FvH4_5g09240

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb5
OG0000213
Physical Location & Seq
Reverse (-)
5324892 .. 5328009
3118 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_5g09240.t1

Sequence Viewer

Length: 1290 bp
ATGTCCCCCAAAAGATCTCGAACCCTAGCCACCAGCCACCGCGTCGAAGAAAGGCATCGGGACGAGCGTCGGCACCGGCAGCGGGACGAGCGTCGGCACCGGCATCAGGACGAGCGTCGGCATCGGCGGAAGGTGAGGAAGACATCGAACAAGTTGAAGTTGGAGTTAGATGAGGAGGAAGCAAACAAGTCACTTTACCTATGTTACCTTGAACAGAGCGGAGATTGCGTTGCTTATGTAATCCGCGCCGTCAGATTGTCCGATTTGTTGTCGTCCGAGAAGCCATCGAGATTACGGCAAGTGGGTTTTAAGGCCGGGGACCATCTCCCCGGAAGTGTAGGTTCCGGTGTTATGGGCTCCCAAATTCTTCTAGCCGGCGGGTTGAGACCCAACATCCCTTATGGGATTGGAGCACATATGCTTCCCTCAGCTGTTTGGCATAGAAATGTTTATGCCTTTGAAACTGACCCCAATAAGCAACCTCGTCCTTCAATCAGGAAGCTTGATGCCACTTTACAAGGTGCCAAATTGGGCCCTATGATGGTGGAGCTTGGGGGCAAATTGTACGCTCTTTCGTATTATCTGGTTGGCAACCCTCCCTCGTTTGAGGTGTTTGATCCCAAAATGGGAACTTGGTCTGCTCTGCCACAGCCCCCATTTTTCCAACCTCTCTCTGAATATTTCGAATACGCTCCCTTCTCTTATGCATTTACCGGCACCAAGATGTTTGTGTCCCATGAACAATGTCCTGTGTTCTGTTTTGACGTCGCGCACCCGGATAGAGAATGGAGACTAGTCCCTACTATGTGTCAAGGCGGCCCTTTTCCATTTGCTGGTGTGTCTTTGGTCCTGGACCTGCCGGAACCTGACAAGAAGATAGTGTTTGCCTATAGTCACGATCGTTGGTGTTTAGGAGTTTATGTCATGTCATTGTGTGAAAACCAAGAGTCTATCACACGGATTGGTGATTTGAAGCTGCCGCGGTTGCCTTATGAATTGGGTGAAGCAACTGGCTGTGATTTTGTCCACATAGGAGGTCGGAAAGCCTGCATTGTTGTCCCCGAATTGGAGCCCCCCTGTGATGATGAAGGAGGAGACGAATTGGAGCTCGGGTCTCATAAGACATTGGGGGTTGCCATACCATTTCAGTTTGAAGTTGATATGACTAAGCTGGACAAGGACAAGAAAAATTGCTTCACCCTCCAATTCATGCCTATTCGCATCTTCGAATTTCATACCACTCCATCCACTCTTCCTGACCCCGAATCTGTTGGTAGCTATCTACTGTAG

Protein Analysis

430

Amino Acids

48.69

Weight (kDa)

7.23

Isoelectric Point (pI)

55.51

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 172 - 352 4.4e-10 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 768
Acc36I ACCTGC 1 cut(s) 864
AccB1I GGYRCC 4 cut(s) 72, 96, 521, 716
AccB7I CCANNNNNTGG 1 cut(s) 833
AccBSI CCGCTC 1 cut(s) 219
AccII CGCG 4 cut(s) 42, 246, 770, 982
AciI CCGC 9 cut(s) 40, 82, 127, 219, 244, 378, 816, 980, 982
AclWI GGATC 1 cut(s) 611
AcsI RAATTY 2 cut(s) 363, 1229
AcyI GRCGYC 1 cut(s) 765
AfaI GTAC 1 cut(s) 566
AfiI CCNNNNNNNGG 6 cut(s) 82, 106, 541, 626, 833, 1066
AgsI TTSAA 6 cut(s) 157, 212, 461, 492, 973, 1154
AhlI ACTAGT 1 cut(s) 793
AjnI CCWGG 1 cut(s) 849
AluBI AGCT 7 cut(s) 431, 502, 550, 976, 1108, 1171, 1278
AluI AGCT 7 cut(s) 431, 502, 550, 976, 1108, 1171, 1278
Alw21I GWGCWC 2 cut(s) 415, 1110
Alw26I GTCTC 4 cut(s) 379, 784, 1089, 1119
AlwI GGATC 1 cut(s) 611
Ama87I CYCGRG 1 cut(s) 1109
AoxI GGCC 3 cut(s) 312, 532, 817
ApaI GGGCCC 1 cut(s) 536
ApeKI GCWGC 2 cut(s) 79, 976
ApoI RAATTY 2 cut(s) 363, 1229
AspLEI GCGC 2 cut(s) 248, 772
AspS9I GGNCC 6 cut(s) 319, 532, 533, 818, 847, 853
AsuC2I CCSGG 3 cut(s) 316, 330, 776
AsuHPI GGTGA 4 cut(s) 145, 977, 1013, 1189
AsuII TTCGAA 2 cut(s) 684, 1227
AvaI CYCGRG 1 cut(s) 1109
AvaII GGWCC 3 cut(s) 319, 847, 853
BaeGI GKGCMC 1 cut(s) 536
BanI GGYRCC 4 cut(s) 72, 96, 521, 716
BanII GRGCYC 4 cut(s) 359, 536, 1074, 1110
BbsI GAAGAC 1 cut(s) 146
Bbv12I GWGCWC 2 cut(s) 415, 1110
BbvCI CCTCAGC 1 cut(s) 427
BbvI GCAGC 2 cut(s) 91, 963
BccI CCATC 4 cut(s) 292, 330, 535, 1252
BceAI ACGGC 2 cut(s) 233, 311
BciT130I CCWGG 1 cut(s) 851
BcnI CCSGG 3 cut(s) 316, 330, 776
BcoDI GTCTC 4 cut(s) 379, 784, 1089, 1119
BcuI ACTAGT 1 cut(s) 793
BfaI CTAG 3 cut(s) 26, 371, 794
BfmI CTRYAG 2 cut(s) 889, 1286
BfuAI ACCTGC 1 cut(s) 864
BglII AGATCT 1 cut(s) 14
BisI GCNGC 4 cut(s) 80, 817, 977, 980
BlsI GCNGC 4 cut(s) 81, 818, 978, 981
Bme1390I CCNGG 4 cut(s) 316, 330, 776, 851
Bme18I GGWCC 3 cut(s) 319, 847, 853
BmeT110I CYCGRG 1 cut(s) 1109
BmgT120I GGNCC 6 cut(s) 319, 532, 533, 818, 847, 853
BmrFI CCNGG 4 cut(s) 316, 330, 776, 851
BmsI GCATC 5 cut(s) 64, 112, 130, 496, 1230
BoxI GACNNNNGTC 3 cut(s) 66, 90, 114
BpiI GAAGAC 1 cut(s) 146
Bpu10I CCTNAGC 1 cut(s) 427
Bpu14I TTCGAA 2 cut(s) 684, 1227
BpuMI CCSGG 3 cut(s) 316, 330, 776
BsaHI GRCGYC 1 cut(s) 765
BsaI GGTCTC 2 cut(s) 379, 1119
BsaJI CCNNGG 3 cut(s) 315, 328, 980
BsaWI WCCGGW 1 cut(s) 344
BsaXI ACNNNNNCTCC 6 cut(s) 213, 243, 906, 936, 1097, 1127
Bsc4I CCNNNNNNNGG 6 cut(s) 82, 106, 541, 626, 833, 1066
Bse118I RCCGGY 4 cut(s) 75, 99, 374, 713
Bse1I ACTGG 1 cut(s) 1015
BseBI CCWGG 1 cut(s) 851
BseDI CCNNGG 3 cut(s) 315, 328, 980
BseGI GGATG 2 cut(s) 393, 1244
BseLI CCNNNNNNNGG 6 cut(s) 82, 106, 541, 626, 833, 1066
BseMII CTCAG 1 cut(s) 441
BseNI ACTGG 1 cut(s) 1015
BseRI GAGGAG 2 cut(s) 188, 1107
BseSI GKGCMC 1 cut(s) 536
BseXI GCAGC 2 cut(s) 91, 963
Bsh1236I CGCG 4 cut(s) 42, 246, 770, 982
Bsh1285I CGRYCG 1 cut(s) 901
BshFI GGCC 3 cut(s) 314, 534, 819
BshNI GGYRCC 4 cut(s) 72, 96, 521, 716
BsiEI CGRYCG 1 cut(s) 901
BsiHKAI GWGCWC 2 cut(s) 415, 1110
BsiHKCI CYCGRG 1 cut(s) 1109
BsiSI CCGG 9 cut(s) 76, 100, 315, 330, 345, 375, 714, 776, 860
BslFI GGGAC 6 cut(s) 74, 98, 332, 718, 782, 1043
BslI CCNNNNNNNGG 6 cut(s) 82, 106, 541, 626, 833, 1066
BsmAI GTCTC 4 cut(s) 379, 784, 1089, 1119
BsmBI CGTCTC 1 cut(s) 1089
BsmFI GGGAC 6 cut(s) 74, 98, 332, 718, 782, 1043
BsnI GGCC 3 cut(s) 314, 534, 819
Bso31I GGTCTC 2 cut(s) 379, 1119
BsoBI CYCGRG 1 cut(s) 1109
Bsp119I TTCGAA 2 cut(s) 684, 1227
Bsp120I GGGCCC 1 cut(s) 532
Bsp1286I GDGCHC 5 cut(s) 359, 415, 536, 1074, 1110
Bsp143I GATC 3 cut(s) 14, 616, 898
BspACI CCGC 9 cut(s) 40, 82, 127, 219, 244, 378, 816, 980, 982
BspANI GGCC 3 cut(s) 314, 534, 819
BspCNI CTCAG 1 cut(s) 440
BspFNI CGCG 4 cut(s) 42, 246, 770, 982
BspMI ACCTGC 1 cut(s) 864
BspPI GGATC 1 cut(s) 611
BspT104I TTCGAA 2 cut(s) 684, 1227
BspT107I GGYRCC 4 cut(s) 72, 96, 521, 716
BspTNI GGTCTC 2 cut(s) 379, 1119
BsrBI CCGCTC 1 cut(s) 219
BsrFI RCCGGY 4 cut(s) 75, 99, 374, 713
BsrI ACTGG 1 cut(s) 1015
BssAI RCCGGY 4 cut(s) 75, 99, 374, 713
BssECI CCNNGG 3 cut(s) 315, 328, 980
BssMI GATC 3 cut(s) 14, 616, 898
BssNI GRCGYC 1 cut(s) 765
Bst2UI CCWGG 1 cut(s) 851
Bst4CI ACNGT 1 cut(s) 1287
Bst6I CTCTTC 1 cut(s) 1257
BstACI GRCGYC 1 cut(s) 765
BstBI TTCGAA 2 cut(s) 684, 1227
BstC8I GCNNGC 2 cut(s) 376, 1048
BstDEI CTNAG 2 cut(s) 427, 1167
BstDSI CCRYGG 1 cut(s) 980
BstF5I GGATG 2 cut(s) 393, 1244
BstFNI CGCG 4 cut(s) 42, 246, 770, 982
BstHHI GCGC 2 cut(s) 248, 772
BstKTI GATC 3 cut(s) 17, 619, 901
BstMAI GTCTC 4 cut(s) 379, 784, 1089, 1119
BstMBI GATC 3 cut(s) 14, 616, 898
BstMCI CGRYCG 1 cut(s) 901
BstMWI GCNNNNNNNGC 4 cut(s) 79, 88, 225, 985
BstNI CCWGG 1 cut(s) 851
BstPAI GACNNNNGTC 3 cut(s) 66, 90, 114
BstSCI CCNGG 4 cut(s) 314, 328, 774, 849
BstSFI CTRYAG 2 cut(s) 889, 1286
BstSLI GKGCMC 1 cut(s) 536
BstUI CGCG 4 cut(s) 42, 246, 770, 982
BstV1I GCAGC 2 cut(s) 91, 963
BstV2I GAAGAC 1 cut(s) 146
BstX2I RGATCY 1 cut(s) 14
BstYI RGATCY 1 cut(s) 14
BsuRI GGCC 3 cut(s) 314, 534, 819
BtgI CCRYGG 1 cut(s) 980
BtsCI GGATG 2 cut(s) 393, 1244
BveI ACCTGC 1 cut(s) 864
Cac8I GCNNGC 2 cut(s) 376, 1048
CfoI GCGC 2 cut(s) 248, 772
Cfr10I RCCGGY 4 cut(s) 75, 99, 374, 713
Cfr13I GGNCC 6 cut(s) 319, 532, 533, 818, 847, 853
Cfr42I CCGCGG 1 cut(s) 983
CseI GACGC 4 cut(s) 31, 56, 80, 104
Csp6I GTAC 1 cut(s) 565
CviAII CATG 3 cut(s) 737, 925, 1210
CviQI GTAC 1 cut(s) 565
DdeI CTNAG 2 cut(s) 427, 1167
DpnI GATC 3 cut(s) 16, 618, 900
DpnII GATC 3 cut(s) 14, 616, 898
Eam1104I CTCTTC 1 cut(s) 1257
EarI CTCTTC 1 cut(s) 1257
EciI GGCGGA 1 cut(s) 142
Ecl136II GAGCTC 1 cut(s) 1108
Eco24I GRGCYC 4 cut(s) 359, 536, 1074, 1110
Eco31I GGTCTC 2 cut(s) 379, 1119
Eco47I GGWCC 3 cut(s) 319, 847, 853
Eco53kI GAGCTC 1 cut(s) 1108
Eco88I CYCGRG 1 cut(s) 1109
EcoICRI GAGCTC 1 cut(s) 1108
EcoO109I RGGNCCY 1 cut(s) 533
EcoRII CCWGG 1 cut(s) 849
EcoT22I ATGCAT 1 cut(s) 709
EcoT38I GRGCYC 4 cut(s) 359, 536, 1074, 1110
Esp3I CGTCTC 1 cut(s) 1089
FaeI CATG 3 cut(s) 740, 928, 1213
FaqI GGGAC 6 cut(s) 74, 98, 332, 718, 782, 1043
FatI CATG 3 cut(s) 736, 924, 1209
FauI CCCGC 2 cut(s) 75, 371
FauNDI CATATG 1 cut(s) 417
Fnu4HI GCNGC 4 cut(s) 80, 817, 977, 980
FokI GGATG 2 cut(s) 380, 1231
FriOI GRGCYC 4 cut(s) 359, 536, 1074, 1110
Fsp4HI GCNGC 4 cut(s) 80, 817, 977, 980
FspBI CTAG 3 cut(s) 26, 371, 794
GlaI GCGC 2 cut(s) 247, 771
GluI GCNGC 4 cut(s) 80, 817, 977, 980
HaeIII GGCC 3 cut(s) 314, 534, 819
HapII CCGG 9 cut(s) 76, 100, 315, 330, 345, 375, 714, 776, 860
HgaI GACGC 4 cut(s) 31, 56, 80, 104
HhaI GCGC 2 cut(s) 248, 772
Hin1I GRCGYC 1 cut(s) 765
Hin1II CATG 3 cut(s) 740, 928, 1213
Hin6I GCGC 2 cut(s) 246, 770
HinP1I GCGC 2 cut(s) 246, 770
HindIII AAGCTT 1 cut(s) 500
HinfI GANTC 2 cut(s) 947, 1265
HpaII CCGG 9 cut(s) 76, 100, 315, 330, 345, 375, 714, 776, 860
HphI GGTGA 4 cut(s) 145, 977, 1013, 1189
Hpy166II GTNNAC 1 cut(s) 1027
Hpy188I TCNGA 5 cut(s) 254, 262, 277, 676, 1041
Hpy188III TCNNGA 7 cut(s) 18, 59, 107, 288, 496, 896, 1256
Hpy8I GTNNAC 1 cut(s) 1027
Hpy99I CGWCG 5 cut(s) 47, 72, 96, 120, 770
HpyAV CCTTC 4 cut(s) 124, 498, 706, 1082
HpyCH4III ACNGT 1 cut(s) 1287
HpyCH4IV ACGT 1 cut(s) 765
HpyCH4V TGCA 2 cut(s) 707, 1050
HpyF10VI GCNNNNNNNGC 4 cut(s) 79, 88, 225, 985
HpyF3I CTNAG 2 cut(s) 427, 1167
HpySE526I ACGT 1 cut(s) 765
Hsp92I GRCGYC 1 cut(s) 765
Hsp92II CATG 3 cut(s) 740, 928, 1213
HspAI GCGC 2 cut(s) 246, 770
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
KspI CCGCGG 1 cut(s) 983
Kzo9I GATC 3 cut(s) 14, 616, 898
LmnI GCTCC 6 cut(s) 362, 410, 547, 697, 1069, 1105
Lsp1109I GCAGC 2 cut(s) 91, 963
LweI GCATC 5 cut(s) 64, 112, 130, 496, 1230
MaeI CTAG 3 cut(s) 26, 371, 794
MaeII ACGT 1 cut(s) 765
MaeIII GTNAC 3 cut(s) 189, 203, 893
MalI GATC 3 cut(s) 16, 618, 900
MbiI CCGCTC 1 cut(s) 219
MboI GATC 3 cut(s) 14, 616, 898
MboII GAAGA 6 cut(s) 59, 151, 359, 886, 1216, 1244
MflI RGATCY 1 cut(s) 14
MhlI GDGCHC 5 cut(s) 359, 415, 536, 1074, 1110
MluCI AATT 9 cut(s) 363, 527, 560, 995, 1064, 1100, 1189, 1205, 1229
MlyI GAGTC 1 cut(s) 956
MmeI TCCRAC 3 cut(s) 141, 688, 1019
Mph1103I ATGCAT 1 cut(s) 709
MroNI GCCGGC 1 cut(s) 374
MseI TTAA 1 cut(s) 309
MslI CAYNNNNRTG 2 cut(s) 444, 722
MspA1I CMGCKG 3 cut(s) 82, 431, 982
MspI CCGG 9 cut(s) 76, 100, 315, 330, 345, 375, 714, 776, 860
MspR9I CCNGG 4 cut(s) 316, 330, 776, 851
MvaI CCWGG 1 cut(s) 851
MvnI CGCG 4 cut(s) 42, 246, 770, 982
MwoI GCNNNNNNNGC 4 cut(s) 79, 88, 225, 985
NaeI GCCGGC 1 cut(s) 376
NciI CCSGG 3 cut(s) 316, 330, 776
NdeI CATATG 1 cut(s) 417
NdeII GATC 3 cut(s) 14, 616, 898
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 3 cut(s) 740, 928, 1213
NmuCI GTSAC 2 cut(s) 189, 893
NsiI ATGCAT 1 cut(s) 709
NspV TTCGAA 2 cut(s) 684, 1227
PcsI WCGNNNNNNNCGW 1 cut(s) 64
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 1 cut(s) 1265
PflMI CCANNNNNTGG 1 cut(s) 833
PfoI TCCNGGA 1 cut(s) 849
PkrI GCNGC 4 cut(s) 81, 818, 978, 981
Ple19I CGATCG 1 cut(s) 901
PleI GAGTC 1 cut(s) 955
PpsI GAGTC 1 cut(s) 955
PshAI GACNNNNGTC 3 cut(s) 66, 90, 114
Psp124BI GAGCTC 1 cut(s) 1110
Psp6I CCWGG 1 cut(s) 849
PspGI CCWGG 1 cut(s) 849
PspOMI GGGCCC 1 cut(s) 532
PspPI GGNCC 6 cut(s) 319, 532, 533, 818, 847, 853
PsuI RGATCY 1 cut(s) 14
PvuI CGATCG 1 cut(s) 901
PvuII CAGCTG 1 cut(s) 431
RsaI GTAC 1 cut(s) 566
RsaNI GTAC 1 cut(s) 565
RseI CAYNNNNRTG 2 cut(s) 444, 722
SacI GAGCTC 1 cut(s) 1110
SacII CCGCGG 1 cut(s) 983
SaqAI TTAA 1 cut(s) 309
SatI GCNGC 4 cut(s) 80, 817, 977, 980
Sau3AI GATC 3 cut(s) 14, 616, 898
Sau96I GGNCC 6 cut(s) 319, 532, 533, 818, 847, 853
SchI GAGTC 1 cut(s) 956
ScrFI CCNGG 4 cut(s) 316, 330, 776, 851
SduI GDGCHC 5 cut(s) 359, 415, 536, 1074, 1110
SfaNI GCATC 5 cut(s) 64, 112, 130, 496, 1230
SfcI CTRYAG 2 cut(s) 889, 1286
Sfr303I CCGCGG 1 cut(s) 983
SfuI TTCGAA 2 cut(s) 684, 1227
SgrBI CCGCGG 1 cut(s) 983
SinI GGWCC 3 cut(s) 319, 847, 853
SmiMI CAYNNNNRTG 2 cut(s) 444, 722
SpeI ACTAGT 1 cut(s) 793
Sse9I AATT 9 cut(s) 363, 527, 560, 995, 1064, 1100, 1189, 1205, 1229
SsiI CCGC 9 cut(s) 40, 82, 127, 219, 244, 378, 816, 980, 982
SspI AATATT 1 cut(s) 680
SspMI CTAG 3 cut(s) 26, 371, 794
SstI GAGCTC 1 cut(s) 1110
StyD4I CCNGG 4 cut(s) 314, 328, 774, 849
TaaI ACNGT 1 cut(s) 1287
TaiI ACGT 1 cut(s) 768
TaqI TCGA 6 cut(s) 19, 45, 146, 287, 684, 1227
TasI AATT 9 cut(s) 363, 527, 560, 995, 1064, 1100, 1189, 1205, 1229
TauI GCSGC 2 cut(s) 819, 982
TfiI GAWTC 1 cut(s) 1265
Tru1I TTAA 1 cut(s) 309
Tru9I TTAA 1 cut(s) 309
TseFI GTSAC 2 cut(s) 189, 893
TseI GCWGC 2 cut(s) 79, 976
Tsp45I GTSAC 2 cut(s) 189, 893
TspDTI ATGAA 5 cut(s) 753, 1008, 1101, 1198, 1223
TspGWI ACGGA 1 cut(s) 973
Van91I CCANNNNNTGG 1 cut(s) 833
VpaK11BI GGWCC 3 cut(s) 319, 847, 853
XapI RAATTY 2 cut(s) 363, 1229
XspI CTAG 3 cut(s) 26, 371, 794
ZraI GACGTC 1 cut(s) 766
Zsp2I ATGCAT 1 cut(s) 709
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.