RchiOBHm_Chr7g0225411

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
7
OG0000213
Physical Location & Seq
Reverse (-)
48081287 .. 48082765
1479 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ20188

Sequence Viewer

Length: 1281 bp
ATGTCGCTCAAATCCACTCTCAACCTAGCCAACAGAGCCAGCGATGGCGAAGAAGAAGGGCGTCATCGGCTTCGACGCTGCCGTGAACCACCGCATCATAAGGCCGATAAGTACAGGAGGTCTAAGAAGAAGAAGAGAAGTGAGAAGCTGAAGTTGAACGAGGAGGAGGCTAAGAAGTCTCTGTACATATGTCACATTGAACACCACCCTGGAAAGTGGGTCGCTTATGTTGTCCGCGCCATCAAGTTGTCCGATTTGTTATCCTCCTCCTCCTCCGATGATGATTTGAAATTACGGCAAGTGGGTTATAAAGCCGGGGATGAACTCCCCGGTTCTGTGGGTTGCGGTGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGGCCGTATGCCTTCATTCGATCGTCCCGACATAGTTTGGCATAGAAATGTTTATGCCTTTGAAACTGACCCCAACAAGCAGCCTCGTGATAATAGTAGAATTACCAAGATGGATGGCACATTAGTTGAAGCCAAGTTTCGTCCACGGATGGAGGAGCTGGGGGGCAAACTGTATGCACTTTCATATAGGCTTGTGGCTGATCCTCCCGCATTTGAGGTATTCGACCCGAAATTGGGGAGTTGGGCGCCCCTGCCAGAGCCTCCATTCTTCAAACGTCATGGTCAGTATAACCGCGGTGGCAACCTCTCTTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGGAGAGATGTCCTGTGTTCTGTTTCGATGTGTCTGACCCAGACAGAGAATGGAGATTAGTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGGAAACAAAGCTTTGGTCCTGGACCTGCCGGCTGATGACAAGAAGAAGATAATGTTTGCCTATACTATGGGTCGTTGGTATCTACGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCTATCACACCGATTGGTGATTTTAAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCAAAAAGATGTTATTTTGTTCATATAGGAGGTCAGAAAGCCTGCATTATTGCCCCCGAATTGGTTATGCCTTATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACGGGGTGTTGCCATGCCATTTCAATTTGAAGTTGATATCACCAAGGACGAGAAGAATTGTTTGACCCTCCAATTCATGCCTACTCGTATCTTCAAATTCTGTACCAACCCATCCACTTTTCCTGATCCTGAAGCATATGGTTGCTTTGTGCTGTAA

Protein Analysis

426

Amino Acids

48.83

Weight (kDa)

9.14

Isoelectric Point (pI)

51.95

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 172 - 266 5.2e-09 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 309, 1083
Acc36I ACCTGC 1 cut(s) 864
AccB1I GGYRCC 2 cut(s) 637, 716
AccII CGCG 3 cut(s) 237, 687, 816
AciI CCGC 9 cut(s) 92, 235, 345, 375, 393, 600, 685, 687, 816
AclWI GGATC 2 cut(s) 587, 1244
AcoI YGGCCR 1 cut(s) 394
AcsI RAATTY 2 cut(s) 1004, 1220
AcuI CTGAAG 2 cut(s) 170, 1275
AcyI GRCGYC 2 cut(s) 61, 638
AdeI CACNNNGTG 1 cut(s) 1130
AfaI GTAC 3 cut(s) 113, 185, 1228
AfiI CCNNNNNNNGG 3 cut(s) 625, 626, 1069
AgsI TTSAA 9 cut(s) 157, 200, 289, 455, 521, 664, 1148, 1154, 1219
AjnI CCWGG 2 cut(s) 208, 849
AluBI AGCT 4 cut(s) 148, 550, 842, 979
AluI AGCT 4 cut(s) 148, 550, 842, 979
Alw26I GTCTC 3 cut(s) 183, 738, 802
AlwI GGATC 2 cut(s) 587, 1244
AlwNI CAGNNNCTG 1 cut(s) 713
AoxI GGCC 3 cut(s) 102, 394, 817
ApeKI GCWGC 3 cut(s) 78, 472, 979
ApoI RAATTY 2 cut(s) 1004, 1220
ArsI GACNNNNNNTTYG 2 cut(s) 831, 863
AspLEI GCGC 2 cut(s) 239, 640
AspS9I GGNCC 4 cut(s) 818, 847, 853, 1091
AsuC2I CCSGG 3 cut(s) 316, 330, 361
AsuHPI GGTGA 2 cut(s) 980, 1156
AvaII GGWCC 3 cut(s) 847, 853, 1091
AxyI CCTNAGG 1 cut(s) 993
BanI GGYRCC 2 cut(s) 637, 716
BanII GRGCYC 1 cut(s) 359
BarI GAAGNNNNNNTAC 2 cut(s) 167, 199
BauI CACGAG 1 cut(s) 477
BbvI GCAGC 3 cut(s) 65, 484, 966
BccI CCATC 6 cut(s) 38, 248, 496, 500, 535, 1243
BceAI ACGGC 3 cut(s) 66, 311, 381
BciT130I CCWGG 2 cut(s) 210, 851
BcnI CCSGG 3 cut(s) 316, 330, 361
BcoDI GTCTC 3 cut(s) 183, 738, 802
BfaI CTAG 1 cut(s) 26
BfoI RGCGCY 1 cut(s) 641
BfuAI ACCTGC 1 cut(s) 864
BglI GCCNNNNNGGC 1 cut(s) 816
BisI GCNGC 6 cut(s) 79, 375, 394, 473, 817, 980
BlsI GCNGC 6 cut(s) 80, 376, 395, 474, 818, 981
Bme1390I CCNGG 5 cut(s) 210, 316, 330, 361, 851
Bme18I GGWCC 3 cut(s) 847, 853, 1091
BmgT120I GGNCC 4 cut(s) 818, 847, 853, 1091
BmiI GGNNCC 3 cut(s) 358, 639, 718
BmrFI CCNGG 5 cut(s) 210, 316, 330, 361, 851
BmsI GCATC 1 cut(s) 103
BpuMI CCSGG 3 cut(s) 316, 330, 361
BsaHI GRCGYC 2 cut(s) 61, 638
BsaJI CCNNGG 8 cut(s) 208, 315, 328, 536, 685, 933, 983, 1167
Bsc4I CCNNNNNNNGG 3 cut(s) 625, 626, 1069
Bse118I RCCGGY 2 cut(s) 377, 859
Bse1I ACTGG 1 cut(s) 718
Bse21I CCTNAGG 1 cut(s) 993
BseBI CCWGG 2 cut(s) 210, 851
BseDI CCNNGG 8 cut(s) 208, 315, 328, 536, 685, 933, 983, 1167
BseGI GGATG 4 cut(s) 325, 511, 546, 1235
BseLI CCNNNNNNNGG 3 cut(s) 625, 626, 1069
BseMII CTCAG 2 cut(s) 749, 1007
BseNI ACTGG 1 cut(s) 718
BseRI GAGGAG 6 cut(s) 176, 179, 256, 259, 262, 560
BseX3I CGGCCG 1 cut(s) 394
BseXI GCAGC 3 cut(s) 65, 484, 966
BseYI CCCAGC 2 cut(s) 550, 1109
Bsh1236I CGCG 3 cut(s) 237, 687, 816
Bsh1285I CGRYCG 2 cut(s) 397, 415
BshFI GGCC 3 cut(s) 104, 396, 819
BshNI GGYRCC 2 cut(s) 637, 716
BsiEI CGRYCG 2 cut(s) 397, 415
BsiSI CCGG 5 cut(s) 315, 330, 361, 378, 860
BslFI GGGAC 2 cut(s) 402, 1126
BslI CCNNNNNNNGG 3 cut(s) 625, 626, 1069
BsmAI GTCTC 3 cut(s) 183, 738, 802
BsmFI GGGAC 2 cut(s) 402, 1126
BsnI GGCC 3 cut(s) 104, 396, 819
Bsp1286I GDGCHC 1 cut(s) 359
Bsp1407I TGTACA 1 cut(s) 183
Bsp143I GATC 3 cut(s) 412, 592, 1249
BspACI CCGC 9 cut(s) 92, 235, 345, 375, 393, 600, 685, 687, 816
BspANI GGCC 3 cut(s) 104, 396, 819
BspCNI CTCAG 2 cut(s) 748, 1006
BspFNI CGCG 3 cut(s) 237, 687, 816
BspLI GGNNCC 3 cut(s) 358, 639, 718
BspMI ACCTGC 1 cut(s) 864
BspPI GGATC 2 cut(s) 587, 1244
BspT107I GGYRCC 2 cut(s) 637, 716
BsrFI RCCGGY 2 cut(s) 377, 859
BsrGI TGTACA 1 cut(s) 183
BsrI ACTGG 1 cut(s) 718
BssAI RCCGGY 2 cut(s) 377, 859
BssECI CCNNGG 8 cut(s) 208, 315, 328, 536, 685, 933, 983, 1167
BssMI GATC 3 cut(s) 412, 592, 1249
BssNI GRCGYC 2 cut(s) 61, 638
BssSI CACGAG 1 cut(s) 477
BssT1I CCWWGG 3 cut(s) 933, 983, 1167
Bst2BI CACGAG 1 cut(s) 477
Bst2UI CCWGG 2 cut(s) 210, 851
Bst4CI ACNGT 1 cut(s) 564
Bst6I CTCTTC 2 cut(s) 128, 805
BstACI GRCGYC 2 cut(s) 61, 638
BstAUI TGTACA 1 cut(s) 183
BstC8I GCNNGC 4 cut(s) 40, 379, 861, 1051
BstDEI CTNAG 4 cut(s) 123, 171, 735, 993
BstDSI CCRYGG 2 cut(s) 536, 685
BstF5I GGATG 4 cut(s) 325, 511, 546, 1235
BstFNI CGCG 3 cut(s) 237, 687, 816
BstH2I RGCGCY 1 cut(s) 641
BstHHI GCGC 2 cut(s) 239, 640
BstKTI GATC 3 cut(s) 415, 595, 1252
BstMAI GTCTC 3 cut(s) 183, 738, 802
BstMBI GATC 3 cut(s) 412, 592, 1249
BstMCI CGRYCG 2 cut(s) 397, 415
BstMWI GCNNNNNNNGC 4 cut(s) 35, 67, 816, 988
BstNI CCWGG 2 cut(s) 210, 851
BstSCI CCNGG 5 cut(s) 208, 314, 328, 359, 849
BstUI CGCG 3 cut(s) 237, 687, 816
BstV1I GCAGC 3 cut(s) 65, 484, 966
BstZI CGGCCG 1 cut(s) 394
Bsu36I CCTNAGG 1 cut(s) 993
BsuRI GGCC 3 cut(s) 104, 396, 819
BtgI CCRYGG 2 cut(s) 536, 685
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 4 cut(s) 325, 511, 546, 1235
BveI ACCTGC 1 cut(s) 864
Cac8I GCNNGC 4 cut(s) 40, 379, 861, 1051
CaiI CAGNNNCTG 1 cut(s) 713
CfoI GCGC 2 cut(s) 239, 640
Cfr10I RCCGGY 2 cut(s) 377, 859
Cfr13I GGNCC 4 cut(s) 818, 847, 853, 1091
Cfr42I CCGCGG 1 cut(s) 688
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 3 cut(s) 112, 184, 1227
CviAII CATG 4 cut(s) 382, 671, 1138, 1201
CviQI GTAC 3 cut(s) 112, 184, 1227
DdeI CTNAG 4 cut(s) 123, 171, 735, 993
DinI GGCGCC 1 cut(s) 639
DpnI GATC 3 cut(s) 414, 594, 1251
DpnII GATC 3 cut(s) 412, 592, 1249
DraIII CACNNNGTG 1 cut(s) 1130
EaeI YGGCCR 1 cut(s) 394
EagI CGGCCG 1 cut(s) 394
Eam1104I CTCTTC 2 cut(s) 128, 805
EarI CTCTTC 2 cut(s) 128, 805
EclXI CGGCCG 1 cut(s) 394
Eco130I CCWWGG 3 cut(s) 933, 983, 1167
Eco24I GRGCYC 1 cut(s) 359
Eco32I GATATC 1 cut(s) 1162
Eco47I GGWCC 3 cut(s) 847, 853, 1091
Eco52I CGGCCG 1 cut(s) 394
Eco57I CTGAAG 2 cut(s) 170, 1275
Eco81I CCTNAGG 1 cut(s) 993
EcoO109I RGGNCCY 1 cut(s) 1091
EcoRII CCWGG 2 cut(s) 208, 849
EcoRV GATATC 1 cut(s) 1162
EcoT14I CCWWGG 3 cut(s) 933, 983, 1167
EcoT38I GRGCYC 1 cut(s) 359
EgeI GGCGCC 1 cut(s) 639
EheI GGCGCC 1 cut(s) 639
ErhI CCWWGG 3 cut(s) 933, 983, 1167
FaeI CATG 4 cut(s) 385, 674, 1141, 1204
FaqI GGGAC 2 cut(s) 402, 1126
FatI CATG 4 cut(s) 381, 670, 1137, 1200
FauI CCCGC 1 cut(s) 607
FauNDI CATATG 2 cut(s) 188, 1261
Fnu4HI GCNGC 6 cut(s) 79, 375, 394, 473, 817, 980
FokI GGATG 4 cut(s) 332, 518, 553, 1222
FriOI GRGCYC 1 cut(s) 359
Fsp4HI GCNGC 6 cut(s) 79, 375, 394, 473, 817, 980
FspBI CTAG 1 cut(s) 26
GlaI GCGC 2 cut(s) 238, 639
GluI GCNGC 6 cut(s) 79, 375, 394, 473, 817, 980
GsaI CCCAGC 2 cut(s) 554, 1113
HaeII RGCGCY 1 cut(s) 641
HaeIII GGCC 3 cut(s) 104, 396, 819
HapII CCGG 5 cut(s) 315, 330, 361, 378, 860
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 2 cut(s) 239, 640
Hin1I GRCGYC 2 cut(s) 61, 638
Hin1II CATG 4 cut(s) 385, 674, 1141, 1204
Hin6I GCGC 2 cut(s) 237, 638
HinP1I GCGC 2 cut(s) 237, 638
HindIII AAGCTT 1 cut(s) 840
HinfI GANTC 2 cut(s) 950, 1114
HpaII CCGG 5 cut(s) 315, 330, 361, 378, 860
HphI GGTGA 2 cut(s) 980, 1156
Hpy166II GTNNAC 2 cut(s) 86, 536
Hpy188I TCNGA 4 cut(s) 253, 277, 772, 1044
Hpy188III TCNNGA 7 cut(s) 419, 479, 737, 947, 995, 1247, 1253
Hpy8I GTNNAC 2 cut(s) 86, 536
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 50, 414
HpyCH4III ACNGT 1 cut(s) 564
HpyCH4IV ACGT 1 cut(s) 667
HpyCH4V TGCA 4 cut(s) 569, 707, 1010, 1053
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 67, 816, 988
HpyF3I CTNAG 4 cut(s) 123, 171, 735, 993
HpySE526I ACGT 1 cut(s) 667
Hsp92I GRCGYC 2 cut(s) 61, 638
Hsp92II CATG 4 cut(s) 385, 674, 1141, 1204
HspAI GCGC 2 cut(s) 237, 638
KasI GGCGCC 1 cut(s) 637
KroI GCCGGC 2 cut(s) 377, 859
KroNI GCCGGC 2 cut(s) 379, 861
KspI CCGCGG 1 cut(s) 688
Kzo9I GATC 3 cut(s) 412, 592, 1249
LmnI GCTCC 2 cut(s) 362, 547
Lsp1109I GCAGC 3 cut(s) 65, 484, 966
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 26
MaeII ACGT 1 cut(s) 667
MaeIII GTNAC 2 cut(s) 191, 709
MalI GATC 3 cut(s) 414, 594, 1251
MboI GATC 3 cut(s) 412, 592, 1249
MhlI GDGCHC 1 cut(s) 359
MluCI AATT 9 cut(s) 290, 492, 623, 1004, 1067, 1148, 1180, 1196, 1220
Mly113I GGCGCC 1 cut(s) 638
MlyI GAGTC 1 cut(s) 1108
MroNI GCCGGC 2 cut(s) 377, 859
MseI TTAA 2 cut(s) 975, 1101
MslI CAYNNNNRTG 2 cut(s) 438, 722
MspA1I CMGCKG 1 cut(s) 687
MspI CCGG 5 cut(s) 315, 330, 361, 378, 860
MspR9I CCNGG 5 cut(s) 210, 316, 330, 361, 851
MvaI CCWGG 2 cut(s) 210, 851
MvnI CGCG 3 cut(s) 237, 687, 816
MwoI GCNNNNNNNGC 4 cut(s) 35, 67, 816, 988
NaeI GCCGGC 2 cut(s) 379, 861
NarI GGCGCC 1 cut(s) 638
NciI CCSGG 3 cut(s) 316, 330, 361
NdeI CATATG 2 cut(s) 188, 1261
NdeII GATC 3 cut(s) 412, 592, 1249
NgoMIV GCCGGC 2 cut(s) 377, 859
NlaIII CATG 4 cut(s) 385, 674, 1141, 1204
NlaIV GGNNCC 3 cut(s) 358, 639, 718
NmuCI GTSAC 1 cut(s) 191
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 417
PdiI GCCGGC 2 cut(s) 379, 861
PfeI GAWTC 1 cut(s) 950
PfoI TCCNGGA 2 cut(s) 359, 849
PkrI GCNGC 6 cut(s) 80, 376, 395, 474, 818, 981
Ple19I CGATCG 1 cut(s) 415
PleI GAGTC 1 cut(s) 1108
PluTI GGCGCC 1 cut(s) 641
PpsI GAGTC 1 cut(s) 1108
PpuMI RGGWCCY 1 cut(s) 1091
PsiI TTATAA 2 cut(s) 309, 1083
Psp5II RGGWCCY 1 cut(s) 1091
Psp6I CCWGG 2 cut(s) 208, 849
PspFI CCCAGC 2 cut(s) 550, 1109
PspGI CCWGG 2 cut(s) 208, 849
PspN4I GGNNCC 3 cut(s) 358, 639, 718
PspPI GGNCC 4 cut(s) 818, 847, 853, 1091
PspPPI RGGWCCY 1 cut(s) 1091
PstNI CAGNNNCTG 1 cut(s) 713
PvuI CGATCG 1 cut(s) 415
RsaI GTAC 3 cut(s) 113, 185, 1228
RsaNI GTAC 3 cut(s) 112, 184, 1227
RseI CAYNNNNRTG 2 cut(s) 438, 722
SacII CCGCGG 1 cut(s) 688
SaqAI TTAA 2 cut(s) 975, 1101
SatI GCNGC 6 cut(s) 79, 375, 394, 473, 817, 980
Sau3AI GATC 3 cut(s) 412, 592, 1249
Sau96I GGNCC 4 cut(s) 818, 847, 853, 1091
SchI GAGTC 1 cut(s) 1108
ScrFI CCNGG 5 cut(s) 210, 316, 330, 361, 851
SduI GDGCHC 1 cut(s) 359
SfaNI GCATC 1 cut(s) 103
SfoI GGCGCC 1 cut(s) 639
Sfr303I CCGCGG 1 cut(s) 688
SgrBI CCGCGG 1 cut(s) 688
SinI GGWCC 3 cut(s) 847, 853, 1091
SmiMI CAYNNNNRTG 2 cut(s) 438, 722
Sse9I AATT 9 cut(s) 290, 492, 623, 1004, 1067, 1148, 1180, 1196, 1220
SsiI CCGC 9 cut(s) 92, 235, 345, 375, 393, 600, 685, 687, 816
SspDI GGCGCC 1 cut(s) 637
SspMI CTAG 1 cut(s) 26
StyD4I CCNGG 5 cut(s) 208, 314, 328, 359, 849
StyI CCWWGG 3 cut(s) 933, 983, 1167
TaaI ACNGT 1 cut(s) 564
TaiI ACGT 1 cut(s) 670
TaqI TCGA 4 cut(s) 73, 411, 615, 762
TasI AATT 9 cut(s) 290, 492, 623, 1004, 1067, 1148, 1180, 1196, 1220
TatI WGTACW 2 cut(s) 111, 183
TauI GCSGC 3 cut(s) 377, 396, 819
TfiI GAWTC 1 cut(s) 950
Tru1I TTAA 2 cut(s) 975, 1101
Tru9I TTAA 2 cut(s) 975, 1101
TseFI GTSAC 1 cut(s) 191
TseI GCWGC 3 cut(s) 78, 472, 979
Tsp45I GTSAC 1 cut(s) 191
TspDTI ATGAA 7 cut(s) 336, 396, 398, 564, 1017, 1019, 1189
TspGWI ACGGA 1 cut(s) 553
VpaK11BI GGWCC 3 cut(s) 847, 853, 1091
XapI RAATTY 2 cut(s) 1004, 1220
XcmI CCANNNNNNNNNTGG 1 cut(s) 783
XspI CTAG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.