RLG00000016216

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000213
Physical Location & Seq
Forward (+)
4794543 .. 4796667
2125 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016216

Sequence Viewer

Length: 1506 bp
ATGTCTTTGTCCTCCAAAAAACCGCTTGACCGAACCACCAGCGACGGCGAAGAGGAGAGGCAGCAACACCCGCTCCGGCAGTGCCGTGAACGTCGGCATAAGGCTCATAAGCATACGCGTGATGGGAAGAAGAAGAAGAAGAAGACCAAGGAGACAACGAAGCCCAAGTTGAAGTTGGAGTTGGAGTTGGAGGAGGCTAACAAGTCGCTCTACATGTGTGTTCTAGAGCACAGGAGAGACTGGGTGGCTTATGTTGTCCGCACCATCAGACTGTCGGATTTGTTATCATCTTCGGCGGCGGTGGGGGACGATCCATTGCCATTACGGCAAGTGGCTTATGAGGCCGGTTCGCATCTTCCCGGATCTGTGGGTTGCGGTGTTTGGGGATCCCAAATTTTTTTCACCGGCGGCGTGACACCCAGCTCCCCTCACGGCTGCAGGGAAATAGGTCCCGACTCAGTTTGTCATACAAATGTTTATGCCTTTGAAACACGCACAAATGAGATCAGAAAGCTTGATGCCAACTTACAAGGAGGGAAACTTTACCCTCTGATGGTGGAGCTGGGCGGCAAACTGTACGCTCTTTCCTATAGGCTGGTCGGCCATCCTCCATCGTTTGAGGTATTTGACCCTAACATAGGCAAGTGGGAAGGTTTGCCCCAGCCTCCATTTTTCCAAGTTTCCTCTCCATATTATGCAGATTGCAACTTTTCTTACGCAATCGCCGGCACCAAGATCTTTGCCTCGGATGAAAACTGTCCCGTGTTCTGCTTTGACGTCGCCCACCCAGACAGAGAATGGAGACTGGTCTCTACTATGTGCCGGGGTGGCTCTTTTCCCTTCGATAACAAAGTAGCATTAGTCCTGGACCTGCAGGGGGACGATGACAAGAAAATAATGTTTGCCTACAGTCATGAGCCTTGGCGTCTATGGGTATATCTTATGTCATTGTATGAAAACCAAGAAACTATCACAAAAATCGGTGATCTGAGGATGCCAGTCTTGCCTGATGAATTCGGTTTGCCACAACGCTGTGAATTTTTGCACATAGGAGGCCAGAAAGCCTGCCTTGTTATCACCGAAATCGGCTTCCGTGATGAAGACGAGCCTGTTTATGAGCTCGGTACTCATAAGAGACACGGTGCAGTCATACCATTTCAATTCGAAGTTGATATCACCAAGGTGGACAAGGACAAGAAAAATTGTTTAACACTCCAATTTATGCCTCTTCGCAGCTTCGAATACCATACCAACCCATCCACTCTACCTGAACCTGAAACGTGGATTGTTGGTCGTATTGATATTCCTGATCAACTGACTGGAGTAGACTGGCTTATAGAAGAGGGACTAGCACAAGCAGTCAACAGTGGGGTGCCTAGGTTTCCTGATGCCTTCTGGCCTGCAGCGCAGAGTGACTTGTTACATCATGGGATGTGTATGACACTTGCTATTCTGAGAAGTGTTGCAGGGAAGGTCATTTTTGTTTGGTCTCAAGCTTGCAGGTAA

Protein Analysis

502

Amino Acids

56.76

Weight (kDa)

6.39

Isoelectric Point (pI)

46.91

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 70 - 290 5.3e-11 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 780
Acc36I ACCTGC 2 cut(s) 879, 1491
AccB1I GGYRCC 2 cut(s) 728, 1372
AccBSI CCGCTC 1 cut(s) 73
AccI GTMKAC 1 cut(s) 1326
AccII CGCG 1 cut(s) 118
AciI CCGC 8 cut(s) 23, 71, 259, 296, 299, 375, 408, 567
AclWI GGATC 4 cut(s) 305, 370, 381, 394
AcoI YGGCCR 1 cut(s) 601
AcsI RAATTY 3 cut(s) 393, 1013, 1037
AcyI GRCGYC 2 cut(s) 777, 925
AfaI GTAC 2 cut(s) 578, 1126
AfiI CCNNNNNNNGG 3 cut(s) 553, 638, 877
AflIII ACRYGT 2 cut(s) 116, 213
AgsI TTSAA 3 cut(s) 172, 488, 1160
AjnI CCWGG 1 cut(s) 864
AjuI GAANNNNNNNTTGG 2 cut(s) 164, 196
AleI CACNNNNGTG 1 cut(s) 1181
AluBI AGCT 6 cut(s) 423, 514, 562, 1120, 1236, 1496
AluI AGCT 6 cut(s) 423, 514, 562, 1120, 1236, 1496
Alw21I GWGCWC 2 cut(s) 231, 1122
Alw26I GTCTC 6 cut(s) 146, 231, 796, 814, 1129, 1494
AlwI GGATC 4 cut(s) 305, 370, 381, 394
AoxI GGCC 4 cut(s) 342, 601, 1054, 1397
ApeKI GCWGC 4 cut(s) 61, 435, 1233, 1403
ApoI RAATTY 3 cut(s) 393, 1013, 1037
AspA2I CCTAGG 1 cut(s) 1376
AspLEI GCGC 1 cut(s) 1408
AspS9I GGNCC 2 cut(s) 449, 868
AsuC2I CCSGG 2 cut(s) 360, 824
AsuHPI GGTGA 4 cut(s) 394, 995, 1069, 1168
AsuII TTCGAA 2 cut(s) 1164, 1239
AvaII GGWCC 2 cut(s) 449, 868
AvrII CCTAGG 1 cut(s) 1376
BamHI GGATCC 1 cut(s) 386
BanI GGYRCC 2 cut(s) 728, 1372
BanII GRGCYC 1 cut(s) 1122
BbsI GAAGAC 2 cut(s) 149, 1107
Bbv12I GWGCWC 2 cut(s) 231, 1122
BbvI GCAGC 4 cut(s) 73, 422, 1245, 1415
BccI CCATC 6 cut(s) 116, 272, 547, 612, 619, 1264
BceAI ACGGC 4 cut(s) 61, 69, 341, 448
BciT130I CCWGG 1 cut(s) 866
BclI TGATCA 1 cut(s) 1309
BcnI CCSGG 2 cut(s) 360, 824
BcoDI GTCTC 6 cut(s) 146, 231, 796, 814, 1129, 1494
BfaI CTAG 3 cut(s) 224, 1349, 1377
BfmI CTRYAG 5 cut(s) 436, 589, 872, 907, 1401
BfuAI ACCTGC 2 cut(s) 879, 1491
BglI GCCNNNNNGGC 2 cut(s) 325, 828
BglII AGATCT 1 cut(s) 735
BisI GCNGC 7 cut(s) 62, 297, 409, 436, 568, 1234, 1404
BlnI CCTAGG 1 cut(s) 1376
BlsI GCNGC 7 cut(s) 63, 298, 410, 437, 569, 1235, 1405
Bme1390I CCNGG 3 cut(s) 360, 824, 866
Bme18I GGWCC 2 cut(s) 449, 868
BmgT120I GGNCC 2 cut(s) 449, 868
BmiI GGNNCC 4 cut(s) 388, 451, 730, 1374
BmrFI CCNGG 3 cut(s) 360, 824, 866
BmrI ACTGGG 1 cut(s) 250
BmsI GCATC 4 cut(s) 361, 508, 984, 1378
BmuI ACTGGG 1 cut(s) 250
BpiI GAAGAC 2 cut(s) 149, 1107
BpmI CTGGAG 1 cut(s) 1341
Bpu14I TTCGAA 2 cut(s) 1164, 1239
BpuEI CTTGAG 1 cut(s) 1476
BpuMI CCSGG 2 cut(s) 360, 824
BsaHI GRCGYC 2 cut(s) 777, 925
BsaI GGTCTC 2 cut(s) 814, 1494
BsaJI CCNNGG 6 cut(s) 147, 744, 823, 920, 1179, 1376
BsaXI ACNNNNNCTCC 4 cut(s) 57, 87, 170, 200
Bsc4I CCNNNNNNNGG 3 cut(s) 553, 638, 877
Bse118I RCCGGY 3 cut(s) 344, 404, 725
Bse1I ACTGG 5 cut(s) 245, 810, 998, 1324, 1334
Bse3DI GCAATG 1 cut(s) 314
BseBI CCWGG 1 cut(s) 866
BseDI CCNNGG 6 cut(s) 147, 744, 823, 920, 1179, 1376
BseGI GGATG 5 cut(s) 604, 754, 999, 1256, 1437
BseLI CCNNNNNNNGG 3 cut(s) 553, 638, 877
BseMI GCAATG 1 cut(s) 314
BseMII CTCAG 3 cut(s) 471, 980, 1445
BseNI ACTGG 5 cut(s) 245, 810, 998, 1324, 1334
BseRI GAGGAG 2 cut(s) 68, 206
BseXI GCAGC 4 cut(s) 73, 422, 1245, 1415
BseYI CCCAGC 3 cut(s) 419, 562, 660
BsgI GTGCAG 1 cut(s) 1164
Bsh1236I CGCG 1 cut(s) 118
BshFI GGCC 4 cut(s) 344, 603, 1056, 1399
BshNI GGYRCC 2 cut(s) 728, 1372
BsiHKAI GWGCWC 2 cut(s) 231, 1122
BsiSI CCGG 6 cut(s) 76, 345, 360, 405, 726, 823
BslFI GGGAC 5 cut(s) 320, 435, 744, 893, 1359
BslI CCNNNNNNNGG 3 cut(s) 553, 638, 877
BsmAI GTCTC 6 cut(s) 146, 231, 796, 814, 1129, 1494
BsmFI GGGAC 5 cut(s) 320, 435, 744, 893, 1359
BsnI GGCC 4 cut(s) 344, 603, 1056, 1399
Bso31I GGTCTC 2 cut(s) 814, 1494
Bsp119I TTCGAA 2 cut(s) 1164, 1239
Bsp1286I GDGCHC 2 cut(s) 231, 1122
Bsp143I GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
BspACI CCGC 8 cut(s) 23, 71, 259, 296, 299, 375, 408, 567
BspANI GGCC 4 cut(s) 344, 603, 1056, 1399
BspCNI CTCAG 3 cut(s) 470, 981, 1446
BspFNI CGCG 1 cut(s) 118
BspHI TCATGA 1 cut(s) 913
BspLI GGNNCC 4 cut(s) 388, 451, 730, 1374
BspMAI CTGCAG 3 cut(s) 440, 876, 1405
BspMI ACCTGC 2 cut(s) 879, 1491
BspPI GGATC 4 cut(s) 305, 370, 381, 394
BspT104I TTCGAA 2 cut(s) 1164, 1239
BspT107I GGYRCC 2 cut(s) 728, 1372
BspTNI GGTCTC 2 cut(s) 814, 1494
BsrBI CCGCTC 1 cut(s) 73
BsrDI GCAATG 1 cut(s) 314
BsrFI RCCGGY 3 cut(s) 344, 404, 725
BsrI ACTGG 5 cut(s) 245, 810, 998, 1324, 1334
BssAI RCCGGY 3 cut(s) 344, 404, 725
BssECI CCNNGG 6 cut(s) 147, 744, 823, 920, 1179, 1376
BssMI GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
BssNI GRCGYC 2 cut(s) 777, 925
BssT1I CCWWGG 4 cut(s) 147, 920, 1179, 1376
Bst2UI CCWGG 1 cut(s) 866
Bst4CI ACNGT 6 cut(s) 273, 576, 758, 911, 1142, 1367
Bst6I CTCTTC 3 cut(s) 45, 1233, 1335
BstACI GRCGYC 2 cut(s) 777, 925
BstBI TTCGAA 2 cut(s) 1164, 1239
BstC8I GCNNGC 4 cut(s) 727, 1066, 1401, 1498
BstDEI CTNAG 3 cut(s) 457, 989, 1454
BstENI CCTNNNNNAGG 1 cut(s) 636
BstF5I GGATG 5 cut(s) 604, 754, 999, 1256, 1437
BstFNI CGCG 1 cut(s) 118
BstHHI GCGC 1 cut(s) 1408
BstKTI GATC 7 cut(s) 313, 365, 389, 507, 738, 988, 1312
BstMAI GTCTC 6 cut(s) 146, 231, 796, 814, 1129, 1494
BstMBI GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
BstMWI GCNNNNNNNGC 6 cut(s) 70, 325, 341, 828, 1003, 1405
BstNI CCWGG 1 cut(s) 866
BstNSI RCATGY 1 cut(s) 217
BstSCI CCNGG 3 cut(s) 358, 822, 864
BstSFI CTRYAG 5 cut(s) 436, 589, 872, 907, 1401
BstUI CGCG 1 cut(s) 118
BstV1I GCAGC 4 cut(s) 73, 422, 1245, 1415
BstV2I GAAGAC 2 cut(s) 149, 1107
BstX2I RGATCY 3 cut(s) 362, 386, 735
BstYI RGATCY 3 cut(s) 362, 386, 735
BsuRI GGCC 4 cut(s) 344, 603, 1056, 1399
BtsCI GGATG 5 cut(s) 604, 754, 999, 1256, 1437
BtsI GCAGTG 1 cut(s) 86
BtsIMutI CAGTG 2 cut(s) 86, 1372
BveI ACCTGC 2 cut(s) 879, 1491
Cac8I GCNNGC 4 cut(s) 727, 1066, 1401, 1498
CciI TCATGA 1 cut(s) 913
CfoI GCGC 1 cut(s) 1408
Cfr10I RCCGGY 3 cut(s) 344, 404, 725
Cfr13I GGNCC 2 cut(s) 449, 868
CseI GACGC 1 cut(s) 914
Csp6I GTAC 2 cut(s) 577, 1125
CviAII CATG 3 cut(s) 214, 914, 1427
CviQI GTAC 2 cut(s) 577, 1125
DdeI CTNAG 3 cut(s) 457, 989, 1454
DpnI GATC 7 cut(s) 312, 364, 388, 506, 737, 987, 1311
DpnII GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
EaeI YGGCCR 1 cut(s) 601
Eam1104I CTCTTC 3 cut(s) 45, 1233, 1335
EarI CTCTTC 3 cut(s) 45, 1233, 1335
Ecl136II GAGCTC 1 cut(s) 1120
Eco130I CCWWGG 4 cut(s) 147, 920, 1179, 1376
Eco24I GRGCYC 1 cut(s) 1122
Eco31I GGTCTC 2 cut(s) 814, 1494
Eco32I GATATC 1 cut(s) 1174
Eco47I GGWCC 2 cut(s) 449, 868
Eco53kI GAGCTC 1 cut(s) 1120
EcoICRI GAGCTC 1 cut(s) 1120
EcoNI CCTNNNNNAGG 1 cut(s) 636
EcoO109I RGGNCCY 1 cut(s) 449
EcoRI GAATTC 1 cut(s) 1013
EcoRII CCWGG 1 cut(s) 864
EcoRV GATATC 1 cut(s) 1174
EcoT14I CCWWGG 4 cut(s) 147, 920, 1179, 1376
EcoT38I GRGCYC 1 cut(s) 1122
ErhI CCWWGG 4 cut(s) 147, 920, 1179, 1376
FaeI CATG 3 cut(s) 217, 917, 1430
FalI AAGNNNNNCTT 2 cut(s) 1053, 1085
FaqI GGGAC 5 cut(s) 320, 435, 744, 893, 1359
FatI CATG 3 cut(s) 213, 913, 1426
FauI CCCGC 1 cut(s) 78
FbaI TGATCA 1 cut(s) 1309
FblI GTMKAC 1 cut(s) 1326
Fnu4HI GCNGC 7 cut(s) 62, 297, 409, 436, 568, 1234, 1404
FokI GGATG 5 cut(s) 591, 761, 1006, 1243, 1444
FriOI GRGCYC 1 cut(s) 1122
Fsp4HI GCNGC 7 cut(s) 62, 297, 409, 436, 568, 1234, 1404
FspBI CTAG 3 cut(s) 224, 1349, 1377
GlaI GCGC 1 cut(s) 1407
GluI GCNGC 7 cut(s) 62, 297, 409, 436, 568, 1234, 1404
GsaI CCCAGC 3 cut(s) 423, 566, 664
GsuI CTGGAG 1 cut(s) 1341
HaeIII GGCC 4 cut(s) 344, 603, 1056, 1399
HapII CCGG 6 cut(s) 76, 345, 360, 405, 726, 823
HgaI GACGC 1 cut(s) 914
HhaI GCGC 1 cut(s) 1408
Hin1I GRCGYC 2 cut(s) 777, 925
Hin1II CATG 3 cut(s) 217, 917, 1430
Hin6I GCGC 1 cut(s) 1406
HinP1I GCGC 1 cut(s) 1406
HincII GTYRAC 1 cut(s) 1363
HindII GTYRAC 1 cut(s) 1363
HindIII AAGCTT 2 cut(s) 512, 1494
HinfI GANTC 1 cut(s) 455
HpaII CCGG 6 cut(s) 76, 345, 360, 405, 726, 823
HphI GGTGA 4 cut(s) 394, 995, 1069, 1168
Hpy166II GTNNAC 4 cut(s) 89, 1186, 1327, 1363
Hpy188I TCNGA 7 cut(s) 269, 277, 509, 552, 748, 990, 1455
Hpy188III TCNNGA 5 cut(s) 224, 452, 914, 1307, 1385
Hpy8I GTNNAC 4 cut(s) 89, 1186, 1327, 1363
Hpy99I CGWCG 3 cut(s) 47, 96, 782
HpyAV CCTTC 4 cut(s) 644, 850, 1402, 1465
HpyCH4III ACNGT 6 cut(s) 273, 576, 758, 911, 1142, 1367
HpyCH4IV ACGT 3 cut(s) 91, 777, 1280
HpyCH4V TGCA 9 cut(s) 438, 698, 705, 874, 1045, 1145, 1403, 1466, 1500
HpyF10VI GCNNNNNNNGC 6 cut(s) 70, 325, 341, 828, 1003, 1405
HpyF3I CTNAG 3 cut(s) 457, 989, 1454
HpySE526I ACGT 3 cut(s) 91, 777, 1280
Hsp92I GRCGYC 2 cut(s) 777, 925
Hsp92II CATG 3 cut(s) 217, 917, 1430
HspAI GCGC 1 cut(s) 1406
KroI GCCGGC 1 cut(s) 725
KroNI GCCGGC 1 cut(s) 727
Ksp22I TGATCA 1 cut(s) 1309
Kzo9I GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
LmnI GCTCC 3 cut(s) 78, 428, 559
Lsp1109I GCAGC 4 cut(s) 73, 422, 1245, 1415
LweI GCATC 4 cut(s) 361, 508, 984, 1378
MaeI CTAG 3 cut(s) 224, 1349, 1377
MaeII ACGT 3 cut(s) 91, 777, 1280
MaeIII GTNAC 3 cut(s) 412, 1412, 1419
MalI GATC 7 cut(s) 312, 364, 388, 506, 737, 987, 1311
MbiI CCGCTC 1 cut(s) 73
MboI GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
MflI RGATCY 3 cut(s) 362, 386, 735
MhlI GDGCHC 2 cut(s) 231, 1122
MluCI AATT 6 cut(s) 393, 1013, 1037, 1160, 1201, 1217
MluI ACGCGT 1 cut(s) 116
MlyI GAGTC 1 cut(s) 449
MmeI TCCRAC 4 cut(s) 156, 162, 168, 255
MroNI GCCGGC 1 cut(s) 725
MseI TTAA 1 cut(s) 1208
MslI CAYNNNNRTG 3 cut(s) 117, 471, 1181
MspI CCGG 6 cut(s) 76, 345, 360, 405, 726, 823
MspR9I CCNGG 3 cut(s) 360, 824, 866
MvaI CCWGG 1 cut(s) 866
MvnI CGCG 1 cut(s) 118
MwoI GCNNNNNNNGC 6 cut(s) 70, 325, 341, 828, 1003, 1405
NaeI GCCGGC 1 cut(s) 727
NciI CCSGG 2 cut(s) 360, 824
NdeII GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
NgoMIV GCCGGC 1 cut(s) 725
NlaIII CATG 3 cut(s) 217, 917, 1430
NlaIV GGNNCC 4 cut(s) 388, 451, 730, 1374
NmuCI GTSAC 2 cut(s) 412, 1412
NspI RCATGY 1 cut(s) 217
NspV TTCGAA 2 cut(s) 1164, 1239
OliI CACNNNNGTG 1 cut(s) 1181
PagI TCATGA 1 cut(s) 913
PciI ACATGT 1 cut(s) 213
PdiI GCCGGC 1 cut(s) 727
PfoI TCCNGGA 2 cut(s) 358, 864
PkrI GCNGC 7 cut(s) 63, 298, 410, 437, 569, 1235, 1405
PleI GAGTC 1 cut(s) 449
PpsI GAGTC 1 cut(s) 449
PpuMI RGGWCCY 1 cut(s) 449
PscI ACATGT 1 cut(s) 213
Psp124BI GAGCTC 1 cut(s) 1122
Psp5II RGGWCCY 1 cut(s) 449
Psp6I CCWGG 1 cut(s) 864
PspFI CCCAGC 3 cut(s) 419, 562, 660
PspGI CCWGG 1 cut(s) 864
PspN4I GGNNCC 4 cut(s) 388, 451, 730, 1374
PspPI GGNCC 2 cut(s) 449, 868
PspPPI RGGWCCY 1 cut(s) 449
PstI CTGCAG 3 cut(s) 440, 876, 1405
PsuI RGATCY 3 cut(s) 362, 386, 735
RsaI GTAC 2 cut(s) 578, 1126
RsaNI GTAC 2 cut(s) 577, 1125
RseI CAYNNNNRTG 3 cut(s) 117, 471, 1181
SacI GAGCTC 1 cut(s) 1122
SaqAI TTAA 1 cut(s) 1208
SatI GCNGC 7 cut(s) 62, 297, 409, 436, 568, 1234, 1404
Sau3AI GATC 7 cut(s) 310, 362, 386, 504, 735, 985, 1309
Sau96I GGNCC 2 cut(s) 449, 868
SbfI CCTGCAGG 1 cut(s) 876
SchI GAGTC 1 cut(s) 449
ScrFI CCNGG 3 cut(s) 360, 824, 866
SdaI CCTGCAGG 1 cut(s) 876
SduI GDGCHC 2 cut(s) 231, 1122
SfaNI GCATC 4 cut(s) 361, 508, 984, 1378
SfcI CTRYAG 5 cut(s) 436, 589, 872, 907, 1401
SfuI TTCGAA 2 cut(s) 1164, 1239
SgrAI CRCCGGYG 1 cut(s) 404
SinI GGWCC 2 cut(s) 449, 868
SmiMI CAYNNNNRTG 3 cut(s) 117, 471, 1181
SmlI CTYRAG 1 cut(s) 1491
SmoI CTYRAG 1 cut(s) 1491
Sse8387I CCTGCAGG 1 cut(s) 876
Sse9I AATT 6 cut(s) 393, 1013, 1037, 1160, 1201, 1217
SsiI CCGC 8 cut(s) 23, 71, 259, 296, 299, 375, 408, 567
SspMI CTAG 3 cut(s) 224, 1349, 1377
SstI GAGCTC 1 cut(s) 1122
StyD4I CCNGG 3 cut(s) 358, 822, 864
StyI CCWWGG 4 cut(s) 147, 920, 1179, 1376
TaaI ACNGT 6 cut(s) 273, 576, 758, 911, 1142, 1367
TaiI ACGT 3 cut(s) 94, 780, 1283
TaqI TCGA 3 cut(s) 843, 1164, 1239
TaqII GACCGA 1 cut(s) 45
TasI AATT 6 cut(s) 393, 1013, 1037, 1160, 1201, 1217
TauI GCSGC 3 cut(s) 299, 411, 570
Tru1I TTAA 1 cut(s) 1208
Tru9I TTAA 1 cut(s) 1208
TscAI CASTG 2 cut(s) 86, 1372
TseFI GTSAC 2 cut(s) 412, 1412
TseI GCWGC 4 cut(s) 61, 435, 1233, 1403
Tsp45I GTSAC 2 cut(s) 412, 1412
TspDTI ATGAA 4 cut(s) 765, 969, 1026, 1113
TspGWI ACGGA 1 cut(s) 1082
TspRI CASTG 2 cut(s) 86, 1372
VpaK11BI GGWCC 2 cut(s) 449, 868
XagI CCTNNNNNAGG 1 cut(s) 636
XapI RAATTY 3 cut(s) 393, 1013, 1037
XbaI TCTAGA 1 cut(s) 223
XceI RCATGY 1 cut(s) 217
XcmI CCANNNNNNNNNTGG 2 cut(s) 172, 795
XmaJI CCTAGG 1 cut(s) 1376
XmiI GTMKAC 1 cut(s) 1326
XspI CTAG 3 cut(s) 224, 1349, 1377
ZraI GACGTC 1 cut(s) 778
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.