Rw2G003250

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr2
OG0000213
Physical Location & Seq
Forward (+)
3060964 .. 3062175
1212 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw2G003250.1

Sequence Viewer

Length: 1212 bp
ATGACCGAAAAACCGTTAAACCCGGGAAGCTACGGTGAAGAAGATGAAGAAGAAGAAAGGCGGCACCGCCATATGCACACAAGCAGCTTGAAGTTGCTGGAGGAAGACGAGTTAGTTAATAAGACTCTATATATTTGCATCTATGAACGTTATAAAACTGTACAAGTCGCCAACCGCTTTTGGGGTGCTTATGTTGTTCGCGCCATCAATCTTAGCGATTTGCTGACATCATCGCCGTCGGTGAAACTAGGACTACGGCAAGTGGCGAATAGGCCCATCGTACTTCTCCGAGGTAAAGCTGGTTGCGGTGTTTTGGGCTCCAAGTTTGTTTTTGCCGGCGGCTTGAAACGCGACTTCGGACCGTTAGGTCCATTAAGCAGTGATTACAGCACAGACGTTTATGCCTTTGATACCAAGGACCCCAAACACGGCATAGTCAAGATGCAGGAGACTTTACACAAAGGTAAATGTCAGCCGTTAATGGCTGAGGTGGCCGGAAAACTTTACACTCTGTCCAGTGGTCCCCACATTCCTGGAAGTTTCGAGGTATTTGACCCCAAACAGGGGACTTGGTCGCCCCTGCCAAACTTCCCTACAGGTGCTCGCTGGTTCTCTTATGCTATTGCGGGCACCAAGTTGTTTGCGTCCAGTGAAGGGCACTCGATACACTGCTTTGACCTTGGTGCCGCCGAACCAAAGAAAGAGGAATGGAACAGAGTCCCCAGTATGTGCCAAGGCGGCCCTTTTCCATTTCAGGACAAAGCTCTAGTGCTGGACCTGCCGCAGCCGGAACACCATAACAAGAAATTAATGTTTACCGCTACCTGTGTCTGGCCCGGGACTAGGCTAGTAGTTTATCTCATGTCCTTGGATGAAAACCAAGAAAATATCAGTGAAATCCATGTGCTGAAGCGGCCAGAGCTCCCTCGTGAAGCATGGGACCATCATTTCTTCCATCTAGGTGGAAACAATGTTTGCATTGTCGCCACCCCTTTCAAAAACACGTATGAAGAGGATGTATGGTACGAGCCTGCGATTCATACCATACAAAGTGCTGCTATACCATTTCAATTTGAGTTTGATATCTCCAAGGTGAACGATGACAAGGAGAATTGTTTTACTGTCCGATTCCAGCCTCCTCGCATTTTCGAATACTATACCGGTCCATCCTGTTCCATACCGCCTAGCCAACTTGGTTGCTTTGTGCTCTAA

Protein Analysis

403

Amino Acids

45.5

Weight (kDa)

6.21

Isoelectric Point (pI)

46.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 143 - 329 1.3e-07 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 153
AasI GACNNNNNNGTC 1 cut(s) 366
Acc36I ACCTGC 1 cut(s) 786
AccB1I GGYRCC 3 cut(s) 63, 629, 683
AccII CGCG 2 cut(s) 201, 351
AclI AACGTT 1 cut(s) 148
AcoI YGGCCR 2 cut(s) 492, 914
AcuI CTGAAG 1 cut(s) 929
AfaI GTAC 3 cut(s) 162, 282, 1025
AfiI CCNNNNNNNGG 8 cut(s) 181, 428, 562, 563, 564, 654, 831, 843
AflIII ACRYGT 1 cut(s) 1002
AgeI ACCGGT 1 cut(s) 1160
AgsI TTSAA 4 cut(s) 91, 346, 997, 1070
AjnI CCWGG 1 cut(s) 532
AluBI AGCT 5 cut(s) 30, 87, 299, 764, 922
AluI AGCT 5 cut(s) 30, 87, 299, 764, 922
Alw21I GWGCWC 3 cut(s) 604, 924, 1209
Alw26I GTCTC 1 cut(s) 443
Ama87I CYCGRG 2 cut(s) 22, 836
AoxI GGCC 5 cut(s) 272, 492, 739, 833, 914
ApeKI GCWGC 3 cut(s) 84, 784, 1055
AseI ATTAAT 1 cut(s) 809
AsiGI ACCGGT 1 cut(s) 1160
AspLEI GCGC 1 cut(s) 203
AsuC2I CCSGG 4 cut(s) 23, 24, 837, 838
AsuHPI GGTGA 3 cut(s) 47, 253, 1105
AsuII TTCGAA 1 cut(s) 1149
AvaI CYCGRG 2 cut(s) 22, 836
AvaII GGWCC 7 cut(s) 359, 368, 418, 521, 775, 940, 1163
BaeGI GKGCMC 2 cut(s) 632, 660
BanI GGYRCC 3 cut(s) 63, 629, 683
BanII GRGCYC 2 cut(s) 320, 924
BauI CACGAG 1 cut(s) 927
BbsI GAAGAC 1 cut(s) 111
Bbv12I GWGCWC 3 cut(s) 604, 924, 1209
BbvCI CCTCAGC 1 cut(s) 486
BbvI GCAGC 3 cut(s) 96, 796, 1042
BccI CCATC 5 cut(s) 212, 284, 951, 963, 1174
BceAI ACGGC 4 cut(s) 220, 272, 445, 460
BciT130I CCWGG 1 cut(s) 534
BcnI CCSGG 4 cut(s) 23, 24, 837, 838
BcoDI GTCTC 1 cut(s) 443
BfaI CTAG 6 cut(s) 248, 767, 843, 848, 959, 1185
BfmI CTRYAG 1 cut(s) 594
BfuAI ACCTGC 1 cut(s) 786
BglI GCCNNNNNGGC 1 cut(s) 738
BisI GCNGC 9 cut(s) 62, 85, 340, 687, 739, 782, 785, 914, 1056
BlsI GCNGC 9 cut(s) 63, 86, 341, 688, 740, 783, 786, 915, 1057
Bme1390I CCNGG 5 cut(s) 23, 24, 534, 837, 838
Bme18I GGWCC 7 cut(s) 359, 368, 418, 521, 775, 940, 1163
BmeT110I CYCGRG 2 cut(s) 22, 836
BmiI GGNNCC 7 cut(s) 65, 319, 420, 523, 631, 685, 941
BmrFI CCNGG 5 cut(s) 23, 24, 534, 837, 838
BmrI ACTGGG 1 cut(s) 717
BmsI GCATC 2 cut(s) 147, 432
BmuI ACTGGG 1 cut(s) 717
BpiI GAAGAC 1 cut(s) 111
BpmI CTGGAG 1 cut(s) 119
Bpu10I CCTNAGC 1 cut(s) 486
Bpu14I TTCGAA 1 cut(s) 1149
BpuMI CCSGG 4 cut(s) 23, 24, 837, 838
BsaAI YACGTR 1 cut(s) 1005
BsaJI CCNNGG 8 cut(s) 22, 289, 414, 679, 733, 836, 867, 1089
BsaWI WCCGGW 1 cut(s) 1160
Bsc4I CCNNNNNNNGG 8 cut(s) 181, 428, 562, 563, 564, 654, 831, 843
Bse118I RCCGGY 2 cut(s) 335, 1160
Bse1I ACTGG 3 cut(s) 516, 648, 723
BseBI CCWGG 1 cut(s) 534
BseDI CCNNGG 8 cut(s) 22, 289, 414, 679, 733, 836, 867, 1089
BseGI GGATG 3 cut(s) 877, 1021, 1166
BseLI CCNNNNNNNGG 8 cut(s) 181, 428, 562, 563, 564, 654, 831, 843
BseMII CTCAG 1 cut(s) 477
BseNI ACTGG 3 cut(s) 516, 648, 723
BseRI GAGGAG 1 cut(s) 1128
BseSI GKGCMC 2 cut(s) 632, 660
BseXI GCAGC 3 cut(s) 96, 796, 1042
Bsh1236I CGCG 2 cut(s) 201, 351
BshFI GGCC 5 cut(s) 274, 494, 741, 835, 916
BshNI GGYRCC 3 cut(s) 63, 629, 683
BshTI ACCGGT 1 cut(s) 1160
BsiHKAI GWGCWC 3 cut(s) 604, 924, 1209
BsiHKCI CYCGRG 2 cut(s) 22, 836
BsiSI CCGG 6 cut(s) 23, 336, 495, 788, 837, 1161
BslFI GGGAC 5 cut(s) 507, 580, 704, 853, 953
BslI CCNNNNNNNGG 8 cut(s) 181, 428, 562, 563, 564, 654, 831, 843
BsmAI GTCTC 1 cut(s) 443
BsmFI GGGAC 5 cut(s) 507, 580, 704, 853, 953
BsnI GGCC 5 cut(s) 274, 494, 741, 835, 916
BsoBI CYCGRG 2 cut(s) 22, 836
Bsp119I TTCGAA 1 cut(s) 1149
Bsp1286I GDGCHC 6 cut(s) 320, 604, 632, 660, 924, 1209
Bsp1407I TGTACA 1 cut(s) 160
BspANI GGCC 5 cut(s) 274, 494, 741, 835, 916
BspCNI CTCAG 1 cut(s) 478
BspFNI CGCG 2 cut(s) 201, 351
BspLI GGNNCC 7 cut(s) 65, 319, 420, 523, 631, 685, 941
BspMI ACCTGC 1 cut(s) 786
BspT104I TTCGAA 1 cut(s) 1149
BspT107I GGYRCC 3 cut(s) 63, 629, 683
BsrFI RCCGGY 2 cut(s) 335, 1160
BsrGI TGTACA 1 cut(s) 160
BsrI ACTGG 3 cut(s) 516, 648, 723
BssAI RCCGGY 2 cut(s) 335, 1160
BssECI CCNNGG 8 cut(s) 22, 289, 414, 679, 733, 836, 867, 1089
BssSI CACGAG 1 cut(s) 927
BssT1I CCWWGG 5 cut(s) 414, 679, 733, 867, 1089
Bst2BI CACGAG 1 cut(s) 927
Bst2UI CCWGG 1 cut(s) 534
Bst4CI ACNGT 5 cut(s) 15, 35, 160, 363, 1123
Bst6I CTCTTC 1 cut(s) 1005
BstAUI TGTACA 1 cut(s) 160
BstBAI YACGTR 1 cut(s) 1005
BstBI TTCGAA 1 cut(s) 1149
BstC8I GCNNGC 4 cut(s) 337, 604, 628, 1032
BstDEI CTNAG 2 cut(s) 212, 486
BstF5I GGATG 3 cut(s) 877, 1021, 1166
BstFNI CGCG 2 cut(s) 201, 351
BstHHI GCGC 1 cut(s) 203
BstMAI GTCTC 1 cut(s) 443
BstMWI GCNNNNNNNGC 6 cut(s) 348, 491, 738, 778, 913, 919
BstNI CCWGG 1 cut(s) 534
BstSCI CCNGG 5 cut(s) 21, 22, 532, 835, 836
BstSFI CTRYAG 1 cut(s) 594
BstSLI GKGCMC 2 cut(s) 632, 660
BstUI CGCG 2 cut(s) 201, 351
BstV1I GCAGC 3 cut(s) 96, 796, 1042
BstV2I GAAGAC 1 cut(s) 111
BstXI CCANNNNNNTGG 2 cut(s) 533, 962
BsuRI GGCC 5 cut(s) 274, 494, 741, 835, 916
BtgZI GCGATG 1 cut(s) 216
BtsCI GGATG 3 cut(s) 877, 1021, 1166
BtsI GCAGTG 2 cut(s) 385, 667
BtsIMutI CAGTG 5 cut(s) 385, 523, 655, 667, 898
BveI ACCTGC 1 cut(s) 786
Cac8I GCNNGC 4 cut(s) 337, 604, 628, 1032
CfoI GCGC 1 cut(s) 203
Cfr10I RCCGGY 2 cut(s) 335, 1160
Cfr9I CCCGGG 2 cut(s) 22, 836
CpoI CGGWCCG 1 cut(s) 359
CseI GACGC 1 cut(s) 633
Csp6I GTAC 3 cut(s) 161, 281, 1024
CspAI ACCGGT 1 cut(s) 1160
CspI CGGWCCG 1 cut(s) 359
CviAII CATG 3 cut(s) 862, 902, 936
CviQI GTAC 3 cut(s) 161, 281, 1024
DdeI CTNAG 2 cut(s) 212, 486
DrdI GACNNNNNNGTC 1 cut(s) 366
DseDI GACNNNNNNGTC 1 cut(s) 366
EaeI YGGCCR 2 cut(s) 492, 914
Eam1104I CTCTTC 1 cut(s) 1005
EarI CTCTTC 1 cut(s) 1005
Ecl136II GAGCTC 1 cut(s) 922
Eco130I CCWWGG 5 cut(s) 414, 679, 733, 867, 1089
Eco24I GRGCYC 2 cut(s) 320, 924
Eco32I GATATC 1 cut(s) 1084
Eco47I GGWCC 7 cut(s) 359, 368, 418, 521, 775, 940, 1163
Eco53kI GAGCTC 1 cut(s) 922
Eco57I CTGAAG 1 cut(s) 929
Eco88I CYCGRG 2 cut(s) 22, 836
EcoICRI GAGCTC 1 cut(s) 922
EcoO109I RGGNCCY 1 cut(s) 418
EcoRII CCWGG 1 cut(s) 532
EcoRV GATATC 1 cut(s) 1084
EcoT14I CCWWGG 5 cut(s) 414, 679, 733, 867, 1089
EcoT38I GRGCYC 2 cut(s) 320, 924
ErhI CCWWGG 5 cut(s) 414, 679, 733, 867, 1089
FaeI CATG 3 cut(s) 865, 905, 939
FaqI GGGAC 5 cut(s) 507, 580, 704, 853, 953
FatI CATG 3 cut(s) 861, 901, 935
FauI CCCGC 1 cut(s) 619
FauNDI CATATG 1 cut(s) 72
Fnu4HI GCNGC 9 cut(s) 62, 85, 340, 687, 739, 782, 785, 914, 1056
FokI GGATG 3 cut(s) 884, 1028, 1153
FriOI GRGCYC 2 cut(s) 320, 924
Fsp4HI GCNGC 9 cut(s) 62, 85, 340, 687, 739, 782, 785, 914, 1056
FspBI CTAG 6 cut(s) 248, 767, 843, 848, 959, 1185
GlaI GCGC 1 cut(s) 202
GluI GCNGC 9 cut(s) 62, 85, 340, 687, 739, 782, 785, 914, 1056
GsuI CTGGAG 1 cut(s) 119
HaeIII GGCC 5 cut(s) 274, 494, 741, 835, 916
HapII CCGG 6 cut(s) 23, 336, 495, 788, 837, 1161
HgaI GACGC 1 cut(s) 633
HhaI GCGC 1 cut(s) 203
Hin1II CATG 3 cut(s) 865, 905, 939
Hin6I GCGC 1 cut(s) 201
HinP1I GCGC 1 cut(s) 201
HinfI GANTC 4 cut(s) 124, 717, 1036, 1128
HpaII CCGG 6 cut(s) 23, 336, 495, 788, 837, 1161
HphI GGTGA 3 cut(s) 47, 253, 1105
Hpy166II GTNNAC 2 cut(s) 816, 1096
Hpy188I TCNGA 3 cut(s) 290, 359, 1127
Hpy188III TCNNGA 3 cut(s) 439, 755, 929
Hpy8I GTNNAC 2 cut(s) 816, 1096
Hpy99I CGWCG 1 cut(s) 241
HpyAV CCTTC 1 cut(s) 647
HpyCH4III ACNGT 5 cut(s) 15, 35, 160, 363, 1123
HpyCH4IV ACGT 3 cut(s) 148, 396, 1004
HpyCH4V TGCA 4 cut(s) 76, 138, 445, 978
HpyF10VI GCNNNNNNNGC 6 cut(s) 348, 491, 738, 778, 913, 919
HpyF3I CTNAG 2 cut(s) 212, 486
HpySE526I ACGT 3 cut(s) 148, 396, 1004
Hsp92II CATG 3 cut(s) 865, 905, 939
HspAI GCGC 1 cut(s) 201
KroI GCCGGC 1 cut(s) 335
KroNI GCCGGC 1 cut(s) 337
LmnI GCTCC 2 cut(s) 323, 927
Lsp1109I GCAGC 3 cut(s) 96, 796, 1042
LweI GCATC 2 cut(s) 147, 432
MaeI CTAG 6 cut(s) 248, 767, 843, 848, 959, 1185
MaeII ACGT 3 cut(s) 148, 396, 1004
MboII GAAGA 8 cut(s) 50, 53, 59, 62, 65, 116, 943, 1022
MhlI GDGCHC 6 cut(s) 320, 604, 632, 660, 924, 1209
MluCI AATT 3 cut(s) 806, 1070, 1111
MlyI GAGTC 2 cut(s) 118, 726
MnlI CCTC 9 cut(s) 94, 284, 481, 538, 697, 936, 1006, 1146, 1149
MroNI GCCGGC 1 cut(s) 335
MseI TTAA 5 cut(s) 17, 117, 374, 479, 809
MslI CAYNNNNRTG 1 cut(s) 960
MspI CCGG 6 cut(s) 23, 336, 495, 788, 837, 1161
MspR9I CCNGG 5 cut(s) 23, 24, 534, 837, 838
MvaI CCWGG 1 cut(s) 534
MvnI CGCG 2 cut(s) 201, 351
MwoI GCNNNNNNNGC 6 cut(s) 348, 491, 738, 778, 913, 919
NaeI GCCGGC 1 cut(s) 337
NciI CCSGG 4 cut(s) 23, 24, 837, 838
NdeI CATATG 1 cut(s) 72
NgoMIV GCCGGC 1 cut(s) 335
NlaIII CATG 3 cut(s) 865, 905, 939
NlaIV GGNNCC 7 cut(s) 65, 319, 420, 523, 631, 685, 941
NspV TTCGAA 1 cut(s) 1149
PdiI GCCGGC 1 cut(s) 337
PfeI GAWTC 2 cut(s) 1036, 1128
PflFI GACNNNGTC 1 cut(s) 571
PfoI TCCNGGA 1 cut(s) 532
PinAI ACCGGT 1 cut(s) 1160
PkrI GCNGC 9 cut(s) 63, 86, 341, 688, 740, 783, 786, 915, 1057
PleI GAGTC 2 cut(s) 118, 725
PpsI GAGTC 2 cut(s) 118, 725
Ppu21I YACGTR 1 cut(s) 1005
PpuMI RGGWCCY 1 cut(s) 418
PshBI ATTAAT 1 cut(s) 809
PsiI TTATAA 1 cut(s) 153
Psp124BI GAGCTC 1 cut(s) 924
Psp1406I AACGTT 1 cut(s) 148
Psp5II RGGWCCY 1 cut(s) 418
Psp6I CCWGG 1 cut(s) 532
PspGI CCWGG 1 cut(s) 532
PspN4I GGNNCC 7 cut(s) 65, 319, 420, 523, 631, 685, 941
PspPPI RGGWCCY 1 cut(s) 418
PsyI GACNNNGTC 1 cut(s) 571
RsaI GTAC 3 cut(s) 162, 282, 1025
RsaNI GTAC 3 cut(s) 161, 281, 1024
RseI CAYNNNNRTG 1 cut(s) 960
Rsr2I CGGWCCG 1 cut(s) 359
RsrII CGGWCCG 1 cut(s) 359
SacI GAGCTC 1 cut(s) 924
SaqAI TTAA 5 cut(s) 17, 117, 374, 479, 809
SatI GCNGC 9 cut(s) 62, 85, 340, 687, 739, 782, 785, 914, 1056
SchI GAGTC 2 cut(s) 118, 726
ScrFI CCNGG 5 cut(s) 23, 24, 534, 837, 838
SduI GDGCHC 6 cut(s) 320, 604, 632, 660, 924, 1209
SfaNI GCATC 2 cut(s) 147, 432
SfcI CTRYAG 1 cut(s) 594
SfuI TTCGAA 1 cut(s) 1149
SinI GGWCC 7 cut(s) 359, 368, 418, 521, 775, 940, 1163
SmaI CCCGGG 2 cut(s) 24, 838
SmiMI CAYNNNNRTG 1 cut(s) 960
Sse9I AATT 3 cut(s) 806, 1070, 1111
SspMI CTAG 6 cut(s) 248, 767, 843, 848, 959, 1185
SstI GAGCTC 1 cut(s) 924
StyD4I CCNGG 5 cut(s) 21, 22, 532, 835, 836
StyI CCWWGG 5 cut(s) 414, 679, 733, 867, 1089
TaaI ACNGT 5 cut(s) 15, 35, 160, 363, 1123
TaiI ACGT 3 cut(s) 151, 399, 1007
TaqI TCGA 3 cut(s) 543, 662, 1149
TaqII GACCGA 1 cut(s) 20
TasI AATT 3 cut(s) 806, 1070, 1111
TatI WGTACW 1 cut(s) 160
TauI GCSGC 6 cut(s) 64, 342, 689, 741, 784, 916
TfiI GAWTC 2 cut(s) 1036, 1128
Tru1I TTAA 5 cut(s) 17, 117, 374, 479, 809
Tru9I TTAA 5 cut(s) 17, 117, 374, 479, 809
TscAI CASTG 5 cut(s) 385, 523, 655, 674, 898
TseI GCWGC 3 cut(s) 84, 784, 1055
TspDTI ATGAA 5 cut(s) 60, 159, 888, 1023, 1028
TspMI CCCGGG 2 cut(s) 22, 836
TspRI CASTG 5 cut(s) 385, 523, 655, 674, 898
Tth111I GACNNNGTC 1 cut(s) 571
VpaK11BI GGWCC 7 cut(s) 359, 368, 418, 521, 775, 940, 1163
VspI ATTAAT 1 cut(s) 809
XmaI CCCGGG 2 cut(s) 22, 836
XspI CTAG 6 cut(s) 248, 767, 843, 848, 959, 1185
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.