RLG00000016075

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000213
Physical Location & Seq
Forward (+)
3706693 .. 3708005
1313 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016075

Sequence Viewer

Length: 1230 bp
ATGGCCCCCAGGAAACCTCATAACCTAGCCTCCGCCACCAGCAATGGCGAAGAGGAGACGCACCATCATCGGCGTCGGCCTTGCAGTGTACATCATGGGCAGAAGTCTCATGAGCATGATATGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAAAAGCCGAGGGACAGAGAAGGTGAAGAAGAAGAAACTGAAATTGAATGAGGTGGAGGATGATGATCCAGTGCAATTGCGCCAAGTGGCTTATGCCGCTGGGGATCATCTCCCCGCTTCCATCGGTGGCGGTGTTTTCGGCTCCCAGATTGTTTTCGCCGGTGGCGTGAAACCCAGCTTCCCTATAATTTCATTACTTCGTTCCGACTTGGTTTGGCATAGAGATGTTTATGCCTTCGAAACTGACCCCAACAAGCAGCAGCAGCAGCCTCATGATATTACCAAGATGGCTGCTACTCTACTACAAGCCAAGTTTTACCCTCTAATCGTGGAGCTTGGCGGGAAACTCTACGCTCTTTCTGGTTTGCGGGTCTCCGATCCGCCTTCATTTGAGGTATTTGACCCCAATGTGGGCAAGTGGGCAGCTTTGCCTGAACCTCCATTCTTCCAAATTGGCTCTCGATATTGGGAAGATGCCGAATTCTCTTATGCAATTACGGGCACCAAGATCTTTGCCTCCCATGAAAAATGTCCAGTGTTCTGCTTTGACGTCGCCCACCCAGACAGAGAATGGAGACTGGTCTCTACTATGTGCCAACGCCGCCCTTTTCCGTTCCGGCACAAAACTCTGGTCCTTGACCTGCCGGAGGATGACAAGAAGAAGTTACTGTTTGCCTACACCAATGATTGGCGTCTAGGAGTTTATATTCTGGCCTTGGATGAAAATCAAGAATCTATCACACAAATTGGTGATTGGAAGATCCCTTCGTGGCCTTATGAATTTGGTTACTTATCAGCATGTAGTATTGTGCACATTGGAGGTCAGAAAGCATGCTTTGTTATCACCCGGTTGGGCGTCCCAAGTGAATACAAAGCTGAATATGAGCCTGGGACTCATAAGACGTGGGGAATTGCCATACCATTTCAATTTGACCTTGATATCTCCAAGGTGGACAAGGACAAGAAGAATTGTTTCACCCTCCAATTCATGTCTCTTCGCATCTTCGAGTACCATACCAACCCATCCAGTTTTCCTGAACCTGGACCGGTTGGTTGCTTTGTGCTGTGA

Protein Analysis

410

Amino Acids

46.66

Weight (kDa)

9.01

Isoelectric Point (pI)

45.71

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 152 - 248 2e-09 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 714
Acc36I ACCTGC 1 cut(s) 810
AccB1I GGYRCC 1 cut(s) 662
AccB7I CCANNNNNTGG 1 cut(s) 849
AciI CCGC 8 cut(s) 33, 258, 276, 291, 501, 529, 542, 763
AclWI GGATC 4 cut(s) 221, 273, 533, 916
AcsI RAATTY 2 cut(s) 641, 941
AcyI GRCGYC 4 cut(s) 73, 711, 853, 1017
AfaI GTAC 2 cut(s) 90, 1172
AfiI CCNNNNNNNGG 5 cut(s) 571, 572, 808, 849, 1202
AgeI ACCGGT 1 cut(s) 1207
AgsI TTSAA 2 cut(s) 208, 1088
AjiI CACGTC 1 cut(s) 1065
AjnI CCWGG 3 cut(s) 8, 1048, 1201
AluBI AGCT 4 cut(s) 339, 496, 587, 1037
AluI AGCT 4 cut(s) 339, 496, 587, 1037
Alw21I GWGCWC 1 cut(s) 975
Alw26I GTCTC 6 cut(s) 50, 111, 538, 730, 748, 1158
Alw44I GTGCAC 1 cut(s) 971
AlwI GGATC 4 cut(s) 221, 273, 533, 916
AoxI GGCC 4 cut(s) 3, 77, 873, 932
ApaLI GTGCAC 1 cut(s) 971
ApeKI GCWGC 6 cut(s) 418, 421, 424, 427, 452, 584
ApoI RAATTY 2 cut(s) 641, 941
ArsI GACNNNNNNTTYG 2 cut(s) 777, 809
AsiGI ACCGGT 1 cut(s) 1207
Asp700I GAANNNNTTC 1 cut(s) 1133
AspLEI GCGC 1 cut(s) 243
AspS9I GGNCC 3 cut(s) 4, 793, 1205
AsuC2I CCSGG 1 cut(s) 1009
AsuHPI GGTGA 4 cut(s) 196, 923, 997, 1129
AsuII TTCGAA 1 cut(s) 399
AvaII GGWCC 2 cut(s) 793, 1205
BaeGI GKGCMC 2 cut(s) 665, 975
BanI GGYRCC 1 cut(s) 662
Bbv12I GWGCWC 1 cut(s) 975
BbvI GCAGC 6 cut(s) 430, 433, 436, 439, 439, 596
BccI CCATC 4 cut(s) 72, 290, 442, 1192
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 3 cut(s) 10, 1050, 1203
BcnI CCSGG 1 cut(s) 1009
BcoDI GTCTC 6 cut(s) 50, 111, 538, 730, 748, 1158
BfaI CTAG 2 cut(s) 26, 857
BfuAI ACCTGC 1 cut(s) 810
BglII AGATCT 1 cut(s) 669
BisI GCNGC 8 cut(s) 258, 419, 422, 425, 428, 453, 585, 763
BlsI GCNGC 8 cut(s) 259, 420, 423, 426, 429, 454, 586, 764
Bme1390I CCNGG 4 cut(s) 10, 1009, 1050, 1203
Bme18I GGWCC 2 cut(s) 793, 1205
BmgBI CACGTC 1 cut(s) 1065
BmgT120I GGNCC 3 cut(s) 4, 793, 1205
BmiI GGNNCC 3 cut(s) 6, 304, 664
BmrFI CCNGG 4 cut(s) 10, 1009, 1050, 1203
BmsI GCATC 2 cut(s) 625, 1170
Bpu14I TTCGAA 1 cut(s) 399
BpuMI CCSGG 1 cut(s) 1009
BsaBI GATNNNNATC 2 cut(s) 225, 885
BsaHI GRCGYC 4 cut(s) 73, 711, 853, 1017
BsaI GGTCTC 2 cut(s) 538, 748
BsaJI CCNNGG 5 cut(s) 8, 169, 876, 1049, 1107
BsaWI WCCGGW 1 cut(s) 1207
BsaXI ACNNNNNCTCC 2 cut(s) 14, 44
Bsc4I CCNNNNNNNGG 5 cut(s) 571, 572, 808, 849, 1202
Bse118I RCCGGY 2 cut(s) 320, 1207
Bse1I ACTGG 4 cut(s) 230, 695, 744, 1188
Bse3DI GCAATG 1 cut(s) 49
Bse8I GATNNNNATC 2 cut(s) 225, 885
BseBI CCWGG 3 cut(s) 10, 1050, 1203
BseDI CCNNGG 5 cut(s) 8, 169, 876, 1049, 1107
BseGI GGATG 4 cut(s) 226, 817, 886, 1184
BseJI GATNNNNATC 2 cut(s) 225, 885
BseLI CCNNNNNNNGG 5 cut(s) 571, 572, 808, 849, 1202
BseMI GCAATG 1 cut(s) 49
BseNI ACTGG 4 cut(s) 230, 695, 744, 1188
BseRI GAGGAG 1 cut(s) 68
BseSI GKGCMC 2 cut(s) 665, 975
BseXI GCAGC 6 cut(s) 430, 433, 436, 439, 439, 596
BseYI CCCAGC 2 cut(s) 260, 335
BshFI GGCC 4 cut(s) 5, 79, 875, 934
BshNI GGYRCC 1 cut(s) 662
BshTI ACCGGT 1 cut(s) 1207
BsiHKAI GWGCWC 1 cut(s) 975
BsiSI CCGG 5 cut(s) 321, 778, 806, 1009, 1208
BslFI GGGAC 3 cut(s) 187, 1004, 1066
BslI CCNNNNNNNGG 5 cut(s) 571, 572, 808, 849, 1202
BsmAI GTCTC 6 cut(s) 50, 111, 538, 730, 748, 1158
BsmBI CGTCTC 1 cut(s) 50
BsmFI GGGAC 3 cut(s) 187, 1004, 1066
BsnI GGCC 4 cut(s) 5, 79, 875, 934
Bso31I GGTCTC 2 cut(s) 538, 748
Bsp119I TTCGAA 1 cut(s) 399
Bsp1286I GDGCHC 2 cut(s) 665, 975
Bsp1407I TGTACA 1 cut(s) 88
Bsp143I GATC 5 cut(s) 226, 265, 538, 669, 921
BspACI CCGC 8 cut(s) 33, 258, 276, 291, 501, 529, 542, 763
BspANI GGCC 4 cut(s) 5, 79, 875, 934
BspHI TCATGA 2 cut(s) 109, 433
BspLI GGNNCC 3 cut(s) 6, 304, 664
BspMI ACCTGC 1 cut(s) 810
BspPI GGATC 4 cut(s) 221, 273, 533, 916
BspT104I TTCGAA 1 cut(s) 399
BspT107I GGYRCC 1 cut(s) 662
BspTNI GGTCTC 2 cut(s) 538, 748
BsrDI GCAATG 1 cut(s) 49
BsrFI RCCGGY 2 cut(s) 320, 1207
BsrGI TGTACA 1 cut(s) 88
BsrI ACTGG 4 cut(s) 230, 695, 744, 1188
BssAI RCCGGY 2 cut(s) 320, 1207
BssECI CCNNGG 5 cut(s) 8, 169, 876, 1049, 1107
BssMI GATC 5 cut(s) 226, 265, 538, 669, 921
BssNI GRCGYC 4 cut(s) 73, 711, 853, 1017
BssT1I CCWWGG 2 cut(s) 876, 1107
Bst2UI CCWGG 3 cut(s) 10, 1050, 1203
Bst4CI ACNGT 1 cut(s) 831
Bst6I CTCTTC 2 cut(s) 45, 1161
BstACI GRCGYC 4 cut(s) 73, 711, 853, 1017
BstAUI TGTACA 1 cut(s) 88
BstBI TTCGAA 1 cut(s) 399
BstC8I GCNNGC 1 cut(s) 994
BstENI CCTNNNNNAGG 1 cut(s) 806
BstF5I GGATG 4 cut(s) 226, 817, 886, 1184
BstHHI GCGC 1 cut(s) 243
BstKTI GATC 5 cut(s) 229, 268, 541, 672, 924
BstMAI GTCTC 6 cut(s) 50, 111, 538, 730, 748, 1158
BstMBI GATC 5 cut(s) 226, 265, 538, 669, 921
BstMWI GCNNNNNNNGC 4 cut(s) 257, 424, 427, 762
BstNI CCWGG 3 cut(s) 10, 1050, 1203
BstNSI RCATGY 2 cut(s) 963, 996
BstSCI CCNGG 4 cut(s) 8, 1007, 1048, 1201
BstSLI GKGCMC 2 cut(s) 665, 975
BstV1I GCAGC 6 cut(s) 430, 433, 436, 439, 439, 596
BstX2I RGATCY 2 cut(s) 669, 921
BstYI RGATCY 2 cut(s) 669, 921
BsuRI GGCC 4 cut(s) 5, 79, 875, 934
BtrI CACGTC 1 cut(s) 1065
BtsCI GGATG 4 cut(s) 226, 817, 886, 1184
BtsI GCAGTG 1 cut(s) 91
BtsIMutI CAGTG 3 cut(s) 91, 237, 702
BveI ACCTGC 1 cut(s) 810
Cac8I GCNNGC 1 cut(s) 994
CciI TCATGA 2 cut(s) 109, 433
CfoI GCGC 1 cut(s) 243
Cfr10I RCCGGY 2 cut(s) 320, 1207
Cfr13I GGNCC 3 cut(s) 4, 793, 1205
CseI GACGC 4 cut(s) 62, 67, 842, 1006
Csp6I GTAC 2 cut(s) 89, 1171
CspAI ACCGGT 1 cut(s) 1207
CviAII CATG 8 cut(s) 95, 110, 116, 434, 683, 960, 993, 1150
CviQI GTAC 2 cut(s) 89, 1171
DpnI GATC 5 cut(s) 228, 267, 540, 671, 923
DpnII GATC 5 cut(s) 226, 265, 538, 669, 921
Eam1104I CTCTTC 2 cut(s) 45, 1161
EarI CTCTTC 2 cut(s) 45, 1161
EciI GGCGGA 2 cut(s) 22, 531
Eco130I CCWWGG 2 cut(s) 876, 1107
Eco31I GGTCTC 2 cut(s) 538, 748
Eco32I GATATC 1 cut(s) 1102
Eco47I GGWCC 2 cut(s) 793, 1205
EcoNI CCTNNNNNAGG 1 cut(s) 806
EcoRI GAATTC 1 cut(s) 641
EcoRII CCWGG 3 cut(s) 8, 1048, 1201
EcoRV GATATC 1 cut(s) 1102
EcoT14I CCWWGG 2 cut(s) 876, 1107
ErhI CCWWGG 2 cut(s) 876, 1107
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 8 cut(s) 98, 113, 119, 437, 686, 963, 996, 1153
FaqI GGGAC 3 cut(s) 187, 1004, 1066
FatI CATG 8 cut(s) 94, 109, 115, 433, 682, 959, 992, 1149
FauI CCCGC 3 cut(s) 283, 494, 522
Fnu4HI GCNGC 8 cut(s) 258, 419, 422, 425, 428, 453, 585, 763
FokI GGATG 4 cut(s) 233, 824, 893, 1171
Fsp4HI GCNGC 8 cut(s) 258, 419, 422, 425, 428, 453, 585, 763
FspBI CTAG 2 cut(s) 26, 857
GlaI GCGC 1 cut(s) 242
GluI GCNGC 8 cut(s) 258, 419, 422, 425, 428, 453, 585, 763
GsaI CCCAGC 2 cut(s) 264, 339
HaeIII GGCC 4 cut(s) 5, 79, 875, 934
HapII CCGG 5 cut(s) 321, 778, 806, 1009, 1208
HgaI GACGC 4 cut(s) 62, 67, 842, 1006
HhaI GCGC 1 cut(s) 243
Hin1I GRCGYC 4 cut(s) 73, 711, 853, 1017
Hin1II CATG 8 cut(s) 98, 113, 119, 437, 686, 963, 996, 1153
Hin6I GCGC 1 cut(s) 241
HinP1I GCGC 1 cut(s) 241
HinfI GANTC 2 cut(s) 893, 1054
HpaII CCGG 5 cut(s) 321, 778, 806, 1009, 1208
HphI GGTGA 4 cut(s) 196, 923, 997, 1129
Hpy166II GTNNAC 3 cut(s) 89, 973, 1114
Hpy188I TCNGA 3 cut(s) 367, 538, 987
Hpy188III TCNNGA 5 cut(s) 110, 434, 621, 890, 1196
Hpy8I GTNNAC 3 cut(s) 89, 973, 1114
Hpy99I CGWCG 2 cut(s) 78, 716
HpyAV CCTTC 5 cut(s) 145, 175, 406, 555, 936
HpyCH4III ACNGT 1 cut(s) 831
HpyCH4IV ACGT 2 cut(s) 711, 1064
HpyCH4V TGCA 4 cut(s) 84, 235, 653, 973
HpyF10VI GCNNNNNNNGC 4 cut(s) 257, 424, 427, 762
HpySE526I ACGT 2 cut(s) 711, 1064
Hsp92I GRCGYC 4 cut(s) 73, 711, 853, 1017
Hsp92II CATG 8 cut(s) 98, 113, 119, 437, 686, 963, 996, 1153
HspAI GCGC 1 cut(s) 241
Kzo9I GATC 5 cut(s) 226, 265, 538, 669, 921
LmnI GCTCC 2 cut(s) 308, 493
Lsp1109I GCAGC 6 cut(s) 430, 433, 436, 439, 439, 596
LweI GCATC 2 cut(s) 625, 1170
MaeI CTAG 2 cut(s) 26, 857
MaeII ACGT 2 cut(s) 711, 1064
MaeIII GTNAC 2 cut(s) 825, 947
MalI GATC 5 cut(s) 228, 267, 540, 671, 923
MboI GATC 5 cut(s) 226, 265, 538, 669, 921
MfeI CAATTG 1 cut(s) 236
MflI RGATCY 2 cut(s) 669, 921
MhlI GDGCHC 2 cut(s) 665, 975
MlyI GAGTC 1 cut(s) 1048
MmeI TCCRAC 1 cut(s) 390
MroXI GAANNNNTTC 1 cut(s) 1133
MslI CAYNNNNRTG 2 cut(s) 114, 384
MspA1I CMGCKG 1 cut(s) 260
MspI CCGG 5 cut(s) 321, 778, 806, 1009, 1208
MspR9I CCNGG 4 cut(s) 10, 1009, 1050, 1203
MunI CAATTG 1 cut(s) 236
MvaI CCWGG 3 cut(s) 10, 1050, 1203
MwoI GCNNNNNNNGC 4 cut(s) 257, 424, 427, 762
NciI CCSGG 1 cut(s) 1009
NdeII GATC 5 cut(s) 226, 265, 538, 669, 921
NlaIII CATG 8 cut(s) 98, 113, 119, 437, 686, 963, 996, 1153
NlaIV GGNNCC 3 cut(s) 6, 304, 664
NmeAIII GCCGAG 1 cut(s) 194
NspI RCATGY 2 cut(s) 963, 996
NspV TTCGAA 1 cut(s) 399
PaeI GCATGC 1 cut(s) 996
PagI TCATGA 2 cut(s) 109, 433
PcsI WCGNNNNNNNCGW 1 cut(s) 324
PdmI GAANNNNTTC 1 cut(s) 1133
PfeI GAWTC 1 cut(s) 893
PflMI CCANNNNNTGG 1 cut(s) 849
PinAI ACCGGT 1 cut(s) 1207
PkrI GCNGC 8 cut(s) 259, 420, 423, 426, 429, 454, 586, 764
PleI GAGTC 1 cut(s) 1048
PpsI GAGTC 1 cut(s) 1048
Psp6I CCWGG 3 cut(s) 8, 1048, 1201
PspFI CCCAGC 2 cut(s) 260, 335
PspGI CCWGG 3 cut(s) 8, 1048, 1201
PspN4I GGNNCC 3 cut(s) 6, 304, 664
PspPI GGNCC 3 cut(s) 4, 793, 1205
PsuI RGATCY 2 cut(s) 669, 921
RsaI GTAC 2 cut(s) 90, 1172
RsaNI GTAC 2 cut(s) 89, 1171
RseI CAYNNNNRTG 2 cut(s) 114, 384
SatI GCNGC 8 cut(s) 258, 419, 422, 425, 428, 453, 585, 763
Sau3AI GATC 5 cut(s) 226, 265, 538, 669, 921
Sau96I GGNCC 3 cut(s) 4, 793, 1205
SchI GAGTC 1 cut(s) 1048
ScrFI CCNGG 4 cut(s) 10, 1009, 1050, 1203
SduI GDGCHC 2 cut(s) 665, 975
SfaNI GCATC 2 cut(s) 625, 1170
SfuI TTCGAA 1 cut(s) 399
SgrAI CRCCGGYG 1 cut(s) 320
SinI GGWCC 2 cut(s) 793, 1205
SmiMI CAYNNNNRTG 2 cut(s) 114, 384
SphI GCATGC 1 cut(s) 996
SsiI CCGC 8 cut(s) 33, 258, 276, 291, 501, 529, 542, 763
SspMI CTAG 2 cut(s) 26, 857
StyD4I CCNGG 4 cut(s) 8, 1007, 1048, 1201
StyI CCWWGG 2 cut(s) 876, 1107
TaaI ACNGT 1 cut(s) 831
TaiI ACGT 2 cut(s) 714, 1067
TaqI TCGA 3 cut(s) 399, 622, 1167
TatI WGTACW 1 cut(s) 88
TauI GCSGC 2 cut(s) 260, 765
TfiI GAWTC 1 cut(s) 893
TscAI CASTG 3 cut(s) 91, 237, 702
TseI GCWGC 6 cut(s) 418, 421, 424, 427, 452, 584
TspDTI ATGAA 7 cut(s) 137, 342, 537, 699, 897, 954, 1138
TspGWI ACGGA 1 cut(s) 762
TspRI CASTG 3 cut(s) 91, 237, 702
Van91I CCANNNNNTGG 1 cut(s) 849
VneI GTGCAC 1 cut(s) 971
VpaK11BI GGWCC 2 cut(s) 793, 1205
XagI CCTNNNNNAGG 1 cut(s) 806
XapI RAATTY 2 cut(s) 641, 941
XceI RCATGY 2 cut(s) 963, 996
XcmI CCANNNNNNNNNTGG 1 cut(s) 729
XmnI GAANNNNTTC 1 cut(s) 1133
XspI CTAG 2 cut(s) 26, 857
ZraI GACGTC 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.