Rmu_sc0004526.1_g000002

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004526.1
OG0000213
Physical Location & Seq
Forward (+)
7792 .. 9135
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004526.1_g000002.1.cds

Sequence Viewer

Length: 1344 bp
atgtcccccaaaaactgtctgaacctcgcggccaacagaggcagcgatggtgaagaaaacaggcatcatcggcttcgacatcgccgtatccatggagataagaagcataggcttcatggatgcacggcggcgatgaagaagaagaaaggcaagttgatggagaaggcgaagaagataacaacgaggaagaagaagcttaagttgactgagttggagaccaacaagtcgctgtacatatgtagccttgagcaccacgaggggatgtgggtgtcttatgttgtccgcgccatcaaattgtccgatttgttgtcatcctcctccgatgatgatctgcaattgcggcaactagcttataaggctggtacggatcttcccggatctgtgcgttgtggtgtgatgggctcccaaattgttttcgccggtggcctgaaacccagcgtccctgacggcataggggcaatacgcaccgactcaatttggtatagagatgtttatgcctttgaaacatcggaccccaagcagcagcagcatgaaatcaggaagatggatgccactttacttggagccaagttctccccttggatggtggagctgggcggcaaattgtacgccctttgctatatgggggtgtcccattctccggaatttgaggtatttgaccctaaactgcagacttggtctgctctacctcagcctccatttttccaacatggctctcgatatgacaaccatgctccttttgcttatgcaattgctggcaccaaaatgtttgtctcccatgaattatgtccagtcttctgctttgatgtctcccaaccggactctggatggagactagtccccactatgtgccaaggtggcccttttccttttatcggcacagctttagtcctggacctgccggctgctggtggcaacaagaagaagatattgtttggccatagtgcgcgttgttgttttagtctgggagtttatcttatatcggggttggatgaaaatgaagaatccatcactcaaattggggatttgaaactgccaatatggccttatgagttgggtcccgcagcagcttctgattttgtccacataggaggtcagaaagcctgccttgttatcacccaattcatatcctcactggaagaggaacctagatggaatcagccggggactcataagacacaaggggttgccataccatttcaatttgagattgatatcaccaagctggacaaggatgagaaagattgcttcactctccaattcatgcctcctcgcatcttccaataccagactaacccagccacttatccaagccctgaaacggttggttgctttgtcttgtaa

Protein Analysis

447

Amino Acids

49.96

Weight (kDa)

8.56

Isoelectric Point (pI)

47.03

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 354
AasI GACNNNNNNGTC 1 cut(s) 223
Acc36I ACCTGC 1 cut(s) 906
AccB1I GGYRCC 1 cut(s) 758
AccII CGCG 3 cut(s) 29, 285, 949
AccIII TCCGGA 1 cut(s) 640
AciI CCGC 6 cut(s) 29, 128, 283, 340, 597, 1062
AclWI GGATC 2 cut(s) 375, 385
AcoI YGGCCR 2 cut(s) 30, 937
AcsI RAATTY 1 cut(s) 644
AdeI CACNNNGTG 1 cut(s) 849
AfaI GTAC 3 cut(s) 233, 364, 608
AfiI CCNNNNNNNGG 6 cut(s) 583, 640, 824, 875, 908, 1321
AflII CTTAAG 1 cut(s) 197
AgsI TTSAA 3 cut(s) 503, 1030, 1202
AhlI ACTAGT 1 cut(s) 835
AjnI CCWGG 1 cut(s) 891
AluBI AGCT 6 cut(s) 196, 350, 592, 884, 1070, 1225
AluI AGCT 6 cut(s) 196, 350, 592, 884, 1070, 1225
Alw21I GWGCWC 1 cut(s) 252
Alw26I GTCTC 4 cut(s) 209, 778, 814, 826
AlwI GGATC 2 cut(s) 375, 385
AlwNI CAGNNNCTG 1 cut(s) 1073
Aor13HI TCCGGA 1 cut(s) 640
AoxI GGCC 5 cut(s) 30, 424, 859, 937, 1043
ApeKI GCWGC 7 cut(s) 42, 520, 523, 526, 905, 1064, 1067
ApoI RAATTY 1 cut(s) 644
ArsI GACNNNNNNTTYG 2 cut(s) 756, 788
AspLEI GCGC 2 cut(s) 287, 949
AspS9I GGNCC 4 cut(s) 511, 860, 895, 1058
AsuC2I CCSGG 2 cut(s) 375, 1164
AsuHPI GGTGA 3 cut(s) 62, 1108, 1210
AvaII GGWCC 3 cut(s) 511, 895, 1058
BalI TGGCCA 1 cut(s) 939
BanI GGYRCC 1 cut(s) 758
BanII GRGCYC 1 cut(s) 404
BauI CACGAG 1 cut(s) 254
BbsI GAAGAC 1 cut(s) 787
Bbv12I GWGCWC 1 cut(s) 252
BbvCI CCTCAGC 1 cut(s) 690
BbvI GCAGC 7 cut(s) 54, 532, 535, 538, 892, 1076, 1079
BccI CCATC 9 cut(s) 41, 151, 296, 391, 538, 577, 822, 1016, 1146
BceAI ACGGC 3 cut(s) 69, 141, 463
BciT130I CCWGG 1 cut(s) 893
BciVI GTATCC 1 cut(s) 98
BcnI CCSGG 2 cut(s) 375, 1164
BcoDI GTCTC 4 cut(s) 209, 778, 814, 826
BcuI ACTAGT 1 cut(s) 835
BfaI CTAG 3 cut(s) 347, 836, 1149
BfmI CTRYAG 1 cut(s) 668
BfrI CTTAAG 1 cut(s) 197
BfuAI ACCTGC 1 cut(s) 906
BfuI GTATCC 1 cut(s) 98
BglI GCCNNNNNGGC 2 cut(s) 858, 1042
Bme1390I CCNGG 3 cut(s) 375, 893, 1164
Bme18I GGWCC 3 cut(s) 511, 895, 1058
BmgT120I GGNCC 4 cut(s) 511, 860, 895, 1058
BmiI GGNNCC 7 cut(s) 403, 513, 565, 760, 1059, 1060, 1146
BmrFI CCNGG 3 cut(s) 375, 893, 1164
BmsI GCATC 4 cut(s) 73, 110, 538, 1284
BpiI GAAGAC 1 cut(s) 787
Bpu10I CCTNAGC 1 cut(s) 690
BpuEI CTTGAG 1 cut(s) 266
BpuMI CCSGG 2 cut(s) 375, 1164
BsaBI GATNNNNATC 2 cut(s) 327, 1214
BsaI GGTCTC 1 cut(s) 209
BsaJI CCNNGG 4 cut(s) 91, 578, 853, 1163
BsaWI WCCGGW 2 cut(s) 640, 817
Bsc4I CCNNNNNNNGG 6 cut(s) 583, 640, 824, 875, 908, 1321
Bse118I RCCGGY 2 cut(s) 419, 901
Bse1I ACTGG 2 cut(s) 791, 1140
Bse8I GATNNNNATC 2 cut(s) 327, 1214
BseAI TCCGGA 1 cut(s) 640
BseBI CCWGG 1 cut(s) 893
BseDI CCNNGG 4 cut(s) 91, 578, 853, 1163
BseGI GGATG 8 cut(s) 125, 267, 311, 553, 588, 833, 997, 1240
BseJI GATNNNNATC 2 cut(s) 327, 1214
BseLI CCNNNNNNNGG 6 cut(s) 583, 640, 824, 875, 908, 1321
BseMII CTCAG 2 cut(s) 198, 704
BseNI ACTGG 2 cut(s) 791, 1140
BseRI GAGGAG 2 cut(s) 307, 1260
BseXI GCAGC 7 cut(s) 54, 532, 535, 538, 892, 1076, 1079
BseYI CCCAGC 3 cut(s) 434, 592, 1297
Bsh1236I CGCG 3 cut(s) 29, 285, 949
BshFI GGCC 5 cut(s) 32, 426, 861, 939, 1045
BshNI GGYRCC 1 cut(s) 758
BsiHKAI GWGCWC 1 cut(s) 252
BsiSI CCGG 6 cut(s) 375, 420, 641, 818, 902, 1163
BslFI GGGAC 5 cut(s) 425, 616, 824, 1044, 1180
BslI CCNNNNNNNGG 6 cut(s) 583, 640, 824, 875, 908, 1321
BsmAI GTCTC 4 cut(s) 209, 778, 814, 826
BsmFI GGGAC 5 cut(s) 425, 616, 824, 1044, 1180
BsnI GGCC 5 cut(s) 32, 426, 861, 939, 1045
Bso31I GGTCTC 1 cut(s) 209
Bsp1286I GDGCHC 2 cut(s) 252, 404
Bsp13I TCCGGA 1 cut(s) 640
Bsp1407I TGTACA 1 cut(s) 231
Bsp143I GATC 3 cut(s) 328, 367, 377
Bsp19I CCATGG 1 cut(s) 91
BspACI CCGC 6 cut(s) 29, 128, 283, 340, 597, 1062
BspANI GGCC 5 cut(s) 32, 426, 861, 939, 1045
BspCNI CTCAG 2 cut(s) 199, 703
BspEI TCCGGA 1 cut(s) 640
BspFNI CGCG 3 cut(s) 29, 285, 949
BspLI GGNNCC 7 cut(s) 403, 513, 565, 760, 1059, 1060, 1146
BspMAI CTGCAG 1 cut(s) 672
BspMI ACCTGC 1 cut(s) 906
BspPI GGATC 2 cut(s) 375, 385
BspT107I GGYRCC 1 cut(s) 758
BspTI CTTAAG 1 cut(s) 197
BspTNI GGTCTC 1 cut(s) 209
BsrFI RCCGGY 2 cut(s) 419, 901
BsrGI TGTACA 1 cut(s) 231
BsrI ACTGG 2 cut(s) 791, 1140
BssAI RCCGGY 2 cut(s) 419, 901
BssECI CCNNGG 4 cut(s) 91, 578, 853, 1163
BssMI GATC 3 cut(s) 328, 367, 377
BssSI CACGAG 1 cut(s) 254
BssT1I CCWWGG 3 cut(s) 91, 578, 853
Bst2BI CACGAG 1 cut(s) 254
Bst2UI CCWGG 1 cut(s) 893
Bst4CI ACNGT 2 cut(s) 17, 1324
Bst6I CTCTTC 1 cut(s) 1134
BstAFI CTTAAG 1 cut(s) 197
BstAUI TGTACA 1 cut(s) 231
BstC8I GCNNGC 3 cut(s) 757, 903, 1105
BstDEI CTNAG 2 cut(s) 207, 690
BstDSI CCRYGG 1 cut(s) 91
BstF5I GGATG 8 cut(s) 125, 267, 311, 553, 588, 833, 997, 1240
BstFNI CGCG 3 cut(s) 29, 285, 949
BstHHI GCGC 2 cut(s) 287, 949
BstKTI GATC 3 cut(s) 331, 370, 380
BstMAI GTCTC 4 cut(s) 209, 778, 814, 826
BstMBI GATC 3 cut(s) 328, 367, 377
BstMWI GCNNNNNNNGC 7 cut(s) 70, 340, 356, 526, 740, 858, 1042
BstNI CCWGG 1 cut(s) 893
BstSCI CCNGG 3 cut(s) 373, 891, 1162
BstSFI CTRYAG 1 cut(s) 668
BstUI CGCG 3 cut(s) 29, 285, 949
BstV1I GCAGC 7 cut(s) 54, 532, 535, 538, 892, 1076, 1079
BstV2I GAAGAC 1 cut(s) 787
BstX2I RGATCY 2 cut(s) 367, 377
BstYI RGATCY 2 cut(s) 367, 377
BsuI GTATCC 1 cut(s) 98
BsuRI GGCC 5 cut(s) 32, 426, 861, 939, 1045
BtgI CCRYGG 1 cut(s) 91
BtgZI GCGATG 3 cut(s) 60, 65, 146
BtsCI GGATG 8 cut(s) 125, 267, 311, 553, 588, 833, 997, 1240
BtsIMutI CAGTG 1 cut(s) 1133
BveI ACCTGC 1 cut(s) 906
Cac8I GCNNGC 3 cut(s) 757, 903, 1105
CaiI CAGNNNCTG 1 cut(s) 1073
CfoI GCGC 2 cut(s) 287, 949
Cfr10I RCCGGY 2 cut(s) 419, 901
Cfr13I GGNCC 4 cut(s) 511, 860, 895, 1058
CseI GACGC 1 cut(s) 427
Csp6I GTAC 3 cut(s) 232, 363, 607
CspCI CAANNNNNGTGG 2 cut(s) 541, 576
CviAII CATG 7 cut(s) 92, 116, 530, 710, 731, 779, 1264
CviQI GTAC 3 cut(s) 232, 363, 607
DdeI CTNAG 2 cut(s) 207, 690
DpnI GATC 3 cut(s) 330, 369, 379
DpnII GATC 3 cut(s) 328, 367, 377
DraIII CACNNNGTG 1 cut(s) 849
DrdI GACNNNNNNGTC 1 cut(s) 223
DseDI GACNNNNNNGTC 1 cut(s) 223
EaeI YGGCCR 2 cut(s) 30, 937
Eam1104I CTCTTC 1 cut(s) 1134
EarI CTCTTC 1 cut(s) 1134
Eco130I CCWWGG 3 cut(s) 91, 578, 853
Eco24I GRGCYC 1 cut(s) 404
Eco31I GGTCTC 1 cut(s) 209
Eco32I GATATC 1 cut(s) 1216
Eco47I GGWCC 3 cut(s) 511, 895, 1058
EcoO109I RGGNCCY 1 cut(s) 1058
EcoRII CCWGG 1 cut(s) 891
EcoRV GATATC 1 cut(s) 1216
EcoT14I CCWWGG 3 cut(s) 91, 578, 853
EcoT38I GRGCYC 1 cut(s) 404
ErhI CCWWGG 3 cut(s) 91, 578, 853
FaeI CATG 7 cut(s) 95, 119, 533, 713, 734, 782, 1267
FalI AAGNNNNNCTT 2 cut(s) 1092, 1124
FaqI GGGAC 5 cut(s) 425, 616, 824, 1044, 1180
FatI CATG 7 cut(s) 91, 115, 529, 709, 730, 778, 1263
FauI CCCGC 1 cut(s) 1069
FauNDI CATATG 1 cut(s) 236
FokI GGATG 8 cut(s) 132, 274, 298, 560, 595, 840, 1004, 1247
FriOI GRGCYC 1 cut(s) 404
FspBI CTAG 3 cut(s) 347, 836, 1149
GlaI GCGC 2 cut(s) 286, 948
GsaI CCCAGC 3 cut(s) 438, 596, 1301
HaeIII GGCC 5 cut(s) 32, 426, 861, 939, 1045
HapII CCGG 6 cut(s) 375, 420, 641, 818, 902, 1163
HgaI GACGC 1 cut(s) 427
HhaI GCGC 2 cut(s) 287, 949
Hin1II CATG 7 cut(s) 95, 119, 533, 713, 734, 782, 1267
Hin6I GCGC 2 cut(s) 285, 947
HinP1I GCGC 2 cut(s) 285, 947
HincII GTYRAC 1 cut(s) 204
HindII GTYRAC 1 cut(s) 204
HindIII AAGCTT 1 cut(s) 194
HinfI GANTC 5 cut(s) 470, 821, 1004, 1156, 1168
HpaII CCGG 6 cut(s) 375, 420, 641, 818, 902, 1163
HphI GGTGA 3 cut(s) 62, 1108, 1210
Hpy166II GTNNAC 2 cut(s) 204, 1084
Hpy188I TCNGA 6 cut(s) 21, 301, 322, 511, 1075, 1098
Hpy188III TCNNGA 4 cut(s) 538, 641, 717, 825
Hpy8I GTNNAC 2 cut(s) 204, 1084
HpyAV CCTTC 1 cut(s) 157
HpyCH4III ACNGT 2 cut(s) 17, 1324
HpyCH4V TGCA 4 cut(s) 123, 334, 670, 749
HpyF10VI GCNNNNNNNGC 7 cut(s) 70, 340, 356, 526, 740, 858, 1042
HpyF3I CTNAG 2 cut(s) 207, 690
Hsp92II CATG 7 cut(s) 95, 119, 533, 713, 734, 782, 1267
HspAI GCGC 2 cut(s) 285, 947
KflI GGGWCCC 1 cut(s) 1058
Kpn2I TCCGGA 1 cut(s) 640
KroI GCCGGC 1 cut(s) 901
KroNI GCCGGC 1 cut(s) 903
Kzo9I GATC 3 cut(s) 328, 367, 377
LmnI GCTCC 4 cut(s) 407, 563, 589, 739
Lsp1109I GCAGC 7 cut(s) 54, 532, 535, 538, 892, 1076, 1079
LweI GCATC 4 cut(s) 73, 110, 538, 1284
MaeI CTAG 3 cut(s) 347, 836, 1149
MalI GATC 3 cut(s) 330, 369, 379
MboI GATC 3 cut(s) 328, 367, 377
MfeI CAATTG 2 cut(s) 335, 750
MflI RGATCY 2 cut(s) 367, 377
MhlI GDGCHC 2 cut(s) 252, 404
MlsI TGGCCA 1 cut(s) 939
MluNI TGGCCA 1 cut(s) 939
MlyI GAGTC 3 cut(s) 464, 815, 1162
MmeI TCCRAC 3 cut(s) 192, 730, 969
Mox20I TGGCCA 1 cut(s) 939
MroI TCCGGA 1 cut(s) 640
MroNI GCCGGC 1 cut(s) 901
MscI TGGCCA 1 cut(s) 939
MseI TTAA 1 cut(s) 198
MslI CAYNNNNRTG 1 cut(s) 764
Msp20I TGGCCA 1 cut(s) 939
MspCI CTTAAG 1 cut(s) 197
MspI CCGG 6 cut(s) 375, 420, 641, 818, 902, 1163
MspR9I CCNGG 3 cut(s) 375, 893, 1164
MunI CAATTG 2 cut(s) 335, 750
MvaI CCWGG 1 cut(s) 893
MvnI CGCG 3 cut(s) 29, 285, 949
MwoI GCNNNNNNNGC 7 cut(s) 70, 340, 356, 526, 740, 858, 1042
NaeI GCCGGC 1 cut(s) 903
NciI CCSGG 2 cut(s) 375, 1164
NcoI CCATGG 1 cut(s) 91
NdeI CATATG 1 cut(s) 236
NdeII GATC 3 cut(s) 328, 367, 377
NgoMIV GCCGGC 1 cut(s) 901
NlaIII CATG 7 cut(s) 95, 119, 533, 713, 734, 782, 1267
NlaIV GGNNCC 7 cut(s) 403, 513, 565, 760, 1059, 1060, 1146
PcsI WCGNNNNNNNCGW 1 cut(s) 82
PdiI GCCGGC 1 cut(s) 903
PfeI GAWTC 2 cut(s) 1004, 1156
PflFI GACNNNGTC 1 cut(s) 676
PfoI TCCNGGA 2 cut(s) 373, 891
PleI GAGTC 3 cut(s) 464, 815, 1162
PpsI GAGTC 3 cut(s) 464, 815, 1162
PpuMI RGGWCCY 1 cut(s) 1058
PsiI TTATAA 1 cut(s) 354
Psp5II RGGWCCY 1 cut(s) 1058
Psp6I CCWGG 1 cut(s) 891
PspFI CCCAGC 3 cut(s) 434, 592, 1297
PspGI CCWGG 1 cut(s) 891
PspN4I GGNNCC 7 cut(s) 403, 513, 565, 760, 1059, 1060, 1146
PspPI GGNCC 4 cut(s) 511, 860, 895, 1058
PspPPI RGGWCCY 1 cut(s) 1058
PstI CTGCAG 1 cut(s) 672
PstNI CAGNNNCTG 1 cut(s) 1073
PsuI RGATCY 2 cut(s) 367, 377
PsyI GACNNNGTC 1 cut(s) 676
RsaI GTAC 3 cut(s) 233, 364, 608
RsaNI GTAC 3 cut(s) 232, 363, 607
RseI CAYNNNNRTG 1 cut(s) 764
SaqAI TTAA 1 cut(s) 198
Sau3AI GATC 3 cut(s) 328, 367, 377
Sau96I GGNCC 4 cut(s) 511, 860, 895, 1058
SchI GAGTC 3 cut(s) 464, 815, 1162
ScrFI CCNGG 3 cut(s) 375, 893, 1164
SduI GDGCHC 2 cut(s) 252, 404
SfaNI GCATC 4 cut(s) 73, 110, 538, 1284
SfcI CTRYAG 1 cut(s) 668
SgrAI CRCCGGYG 1 cut(s) 419
SinI GGWCC 3 cut(s) 511, 895, 1058
SmiMI CAYNNNNRTG 1 cut(s) 764
SmlI CTYRAG 2 cut(s) 197, 245
SmoI CTYRAG 2 cut(s) 197, 245
SpeI ACTAGT 1 cut(s) 835
SsiI CCGC 6 cut(s) 29, 128, 283, 340, 597, 1062
SspMI CTAG 3 cut(s) 347, 836, 1149
StyD4I CCNGG 3 cut(s) 373, 891, 1162
StyI CCWWGG 3 cut(s) 91, 578, 853
TaaI ACNGT 2 cut(s) 17, 1324
TaqI TCGA 2 cut(s) 76, 718
TatI WGTACW 1 cut(s) 231
TauI GCSGC 4 cut(s) 32, 131, 343, 600
TfiI GAWTC 2 cut(s) 1004, 1156
Tru1I TTAA 1 cut(s) 198
Tru9I TTAA 1 cut(s) 198
TscAI CASTG 1 cut(s) 1140
TseI GCWGC 7 cut(s) 42, 520, 523, 526, 905, 1064, 1067
TspDTI ATGAA 8 cut(s) 104, 149, 546, 795, 1008, 1014, 1114, 1252
TspGWI ACGGA 1 cut(s) 380
TspRI CASTG 1 cut(s) 1140
Tth111I GACNNNGTC 1 cut(s) 676
Vha464I CTTAAG 1 cut(s) 197
VpaK11BI GGWCC 3 cut(s) 511, 895, 1058
XapI RAATTY 1 cut(s) 644
XcmI CCANNNNNNNNNTGG 1 cut(s) 821
XspI CTAG 3 cut(s) 347, 836, 1149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.