Rmu_sc0008968.1_g000008

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0008968.1
OG0000213
Physical Location & Seq
Reverse (-)
29946 .. 31283
1338 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0008968.1_g000008.1.cds

Sequence Viewer

Length: 1338 bp
atggcccccagaaaacctcataacctagcctccgccaccagcaatggcgaagaggagacgcaccatcatcggcttcgacctagcagtgtacatcatgggcagaagtctcatgagcataatatgaagaagaagaagaagaagaagaagaaggagaagaagaggaaaacccgagggacagagaaggtgaagaagaagaagaaactgaaattgaatgaggtggagggtaataagtcactctatctgtgcaccattgaataccaagagggagaacgagcggcttatgctgtgcggtgcattaaactatcagatctcttatgctcatcagatgatgatccactgcaattgcgccaagtggcttatgccgctggggatcatctccccgcttccatcggtggcggtgttttcggctcccagattattttcgccggtggcgtgaaacccagcttcccaatcatttcattacttcgttccgacttagtttggcatagagatgtttatgccttcgaaactgaccccaacaagcagcagcagcagcagcctcatgatattaccaagatggatgccactctactacaagccaagttttaccctctaatcgtggagcttggcgggaaactctacgctctttccggtttgcgggtctccgatccgccttcatttgaggtatttgaccccaatgtgggcaagtgggcagctttgcctgaacctccattcttccaaattggctctccatattgggaagatgccgaattctcttatgcaattacgggcaccaagatctttgcctcccatgaaaaatgtccagtgttctgctttgacgtcgcccacccagacagagaatggagactagtctctactatgtgccaacgccgcccttttcccttctggcacgaaactctagttcttgacctgccggaggatgacaagaagaagttactgtttgcctatactaatgatcagcgtctaggagtttatattctgtccttggatgaaaatcaagagtctatcacacaaattggtgattggaagatcccttcgtggccttatgaatttggttacttatcagcatttagtattgtgcacgtaggaggtcagaaagcatgctttgttatcacccggttgggcgtcccaagtgaatacaaagctgaatatgagcctgggactcataagacctggggaattgccataccatttcaatttgaccttgatatcaccaaggtggacaaggacaagaagaattgtttcaccctccaattcatgtctcttcgcatcttcgaataccataccaacccatccagttttccagaacctggaccgcttggttgctttgtgctgtga

Protein Analysis

445

Amino Acids

50.74

Weight (kDa)

8.63

Isoelectric Point (pI)

43.55

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 822
Acc36I ACCTGC 1 cut(s) 918
AccB1I GGYRCC 1 cut(s) 770
AccB7I CCANNNNNTGG 1 cut(s) 1310
AccBSI CCGCTC 1 cut(s) 275
AclWI GGATC 4 cut(s) 326, 378, 641, 1024
AcsI RAATTY 2 cut(s) 749, 1049
AcyI GRCGYC 2 cut(s) 819, 1125
AfaI GTAC 1 cut(s) 90
AfiI CCNNNNNNNGG 5 cut(s) 636, 679, 680, 916, 1310
AgsI TTSAA 3 cut(s) 211, 254, 1196
AhlI ACTAGT 1 cut(s) 847
AjnI CCWGG 3 cut(s) 1156, 1172, 1309
AleI CACNNNNGTG 1 cut(s) 1217
AluBI AGCT 4 cut(s) 444, 604, 695, 1145
AluI AGCT 4 cut(s) 444, 604, 695, 1145
Alw21I GWGCWC 2 cut(s) 248, 1083
Alw26I GTCTC 6 cut(s) 50, 111, 646, 838, 856, 1266
Alw44I GTGCAC 2 cut(s) 244, 1079
AlwI GGATC 4 cut(s) 326, 378, 641, 1024
AlwNI CAGNNNCTG 1 cut(s) 1310
Ama87I CYCGRG 1 cut(s) 168
AoxI GGCC 2 cut(s) 3, 1040
ApaLI GTGCAC 2 cut(s) 244, 1079
ApeKI GCWGC 6 cut(s) 523, 526, 529, 532, 535, 692
ApoI RAATTY 2 cut(s) 749, 1049
Asp700I GAANNNNTTC 1 cut(s) 1241
AspLEI GCGC 1 cut(s) 348
AspS9I GGNCC 2 cut(s) 4, 1313
AsuC2I CCSGG 1 cut(s) 1117
AsuHPI GGTGA 5 cut(s) 196, 1031, 1105, 1204, 1237
AsuII TTCGAA 2 cut(s) 504, 1275
AvaI CYCGRG 1 cut(s) 168
AvaII GGWCC 1 cut(s) 1313
BaeGI GKGCMC 3 cut(s) 248, 773, 1083
BanI GGYRCC 1 cut(s) 770
Bbv12I GWGCWC 2 cut(s) 248, 1083
BbvI GCAGC 6 cut(s) 535, 538, 541, 544, 547, 704
BccI CCATC 4 cut(s) 72, 395, 550, 1300
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 3 cut(s) 1158, 1174, 1311
BclI TGATCA 1 cut(s) 955
BcnI CCSGG 1 cut(s) 1117
BcoDI GTCTC 6 cut(s) 50, 111, 646, 838, 856, 1266
BcuI ACTAGT 1 cut(s) 847
BfaI CTAG 5 cut(s) 26, 81, 848, 899, 965
BfuAI ACCTGC 1 cut(s) 918
BglII AGATCT 2 cut(s) 307, 777
BisI GCNGC 9 cut(s) 276, 363, 524, 527, 530, 533, 536, 693, 871
BlsI GCNGC 9 cut(s) 277, 364, 525, 528, 531, 534, 537, 694, 872
Bme1390I CCNGG 4 cut(s) 1117, 1158, 1174, 1311
Bme18I GGWCC 1 cut(s) 1313
BmeT110I CYCGRG 1 cut(s) 168
BmgT120I GGNCC 2 cut(s) 4, 1313
BmiI GGNNCC 3 cut(s) 6, 409, 772
BmrFI CCNGG 4 cut(s) 1117, 1158, 1174, 1311
BmsI GCATC 3 cut(s) 550, 733, 1278
Bpu14I TTCGAA 2 cut(s) 504, 1275
BpuMI CCSGG 1 cut(s) 1117
BsaAI YACGTR 1 cut(s) 1084
BsaBI GATNNNNATC 2 cut(s) 330, 993
BsaHI GRCGYC 2 cut(s) 819, 1125
BsaI GGTCTC 1 cut(s) 646
BsaJI CCNNGG 5 cut(s) 169, 984, 1157, 1173, 1215
BsaWI WCCGGW 1 cut(s) 629
BsaXI ACNNNNNCTCC 2 cut(s) 14, 44
Bsc4I CCNNNNNNNGG 5 cut(s) 636, 679, 680, 916, 1310
Bse118I RCCGGY 1 cut(s) 425
Bse1I ACTGG 2 cut(s) 803, 1296
Bse3DI GCAATG 1 cut(s) 49
Bse8I GATNNNNATC 2 cut(s) 330, 993
BseBI CCWGG 3 cut(s) 1158, 1174, 1311
BseDI CCNNGG 5 cut(s) 169, 984, 1157, 1173, 1215
BseGI GGATG 4 cut(s) 565, 925, 994, 1292
BseJI GATNNNNATC 2 cut(s) 330, 993
BseLI CCNNNNNNNGG 5 cut(s) 636, 679, 680, 916, 1310
BseMI GCAATG 1 cut(s) 49
BseNI ACTGG 2 cut(s) 803, 1296
BseRI GAGGAG 1 cut(s) 68
BseSI GKGCMC 3 cut(s) 248, 773, 1083
BseXI GCAGC 6 cut(s) 535, 538, 541, 544, 547, 704
BseYI CCCAGC 2 cut(s) 365, 440
BshFI GGCC 2 cut(s) 5, 1042
BshNI GGYRCC 1 cut(s) 770
BsiHKAI GWGCWC 2 cut(s) 248, 1083
BsiHKCI CYCGRG 1 cut(s) 168
BsiSI CCGG 4 cut(s) 426, 630, 914, 1117
BslFI GGGAC 3 cut(s) 187, 1112, 1174
BslI CCNNNNNNNGG 5 cut(s) 636, 679, 680, 916, 1310
BsmAI GTCTC 6 cut(s) 50, 111, 646, 838, 856, 1266
BsmBI CGTCTC 1 cut(s) 50
BsmFI GGGAC 3 cut(s) 187, 1112, 1174
BsnI GGCC 2 cut(s) 5, 1042
Bso31I GGTCTC 1 cut(s) 646
BsoBI CYCGRG 1 cut(s) 168
Bsp119I TTCGAA 2 cut(s) 504, 1275
Bsp1286I GDGCHC 3 cut(s) 248, 773, 1083
Bsp1407I TGTACA 1 cut(s) 88
Bsp143I GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
BspANI GGCC 2 cut(s) 5, 1042
BspHI TCATGA 2 cut(s) 109, 541
BspLI GGNNCC 3 cut(s) 6, 409, 772
BspMI ACCTGC 1 cut(s) 918
BspPI GGATC 4 cut(s) 326, 378, 641, 1024
BspT104I TTCGAA 2 cut(s) 504, 1275
BspT107I GGYRCC 1 cut(s) 770
BspTNI GGTCTC 1 cut(s) 646
BsrBI CCGCTC 1 cut(s) 275
BsrDI GCAATG 1 cut(s) 49
BsrFI RCCGGY 1 cut(s) 425
BsrGI TGTACA 1 cut(s) 88
BsrI ACTGG 2 cut(s) 803, 1296
BssAI RCCGGY 1 cut(s) 425
BssECI CCNNGG 5 cut(s) 169, 984, 1157, 1173, 1215
BssMI GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
BssNI GRCGYC 2 cut(s) 819, 1125
BssT1I CCWWGG 2 cut(s) 984, 1215
Bst2UI CCWGG 3 cut(s) 1158, 1174, 1311
Bst4CI ACNGT 1 cut(s) 939
Bst6I CTCTTC 3 cut(s) 45, 152, 1269
BstACI GRCGYC 2 cut(s) 819, 1125
BstAUI TGTACA 1 cut(s) 88
BstBAI YACGTR 1 cut(s) 1084
BstBI TTCGAA 2 cut(s) 504, 1275
BstC8I GCNNGC 1 cut(s) 1102
BstDEI CTNAG 1 cut(s) 475
BstENI CCTNNNNNAGG 1 cut(s) 914
BstF5I GGATG 4 cut(s) 565, 925, 994, 1292
BstHHI GCGC 1 cut(s) 348
BstKTI GATC 7 cut(s) 310, 334, 373, 649, 780, 958, 1032
BstMAI GTCTC 6 cut(s) 50, 111, 646, 838, 856, 1266
BstMBI GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
BstMWI GCNNNNNNNGC 6 cut(s) 281, 362, 529, 532, 535, 870
BstNI CCWGG 3 cut(s) 1158, 1174, 1311
BstNSI RCATGY 1 cut(s) 1104
BstSCI CCNGG 4 cut(s) 1115, 1156, 1172, 1309
BstSLI GKGCMC 3 cut(s) 248, 773, 1083
BstV1I GCAGC 6 cut(s) 535, 538, 541, 544, 547, 704
BstX2I RGATCY 3 cut(s) 307, 777, 1029
BstYI RGATCY 3 cut(s) 307, 777, 1029
BsuRI GGCC 2 cut(s) 5, 1042
BtsCI GGATG 4 cut(s) 565, 925, 994, 1292
BtsI GCAGTG 2 cut(s) 91, 335
BtsIMutI CAGTG 3 cut(s) 91, 335, 810
BveI ACCTGC 1 cut(s) 918
Cac8I GCNNGC 1 cut(s) 1102
CaiI CAGNNNCTG 1 cut(s) 1310
CciI TCATGA 2 cut(s) 109, 541
CfoI GCGC 1 cut(s) 348
Cfr10I RCCGGY 1 cut(s) 425
Cfr13I GGNCC 2 cut(s) 4, 1313
CseI GACGC 3 cut(s) 67, 950, 1114
Csp6I GTAC 1 cut(s) 89
CspCI CAANNNNNGTGG 2 cut(s) 324, 359
CviAII CATG 6 cut(s) 95, 110, 542, 791, 1101, 1258
CviQI GTAC 1 cut(s) 89
DdeI CTNAG 1 cut(s) 475
DpnI GATC 7 cut(s) 309, 333, 372, 648, 779, 957, 1031
DpnII GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
Eam1104I CTCTTC 3 cut(s) 45, 152, 1269
EarI CTCTTC 3 cut(s) 45, 152, 1269
EciI GGCGGA 2 cut(s) 22, 639
Eco130I CCWWGG 2 cut(s) 984, 1215
Eco31I GGTCTC 1 cut(s) 646
Eco32I GATATC 1 cut(s) 1210
Eco47I GGWCC 1 cut(s) 1313
Eco88I CYCGRG 1 cut(s) 168
EcoNI CCTNNNNNAGG 1 cut(s) 914
EcoRI GAATTC 1 cut(s) 749
EcoRII CCWGG 3 cut(s) 1156, 1172, 1309
EcoRV GATATC 1 cut(s) 1210
EcoT14I CCWWGG 2 cut(s) 984, 1215
ErhI CCWWGG 2 cut(s) 984, 1215
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 6 cut(s) 98, 113, 545, 794, 1104, 1261
FaqI GGGAC 3 cut(s) 187, 1112, 1174
FatI CATG 6 cut(s) 94, 109, 541, 790, 1100, 1257
FauI CCCGC 3 cut(s) 388, 602, 630
FbaI TGATCA 1 cut(s) 955
Fnu4HI GCNGC 9 cut(s) 276, 363, 524, 527, 530, 533, 536, 693, 871
FokI GGATG 4 cut(s) 572, 932, 1001, 1279
Fsp4HI GCNGC 9 cut(s) 276, 363, 524, 527, 530, 533, 536, 693, 871
FspBI CTAG 5 cut(s) 26, 81, 848, 899, 965
GlaI GCGC 1 cut(s) 347
GluI GCNGC 9 cut(s) 276, 363, 524, 527, 530, 533, 536, 693, 871
GsaI CCCAGC 2 cut(s) 369, 444
HaeIII GGCC 2 cut(s) 5, 1042
HapII CCGG 4 cut(s) 426, 630, 914, 1117
HgaI GACGC 3 cut(s) 67, 950, 1114
HhaI GCGC 1 cut(s) 348
Hin1I GRCGYC 2 cut(s) 819, 1125
Hin1II CATG 6 cut(s) 98, 113, 545, 794, 1104, 1261
Hin6I GCGC 1 cut(s) 346
HinP1I GCGC 1 cut(s) 346
HinfI GANTC 2 cut(s) 1001, 1162
HpaII CCGG 4 cut(s) 426, 630, 914, 1117
HphI GGTGA 5 cut(s) 196, 1031, 1105, 1204, 1237
Hpy166II GTNNAC 4 cut(s) 89, 246, 1081, 1222
Hpy188I TCNGA 5 cut(s) 307, 325, 472, 646, 1095
Hpy188III TCNNGA 5 cut(s) 110, 542, 905, 998, 1304
Hpy8I GTNNAC 4 cut(s) 89, 246, 1081, 1222
Hpy99I CGWCG 1 cut(s) 824
HpyAV CCTTC 6 cut(s) 142, 175, 511, 663, 892, 1044
HpyCH4III ACNGT 1 cut(s) 939
HpyCH4IV ACGT 2 cut(s) 819, 1083
HpyCH4V TGCA 5 cut(s) 246, 294, 340, 761, 1081
HpyF10VI GCNNNNNNNGC 6 cut(s) 281, 362, 529, 532, 535, 870
HpyF3I CTNAG 1 cut(s) 475
HpySE526I ACGT 2 cut(s) 819, 1083
Hsp92I GRCGYC 2 cut(s) 819, 1125
Hsp92II CATG 6 cut(s) 98, 113, 545, 794, 1104, 1261
HspAI GCGC 1 cut(s) 346
Ksp22I TGATCA 1 cut(s) 955
Kzo9I GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
LmnI GCTCC 2 cut(s) 413, 601
Lsp1109I GCAGC 6 cut(s) 535, 538, 541, 544, 547, 704
LweI GCATC 3 cut(s) 550, 733, 1278
MaeI CTAG 5 cut(s) 26, 81, 848, 899, 965
MaeII ACGT 2 cut(s) 819, 1083
MaeIII GTNAC 3 cut(s) 231, 933, 1055
MalI GATC 7 cut(s) 309, 333, 372, 648, 779, 957, 1031
MbiI CCGCTC 1 cut(s) 275
MboI GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
MfeI CAATTG 1 cut(s) 341
MflI RGATCY 3 cut(s) 307, 777, 1029
MhlI GDGCHC 3 cut(s) 248, 773, 1083
MlyI GAGTC 2 cut(s) 1010, 1156
MmeI TCCRAC 1 cut(s) 495
MroXI GAANNNNTTC 1 cut(s) 1241
MseI TTAA 1 cut(s) 297
MslI CAYNNNNRTG 2 cut(s) 489, 1217
MspA1I CMGCKG 1 cut(s) 365
MspI CCGG 4 cut(s) 426, 630, 914, 1117
MspR9I CCNGG 4 cut(s) 1117, 1158, 1174, 1311
MunI CAATTG 1 cut(s) 341
MvaI CCWGG 3 cut(s) 1158, 1174, 1311
MwoI GCNNNNNNNGC 6 cut(s) 281, 362, 529, 532, 535, 870
NciI CCSGG 1 cut(s) 1117
NdeII GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
NlaIII CATG 6 cut(s) 98, 113, 545, 794, 1104, 1261
NlaIV GGNNCC 3 cut(s) 6, 409, 772
NmuCI GTSAC 1 cut(s) 231
NspI RCATGY 1 cut(s) 1104
NspV TTCGAA 2 cut(s) 504, 1275
OliI CACNNNNGTG 1 cut(s) 1217
PaeI GCATGC 1 cut(s) 1104
PagI TCATGA 2 cut(s) 109, 541
PcsI WCGNNNNNNNCGW 1 cut(s) 429
PdmI GAANNNNTTC 1 cut(s) 1241
PflMI CCANNNNNTGG 1 cut(s) 1310
PkrI GCNGC 9 cut(s) 277, 364, 525, 528, 531, 534, 537, 694, 872
PleI GAGTC 2 cut(s) 1009, 1156
PpsI GAGTC 2 cut(s) 1009, 1156
Ppu21I YACGTR 1 cut(s) 1084
Psp6I CCWGG 3 cut(s) 1156, 1172, 1309
PspFI CCCAGC 2 cut(s) 365, 440
PspGI CCWGG 3 cut(s) 1156, 1172, 1309
PspN4I GGNNCC 3 cut(s) 6, 409, 772
PspPI GGNCC 2 cut(s) 4, 1313
PstNI CAGNNNCTG 1 cut(s) 1310
PsuI RGATCY 3 cut(s) 307, 777, 1029
RsaI GTAC 1 cut(s) 90
RsaNI GTAC 1 cut(s) 89
RseI CAYNNNNRTG 2 cut(s) 489, 1217
SaqAI TTAA 1 cut(s) 297
SatI GCNGC 9 cut(s) 276, 363, 524, 527, 530, 533, 536, 693, 871
Sau3AI GATC 7 cut(s) 307, 331, 370, 646, 777, 955, 1029
Sau96I GGNCC 2 cut(s) 4, 1313
SchI GAGTC 2 cut(s) 1010, 1156
ScrFI CCNGG 4 cut(s) 1117, 1158, 1174, 1311
SduI GDGCHC 3 cut(s) 248, 773, 1083
SfaNI GCATC 3 cut(s) 550, 733, 1278
SfuI TTCGAA 2 cut(s) 504, 1275
SgrAI CRCCGGYG 1 cut(s) 425
SinI GGWCC 1 cut(s) 1313
SmiMI CAYNNNNRTG 2 cut(s) 489, 1217
SpeI ACTAGT 1 cut(s) 847
SphI GCATGC 1 cut(s) 1104
SspMI CTAG 5 cut(s) 26, 81, 848, 899, 965
StyD4I CCNGG 4 cut(s) 1115, 1156, 1172, 1309
StyI CCWWGG 2 cut(s) 984, 1215
TaaI ACNGT 1 cut(s) 939
TaiI ACGT 2 cut(s) 822, 1086
TaqI TCGA 3 cut(s) 76, 504, 1275
TatI WGTACW 1 cut(s) 88
TauI GCSGC 3 cut(s) 278, 365, 873
Tru1I TTAA 1 cut(s) 297
Tru9I TTAA 1 cut(s) 297
TscAI CASTG 3 cut(s) 91, 342, 810
TseFI GTSAC 1 cut(s) 231
TseI GCWGC 6 cut(s) 523, 526, 529, 532, 535, 692
Tsp45I GTSAC 1 cut(s) 231
TspDTI ATGAA 7 cut(s) 137, 447, 645, 807, 1005, 1062, 1246
TspRI CASTG 3 cut(s) 91, 342, 810
Van91I CCANNNNNTGG 1 cut(s) 1310
VneI GTGCAC 2 cut(s) 244, 1079
VpaK11BI GGWCC 1 cut(s) 1313
XagI CCTNNNNNAGG 1 cut(s) 914
XapI RAATTY 2 cut(s) 749, 1049
XceI RCATGY 1 cut(s) 1104
XcmI CCANNNNNNNNNTGG 1 cut(s) 837
XmnI GAANNNNTTC 1 cut(s) 1241
XspI CTAG 5 cut(s) 26, 81, 848, 899, 965
ZraI GACGTC 1 cut(s) 820
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.