FvH4_1g04980

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000213
Physical Location & Seq
Forward (+)
2648207 .. 2649358
1152 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04980.t1

Sequence Viewer

Length: 1152 bp
ATGTCTCCCAAAACCACACTCAACAAAGCCAGCGATGGTGGTCACCGGCTTCGACGCTGCCGTGAATCACCGCCGCGTAAGTCTGACAAGAAGAAGAAGAAGAAGAAGAAGAGAAGTAAGAAGTTGAAGTTGAAGCTGAAGGAGTCGGAGGCCAATAAATCACTGTACATATGTCACATCGAACGCCACCCTGGAGATCGGGTTTCTTATGTTGTCCGTTCCATCAAACTGTCCGATTTGTTGTCGTCGGATTCGGTTGATCATTTGCAATTACGGCAGGTCGGTTATAAGGCCGGAGATGATGAACTCCCCGGTTTTGTGGGTTGCGGTGTGTTGGGCTCCCAAATTGTTTTCGCCGGCGGCATAAAACCCATCTTCGTTTCCCATCCAAACCCTACTTGGCATAGAGATGTGTATGTCTTCGAAACTGAGCCCGACAAGCAGCCTCCTAGTGTAATCCGGAAGATGGATGCCAAATTGCTCCAAGCCAAGTATCTTCCTACGATGATGGAGGTGGGAGGCAAACTGTATGCACTTTCGTATAAGCCGATCTCGGATCCTCCCTCATTTGAGGTATTCGATCCCGAAATGGGGACTTGGTCTGCTCTGCCACAGCCTCCATTCTTGGAGCGAATTCGTCATTCCCCCTTGTCTTATGCAGTTACTGGCACCAAGATGTTTATGTCTCAGATAACAGGTCCTGTCTGCTGCTTCGATGTAGCTCACCCTCACAGAGAATGGAGGTTAGTCCGTTCCATGTGCCAACGCGGCCCTTTTCCTTTTAAGGGCAGAGCTCTGGTCCTGGACCTGCCTGGTGACGATAACAAGAAGATAATGTTTGCCTACGGTTTTGGTCGTTGGTATCTAGGAGTTTATATTATGTTCTTGGATGAAAATCATGAATCTATCACTCGAATTGCTGATTTGAAGCTGCCAATGTTGCCTGAGGAATTTGAATCTGCAAAAAGAGGGTACATCCTCCATATAGGAGGTCAGAAAGCCTGCCTTGTTGCCCCTGAAATGAATCTCCCAGAAGAACGAGTACCTAAATATCATACTCAGGTTGGGAGTCATAAGACAAGGGTGTTGCCATTCCGTTTCGATTTGAAGTTGATATCACCAAGATCGACAAGGACGCCAAGAATTGTTTGA

Protein Analysis

384

Amino Acids

43.66

Weight (kDa)

9.72

Isoelectric Point (pI)

53.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 159 - 265 8e-12 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 288
Acc36I ACCTGC 2 cut(s) 268, 816
AccB1I GGYRCC 1 cut(s) 668
AccII CGCG 2 cut(s) 76, 768
AccIII TCCGGA 1 cut(s) 459
AciI CCGC 5 cut(s) 71, 74, 327, 360, 768
AclWI GGATC 3 cut(s) 551, 564, 575
AcsI RAATTY 2 cut(s) 633, 950
AcuI CTGAAG 1 cut(s) 158
AcyI GRCGYC 1 cut(s) 1136
AfaI GTAC 3 cut(s) 167, 974, 1044
AfiI CCNNNNNNNGG 4 cut(s) 466, 590, 591, 785
AgsI TTSAA 5 cut(s) 127, 133, 928, 956, 1108
AjnI CCWGG 3 cut(s) 190, 801, 811
AluBI AGCT 4 cut(s) 136, 722, 794, 931
AluI AGCT 4 cut(s) 136, 722, 794, 931
Alw21I GWGCWC 1 cut(s) 796
Alw26I GTCTC 2 cut(s) 9, 690
AlwI GGATC 3 cut(s) 551, 564, 575
AlwNI CAGNNNCTG 2 cut(s) 665, 701
Aor13HI TCCGGA 1 cut(s) 459
AoxI GGCC 3 cut(s) 150, 291, 769
ApeKI GCWGC 4 cut(s) 57, 442, 708, 931
ApoI RAATTY 2 cut(s) 633, 950
AspS9I GGNCC 4 cut(s) 698, 770, 799, 805
AsuC2I CCSGG 1 cut(s) 312
AsuHPI GGTGA 5 cut(s) 35, 60, 716, 827, 1110
AsuII TTCGAA 1 cut(s) 423
AvaII GGWCC 3 cut(s) 698, 799, 805
AxyI CCTNAGG 1 cut(s) 945
BamHI GGATCC 1 cut(s) 556
BanI GGYRCC 1 cut(s) 668
BanII GRGCYC 3 cut(s) 341, 435, 796
BarI GAAGNNNNNNTAC 2 cut(s) 1026, 1058
BbsI GAAGAC 1 cut(s) 412
Bbv12I GWGCWC 1 cut(s) 796
BbvI GCAGC 4 cut(s) 44, 454, 695, 918
BccI CCATC 6 cut(s) 29, 230, 380, 393, 460, 502
BceAI ACGGC 2 cut(s) 45, 290
BciT130I CCWGG 3 cut(s) 192, 803, 813
BclI TGATCA 1 cut(s) 259
BcnI CCSGG 1 cut(s) 312
BcoDI GTCTC 2 cut(s) 9, 690
BfaI CTAG 2 cut(s) 450, 866
BfuAI ACCTGC 2 cut(s) 268, 816
BglI GCCNNNNNGGC 1 cut(s) 768
BisI GCNGC 7 cut(s) 58, 74, 361, 443, 709, 769, 932
BlsI GCNGC 7 cut(s) 59, 75, 362, 444, 710, 770, 933
Bme1390I CCNGG 4 cut(s) 192, 312, 803, 813
Bme18I GGWCC 3 cut(s) 698, 799, 805
BmgT120I GGNCC 4 cut(s) 698, 770, 799, 805
BmiI GGNNCC 3 cut(s) 340, 558, 670
BmrFI CCNGG 4 cut(s) 192, 312, 803, 813
BmsI GCATC 1 cut(s) 460
BpiI GAAGAC 1 cut(s) 412
BpmI CTGGAG 1 cut(s) 213
Bpu14I TTCGAA 1 cut(s) 423
BpuMI CCSGG 1 cut(s) 312
BsaBI GATNNNNATC 1 cut(s) 894
BsaHI GRCGYC 1 cut(s) 1136
BsaJI CCNNGG 2 cut(s) 190, 310
BsaWI WCCGGW 1 cut(s) 459
BsaXI ACNNNNNCTCC 2 cut(s) 186, 216
Bsc4I CCNNNNNNNGG 4 cut(s) 466, 590, 591, 785
Bse118I RCCGGY 2 cut(s) 45, 356
Bse1I ACTGG 1 cut(s) 670
Bse21I CCTNAGG 1 cut(s) 945
Bse8I GATNNNNATC 1 cut(s) 894
BseAI TCCGGA 1 cut(s) 459
BseBI CCWGG 3 cut(s) 192, 803, 813
BseDI CCNNGG 2 cut(s) 190, 310
BseGI GGATG 4 cut(s) 385, 475, 895, 975
BseJI GATNNNNATC 1 cut(s) 894
BseLI CCNNNNNNNGG 4 cut(s) 466, 590, 591, 785
BseMII CTCAG 4 cut(s) 420, 701, 936, 1073
BseNI ACTGG 1 cut(s) 670
BseXI GCAGC 4 cut(s) 44, 454, 695, 918
Bsh1236I CGCG 2 cut(s) 76, 768
BshFI GGCC 3 cut(s) 152, 293, 771
BshNI GGYRCC 1 cut(s) 668
BsiHKAI GWGCWC 1 cut(s) 796
BsiSI CCGG 5 cut(s) 46, 294, 312, 357, 460
BslFI GGGAC 1 cut(s) 607
BslI CCNNNNNNNGG 4 cut(s) 466, 590, 591, 785
BsmAI GTCTC 2 cut(s) 9, 690
BsmFI GGGAC 1 cut(s) 607
BsnI GGCC 3 cut(s) 152, 293, 771
Bsp119I TTCGAA 1 cut(s) 423
Bsp1286I GDGCHC 3 cut(s) 341, 435, 796
Bsp13I TCCGGA 1 cut(s) 459
Bsp1407I TGTACA 1 cut(s) 165
Bsp143I GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
BspACI CCGC 5 cut(s) 71, 74, 327, 360, 768
BspANI GGCC 3 cut(s) 152, 293, 771
BspCNI CTCAG 4 cut(s) 421, 700, 937, 1072
BspEI TCCGGA 1 cut(s) 459
BspFNI CGCG 2 cut(s) 76, 768
BspHI TCATGA 1 cut(s) 898
BspLI GGNNCC 3 cut(s) 340, 558, 670
BspMI ACCTGC 2 cut(s) 268, 816
BspPI GGATC 3 cut(s) 551, 564, 575
BspT104I TTCGAA 1 cut(s) 423
BspT107I GGYRCC 1 cut(s) 668
BsrFI RCCGGY 2 cut(s) 45, 356
BsrGI TGTACA 1 cut(s) 165
BsrI ACTGG 1 cut(s) 670
BssAI RCCGGY 2 cut(s) 45, 356
BssECI CCNNGG 2 cut(s) 190, 310
BssMI GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
BssNI GRCGYC 1 cut(s) 1136
Bst2UI CCWGG 3 cut(s) 192, 803, 813
Bst4CI ACNGT 4 cut(s) 165, 231, 528, 848
Bst6I CTCTTC 1 cut(s) 104
BstACI GRCGYC 1 cut(s) 1136
BstAUI TGTACA 1 cut(s) 165
BstBI TTCGAA 1 cut(s) 423
BstC8I GCNNGC 3 cut(s) 31, 358, 1003
BstDEI CTNAG 4 cut(s) 429, 687, 945, 1059
BstEII GGTNACC 1 cut(s) 41
BstF5I GGATG 4 cut(s) 385, 475, 895, 975
BstFNI CGCG 2 cut(s) 76, 768
BstKTI GATC 6 cut(s) 199, 262, 552, 559, 583, 1127
BstMAI GTCTC 2 cut(s) 9, 690
BstMBI GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
BstMWI GCNNNNNNNGC 4 cut(s) 274, 439, 768, 940
BstNI CCWGG 3 cut(s) 192, 803, 813
BstPI GGTNACC 1 cut(s) 41
BstSCI CCNGG 4 cut(s) 190, 310, 801, 811
BstUI CGCG 2 cut(s) 76, 768
BstV1I GCAGC 4 cut(s) 44, 454, 695, 918
BstV2I GAAGAC 1 cut(s) 412
BstX2I RGATCY 1 cut(s) 556
BstYI RGATCY 1 cut(s) 556
Bsu36I CCTNAGG 1 cut(s) 945
BsuRI GGCC 3 cut(s) 152, 293, 771
BtgZI GCGATG 1 cut(s) 48
BtsCI GGATG 4 cut(s) 385, 475, 895, 975
BtsIMutI CAGTG 1 cut(s) 161
BveI ACCTGC 2 cut(s) 268, 816
Cac8I GCNNGC 3 cut(s) 31, 358, 1003
CaiI CAGNNNCTG 2 cut(s) 665, 701
CciI TCATGA 1 cut(s) 898
Cfr10I RCCGGY 2 cut(s) 45, 356
Cfr13I GGNCC 4 cut(s) 698, 770, 799, 805
CseI GACGC 2 cut(s) 63, 1144
Csp6I GTAC 3 cut(s) 166, 973, 1043
CviAII CATG 2 cut(s) 757, 899
CviQI GTAC 3 cut(s) 166, 973, 1043
DdeI CTNAG 4 cut(s) 429, 687, 945, 1059
DpnI GATC 6 cut(s) 198, 261, 551, 558, 582, 1126
DpnII GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
Eam1104I CTCTTC 1 cut(s) 104
EarI CTCTTC 1 cut(s) 104
Ecl136II GAGCTC 1 cut(s) 794
Eco24I GRGCYC 3 cut(s) 341, 435, 796
Eco32I GATATC 1 cut(s) 1116
Eco47I GGWCC 3 cut(s) 698, 799, 805
Eco53kI GAGCTC 1 cut(s) 794
Eco57I CTGAAG 1 cut(s) 158
Eco81I CCTNAGG 1 cut(s) 945
Eco91I GGTNACC 1 cut(s) 41
EcoICRI GAGCTC 1 cut(s) 794
EcoO109I RGGNCCY 1 cut(s) 698
EcoO65I GGTNACC 1 cut(s) 41
EcoRI GAATTC 1 cut(s) 633
EcoRII CCWGG 3 cut(s) 190, 801, 811
EcoRV GATATC 1 cut(s) 1116
EcoT38I GRGCYC 3 cut(s) 341, 435, 796
FaeI CATG 2 cut(s) 760, 902
FalI AAGNNNNNCTT 2 cut(s) 990, 1022
FaqI GGGAC 1 cut(s) 607
FatI CATG 2 cut(s) 756, 898
FauNDI CATATG 1 cut(s) 170
FbaI TGATCA 1 cut(s) 259
Fnu4HI GCNGC 7 cut(s) 58, 74, 361, 443, 709, 769, 932
FokI GGATG 4 cut(s) 372, 482, 902, 962
FriOI GRGCYC 3 cut(s) 341, 435, 796
Fsp4HI GCNGC 7 cut(s) 58, 74, 361, 443, 709, 769, 932
FspBI CTAG 2 cut(s) 450, 866
GluI GCNGC 7 cut(s) 58, 74, 361, 443, 709, 769, 932
GsuI CTGGAG 1 cut(s) 213
HaeIII GGCC 3 cut(s) 152, 293, 771
HapII CCGG 5 cut(s) 46, 294, 312, 357, 460
HgaI GACGC 2 cut(s) 63, 1144
Hin1I GRCGYC 1 cut(s) 1136
Hin1II CATG 2 cut(s) 760, 902
HinfI GANTC 7 cut(s) 65, 143, 251, 902, 956, 1024, 1069
HpaII CCGG 5 cut(s) 46, 294, 312, 357, 460
HphI GGTGA 5 cut(s) 35, 60, 716, 827, 1110
Hpy188I TCNGA 7 cut(s) 85, 148, 235, 250, 556, 690, 996
Hpy188III TCNNGA 3 cut(s) 460, 584, 899
Hpy99I CGWCG 2 cut(s) 57, 250
HpyAV CCTTC 1 cut(s) 133
HpyCH4III ACNGT 4 cut(s) 165, 231, 528, 848
HpyCH4V TGCA 4 cut(s) 268, 533, 659, 962
HpyF10VI GCNNNNNNNGC 4 cut(s) 274, 439, 768, 940
HpyF3I CTNAG 4 cut(s) 429, 687, 945, 1059
Hsp92I GRCGYC 1 cut(s) 1136
Hsp92II CATG 2 cut(s) 760, 902
Kpn2I TCCGGA 1 cut(s) 459
KroI GCCGGC 1 cut(s) 356
KroNI GCCGGC 1 cut(s) 358
Ksp22I TGATCA 1 cut(s) 259
Kzo9I GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
LmnI GCTCC 3 cut(s) 344, 486, 628
Lsp1109I GCAGC 4 cut(s) 44, 454, 695, 918
LweI GCATC 1 cut(s) 460
MaeI CTAG 2 cut(s) 450, 866
MaeIII GTNAC 4 cut(s) 41, 173, 661, 815
MalI GATC 6 cut(s) 198, 261, 551, 558, 582, 1126
MboI GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
MflI RGATCY 1 cut(s) 556
MhlI GDGCHC 3 cut(s) 341, 435, 796
MluCI AATT 7 cut(s) 269, 345, 476, 633, 915, 950, 1143
MlyI GAGTC 2 cut(s) 152, 1078
MmeI TCCRAC 2 cut(s) 126, 228
MreI CGCCGGCG 1 cut(s) 356
MroI TCCGGA 1 cut(s) 459
MroNI GCCGGC 1 cut(s) 356
MseI TTAA 1 cut(s) 783
MslI CAYNNNNRTG 2 cut(s) 408, 674
MspI CCGG 5 cut(s) 46, 294, 312, 357, 460
MspR9I CCNGG 4 cut(s) 192, 312, 803, 813
MvaI CCWGG 3 cut(s) 192, 803, 813
MvnI CGCG 2 cut(s) 76, 768
MwoI GCNNNNNNNGC 4 cut(s) 274, 439, 768, 940
NaeI GCCGGC 1 cut(s) 358
NciI CCSGG 1 cut(s) 312
NdeI CATATG 1 cut(s) 170
NdeII GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
NgoMIV GCCGGC 1 cut(s) 356
NlaIII CATG 2 cut(s) 760, 902
NlaIV GGNNCC 3 cut(s) 340, 558, 670
NmuCI GTSAC 3 cut(s) 41, 173, 815
NspV TTCGAA 1 cut(s) 423
PagI TCATGA 1 cut(s) 898
PcsI WCGNNNNNNNCGW 2 cut(s) 58, 545
PdiI GCCGGC 1 cut(s) 358
PfeI GAWTC 5 cut(s) 65, 251, 902, 956, 1024
PflFI GACNNNGTC 1 cut(s) 598
PfoI TCCNGGA 1 cut(s) 801
PkrI GCNGC 7 cut(s) 59, 75, 362, 444, 710, 770, 933
PleI GAGTC 2 cut(s) 151, 1077
PpsI GAGTC 2 cut(s) 151, 1077
PpuMI RGGWCCY 1 cut(s) 698
PsiI TTATAA 1 cut(s) 288
Psp124BI GAGCTC 1 cut(s) 796
Psp5II RGGWCCY 1 cut(s) 698
Psp6I CCWGG 3 cut(s) 190, 801, 811
PspEI GGTNACC 1 cut(s) 41
PspGI CCWGG 3 cut(s) 190, 801, 811
PspN4I GGNNCC 3 cut(s) 340, 558, 670
PspPI GGNCC 4 cut(s) 698, 770, 799, 805
PspPPI RGGWCCY 1 cut(s) 698
PstNI CAGNNNCTG 2 cut(s) 665, 701
PsuI RGATCY 1 cut(s) 556
PsyI GACNNNGTC 1 cut(s) 598
RsaI GTAC 3 cut(s) 167, 974, 1044
RsaNI GTAC 3 cut(s) 166, 973, 1043
RseI CAYNNNNRTG 2 cut(s) 408, 674
SacI GAGCTC 1 cut(s) 796
SaqAI TTAA 1 cut(s) 783
SatI GCNGC 7 cut(s) 58, 74, 361, 443, 709, 769, 932
Sau3AI GATC 6 cut(s) 196, 259, 549, 556, 580, 1124
Sau96I GGNCC 4 cut(s) 698, 770, 799, 805
SchI GAGTC 2 cut(s) 152, 1078
ScrFI CCNGG 4 cut(s) 192, 312, 803, 813
SduI GDGCHC 3 cut(s) 341, 435, 796
SfaNI GCATC 1 cut(s) 460
SfuI TTCGAA 1 cut(s) 423
SgrAI CRCCGGYG 1 cut(s) 356
SinI GGWCC 3 cut(s) 698, 799, 805
SmiMI CAYNNNNRTG 2 cut(s) 408, 674
Sse9I AATT 7 cut(s) 269, 345, 476, 633, 915, 950, 1143
SsiI CCGC 5 cut(s) 71, 74, 327, 360, 768
SspMI CTAG 2 cut(s) 450, 866
SstI GAGCTC 1 cut(s) 796
StyD4I CCNGG 4 cut(s) 190, 310, 801, 811
TaaI ACNGT 4 cut(s) 165, 231, 528, 848
TaqI TCGA 8 cut(s) 52, 180, 423, 579, 714, 913, 1101, 1127
TasI AATT 7 cut(s) 269, 345, 476, 633, 915, 950, 1143
TatI WGTACW 1 cut(s) 165
TauI GCSGC 3 cut(s) 76, 363, 771
TfiI GAWTC 5 cut(s) 65, 251, 902, 956, 1024
Tru1I TTAA 1 cut(s) 783
Tru9I TTAA 1 cut(s) 783
TscAI CASTG 1 cut(s) 168
TseFI GTSAC 3 cut(s) 41, 173, 815
TseI GCWGC 4 cut(s) 57, 442, 708, 931
Tsp45I GTSAC 3 cut(s) 41, 173, 815
TspDTI ATGAA 4 cut(s) 318, 906, 915, 1037
TspGWI ACGGA 3 cut(s) 206, 740, 1085
TspRI CASTG 1 cut(s) 168
Tth111I GACNNNGTC 1 cut(s) 598
VpaK11BI GGWCC 3 cut(s) 698, 799, 805
XapI RAATTY 2 cut(s) 633, 950
XcmI CCANNNNNNNNNTGG 1 cut(s) 396
XspI CTAG 2 cut(s) 450, 866
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.