Protein Analysis

430

Amino Acids

49.32

Weight (kDa)

8.81

Isoelectric Point (pI)

50.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 170 - 281 6.7e-11 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 861
AccB1I GGYRCC 2 cut(s) 634, 713
AccB7I CCANNNNNTGG 1 cut(s) 15
AccI GTMKAC 1 cut(s) 1176
AccII CGCG 2 cut(s) 234, 813
AciI CCGC 8 cut(s) 92, 232, 342, 372, 390, 813, 860, 1271
AclWI GGATC 3 cut(s) 30, 584, 1256
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 2 cut(s) 1007, 1232
AcuI CTGAAG 2 cut(s) 167, 1287
AcyI GRCGYC 1 cut(s) 61
AdeI CACNNNGTG 1 cut(s) 1133
AfaI GTAC 1 cut(s) 182
AfiI CCNNNNNNNGG 6 cut(s) 15, 45, 622, 623, 859, 1072
AgsI TTSAA 6 cut(s) 154, 452, 518, 661, 1151, 1157
AjnI CCWGG 2 cut(s) 205, 846
AluBI AGCT 4 cut(s) 145, 767, 839, 982
AluI AGCT 4 cut(s) 145, 767, 839, 982
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 3 cut(s) 180, 735, 799
AlwI GGATC 3 cut(s) 30, 584, 1256
AlwNI CAGNNNCTG 1 cut(s) 710
Ama87I CYCGRG 1 cut(s) 325
AoxI GGCC 4 cut(s) 309, 391, 814, 1079
ApeKI GCWGC 3 cut(s) 78, 469, 982
ApoI RAATTY 2 cut(s) 1007, 1232
ArsI GACNNNNNNTTYG 2 cut(s) 828, 860
AspLEI GCGC 1 cut(s) 236
AspS9I GGNCC 4 cut(s) 815, 844, 850, 1094
AsuC2I CCSGG 4 cut(s) 313, 326, 327, 358
AsuHPI GGTGA 4 cut(s) 761, 952, 983, 1159
AsuII TTCGAA 1 cut(s) 1230
AvaI CYCGRG 1 cut(s) 325
AvaII GGWCC 3 cut(s) 844, 850, 1094
AxyI CCTNAGG 1 cut(s) 996
BaeGI GKGCMC 1 cut(s) 637
BanI GGYRCC 2 cut(s) 634, 713
BanII GRGCYC 1 cut(s) 356
BauI CACGAG 1 cut(s) 474
BbsI GAAGAC 2 cut(s) 57, 276
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 3 cut(s) 65, 481, 969
BccI CCATC 4 cut(s) 245, 272, 493, 532
BceAI ACGGC 4 cut(s) 66, 74, 308, 378
BciT130I CCWGG 2 cut(s) 207, 848
BcnI CCSGG 4 cut(s) 313, 326, 327, 358
BcoDI GTCTC 3 cut(s) 180, 735, 799
BfaI CTAG 2 cut(s) 26, 917
BfmI CTRYAG 1 cut(s) 895
BfuAI ACCTGC 1 cut(s) 861
BglI GCCNNNNNGGC 1 cut(s) 813
BisI GCNGC 6 cut(s) 79, 372, 391, 470, 814, 983
BlsI GCNGC 6 cut(s) 80, 373, 392, 471, 815, 984
Bme1390I CCNGG 6 cut(s) 207, 313, 326, 327, 358, 848
Bme18I GGWCC 3 cut(s) 844, 850, 1094
BmeT110I CYCGRG 1 cut(s) 325
BmgT120I GGNCC 4 cut(s) 815, 844, 850, 1094
BmiI GGNNCC 3 cut(s) 355, 636, 715
BmrFI CCNGG 6 cut(s) 207, 313, 326, 327, 358, 848
BmsI GCATC 1 cut(s) 103
BpiI GAAGAC 2 cut(s) 57, 276
Bpu14I TTCGAA 1 cut(s) 1230
BpuMI CCSGG 4 cut(s) 313, 326, 327, 358
Bsa29I ATCGAT 1 cut(s) 956
BsaHI GRCGYC 1 cut(s) 61
BsaJI CCNNGG 9 cut(s) 205, 312, 325, 326, 533, 682, 936, 986, 1170
Bsc4I CCNNNNNNNGG 6 cut(s) 15, 45, 622, 623, 859, 1072
Bse118I RCCGGY 2 cut(s) 374, 856
Bse1I ACTGG 1 cut(s) 715
Bse21I CCTNAGG 1 cut(s) 996
BseBI CCWGG 2 cut(s) 207, 848
BseCI ATCGAT 1 cut(s) 956
BseDI CCNNGG 9 cut(s) 205, 312, 325, 326, 533, 682, 936, 986, 1170
BseGI GGATG 3 cut(s) 322, 543, 1189
BseLI CCNNNNNNNGG 6 cut(s) 15, 45, 622, 623, 859, 1072
BseMII CTCAG 2 cut(s) 746, 1010
BseNI ACTGG 1 cut(s) 715
BseRI GAGGAG 3 cut(s) 173, 176, 557
BseSI GKGCMC 1 cut(s) 637
BseX3I CGGCCG 1 cut(s) 391
BseXI GCAGC 3 cut(s) 65, 481, 969
BseYI CCCAGC 2 cut(s) 645, 1112
Bsh1236I CGCG 2 cut(s) 234, 813
Bsh1285I CGRYCG 2 cut(s) 46, 394
BshFI GGCC 4 cut(s) 311, 393, 816, 1081
BshNI GGYRCC 2 cut(s) 634, 713
BshVI ATCGAT 1 cut(s) 956
BsiEI CGRYCG 2 cut(s) 46, 394
BsiHKAI GWGCWC 1 cut(s) 201
BsiHKCI CYCGRG 1 cut(s) 325
BsiSI CCGG 5 cut(s) 312, 326, 358, 375, 857
BslFI GGGAC 3 cut(s) 399, 640, 1129
BslI CCNNNNNNNGG 6 cut(s) 15, 45, 622, 623, 859, 1072
BsmAI GTCTC 3 cut(s) 180, 735, 799
BsmFI GGGAC 3 cut(s) 399, 640, 1129
BsnI GGCC 4 cut(s) 311, 393, 816, 1081
BsoBI CYCGRG 1 cut(s) 325
Bsp119I TTCGAA 1 cut(s) 1230
Bsp1286I GDGCHC 3 cut(s) 201, 356, 637
Bsp1407I TGTACA 1 cut(s) 180
Bsp143I GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
BspACI CCGC 8 cut(s) 92, 232, 342, 372, 390, 813, 860, 1271
BspANI GGCC 4 cut(s) 311, 393, 816, 1081
BspCNI CTCAG 2 cut(s) 745, 1009
BspDI ATCGAT 1 cut(s) 956
BspFNI CGCG 2 cut(s) 234, 813
BspLI GGNNCC 3 cut(s) 355, 636, 715
BspMI ACCTGC 1 cut(s) 861
BspPI GGATC 3 cut(s) 30, 584, 1256
BspT104I TTCGAA 1 cut(s) 1230
BspT107I GGYRCC 2 cut(s) 634, 713
BsrFI RCCGGY 2 cut(s) 374, 856
BsrGI TGTACA 1 cut(s) 180
BsrI ACTGG 1 cut(s) 715
BssAI RCCGGY 2 cut(s) 374, 856
BssECI CCNNGG 9 cut(s) 205, 312, 325, 326, 533, 682, 936, 986, 1170
BssMI GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
BssNI GRCGYC 1 cut(s) 61
BssSI CACGAG 1 cut(s) 474
BssT1I CCWWGG 3 cut(s) 936, 986, 1170
Bst2BI CACGAG 1 cut(s) 474
Bst2UI CCWGG 2 cut(s) 207, 848
Bst4CI ACNGT 2 cut(s) 561, 683
Bst6I CTCTTC 2 cut(s) 125, 802
BstACI GRCGYC 1 cut(s) 61
BstAUI TGTACA 1 cut(s) 180
BstBI TTCGAA 1 cut(s) 1230
BstC8I GCNNGC 3 cut(s) 376, 858, 1054
BstDEI CTNAG 3 cut(s) 123, 732, 996
BstDSI CCRYGG 1 cut(s) 682
BstF5I GGATG 3 cut(s) 322, 543, 1189
BstFNI CGCG 2 cut(s) 234, 813
BstHHI GCGC 1 cut(s) 236
BstKTI GATC 6 cut(s) 38, 46, 412, 592, 960, 1264
BstMAI GTCTC 3 cut(s) 180, 735, 799
BstMBI GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
BstMCI CGRYCG 2 cut(s) 46, 394
BstMWI GCNNNNNNNGC 4 cut(s) 67, 292, 813, 991
BstNI CCWGG 2 cut(s) 207, 848
BstSCI CCNGG 6 cut(s) 205, 311, 324, 325, 356, 846
BstSFI CTRYAG 1 cut(s) 895
BstSLI GKGCMC 1 cut(s) 637
BstUI CGCG 2 cut(s) 234, 813
BstV1I GCAGC 3 cut(s) 65, 481, 969
BstV2I GAAGAC 2 cut(s) 57, 276
BstX2I RGATCY 1 cut(s) 35
BstYI RGATCY 1 cut(s) 35
BstZI CGGCCG 1 cut(s) 391
Bsu15I ATCGAT 1 cut(s) 956
Bsu36I CCTNAGG 1 cut(s) 996
BsuRI GGCC 4 cut(s) 311, 393, 816, 1081
BsuTUI ATCGAT 1 cut(s) 956
BtgI CCRYGG 1 cut(s) 682
BtsCI GGATG 3 cut(s) 322, 543, 1189
BveI ACCTGC 1 cut(s) 861
Cac8I GCNNGC 3 cut(s) 376, 858, 1054
CaiI CAGNNNCTG 1 cut(s) 710
CfoI GCGC 1 cut(s) 236
Cfr10I RCCGGY 2 cut(s) 374, 856
Cfr13I GGNCC 4 cut(s) 815, 844, 850, 1094
Cfr9I CCCGGG 1 cut(s) 325
ClaI ATCGAT 1 cut(s) 956
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 1 cut(s) 181
CspCI CAANNNNNGTGG 2 cut(s) 484, 519
CviAII CATG 2 cut(s) 379, 1213
CviQI GTAC 1 cut(s) 181
DdeI CTNAG 3 cut(s) 123, 732, 996
DpnI GATC 6 cut(s) 37, 45, 411, 591, 959, 1263
DpnII GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
DraIII CACNNNGTG 1 cut(s) 1133
EaeI YGGCCR 1 cut(s) 391
EagI CGGCCG 1 cut(s) 391
Eam1104I CTCTTC 2 cut(s) 125, 802
EarI CTCTTC 2 cut(s) 125, 802
EclXI CGGCCG 1 cut(s) 391
Eco130I CCWWGG 3 cut(s) 936, 986, 1170
Eco24I GRGCYC 1 cut(s) 356
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 3 cut(s) 844, 850, 1094
Eco52I CGGCCG 1 cut(s) 391
Eco57I CTGAAG 2 cut(s) 167, 1287
Eco81I CCTNAGG 1 cut(s) 996
Eco88I CYCGRG 1 cut(s) 325
EcoO109I RGGNCCY 1 cut(s) 1094
EcoRI GAATTC 1 cut(s) 1232
EcoRII CCWGG 2 cut(s) 205, 846
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 3 cut(s) 936, 986, 1170
EcoT38I GRGCYC 1 cut(s) 356
ErhI CCWWGG 3 cut(s) 936, 986, 1170
FaeI CATG 2 cut(s) 382, 1216
FaqI GGGAC 3 cut(s) 399, 640, 1129
FatI CATG 2 cut(s) 378, 1212
FauI CCCGC 1 cut(s) 853
FauNDI CATATG 1 cut(s) 185
FblI GTMKAC 1 cut(s) 1176
Fnu4HI GCNGC 6 cut(s) 79, 372, 391, 470, 814, 983
FokI GGATG 3 cut(s) 329, 550, 1196
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 6 cut(s) 79, 372, 391, 470, 814, 983
FspBI CTAG 2 cut(s) 26, 917
GlaI GCGC 1 cut(s) 235
GluI GCNGC 6 cut(s) 79, 372, 391, 470, 814, 983
GsaI CCCAGC 2 cut(s) 649, 1116
HaeIII GGCC 4 cut(s) 311, 393, 816, 1081
HapII CCGG 5 cut(s) 312, 326, 358, 375, 857
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 1 cut(s) 236
Hin1I GRCGYC 1 cut(s) 61
Hin1II CATG 2 cut(s) 382, 1216
Hin6I GCGC 1 cut(s) 234
HinP1I GCGC 1 cut(s) 234
HincII GTYRAC 1 cut(s) 1177
HindII GTYRAC 1 cut(s) 1177
HindIII AAGCTT 1 cut(s) 837
HinfI GANTC 2 cut(s) 953, 1117
HpaII CCGG 5 cut(s) 312, 326, 358, 375, 857
HphI GGTGA 4 cut(s) 761, 952, 983, 1159
Hpy166II GTNNAC 5 cut(s) 86, 442, 832, 1177, 1251
Hpy188I TCNGA 4 cut(s) 250, 268, 537, 1047
Hpy188III TCNNGA 7 cut(s) 47, 416, 476, 950, 998, 1259, 1265
Hpy8I GTNNAC 5 cut(s) 86, 442, 832, 1177, 1251
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 3 cut(s) 204, 411, 1268
HpyCH4III ACNGT 2 cut(s) 561, 683
HpyCH4V TGCA 5 cut(s) 286, 566, 704, 1013, 1056
HpyF10VI GCNNNNNNNGC 4 cut(s) 67, 292, 813, 991
HpyF3I CTNAG 3 cut(s) 123, 732, 996
Hsp92I GRCGYC 1 cut(s) 61
Hsp92II CATG 2 cut(s) 382, 1216
HspAI GCGC 1 cut(s) 234
KroI GCCGGC 2 cut(s) 374, 856
KroNI GCCGGC 2 cut(s) 376, 858
Kzo9I GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
LmnI GCTCC 1 cut(s) 359
Lsp1109I GCAGC 3 cut(s) 65, 481, 969
LweI GCATC 1 cut(s) 103
MaeI CTAG 2 cut(s) 26, 917
MaeIII GTNAC 2 cut(s) 188, 706
MalI GATC 6 cut(s) 37, 45, 411, 591, 959, 1263
MboI GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
MflI RGATCY 1 cut(s) 35
MhlI GDGCHC 3 cut(s) 201, 356, 637
MluCI AATT 9 cut(s) 287, 489, 966, 1007, 1070, 1151, 1192, 1208, 1232
MlyI GAGTC 1 cut(s) 1111
MroNI GCCGGC 2 cut(s) 374, 856
MseI TTAA 1 cut(s) 1104
MslI CAYNNNNRTG 3 cut(s) 435, 719, 1018
MspA1I CMGCKG 1 cut(s) 982
MspI CCGG 5 cut(s) 312, 326, 358, 375, 857
MspR9I CCNGG 6 cut(s) 207, 313, 326, 327, 358, 848
MvaI CCWGG 2 cut(s) 207, 848
MvnI CGCG 2 cut(s) 234, 813
MwoI GCNNNNNNNGC 4 cut(s) 67, 292, 813, 991
NaeI GCCGGC 2 cut(s) 376, 858
NciI CCSGG 4 cut(s) 313, 326, 327, 358
NdeI CATATG 1 cut(s) 185
NdeII GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
NgoMIV GCCGGC 2 cut(s) 374, 856
NlaIII CATG 2 cut(s) 382, 1216
NlaIV GGNNCC 3 cut(s) 355, 636, 715
NmuCI GTSAC 1 cut(s) 188
NspV TTCGAA 1 cut(s) 1230
PcsI WCGNNNNNNNCGW 1 cut(s) 79
PdiI GCCGGC 2 cut(s) 376, 858
PfeI GAWTC 1 cut(s) 953
PflMI CCANNNNNTGG 1 cut(s) 15
PfoI TCCNGGA 2 cut(s) 356, 846
PkrI GCNGC 6 cut(s) 80, 373, 392, 471, 815, 984
Ple19I CGATCG 1 cut(s) 46
PleI GAGTC 1 cut(s) 1111
PpsI GAGTC 1 cut(s) 1111
PpuMI RGGWCCY 1 cut(s) 1094
PsiI TTATAA 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 1094
Psp6I CCWGG 2 cut(s) 205, 846
PspFI CCCAGC 2 cut(s) 645, 1112
PspGI CCWGG 2 cut(s) 205, 846
PspN4I GGNNCC 3 cut(s) 355, 636, 715
PspPI GGNCC 4 cut(s) 815, 844, 850, 1094
PspPPI RGGWCCY 1 cut(s) 1094
PstNI CAGNNNCTG 1 cut(s) 710
PsuI RGATCY 1 cut(s) 35
PvuI CGATCG 1 cut(s) 46
PvuII CAGCTG 1 cut(s) 982
RsaI GTAC 1 cut(s) 182
RsaNI GTAC 1 cut(s) 181
RseI CAYNNNNRTG 3 cut(s) 435, 719, 1018
SalI GTCGAC 1 cut(s) 1175
SaqAI TTAA 1 cut(s) 1104
SatI GCNGC 6 cut(s) 79, 372, 391, 470, 814, 983
Sau3AI GATC 6 cut(s) 35, 43, 409, 589, 957, 1261
Sau96I GGNCC 4 cut(s) 815, 844, 850, 1094
SchI GAGTC 1 cut(s) 1111
ScrFI CCNGG 6 cut(s) 207, 313, 326, 327, 358, 848
SduI GDGCHC 3 cut(s) 201, 356, 637
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 895
SfuI TTCGAA 1 cut(s) 1230
SinI GGWCC 3 cut(s) 844, 850, 1094
SmaI CCCGGG 1 cut(s) 327
SmiMI CAYNNNNRTG 3 cut(s) 435, 719, 1018
Sse9I AATT 9 cut(s) 287, 489, 966, 1007, 1070, 1151, 1192, 1208, 1232
SsiI CCGC 8 cut(s) 92, 232, 342, 372, 390, 813, 860, 1271
SspMI CTAG 2 cut(s) 26, 917
StyD4I CCNGG 6 cut(s) 205, 311, 324, 325, 356, 846
StyI CCWWGG 3 cut(s) 936, 986, 1170
TaaI ACNGT 2 cut(s) 561, 683
TaqI TCGA 5 cut(s) 73, 759, 956, 1176, 1230
TasI AATT 9 cut(s) 287, 489, 966, 1007, 1070, 1151, 1192, 1208, 1232
TatI WGTACW 1 cut(s) 180
TauI GCSGC 3 cut(s) 374, 393, 816
TfiI GAWTC 1 cut(s) 953
Tru1I TTAA 1 cut(s) 1104
Tru9I TTAA 1 cut(s) 1104
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 3 cut(s) 78, 469, 982
Tsp45I GTSAC 1 cut(s) 188
TspDTI ATGAA 6 cut(s) 333, 393, 395, 561, 1020, 1201
TspMI CCCGGG 1 cut(s) 325
Van91I CCANNNNNTGG 1 cut(s) 15
VpaK11BI GGWCC 3 cut(s) 844, 850, 1094
XapI RAATTY 2 cut(s) 1007, 1232
XcmI CCANNNNNNNNNTGG 1 cut(s) 780
XmaI CCCGGG 1 cut(s) 325
XmiI GTMKAC 1 cut(s) 1176
XspI CTAG 2 cut(s) 26, 917
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.