Rmu_sc0020367.1_g000002

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0020367.1
OG0000213
Physical Location & Seq
Forward (+)
2905 .. 4209
1305 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0020367.1_g000002.1.cds

Sequence Viewer

Length: 1305 bp
atgtccccgaaaaccagtctcaacctagccaacagagccagcaacggcgaagacgaacggcgtcatcggcttcgacgctgctgtgaaccactgcatcataaggctgataagcacaggaggtctaagaagaagaagaagagaagtgagaagttgaagttgaagttgaacgaggaggaggctaacaagtctctgtacatatgtcacattgagcaccaccctggaaggtgggtcgcttatgttgtccgcgccatcaacttgtccgatttgttgtcatcatcagaagacgatgatggtttgcaattacggcaggtgggctataaggccggggatgaactcccgggttctgtgggttgcggtgtgtggggatctcggattgttctcgctgccggcatgaaaccctgcggccgtatgccttcatttgatcgtcccgacatagtttggcatagagatgtttacgcctttgaaactgaccccaacaagcagcctcgtgataatagtagaattaccaagatgggtggcacattagttgaagccaagtttcttcctctgatggaggaggtggggggcaaactgtatgcactttcatatacgctggtggctgatcctccctcatttgaggtattcgacccgaaagtggggagttgggcgcccctgccccagcctccattcttcaaacgtcttggtcagtataaccgcggtggcttcctctcttatgcagttactggcaccaagatgtttgtgtctcaggcgagatgtcctgtgttctgtttcgatgtagctcacccagacagagaatggagattagtctcttctatgtgccaacgcggcccttttccttttgtaaacaaagctttggtcctggacctgccggcgggtgctgatgacaagaagaagataatgtttgcctatagttttggtcgttggtatctaggagtttatcttatgtccttggaagaaaatcaagaatctatcacccgaattggtgattttcagctgccaaggttgcctcaggaatatgaatttgcacaaagatgttattttgtccatataggaggtcaaaaagcctgcattgttgcccccgaattggttaggccatataaacaaggacctgatattaacgaggctgggactaataggacacagggtgttgccataccatttcaatttgaagttgatatcaccaaggtcgacaaggacgagaagaattgtttgaccctccaattcatgcctactcgtatcttcgaattctataccaacccgtccacttttcctgatcctgaagcaacaggttgctttgtgctataa

Protein Analysis

434

Amino Acids

49.34

Weight (kDa)

8.85

Isoelectric Point (pI)

51.54

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 298
Acc36I ACCTGC 2 cut(s) 298, 873
AccB1I GGYRCC 2 cut(s) 646, 725
AccI GTMKAC 1 cut(s) 1188
AccII CGCG 3 cut(s) 246, 696, 825
AciI CCGC 7 cut(s) 244, 354, 402, 694, 696, 825, 872
AclWI GGATC 3 cut(s) 373, 596, 1268
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 2 cut(s) 1019, 1244
AcuI CTGAAG 1 cut(s) 1299
AcyI GRCGYC 2 cut(s) 61, 647
AdeI CACNNNGTG 1 cut(s) 1145
AfaI GTAC 1 cut(s) 194
AfiI CCNNNNNNNGG 4 cut(s) 634, 635, 871, 1084
AgsI TTSAA 8 cut(s) 154, 160, 166, 464, 530, 673, 1163, 1169
AjnI CCWGG 2 cut(s) 217, 858
AluBI AGCT 3 cut(s) 779, 851, 994
AluI AGCT 3 cut(s) 779, 851, 994
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 4 cut(s) 23, 192, 747, 811
AlwI GGATC 3 cut(s) 373, 596, 1268
AlwNI CAGNNNCTG 1 cut(s) 722
Ama87I CYCGRG 1 cut(s) 337
AoxI GGCC 4 cut(s) 321, 403, 826, 1091
ApeKI GCWGC 4 cut(s) 78, 383, 481, 994
ApoI RAATTY 2 cut(s) 1019, 1244
ArsI GACNNNNNNTTYG 2 cut(s) 840, 872
AspLEI GCGC 2 cut(s) 248, 649
AspS9I GGNCC 4 cut(s) 827, 856, 862, 1106
AsuC2I CCSGG 3 cut(s) 325, 338, 339
AsuHPI GGTGA 4 cut(s) 773, 964, 995, 1171
AsuII TTCGAA 1 cut(s) 1242
AvaI CYCGRG 1 cut(s) 337
AvaII GGWCC 3 cut(s) 856, 862, 1106
AxyI CCTNAGG 1 cut(s) 1008
BanI GGYRCC 2 cut(s) 646, 725
BauI CACGAG 1 cut(s) 486
BbsI GAAGAC 2 cut(s) 57, 288
Bbv12I GWGCWC 1 cut(s) 213
BbvI GCAGC 4 cut(s) 65, 370, 493, 981
BccI CCATC 4 cut(s) 257, 284, 505, 544
BceAI ACGGC 4 cut(s) 61, 74, 320, 390
BciT130I CCWGG 2 cut(s) 219, 860
BcnI CCSGG 3 cut(s) 325, 338, 339
BcoDI GTCTC 4 cut(s) 23, 192, 747, 811
BfaI CTAG 2 cut(s) 26, 929
BfmI CTRYAG 1 cut(s) 907
BfoI RGCGCY 1 cut(s) 650
BfuAI ACCTGC 2 cut(s) 298, 873
BglI GCCNNNNNGGC 1 cut(s) 825
BisI GCNGC 6 cut(s) 79, 384, 403, 482, 826, 995
BlsI GCNGC 6 cut(s) 80, 385, 404, 483, 827, 996
Bme1390I CCNGG 5 cut(s) 219, 325, 338, 339, 860
Bme18I GGWCC 3 cut(s) 856, 862, 1106
BmeT110I CYCGRG 1 cut(s) 337
BmgT120I GGNCC 4 cut(s) 827, 856, 862, 1106
BmiI GGNNCC 2 cut(s) 648, 727
BmrFI CCNGG 5 cut(s) 219, 325, 338, 339, 860
BmsI GCATC 1 cut(s) 103
BpiI GAAGAC 2 cut(s) 57, 288
Bpu14I TTCGAA 1 cut(s) 1242
BpuMI CCSGG 3 cut(s) 325, 338, 339
BsaHI GRCGYC 2 cut(s) 61, 647
BsaJI CCNNGG 7 cut(s) 217, 324, 337, 694, 948, 998, 1182
Bsc4I CCNNNNNNNGG 4 cut(s) 634, 635, 871, 1084
Bse118I RCCGGY 2 cut(s) 386, 868
Bse1I ACTGG 2 cut(s) 15, 727
Bse21I CCTNAGG 1 cut(s) 1008
BseBI CCWGG 2 cut(s) 219, 860
BseDI CCNNGG 7 cut(s) 217, 324, 337, 694, 948, 998, 1182
BseGI GGATG 1 cut(s) 334
BseLI CCNNNNNNNGG 4 cut(s) 634, 635, 871, 1084
BseMII CTCAG 2 cut(s) 758, 1022
BseNI ACTGG 2 cut(s) 15, 727
BseRI GAGGAG 3 cut(s) 185, 188, 569
BseX3I CGGCCG 1 cut(s) 403
BseXI GCAGC 4 cut(s) 65, 370, 493, 981
BseYI CCCAGC 2 cut(s) 657, 1124
Bsh1236I CGCG 3 cut(s) 246, 696, 825
Bsh1285I CGRYCG 1 cut(s) 406
BshFI GGCC 4 cut(s) 323, 405, 828, 1093
BshNI GGYRCC 2 cut(s) 646, 725
BsiEI CGRYCG 1 cut(s) 406
BsiHKAI GWGCWC 1 cut(s) 213
BsiHKCI CYCGRG 1 cut(s) 337
BsiSI CCGG 4 cut(s) 324, 338, 387, 869
BslFI GGGAC 2 cut(s) 411, 1141
BslI CCNNNNNNNGG 4 cut(s) 634, 635, 871, 1084
BsmAI GTCTC 4 cut(s) 23, 192, 747, 811
BsmFI GGGAC 2 cut(s) 411, 1141
BsnI GGCC 4 cut(s) 323, 405, 828, 1093
BsoBI CYCGRG 1 cut(s) 337
Bsp119I TTCGAA 1 cut(s) 1242
Bsp1286I GDGCHC 1 cut(s) 213
Bsp1407I TGTACA 1 cut(s) 192
Bsp143I GATC 4 cut(s) 365, 421, 601, 1273
BspACI CCGC 7 cut(s) 244, 354, 402, 694, 696, 825, 872
BspANI GGCC 4 cut(s) 323, 405, 828, 1093
BspCNI CTCAG 2 cut(s) 757, 1021
BspFNI CGCG 3 cut(s) 246, 696, 825
BspLI GGNNCC 2 cut(s) 648, 727
BspMI ACCTGC 2 cut(s) 298, 873
BspPI GGATC 3 cut(s) 373, 596, 1268
BspT104I TTCGAA 1 cut(s) 1242
BspT107I GGYRCC 2 cut(s) 646, 725
BsrFI RCCGGY 2 cut(s) 386, 868
BsrGI TGTACA 1 cut(s) 192
BsrI ACTGG 2 cut(s) 15, 727
BssAI RCCGGY 2 cut(s) 386, 868
BssECI CCNNGG 7 cut(s) 217, 324, 337, 694, 948, 998, 1182
BssMI GATC 4 cut(s) 365, 421, 601, 1273
BssNI GRCGYC 2 cut(s) 61, 647
BssSI CACGAG 1 cut(s) 486
BssT1I CCWWGG 3 cut(s) 948, 998, 1182
Bst2BI CACGAG 1 cut(s) 486
Bst2UI CCWGG 2 cut(s) 219, 860
Bst4CI ACNGT 1 cut(s) 573
Bst6I CTCTTC 2 cut(s) 131, 814
BstACI GRCGYC 2 cut(s) 61, 647
BstAUI TGTACA 1 cut(s) 192
BstBI TTCGAA 1 cut(s) 1242
BstC8I GCNNGC 4 cut(s) 40, 388, 870, 1066
BstDEI CTNAG 3 cut(s) 123, 744, 1008
BstDSI CCRYGG 1 cut(s) 694
BstF5I GGATG 1 cut(s) 334
BstFNI CGCG 3 cut(s) 246, 696, 825
BstH2I RGCGCY 1 cut(s) 650
BstHHI GCGC 2 cut(s) 248, 649
BstKTI GATC 4 cut(s) 368, 424, 604, 1276
BstMAI GTCTC 4 cut(s) 23, 192, 747, 811
BstMBI GATC 4 cut(s) 365, 421, 601, 1273
BstMCI CGRYCG 1 cut(s) 406
BstMWI GCNNNNNNNGC 5 cut(s) 35, 67, 304, 825, 1003
BstNI CCWGG 2 cut(s) 219, 860
BstSCI CCNGG 5 cut(s) 217, 323, 336, 337, 858
BstSFI CTRYAG 1 cut(s) 907
BstUI CGCG 3 cut(s) 246, 696, 825
BstV1I GCAGC 4 cut(s) 65, 370, 493, 981
BstV2I GAAGAC 2 cut(s) 57, 288
BstX2I RGATCY 1 cut(s) 365
BstYI RGATCY 1 cut(s) 365
BstZI CGGCCG 1 cut(s) 403
Bsu36I CCTNAGG 1 cut(s) 1008
BsuRI GGCC 4 cut(s) 323, 405, 828, 1093
BtgI CCRYGG 1 cut(s) 694
BtsCI GGATG 1 cut(s) 334
BtsI GCAGTG 1 cut(s) 89
BtsIMutI CAGTG 1 cut(s) 89
BveI ACCTGC 2 cut(s) 298, 873
Cac8I GCNNGC 4 cut(s) 40, 388, 870, 1066
CaiI CAGNNNCTG 1 cut(s) 722
CfoI GCGC 2 cut(s) 248, 649
Cfr10I RCCGGY 2 cut(s) 386, 868
Cfr13I GGNCC 4 cut(s) 827, 856, 862, 1106
Cfr42I CCGCGG 1 cut(s) 697
Cfr9I CCCGGG 1 cut(s) 337
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 1 cut(s) 193
CspCI CAANNNNNGTGG 2 cut(s) 496, 531
CviAII CATG 2 cut(s) 391, 1225
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 3 cut(s) 123, 744, 1008
DinI GGCGCC 1 cut(s) 648
DpnI GATC 4 cut(s) 367, 423, 603, 1275
DpnII GATC 4 cut(s) 365, 421, 601, 1273
DraIII CACNNNGTG 1 cut(s) 1145
EaeI YGGCCR 1 cut(s) 403
EagI CGGCCG 1 cut(s) 403
Eam1104I CTCTTC 2 cut(s) 131, 814
EarI CTCTTC 2 cut(s) 131, 814
EclXI CGGCCG 1 cut(s) 403
Eco130I CCWWGG 3 cut(s) 948, 998, 1182
Eco32I GATATC 1 cut(s) 1177
Eco47I GGWCC 3 cut(s) 856, 862, 1106
Eco52I CGGCCG 1 cut(s) 403
Eco57I CTGAAG 1 cut(s) 1299
Eco81I CCTNAGG 1 cut(s) 1008
Eco88I CYCGRG 1 cut(s) 337
EcoO109I RGGNCCY 1 cut(s) 1106
EcoRI GAATTC 1 cut(s) 1244
EcoRII CCWGG 2 cut(s) 217, 858
EcoRV GATATC 1 cut(s) 1177
EcoT14I CCWWGG 3 cut(s) 948, 998, 1182
EgeI GGCGCC 1 cut(s) 648
EheI GGCGCC 1 cut(s) 648
ErhI CCWWGG 3 cut(s) 948, 998, 1182
FaeI CATG 2 cut(s) 394, 1228
FaqI GGGAC 2 cut(s) 411, 1141
FatI CATG 2 cut(s) 390, 1224
FauI CCCGC 1 cut(s) 865
FauNDI CATATG 1 cut(s) 197
FblI GTMKAC 1 cut(s) 1188
Fnu4HI GCNGC 6 cut(s) 79, 384, 403, 482, 826, 995
FokI GGATG 1 cut(s) 341
Fsp4HI GCNGC 6 cut(s) 79, 384, 403, 482, 826, 995
FspBI CTAG 2 cut(s) 26, 929
GlaI GCGC 2 cut(s) 247, 648
GluI GCNGC 6 cut(s) 79, 384, 403, 482, 826, 995
GsaI CCCAGC 2 cut(s) 661, 1128
HaeII RGCGCY 1 cut(s) 650
HaeIII GGCC 4 cut(s) 323, 405, 828, 1093
HapII CCGG 4 cut(s) 324, 338, 387, 869
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 2 cut(s) 248, 649
Hin1I GRCGYC 2 cut(s) 61, 647
Hin1II CATG 2 cut(s) 394, 1228
Hin6I GCGC 2 cut(s) 246, 647
HinP1I GCGC 2 cut(s) 246, 647
HincII GTYRAC 1 cut(s) 1189
HindII GTYRAC 1 cut(s) 1189
HindIII AAGCTT 1 cut(s) 849
HinfI GANTC 1 cut(s) 965
HpaII CCGG 4 cut(s) 324, 338, 387, 869
HphI GGTGA 4 cut(s) 773, 964, 995, 1171
Hpy166II GTNNAC 5 cut(s) 86, 454, 844, 1189, 1263
Hpy188I TCNGA 4 cut(s) 262, 280, 372, 549
Hpy188III TCNNGA 6 cut(s) 428, 488, 962, 1010, 1271, 1277
Hpy8I GTNNAC 5 cut(s) 86, 454, 844, 1189, 1263
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 216, 423
HpyCH4III ACNGT 1 cut(s) 573
HpyCH4IV ACGT 1 cut(s) 676
HpyCH4V TGCA 6 cut(s) 94, 298, 578, 716, 1025, 1068
HpyF10VI GCNNNNNNNGC 5 cut(s) 35, 67, 304, 825, 1003
HpyF3I CTNAG 3 cut(s) 123, 744, 1008
HpySE526I ACGT 1 cut(s) 676
Hsp92I GRCGYC 2 cut(s) 61, 647
Hsp92II CATG 2 cut(s) 394, 1228
HspAI GCGC 2 cut(s) 246, 647
KasI GGCGCC 1 cut(s) 646
KroI GCCGGC 2 cut(s) 386, 868
KroNI GCCGGC 2 cut(s) 388, 870
KspI CCGCGG 1 cut(s) 697
Kzo9I GATC 4 cut(s) 365, 421, 601, 1273
Lsp1109I GCAGC 4 cut(s) 65, 370, 493, 981
LweI GCATC 1 cut(s) 103
MaeI CTAG 2 cut(s) 26, 929
MaeII ACGT 1 cut(s) 676
MaeIII GTNAC 2 cut(s) 200, 718
MalI GATC 4 cut(s) 367, 423, 603, 1275
MboI GATC 4 cut(s) 365, 421, 601, 1273
MflI RGATCY 1 cut(s) 365
MhlI GDGCHC 1 cut(s) 213
MluCI AATT 9 cut(s) 299, 501, 978, 1019, 1082, 1163, 1204, 1220, 1244
Mly113I GGCGCC 1 cut(s) 647
MroNI GCCGGC 2 cut(s) 386, 868
MseI TTAA 1 cut(s) 1116
MslI CAYNNNNRTG 3 cut(s) 447, 731, 1030
MspA1I CMGCKG 2 cut(s) 696, 994
MspI CCGG 4 cut(s) 324, 338, 387, 869
MspR9I CCNGG 5 cut(s) 219, 325, 338, 339, 860
MvaI CCWGG 2 cut(s) 219, 860
MvnI CGCG 3 cut(s) 246, 696, 825
MwoI GCNNNNNNNGC 5 cut(s) 35, 67, 304, 825, 1003
NaeI GCCGGC 2 cut(s) 388, 870
NarI GGCGCC 1 cut(s) 647
NciI CCSGG 3 cut(s) 325, 338, 339
NdeI CATATG 1 cut(s) 197
NdeII GATC 4 cut(s) 365, 421, 601, 1273
NgoMIV GCCGGC 2 cut(s) 386, 868
NlaIII CATG 2 cut(s) 394, 1228
NlaIV GGNNCC 2 cut(s) 648, 727
NmuCI GTSAC 1 cut(s) 200
NspV TTCGAA 1 cut(s) 1242
PaqCI CACCTGC 1 cut(s) 298
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 1194
PdiI GCCGGC 2 cut(s) 388, 870
PfeI GAWTC 1 cut(s) 965
PfoI TCCNGGA 1 cut(s) 858
PkrI GCNGC 6 cut(s) 80, 385, 404, 483, 827, 996
PluTI GGCGCC 1 cut(s) 650
PpuMI RGGWCCY 1 cut(s) 1106
Psp5II RGGWCCY 1 cut(s) 1106
Psp6I CCWGG 2 cut(s) 217, 858
PspFI CCCAGC 2 cut(s) 657, 1124
PspGI CCWGG 2 cut(s) 217, 858
PspN4I GGNNCC 2 cut(s) 648, 727
PspPI GGNCC 4 cut(s) 827, 856, 862, 1106
PspPPI RGGWCCY 1 cut(s) 1106
PstNI CAGNNNCTG 1 cut(s) 722
PsuI RGATCY 1 cut(s) 365
PvuII CAGCTG 1 cut(s) 994
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 3 cut(s) 447, 731, 1030
SacII CCGCGG 1 cut(s) 697
SalI GTCGAC 1 cut(s) 1187
SaqAI TTAA 1 cut(s) 1116
SatI GCNGC 6 cut(s) 79, 384, 403, 482, 826, 995
Sau3AI GATC 4 cut(s) 365, 421, 601, 1273
Sau96I GGNCC 4 cut(s) 827, 856, 862, 1106
ScrFI CCNGG 5 cut(s) 219, 325, 338, 339, 860
SduI GDGCHC 1 cut(s) 213
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 907
SfoI GGCGCC 1 cut(s) 648
Sfr303I CCGCGG 1 cut(s) 697
SfuI TTCGAA 1 cut(s) 1242
SgrBI CCGCGG 1 cut(s) 697
SinI GGWCC 3 cut(s) 856, 862, 1106
SmaI CCCGGG 1 cut(s) 339
SmiMI CAYNNNNRTG 3 cut(s) 447, 731, 1030
Sse9I AATT 9 cut(s) 299, 501, 978, 1019, 1082, 1163, 1204, 1220, 1244
SsiI CCGC 7 cut(s) 244, 354, 402, 694, 696, 825, 872
SspDI GGCGCC 1 cut(s) 646
SspMI CTAG 2 cut(s) 26, 929
StyD4I CCNGG 5 cut(s) 217, 323, 336, 337, 858
StyI CCWWGG 3 cut(s) 948, 998, 1182
TaaI ACNGT 1 cut(s) 573
TaiI ACGT 1 cut(s) 679
TaqI TCGA 5 cut(s) 73, 624, 771, 1188, 1242
TasI AATT 9 cut(s) 299, 501, 978, 1019, 1082, 1163, 1204, 1220, 1244
TatI WGTACW 1 cut(s) 192
TauI GCSGC 2 cut(s) 405, 828
TfiI GAWTC 1 cut(s) 965
Tru1I TTAA 1 cut(s) 1116
Tru9I TTAA 1 cut(s) 1116
TscAI CASTG 1 cut(s) 96
TseFI GTSAC 1 cut(s) 200
TseI GCWGC 4 cut(s) 78, 383, 481, 994
Tsp45I GTSAC 1 cut(s) 200
TspDTI ATGAA 6 cut(s) 345, 405, 407, 573, 1032, 1213
TspMI CCCGGG 1 cut(s) 337
TspRI CASTG 1 cut(s) 96
VpaK11BI GGWCC 3 cut(s) 856, 862, 1106
XapI RAATTY 2 cut(s) 1019, 1244
XcmI CCANNNNNNNNNTGG 1 cut(s) 792
XmaI CCCGGG 1 cut(s) 337
XmiI GTMKAC 1 cut(s) 1188
XspI CTAG 2 cut(s) 26, 929
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.