Prupe.7G110000_v2.0.a1

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp07
OG0000213
Physical Location & Seq
Forward (+)
13778401 .. 13780562
2162 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.7G110000.1

Sequence Viewer

Length: 1188 bp
ATGTACCTACGAGTCCAAAACCGGTCATGCTCATTACGATATCCGGACCATCAGATTGAGCGATTTATTATCCACATTCAAATCCAAATCCAAAATAGAGTTGCTGCGAAAATTGGCTACTGTGGAGGGCAAGGATGTTCCCTACTTGATGGGTTGCGGTTTTTTGGGCTCCCAAATTCTTCTTGCGGGGGCCTAGAACCGCGGGACCCGAAACAGAAGACGGGGTTTCGATACGGACCATATGGGAGCAAACAAATTTATCTGTTTGAGACAGATGATGATGGGAAAAGAAAGGAGAAAGAAGTCTACAATCACGGTCACAGTCACACTACTAGTGATGAAGGAGAATTTGGGGGGATCATCAAGGGGGACTGCTGCTATGGTGAACTTCATCAAGGGAAACCTGAACCATTGGTGGTTGAGGTTAGTGGGAAGCTCTATGTTCTCTCTGGTGGTCCGCGATGTTTCTCTAAAAGTCCTGTTTTTGAGGAGTTCAACTCGGGGACTTGGACCACTCTGCCAGACCCTCCATATATACGACCTTGTCCTCGTGCATTTCGTTACTTCTCTTATGCGATTGTGGGCACCAAGATCATGGTCTCCACACCAATAACTCCAGCTTTTTGCTTCTACGTCGCCGCCCCAAATCCCCGCCAATGGTGGGTGTGCTCTGCTGAGCCTTTTCCCTTCATAGGCCTTGCTTTAGTGGTGGACTTGGAGGAGGAAGGTAGTGACCTTAAATGTAATAAGATAATGTTTGGCTATGAACGCATACCTGGATATGGACATGGTTATGATGTAGTAGCCTACGCCATGTTCCACGATGATGAAAATGGCTATTGTTATTATCATCGCATCCAACCTCTACATCTGCTGACAGAGTTCCATGCATTACTTGGTAGATCACATGACACGTTTAGGTTTGTCCATCTAGGAGGTCGAAAAGTCTGCTTTGTTATTGCCAGTTTCATCCCAGGCTTGGAAGCTGATGATGATCATCCTATTCCTACGACGGAGAAGATGAATCTCGTTGTCGTGACATTCGAATTTTCCATTTCCGAGAATAATGATGGTTCAACAAGATCCTTCTCAACCAAAACCTTGGGTTCTTGCGTCTTTCCTTTCGATTGGGCTTCAGAATCTGGTCGCACCTTCGATGGCAAACTGCTTGGTTGCTTTGTGCGCTAA

Protein Analysis

396

Amino Acids

44.52

Weight (kDa)

6.27

Isoelectric Point (pI)

33.17

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 584
AccI GTMKAC 1 cut(s) 306
AccII CGCG 2 cut(s) 202, 460
AccIII TCCGGA 1 cut(s) 43
AciI CCGC 7 cut(s) 157, 186, 200, 202, 458, 639, 652
AclWI GGATC 2 cut(s) 365, 1077
AcsI RAATTY 4 cut(s) 175, 255, 347, 1046
AcuI CTGAAG 1 cut(s) 1119
AfaI GTAC 1 cut(s) 5
AfiI CCNNNNNNNGG 5 cut(s) 657, 661, 692, 782, 979
AflIII ACRYGT 1 cut(s) 912
AgeI ACCGGT 1 cut(s) 21
AgsI TTSAA 3 cut(s) 80, 496, 1077
AhlI ACTAGT 1 cut(s) 332
AjnI CCWGG 2 cut(s) 775, 973
AjuI GAANNNNNNNTTGG 2 cut(s) 333, 365
AluBI AGCT 3 cut(s) 436, 620, 986
AluI AGCT 3 cut(s) 436, 620, 986
Alw21I GWGCWC 1 cut(s) 671
Alw26I GTCTC 2 cut(s) 263, 604
AlwI GGATC 2 cut(s) 365, 1077
AlwNI CAGNNNCTG 1 cut(s) 1142
Ama87I CYCGRG 1 cut(s) 499
Aor13HI TCCGGA 1 cut(s) 43
AoxI GGCC 2 cut(s) 190, 694
ApeKI GCWGC 2 cut(s) 104, 375
ApoI RAATTY 4 cut(s) 175, 255, 347, 1046
AsiGI ACCGGT 1 cut(s) 21
AspLEI GCGC 1 cut(s) 1185
AspS9I GGNCC 6 cut(s) 46, 190, 205, 236, 455, 510
AsuHPI GGTGA 1 cut(s) 395
AsuII TTCGAA 1 cut(s) 1044
AvaI CYCGRG 1 cut(s) 499
AvaII GGWCC 5 cut(s) 46, 205, 236, 455, 510
BaeGI GKGCMC 1 cut(s) 587
BanI GGYRCC 1 cut(s) 584
BanII GRGCYC 1 cut(s) 171
BauI CACGAG 1 cut(s) 549
BbsI GAAGAC 1 cut(s) 224
Bbv12I GWGCWC 1 cut(s) 671
BbvI GCAGC 2 cut(s) 91, 362
BccI CCATC 6 cut(s) 57, 143, 275, 936, 1064, 1151
BcgI CGANNNNNNTGC 2 cut(s) 930, 964
BciT130I CCWGG 2 cut(s) 777, 975
BclI TGATCA 1 cut(s) 994
BcoDI GTCTC 2 cut(s) 263, 604
BcuI ACTAGT 1 cut(s) 332
BfaI CTAG 3 cut(s) 194, 333, 932
BisI GCNGC 3 cut(s) 105, 376, 639
BlpI GCTNAGC 1 cut(s) 675
BlsI GCNGC 3 cut(s) 106, 377, 640
Bme1390I CCNGG 2 cut(s) 777, 975
Bme18I GGWCC 5 cut(s) 46, 205, 236, 455, 510
BmeT110I CYCGRG 1 cut(s) 499
BmgT120I GGNCC 6 cut(s) 46, 190, 205, 236, 455, 510
BmiI GGNNCC 5 cut(s) 170, 191, 206, 207, 586
BmrFI CCNGG 2 cut(s) 777, 975
BmsI GCATC 1 cut(s) 864
BpiI GAAGAC 1 cut(s) 224
BplI GAGNNNNNCTC 2 cut(s) 482, 514
BpmI CTGGAG 1 cut(s) 600
Bpu1102I GCTNAGC 1 cut(s) 675
Bpu14I TTCGAA 1 cut(s) 1044
BsaBI GATNNNNATC 2 cut(s) 993, 996
BsaI GGTCTC 1 cut(s) 604
BsaJI CCNNGG 3 cut(s) 200, 973, 1101
BsaWI WCCGGW 2 cut(s) 21, 43
Bsc4I CCNNNNNNNGG 5 cut(s) 657, 661, 692, 782, 979
Bse118I RCCGGY 1 cut(s) 21
Bse1I ACTGG 1 cut(s) 963
Bse8I GATNNNNATC 2 cut(s) 993, 996
BseAI TCCGGA 1 cut(s) 43
BseBI CCWGG 2 cut(s) 777, 975
BseDI CCNNGG 3 cut(s) 200, 973, 1101
BseGI GGATG 4 cut(s) 140, 855, 969, 997
BseJI GATNNNNATC 2 cut(s) 993, 996
BseLI CCNNNNNNNGG 5 cut(s) 657, 661, 692, 782, 979
BseMII CTCAG 1 cut(s) 666
BseNI ACTGG 1 cut(s) 963
BseRI GAGGAG 2 cut(s) 503, 734
BseSI GKGCMC 1 cut(s) 587
BseXI GCAGC 2 cut(s) 91, 362
Bsh1236I CGCG 2 cut(s) 202, 460
BshFI GGCC 2 cut(s) 192, 696
BshNI GGYRCC 1 cut(s) 584
BshTI ACCGGT 1 cut(s) 21
BsiHKAI GWGCWC 1 cut(s) 671
BsiHKCI CYCGRG 1 cut(s) 499
BsiSI CCGG 2 cut(s) 22, 44
BslFI GGGAC 3 cut(s) 218, 383, 517
BslI CCNNNNNNNGG 5 cut(s) 657, 661, 692, 782, 979
BsmAI GTCTC 2 cut(s) 263, 604
BsmFI GGGAC 3 cut(s) 218, 383, 517
BsnI GGCC 2 cut(s) 192, 696
Bso31I GGTCTC 1 cut(s) 604
BsoBI CYCGRG 1 cut(s) 499
Bsp119I TTCGAA 1 cut(s) 1044
Bsp1286I GDGCHC 3 cut(s) 171, 587, 671
Bsp13I TCCGGA 1 cut(s) 43
Bsp143I GATC 5 cut(s) 357, 591, 902, 994, 1082
Bsp1720I GCTNAGC 1 cut(s) 675
BspACI CCGC 7 cut(s) 157, 186, 200, 202, 458, 639, 652
BspANI GGCC 2 cut(s) 192, 696
BspCNI CTCAG 1 cut(s) 667
BspEI TCCGGA 1 cut(s) 43
BspFNI CGCG 2 cut(s) 202, 460
BspLI GGNNCC 5 cut(s) 170, 191, 206, 207, 586
BspPI GGATC 2 cut(s) 365, 1077
BspT104I TTCGAA 1 cut(s) 1044
BspT107I GGYRCC 1 cut(s) 584
BspTNI GGTCTC 1 cut(s) 604
BsrFI RCCGGY 1 cut(s) 21
BsrI ACTGG 1 cut(s) 963
BssAI RCCGGY 1 cut(s) 21
BssECI CCNNGG 3 cut(s) 200, 973, 1101
BssMI GATC 5 cut(s) 357, 591, 902, 994, 1082
BssSI CACGAG 1 cut(s) 549
BssT1I CCWWGG 1 cut(s) 1101
Bst2BI CACGAG 1 cut(s) 549
Bst2UI CCWGG 2 cut(s) 777, 975
Bst4CI ACNGT 3 cut(s) 122, 317, 323
BstBI TTCGAA 1 cut(s) 1044
BstDEI CTNAG 1 cut(s) 675
BstDSI CCRYGG 1 cut(s) 200
BstF5I GGATG 4 cut(s) 140, 855, 969, 997
BstFNI CGCG 2 cut(s) 202, 460
BstHHI GCGC 1 cut(s) 1185
BstKTI GATC 5 cut(s) 360, 594, 905, 997, 1085
BstMAI GTCTC 2 cut(s) 263, 604
BstMBI GATC 5 cut(s) 357, 591, 902, 994, 1082
BstMWI GCNNNNNNNGC 2 cut(s) 768, 1182
BstNI CCWGG 2 cut(s) 777, 975
BstSCI CCNGG 2 cut(s) 775, 973
BstSLI GKGCMC 1 cut(s) 587
BstUI CGCG 2 cut(s) 202, 460
BstV1I GCAGC 2 cut(s) 91, 362
BstV2I GAAGAC 1 cut(s) 224
BstX2I RGATCY 1 cut(s) 1082
BstXI CCANNNNNNTGG 2 cut(s) 595, 1102
BstYI RGATCY 1 cut(s) 1082
BsuRI GGCC 2 cut(s) 192, 696
BtgI CCRYGG 1 cut(s) 200
BtgZI GCGATG 2 cut(s) 475, 836
BtsCI GGATG 4 cut(s) 140, 855, 969, 997
CaiI CAGNNNCTG 1 cut(s) 1142
CfoI GCGC 1 cut(s) 1185
Cfr10I RCCGGY 1 cut(s) 21
Cfr13I GGNCC 6 cut(s) 46, 190, 205, 236, 455, 510
Cfr42I CCGCGG 1 cut(s) 203
CseI GACGC 1 cut(s) 1102
Csp6I GTAC 1 cut(s) 4
CspAI ACCGGT 1 cut(s) 21
CviAII CATG 6 cut(s) 27, 595, 788, 814, 887, 908
CviQI GTAC 1 cut(s) 4
DdeI CTNAG 1 cut(s) 675
DpnI GATC 5 cut(s) 359, 593, 904, 996, 1084
DpnII GATC 5 cut(s) 357, 591, 902, 994, 1082
Eco130I CCWWGG 1 cut(s) 1101
Eco147I AGGCCT 1 cut(s) 696
Eco24I GRGCYC 1 cut(s) 171
Eco31I GGTCTC 1 cut(s) 604
Eco32I GATATC 1 cut(s) 41
Eco47I GGWCC 5 cut(s) 46, 205, 236, 455, 510
Eco57I CTGAAG 1 cut(s) 1119
Eco88I CYCGRG 1 cut(s) 499
EcoO109I RGGNCCY 2 cut(s) 190, 205
EcoRII CCWGG 2 cut(s) 775, 973
EcoRV GATATC 1 cut(s) 41
EcoT14I CCWWGG 1 cut(s) 1101
EcoT22I ATGCAT 1 cut(s) 892
EcoT38I GRGCYC 1 cut(s) 171
ErhI CCWWGG 1 cut(s) 1101
FaeI CATG 6 cut(s) 30, 598, 791, 817, 890, 911
FaqI GGGAC 3 cut(s) 218, 383, 517
FatI CATG 6 cut(s) 26, 594, 787, 813, 886, 907
FauI CCCGC 3 cut(s) 179, 195, 659
FauNDI CATATG 1 cut(s) 241
FbaI TGATCA 1 cut(s) 994
FblI GTMKAC 1 cut(s) 306
Fnu4HI GCNGC 3 cut(s) 105, 376, 639
FokI GGATG 4 cut(s) 147, 842, 956, 984
FriOI GRGCYC 1 cut(s) 171
Fsp4HI GCNGC 3 cut(s) 105, 376, 639
FspBI CTAG 3 cut(s) 194, 333, 932
GlaI GCGC 1 cut(s) 1184
GluI GCNGC 3 cut(s) 105, 376, 639
GsuI CTGGAG 1 cut(s) 600
HaeIII GGCC 2 cut(s) 192, 696
HapII CCGG 2 cut(s) 22, 44
HgaI GACGC 1 cut(s) 1102
HhaI GCGC 1 cut(s) 1185
Hin1II CATG 6 cut(s) 30, 598, 791, 817, 890, 911
Hin6I GCGC 1 cut(s) 1183
HinP1I GCGC 1 cut(s) 1183
HinfI GANTC 3 cut(s) 12, 1024, 1139
HpaII CCGG 2 cut(s) 22, 44
HphI GGTGA 1 cut(s) 395
Hpy166II GTNNAC 3 cut(s) 307, 386, 712
Hpy188I TCNGA 3 cut(s) 54, 1060, 1138
Hpy188III TCNNGA 2 cut(s) 44, 1036
Hpy8I GTNNAC 3 cut(s) 307, 386, 712
Hpy99I CGWCG 2 cut(s) 638, 1015
HpyAV CCTTC 5 cut(s) 335, 697, 719, 1096, 1162
HpyCH4III ACNGT 3 cut(s) 122, 317, 323
HpyCH4IV ACGT 2 cut(s) 633, 914
HpyCH4V TGCA 2 cut(s) 554, 890
HpyF10VI GCNNNNNNNGC 2 cut(s) 768, 1182
HpyF3I CTNAG 1 cut(s) 675
HpySE526I ACGT 2 cut(s) 633, 914
Hsp92II CATG 6 cut(s) 30, 598, 791, 817, 890, 911
HspAI GCGC 1 cut(s) 1183
KflI GGGWCCC 1 cut(s) 205
Kpn2I TCCGGA 1 cut(s) 43
Ksp22I TGATCA 1 cut(s) 994
KspI CCGCGG 1 cut(s) 203
Kzo9I GATC 5 cut(s) 357, 591, 902, 994, 1082
LmnI GCTCC 2 cut(s) 174, 246
Lsp1109I GCAGC 2 cut(s) 91, 362
LweI GCATC 1 cut(s) 864
MaeI CTAG 3 cut(s) 194, 333, 932
MaeII ACGT 2 cut(s) 633, 914
MaeIII GTNAC 5 cut(s) 317, 323, 560, 731, 1036
MalI GATC 5 cut(s) 359, 593, 904, 996, 1084
MboI GATC 5 cut(s) 357, 591, 902, 994, 1082
MboII GAAGA 3 cut(s) 171, 229, 1030
MflI RGATCY 1 cut(s) 1082
MhlI GDGCHC 3 cut(s) 171, 587, 671
MluCI AATT 5 cut(s) 111, 175, 255, 347, 1046
MlyI GAGTC 1 cut(s) 21
MmeI TCCRAC 1 cut(s) 883
MnlI CCTC 9 cut(s) 119, 415, 481, 537, 558, 712, 715, 873, 929
Mph1103I ATGCAT 1 cut(s) 892
MroI TCCGGA 1 cut(s) 43
MseI TTAA 1 cut(s) 738
MslI CAYNNNNRTG 2 cut(s) 792, 825
MspA1I CMGCKG 1 cut(s) 202
MspI CCGG 2 cut(s) 22, 44
MspR9I CCNGG 2 cut(s) 777, 975
MvaI CCWGG 2 cut(s) 777, 975
MvnI CGCG 2 cut(s) 202, 460
MwoI GCNNNNNNNGC 2 cut(s) 768, 1182
NdeI CATATG 1 cut(s) 241
NdeII GATC 5 cut(s) 357, 591, 902, 994, 1082
NlaIII CATG 6 cut(s) 30, 598, 791, 817, 890, 911
NlaIV GGNNCC 5 cut(s) 170, 191, 206, 207, 586
NmuCI GTSAC 4 cut(s) 317, 323, 731, 1036
NsiI ATGCAT 1 cut(s) 892
NspV TTCGAA 1 cut(s) 1044
PceI AGGCCT 1 cut(s) 696
PcsI WCGNNNNNNNCGW 2 cut(s) 556, 1041
PfeI GAWTC 2 cut(s) 1024, 1139
PflFI GACNNNGTC 1 cut(s) 543
PinAI ACCGGT 1 cut(s) 21
PkrI GCNGC 3 cut(s) 106, 377, 640
PleI GAGTC 1 cut(s) 20
PpsI GAGTC 1 cut(s) 20
PpuMI RGGWCCY 1 cut(s) 205
Psp5II RGGWCCY 1 cut(s) 205
Psp6I CCWGG 2 cut(s) 775, 973
PspGI CCWGG 2 cut(s) 775, 973
PspN4I GGNNCC 5 cut(s) 170, 191, 206, 207, 586
PspPI GGNCC 6 cut(s) 46, 190, 205, 236, 455, 510
PspPPI RGGWCCY 1 cut(s) 205
PstNI CAGNNNCTG 1 cut(s) 1142
PsuI RGATCY 1 cut(s) 1082
PsyI GACNNNGTC 1 cut(s) 543
RsaI GTAC 1 cut(s) 5
RsaNI GTAC 1 cut(s) 4
RseI CAYNNNNRTG 2 cut(s) 792, 825
SacII CCGCGG 1 cut(s) 203
SaqAI TTAA 1 cut(s) 738
SatI GCNGC 3 cut(s) 105, 376, 639
Sau3AI GATC 5 cut(s) 357, 591, 902, 994, 1082
Sau96I GGNCC 6 cut(s) 46, 190, 205, 236, 455, 510
SchI GAGTC 1 cut(s) 21
ScrFI CCNGG 2 cut(s) 777, 975
SduI GDGCHC 3 cut(s) 171, 587, 671
SfaNI GCATC 1 cut(s) 864
Sfr303I CCGCGG 1 cut(s) 203
SfuI TTCGAA 1 cut(s) 1044
SgrBI CCGCGG 1 cut(s) 203
SinI GGWCC 5 cut(s) 46, 205, 236, 455, 510
SmiMI CAYNNNNRTG 2 cut(s) 792, 825
SpeI ACTAGT 1 cut(s) 332
Sse9I AATT 5 cut(s) 111, 175, 255, 347, 1046
SseBI AGGCCT 1 cut(s) 696
SsiI CCGC 7 cut(s) 157, 186, 200, 202, 458, 639, 652
SspMI CTAG 3 cut(s) 194, 333, 932
StuI AGGCCT 1 cut(s) 696
StyD4I CCNGG 2 cut(s) 775, 973
StyI CCWWGG 1 cut(s) 1101
TaaI ACNGT 3 cut(s) 122, 317, 323
TaiI ACGT 2 cut(s) 636, 917
TaqI TCGA 5 cut(s) 229, 940, 1044, 1125, 1155
TasI AATT 5 cut(s) 111, 175, 255, 347, 1046
TauI GCSGC 1 cut(s) 641
TfiI GAWTC 2 cut(s) 1024, 1139
Tru1I TTAA 1 cut(s) 738
Tru9I TTAA 1 cut(s) 738
TseFI GTSAC 4 cut(s) 317, 323, 731, 1036
TseI GCWGC 2 cut(s) 104, 375
Tsp45I GTSAC 4 cut(s) 317, 323, 731, 1036
TspDTI ATGAA 7 cut(s) 354, 380, 679, 780, 843, 958, 1037
TspGWI ACGGA 2 cut(s) 249, 1028
Tth111I GACNNNGTC 1 cut(s) 543
VpaK11BI GGWCC 5 cut(s) 46, 205, 236, 455, 510
XapI RAATTY 4 cut(s) 175, 255, 347, 1046
XcmI CCANNNNNNNNNTGG 1 cut(s) 893
XmiI GTMKAC 1 cut(s) 306
XspI CTAG 3 cut(s) 194, 333, 932
Zsp2I ATGCAT 1 cut(s) 892
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.