RLG00000029766

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr6
OG0000213
Physical Location & Seq
Forward (+)
48786648 .. 48789037
2390 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000029766

Sequence Viewer

Length: 1527 bp
ATGTCCCACAAAAAATGTCTTAAATTAGCCGAAGCCAGCGATGGCGAAGAAAGAAGGCATCGTCTGGTTCGGCATTGCTGCCCTCTTCAGAAGCATAAGAAGCACAGGTGTGATGGATGCGTGATGAAGAAGCAGAAGAAGAAGAAAATAAGAATATCAGAGAAGGAGAAGAAGACAACGAAGAAGTTGAAGCTGGAGGAGGAGGAGGCTAAGAAGTCACTCTACCTATGTTTCGTTGAACAACGCGAGGGTGGGAGCGTCGCTATTGTTGTTCGTACCATCAAATTATCCGACTTGTTATCCTCCGATGAAGAATTGCAATTGCGGCAAGTGGCTTATAAGGCCGGGGAAGATGTTCCCGATTTTGTTGGTTGTGCTGTTTTTGGCTCCCAAATCATTTTCGCCGGTGGCGTGTGCCCCAGCTTGGGTTCCGGTGACAGATTTCCGCCAATAAGTTCTGAACTCTGGAATAGAGATGTTCATGCCTTCGAGGTTCATGACAATGTTTTCAGGAAGATGGATGCGACTTTACAGAGAGGGAAATTTTTCCCTATGATGGTGGAGCTGGGCGGGAAAGTGTACGCTCTTTCCTATAAGCTGATCGCTGATCCTCCATCATTCGAGGTATTTGACCCTAAAATAGGCCTGTGGAAGGGTTTGCCCCAACCTCCATTTTTCCAACCCAGATCTCCATATGACTCTCATACTTCCTTCTTTTATGCAATTGCCGGCACCAAGATGTTTGTGTCCCACGACAAATGTCCGGTGTTCTGCTTTGACGTGGCACACCCAGACAGAGAATGGAGACTAGTCCCTACTATGTGTGGCGGCGGCCCTTTTCCTTTTATGGGCAAAGCTTTTGTCCTGGACCTGCCGGAGCACCATGATGACAAGAAGAAGATCATGTTTGCTTATATTCATGATACGCGGCGGCTGGGAGTTTATCTTTTTTCCTTGGAGGAAGGTCAGGAATCCATTGCACCGATCGGTTATTTGAAGCTGCCATGGTGGCCTTATGAATTGGGTTCGGCAGCAGGCTGTCATTTTGTCCACATAGGAGGTCAGAAAGCTTGCATTCTTATCACCCAATTCAACCTTCCTTATGGTGAAGGACCTGACTATGAGCCCGGGACTTATAAGAAGCGGGGGGTTGCGATACCATTTCAATTTCAAGTTGATATCACTAAGGTGGACAGGGACGAGAAGAATTGTTTCACTCTCCAATTCATGACACCACGCACCTTCGAATTCCAGACCAACCCATCCACTTTTCCTCTACCTTTTACGGTTGGCTGCTTTGTGCTGTGGGAGATTCTGATATCAAGTTCACAGTGGAACCGCTCGAGTTGGCTTGGTTTACAGTGGGGTTGGCCAGGTTCCCTGGTGCCTTCTGGTGTAGTTCTCTTCTTACATCATGGTATACGTATGGAACTTTGTATACTGAGAAGTGGTGCATGGAAAGTAAATTTTGTTCGCTCTCAAGCCGGTAAGATGGGTATTGATAGGGTTCAAGAGTTGAAGCTGTAA

Protein Analysis

509

Amino Acids

57.89

Weight (kDa)

8.94

Isoelectric Point (pI)

47.68

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 177 - 287 8.2e-10 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 339, 1137
Acc36I ACCTGC 1 cut(s) 879
AccB1I GGYRCC 2 cut(s) 731, 1384
AccBSI CCGCTC 1 cut(s) 1341
AccI GTMKAC 2 cut(s) 1420, 1438
AccII CGCG 2 cut(s) 246, 928
AciI CCGC 9 cut(s) 325, 446, 570, 828, 831, 928, 931, 1144, 1339
AclWI GGATC 1 cut(s) 602
AcoI YGGCCR 1 cut(s) 1370
AcsI RAATTY 3 cut(s) 542, 1247, 1465
AcuI CTGAAG 1 cut(s) 71
AfaI GTAC 2 cut(s) 277, 581
AfiI CCNNNNNNNGG 6 cut(s) 424, 425, 556, 641, 652, 848
AgsI TTSAA 8 cut(s) 190, 239, 997, 1093, 1166, 1172, 1511, 1519
AhlI ACTAGT 1 cut(s) 808
AjiI CACGTC 1 cut(s) 781
AjnI CCWGG 3 cut(s) 864, 1372, 1380
AjuI GAANNNNNNNTTGG 2 cut(s) 1080, 1112
AleI CACNNNNGTG 2 cut(s) 108, 1187
AluBI AGCT 8 cut(s) 193, 423, 565, 598, 857, 1000, 1070, 1522
AluI AGCT 8 cut(s) 193, 423, 565, 598, 857, 1000, 1070, 1522
Alw21I GWGCWC 1 cut(s) 882
Alw26I GTCTC 1 cut(s) 799
AlwI GGATC 1 cut(s) 602
Ama87I CYCGRG 2 cut(s) 1127, 1342
AoxI GGCC 5 cut(s) 342, 643, 832, 1010, 1370
ApeKI GCWGC 4 cut(s) 78, 1000, 1031, 1293
ApoI RAATTY 3 cut(s) 542, 1247, 1465
ArsI GACNNNNNNTTYG 2 cut(s) 846, 878
Asp700I GAANNNNTTC 3 cut(s) 354, 545, 1211
AspS9I GGNCC 3 cut(s) 833, 868, 1112
AsuC2I CCSGG 3 cut(s) 346, 1128, 1129
AsuHPI GGTGA 3 cut(s) 446, 1075, 1118
AsuII TTCGAA 1 cut(s) 1245
AvaI CYCGRG 2 cut(s) 1127, 1342
AvaII GGWCC 2 cut(s) 868, 1112
BaeGI GKGCMC 1 cut(s) 419
BalI TGGCCA 1 cut(s) 1372
BanI GGYRCC 2 cut(s) 731, 1384
BanII GRGCYC 1 cut(s) 1128
BarI GAAGNNNNNNTAC 2 cut(s) 206, 238
BbsI GAAGAC 1 cut(s) 179
Bbv12I GWGCWC 1 cut(s) 882
BbvI GCAGC 4 cut(s) 65, 987, 1043, 1280
BccI CCATC 8 cut(s) 35, 107, 287, 511, 550, 622, 1270, 1486
BciT130I CCWGG 3 cut(s) 866, 1374, 1382
BcnI CCSGG 3 cut(s) 346, 1128, 1129
BcoDI GTCTC 1 cut(s) 799
BcuI ACTAGT 1 cut(s) 808
BfaI CTAG 1 cut(s) 809
BfuAI ACCTGC 1 cut(s) 879
BglI GCCNNNNNGGC 1 cut(s) 1009
BglII AGATCT 1 cut(s) 686
BisI GCNGC 9 cut(s) 79, 326, 829, 832, 929, 932, 1001, 1032, 1294
BlsI GCNGC 9 cut(s) 80, 327, 830, 833, 930, 933, 1002, 1033, 1295
Bme1390I CCNGG 6 cut(s) 346, 866, 1128, 1129, 1374, 1382
Bme18I GGWCC 2 cut(s) 868, 1112
BmeT110I CYCGRG 2 cut(s) 1127, 1342
BmgBI CACGTC 1 cut(s) 781
BmgT120I GGNCC 3 cut(s) 833, 868, 1112
BmiI GGNNCC 6 cut(s) 388, 430, 733, 1337, 1378, 1386
BmrFI CCNGG 6 cut(s) 346, 866, 1128, 1129, 1374, 1382
BmsI GCATC 3 cut(s) 67, 107, 511
BoxI GACNNNNGTC 1 cut(s) 759
BpiI GAAGAC 1 cut(s) 179
BpmI CTGGAG 1 cut(s) 215
Bpu14I TTCGAA 1 cut(s) 1245
BpuEI CTTGAG 1 cut(s) 1464
BpuMI CCSGG 3 cut(s) 346, 1128, 1129
BsaAI YACGTR 1 cut(s) 1424
BsaJI CCNNGG 5 cut(s) 345, 954, 1004, 1127, 1380
BsaWI WCCGGW 2 cut(s) 431, 763
Bsc4I CCNNNNNNNGG 6 cut(s) 424, 425, 556, 641, 652, 848
Bse118I RCCGGY 3 cut(s) 404, 728, 1484
Bse3DI GCAATG 2 cut(s) 73, 975
BseBI CCWGG 3 cut(s) 866, 1374, 1382
BseDI CCNNGG 5 cut(s) 345, 954, 1004, 1127, 1380
BseGI GGATG 3 cut(s) 122, 526, 1262
BseLI CCNNNNNNNGG 6 cut(s) 424, 425, 556, 641, 652, 848
BseMI GCAATG 2 cut(s) 73, 975
BseMII CTCAG 1 cut(s) 1433
BseRI GAGGAG 3 cut(s) 212, 215, 218
BseSI GKGCMC 1 cut(s) 419
BseXI GCAGC 4 cut(s) 65, 987, 1043, 1280
BseYI CCCAGC 3 cut(s) 419, 565, 934
Bsh1236I CGCG 2 cut(s) 246, 928
Bsh1285I CGRYCG 1 cut(s) 987
BshFI GGCC 5 cut(s) 344, 645, 834, 1012, 1372
BshNI GGYRCC 2 cut(s) 731, 1384
BsiEI CGRYCG 1 cut(s) 987
BsiHKAI GWGCWC 1 cut(s) 882
BsiHKCI CYCGRG 2 cut(s) 1127, 1342
BsiSI CCGG 8 cut(s) 345, 405, 432, 729, 764, 875, 1128, 1485
BslFI GGGAC 4 cut(s) 733, 797, 1144, 1211
BslI CCNNNNNNNGG 6 cut(s) 424, 425, 556, 641, 652, 848
BsmAI GTCTC 1 cut(s) 799
BsmFI GGGAC 4 cut(s) 733, 797, 1144, 1211
BsmI GAATGC 1 cut(s) 1074
BsnI GGCC 5 cut(s) 344, 645, 834, 1012, 1372
BsoBI CYCGRG 2 cut(s) 1127, 1342
Bsp119I TTCGAA 1 cut(s) 1245
Bsp1286I GDGCHC 3 cut(s) 419, 882, 1128
Bsp143I GATC 5 cut(s) 600, 607, 686, 900, 984
Bsp19I CCATGG 1 cut(s) 1004
BspACI CCGC 9 cut(s) 325, 446, 570, 828, 831, 928, 931, 1144, 1339
BspANI GGCC 5 cut(s) 344, 645, 834, 1012, 1372
BspCNI CTCAG 1 cut(s) 1434
BspFNI CGCG 2 cut(s) 246, 928
BspHI TCATGA 3 cut(s) 496, 919, 1227
BspLI GGNNCC 6 cut(s) 388, 430, 733, 1337, 1378, 1386
BspMI ACCTGC 1 cut(s) 879
BspPI GGATC 1 cut(s) 602
BspT104I TTCGAA 1 cut(s) 1245
BspT107I GGYRCC 2 cut(s) 731, 1384
BsrBI CCGCTC 1 cut(s) 1341
BsrDI GCAATG 2 cut(s) 73, 975
BsrFI RCCGGY 3 cut(s) 404, 728, 1484
BssAI RCCGGY 3 cut(s) 404, 728, 1484
BssECI CCNNGG 5 cut(s) 345, 954, 1004, 1127, 1380
BssMI GATC 5 cut(s) 600, 607, 686, 900, 984
BssNAI GTATAC 2 cut(s) 1421, 1439
BssT1I CCWWGG 2 cut(s) 954, 1004
Bst1107I GTATAC 2 cut(s) 1421, 1439
Bst2UI CCWGG 3 cut(s) 866, 1374, 1382
Bst4CI ACNGT 3 cut(s) 1288, 1332, 1362
Bst6I CTCTTC 2 cut(s) 90, 1409
BstBAI YACGTR 1 cut(s) 1424
BstBI TTCGAA 1 cut(s) 1245
BstC8I GCNNGC 4 cut(s) 37, 730, 1036, 1072
BstDEI CTNAG 3 cut(s) 210, 1185, 1442
BstDSI CCRYGG 1 cut(s) 1004
BstENI CCTNNNNNAGG 2 cut(s) 639, 650
BstF5I GGATG 3 cut(s) 122, 526, 1262
BstFNI CGCG 2 cut(s) 246, 928
BstKTI GATC 5 cut(s) 603, 610, 689, 903, 987
BstMAI GTCTC 1 cut(s) 799
BstMBI GATC 5 cut(s) 600, 607, 686, 900, 984
BstMCI CGRYCG 1 cut(s) 987
BstMWI GCNNNNNNNGC 4 cut(s) 100, 325, 341, 1009
BstNI CCWGG 3 cut(s) 866, 1374, 1382
BstPAI GACNNNNGTC 1 cut(s) 759
BstSCI CCNGG 6 cut(s) 344, 864, 1126, 1127, 1372, 1380
BstSLI GKGCMC 1 cut(s) 419
BstSNI TACGTA 1 cut(s) 1424
BstUI CGCG 2 cut(s) 246, 928
BstV1I GCAGC 4 cut(s) 65, 987, 1043, 1280
BstV2I GAAGAC 1 cut(s) 179
BstX2I RGATCY 1 cut(s) 686
BstYI RGATCY 1 cut(s) 686
BstZ17I GTATAC 2 cut(s) 1421, 1439
BsuRI GGCC 5 cut(s) 344, 645, 834, 1012, 1372
BtgI CCRYGG 1 cut(s) 1004
BtgZI GCGATG 1 cut(s) 54
BtrI CACGTC 1 cut(s) 781
BtsCI GGATG 3 cut(s) 122, 526, 1262
BtsIMutI CAGTG 2 cut(s) 1337, 1367
BveI ACCTGC 1 cut(s) 879
Cac8I GCNNGC 4 cut(s) 37, 730, 1036, 1072
CciI TCATGA 3 cut(s) 496, 919, 1227
Cfr10I RCCGGY 3 cut(s) 404, 728, 1484
Cfr13I GGNCC 3 cut(s) 833, 868, 1112
Cfr9I CCCGGG 1 cut(s) 1127
CseI GACGC 1 cut(s) 247
Csp6I GTAC 2 cut(s) 276, 580
CviAII CATG 9 cut(s) 482, 497, 884, 904, 920, 1005, 1228, 1415, 1455
CviQI GTAC 2 cut(s) 276, 580
DdeI CTNAG 3 cut(s) 210, 1185, 1442
DpnI GATC 5 cut(s) 602, 609, 688, 902, 986
DpnII GATC 5 cut(s) 600, 607, 686, 900, 984
EaeI YGGCCR 1 cut(s) 1370
Eam1104I CTCTTC 2 cut(s) 90, 1409
EarI CTCTTC 2 cut(s) 90, 1409
EciI GGCGGA 1 cut(s) 435
Eco105I TACGTA 1 cut(s) 1424
Eco130I CCWWGG 2 cut(s) 954, 1004
Eco147I AGGCCT 1 cut(s) 645
Eco24I GRGCYC 1 cut(s) 1128
Eco32I GATATC 2 cut(s) 1180, 1320
Eco47I GGWCC 2 cut(s) 868, 1112
Eco57I CTGAAG 1 cut(s) 71
Eco88I CYCGRG 2 cut(s) 1127, 1342
EcoNI CCTNNNNNAGG 2 cut(s) 639, 650
EcoO109I RGGNCCY 1 cut(s) 1112
EcoRI GAATTC 1 cut(s) 1247
EcoRII CCWGG 3 cut(s) 864, 1372, 1380
EcoRV GATATC 2 cut(s) 1180, 1320
EcoT14I CCWWGG 2 cut(s) 954, 1004
EcoT38I GRGCYC 1 cut(s) 1128
ErhI CCWWGG 2 cut(s) 954, 1004
FaeI CATG 9 cut(s) 485, 500, 887, 907, 923, 1008, 1231, 1418, 1458
FaqI GGGAC 4 cut(s) 733, 797, 1144, 1211
FatI CATG 9 cut(s) 481, 496, 883, 903, 919, 1004, 1227, 1414, 1454
FauI CCCGC 2 cut(s) 563, 1137
FauNDI CATATG 1 cut(s) 694
FblI GTMKAC 2 cut(s) 1420, 1438
Fnu4HI GCNGC 9 cut(s) 79, 326, 829, 832, 929, 932, 1001, 1032, 1294
FokI GGATG 3 cut(s) 129, 533, 1249
FriOI GRGCYC 1 cut(s) 1128
Fsp4HI GCNGC 9 cut(s) 79, 326, 829, 832, 929, 932, 1001, 1032, 1294
FspBI CTAG 1 cut(s) 809
GluI GCNGC 9 cut(s) 79, 326, 829, 832, 929, 932, 1001, 1032, 1294
GsaI CCCAGC 3 cut(s) 423, 569, 938
GsuI CTGGAG 1 cut(s) 215
HaeIII GGCC 5 cut(s) 344, 645, 834, 1012, 1372
HapII CCGG 8 cut(s) 345, 405, 432, 729, 764, 875, 1128, 1485
HgaI GACGC 1 cut(s) 247
Hin1II CATG 9 cut(s) 485, 500, 887, 907, 923, 1008, 1231, 1418, 1458
HindIII AAGCTT 2 cut(s) 855, 1068
HinfI GANTC 3 cut(s) 698, 971, 1312
HpaII CCGG 8 cut(s) 345, 405, 432, 729, 764, 875, 1128, 1485
HphI GGTGA 3 cut(s) 446, 1075, 1118
Hpy166II GTNNAC 7 cut(s) 580, 1051, 1192, 1328, 1358, 1421, 1439
Hpy188I TCNGA 7 cut(s) 90, 160, 292, 307, 460, 1065, 1317
Hpy188III TCNNGA 9 cut(s) 359, 466, 497, 511, 920, 968, 1228, 1252, 1511
Hpy8I GTNNAC 7 cut(s) 580, 1051, 1192, 1328, 1358, 1421, 1439
Hpy99I CGWCG 1 cut(s) 263
HpyCH4III ACNGT 3 cut(s) 1288, 1332, 1362
HpyCH4IV ACGT 2 cut(s) 780, 1423
HpyCH4V TGCA 5 cut(s) 319, 722, 980, 1074, 1454
HpyF10VI GCNNNNNNNGC 4 cut(s) 100, 325, 341, 1009
HpyF3I CTNAG 3 cut(s) 210, 1185, 1442
HpySE526I ACGT 2 cut(s) 780, 1423
Hsp92II CATG 9 cut(s) 485, 500, 887, 907, 923, 1008, 1231, 1418, 1458
KroI GCCGGC 1 cut(s) 728
KroNI GCCGGC 1 cut(s) 730
Kzo9I GATC 5 cut(s) 600, 607, 686, 900, 984
LmnI GCTCC 4 cut(s) 255, 392, 562, 877
Lsp1109I GCAGC 4 cut(s) 65, 987, 1043, 1280
LweI GCATC 3 cut(s) 67, 107, 511
MaeI CTAG 1 cut(s) 809
MaeII ACGT 2 cut(s) 780, 1423
MaeIII GTNAC 2 cut(s) 216, 434
MalI GATC 5 cut(s) 602, 609, 688, 902, 986
MbiI CCGCTC 1 cut(s) 1341
MboI GATC 5 cut(s) 600, 607, 686, 900, 984
MfeI CAATTG 2 cut(s) 320, 723
MflI RGATCY 1 cut(s) 686
MhlI GDGCHC 3 cut(s) 419, 882, 1128
MlsI TGGCCA 1 cut(s) 1372
MluNI TGGCCA 1 cut(s) 1372
MlyI GAGTC 1 cut(s) 692
MmeI TCCRAC 2 cut(s) 315, 703
Mox20I TGGCCA 1 cut(s) 1372
MroNI GCCGGC 1 cut(s) 728
MroXI GAANNNNTTC 3 cut(s) 354, 545, 1211
MscI TGGCCA 1 cut(s) 1372
MseI TTAA 1 cut(s) 21
MslI CAYNNNNRTG 5 cut(s) 108, 501, 737, 885, 1187
Msp20I TGGCCA 1 cut(s) 1372
MspI CCGG 8 cut(s) 345, 405, 432, 729, 764, 875, 1128, 1485
MspR9I CCNGG 6 cut(s) 346, 866, 1128, 1129, 1374, 1382
MunI CAATTG 2 cut(s) 320, 723
Mva1269I GAATGC 1 cut(s) 1074
MvaI CCWGG 3 cut(s) 866, 1374, 1382
MvnI CGCG 2 cut(s) 246, 928
MwoI GCNNNNNNNGC 4 cut(s) 100, 325, 341, 1009
NaeI GCCGGC 1 cut(s) 730
NciI CCSGG 3 cut(s) 346, 1128, 1129
NcoI CCATGG 1 cut(s) 1004
NdeI CATATG 1 cut(s) 694
NdeII GATC 5 cut(s) 600, 607, 686, 900, 984
NgoMIV GCCGGC 1 cut(s) 728
NlaIII CATG 9 cut(s) 485, 500, 887, 907, 923, 1008, 1231, 1418, 1458
NlaIV GGNNCC 6 cut(s) 388, 430, 733, 1337, 1378, 1386
NmuCI GTSAC 2 cut(s) 216, 434
NspV TTCGAA 1 cut(s) 1245
OliI CACNNNNGTG 2 cut(s) 108, 1187
PaeR7I CTCGAG 1 cut(s) 1342
PagI TCATGA 3 cut(s) 496, 919, 1227
PceI AGGCCT 1 cut(s) 645
PcsI WCGNNNNNNNCGW 1 cut(s) 408
PctI GAATGC 1 cut(s) 1074
PdiI GCCGGC 1 cut(s) 730
PdmI GAANNNNTTC 3 cut(s) 354, 545, 1211
PfeI GAWTC 2 cut(s) 971, 1312
PfoI TCCNGGA 1 cut(s) 864
PkrI GCNGC 9 cut(s) 80, 327, 830, 833, 930, 933, 1002, 1033, 1295
Ple19I CGATCG 1 cut(s) 987
PleI GAGTC 1 cut(s) 692
PpsI GAGTC 1 cut(s) 692
Ppu21I YACGTR 1 cut(s) 1424
PpuMI RGGWCCY 1 cut(s) 1112
PshAI GACNNNNGTC 1 cut(s) 759
PsiI TTATAA 2 cut(s) 339, 1137
Psp5II RGGWCCY 1 cut(s) 1112
Psp6I CCWGG 3 cut(s) 864, 1372, 1380
PspFI CCCAGC 3 cut(s) 419, 565, 934
PspGI CCWGG 3 cut(s) 864, 1372, 1380
PspN4I GGNNCC 6 cut(s) 388, 430, 733, 1337, 1378, 1386
PspPI GGNCC 3 cut(s) 833, 868, 1112
PspPPI RGGWCCY 1 cut(s) 1112
PspXI VCTCGAGB 1 cut(s) 1342
PsrI GAACNNNNNNTAC 4 cut(s) 1422, 1454, 1455, 1487
PsuI RGATCY 1 cut(s) 686
PvuI CGATCG 1 cut(s) 987
RsaI GTAC 2 cut(s) 277, 581
RsaNI GTAC 2 cut(s) 276, 580
RseI CAYNNNNRTG 5 cut(s) 108, 501, 737, 885, 1187
SaqAI TTAA 1 cut(s) 21
SatI GCNGC 9 cut(s) 79, 326, 829, 832, 929, 932, 1001, 1032, 1294
Sau3AI GATC 5 cut(s) 600, 607, 686, 900, 984
Sau96I GGNCC 3 cut(s) 833, 868, 1112
SchI GAGTC 1 cut(s) 692
ScrFI CCNGG 6 cut(s) 346, 866, 1128, 1129, 1374, 1382
SduI GDGCHC 3 cut(s) 419, 882, 1128
SfaNI GCATC 3 cut(s) 67, 107, 511
Sfr274I CTCGAG 1 cut(s) 1342
SfuI TTCGAA 1 cut(s) 1245
SgrAI CRCCGGYG 1 cut(s) 404
SinI GGWCC 2 cut(s) 868, 1112
SlaI CTCGAG 1 cut(s) 1342
SmaI CCCGGG 1 cut(s) 1129
SmiMI CAYNNNNRTG 5 cut(s) 108, 501, 737, 885, 1187
SmlI CTYRAG 2 cut(s) 1342, 1479
SmoI CTYRAG 2 cut(s) 1342, 1479
SnaBI TACGTA 1 cut(s) 1424
SpeI ACTAGT 1 cut(s) 808
SseBI AGGCCT 1 cut(s) 645
SsiI CCGC 9 cut(s) 325, 446, 570, 828, 831, 928, 931, 1144, 1339
SspMI CTAG 1 cut(s) 809
StuI AGGCCT 1 cut(s) 645
StyD4I CCNGG 6 cut(s) 344, 864, 1126, 1127, 1372, 1380
StyI CCWWGG 2 cut(s) 954, 1004
TaaI ACNGT 3 cut(s) 1288, 1332, 1362
TaiI ACGT 2 cut(s) 783, 1426
TaqI TCGA 4 cut(s) 489, 621, 1245, 1343
TauI GCSGC 5 cut(s) 328, 831, 834, 931, 934
TfiI GAWTC 2 cut(s) 971, 1312
Tru1I TTAA 1 cut(s) 21
Tru9I TTAA 1 cut(s) 21
TscAI CASTG 2 cut(s) 1337, 1367
TseFI GTSAC 2 cut(s) 216, 434
TseI GCWGC 4 cut(s) 78, 1000, 1031, 1293
Tsp45I GTSAC 2 cut(s) 216, 434
TspDTI ATGAA 7 cut(s) 140, 324, 470, 485, 908, 1032, 1216
TspMI CCCGGG 1 cut(s) 1127
TspRI CASTG 2 cut(s) 1337, 1367
VpaK11BI GGWCC 2 cut(s) 868, 1112
XagI CCTNNNNNAGG 2 cut(s) 639, 650
XapI RAATTY 3 cut(s) 542, 1247, 1465
XcmI CCANNNNNNNNNTGG 1 cut(s) 798
XhoI CTCGAG 1 cut(s) 1342
XmaI CCCGGG 1 cut(s) 1127
XmiI GTMKAC 2 cut(s) 1420, 1438
XmnI GAANNNNTTC 3 cut(s) 354, 545, 1211
XspI CTAG 1 cut(s) 809
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.