Rmu_sc0040185.1_g000002

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0040185.1
OG0000213
Physical Location & Seq
Forward (+)
2914 .. 6685
3772 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0040185.1_g000002.1.cds

Sequence Viewer

Length: 1227 bp
atgtcccccaaaaccagtctcaacctagccaacagagccagcaacggcgaagacgaacggcgtcatcggcttcgacgctgctgtgaaccactgcatcataaggcaaagaagcacagaaggtctaagaagaagaagaagggaagtgagaagtgggtcgcttatgttgtccgcgccatcaacttgtccgatttgttgttatcatcagaagacgatgatggtttgcaattacggcaggtgggctataaggccggggatgaactcccgggttctgtgggttgcagtgggtggggatctcggattgttttcgccgccggcatgaaaccctgcggccgtatgccttcatttgatcgtcccgacatagtttggcatagagatgtttacgcctttgagactgaccccaacaagcacaagcagccccgtgataatactcataatagtagaattaccaagatgggtggcacattagttgaagccaagtttcgtcctctgatggaggaggtggggggcaaactgtatgcactttcatataggctggtggctaatcctccctcatttgaggtattcgacccgaaagtggggagttgggcgcccctaccccagccttcattcttcaaacgtcatggtcagtataaccgcggtggcttcctctcttatgcagttactagcaccaagatgtttgtgtctcaggagagatgtcccgtcttctgtttcgatgtagctcacccagacagtgaatggagattagtctcttctatgtgccaacgcagcccttttccttttaaaaacaaggctttggtcctggacctgccggcgggtgctgatgacaagaagaagataatgtttgcctatagttttggtcgttgggtgaagccccaggcccaaggacagccaggccaagaacaggcccacaagaccaaggcccgaagtgcccaagccctgaccccagcccaagatagcccttgcacagggaggccggccaccaccatcagaccaccatgcccgccactccgttgcctttctcggaccccgacaatgggacaatgggagtctctcaagccccctctccaatcaccggaaacaccaaactccggtccggccgcactcgacgcacgccggcgaggccagaagccaacgccaacgacgacaggcagccggacaggcacagtcaacctcggcttttttctctcaattataattcaacgtttatgtgtgcattatgggatataa

Protein Analysis

408

Amino Acids

45.59

Weight (kDa)

9.93

Isoelectric Point (pI)

59.1

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1193
AarI CACCTGC 1 cut(s) 223
Acc36I ACCTGC 2 cut(s) 223, 813
AccB1I GGYRCC 1 cut(s) 586
AccII CGCG 2 cut(s) 171, 636
AciI CCGC 8 cut(s) 169, 309, 327, 634, 636, 812, 1001, 1098
AclI AACGTT 1 cut(s) 1201
AclWI GGATC 1 cut(s) 298
AcoI YGGCCR 3 cut(s) 328, 975, 1095
AcyI GRCGYC 2 cut(s) 61, 587
AfiI CCNNNNNNNGG 9 cut(s) 574, 575, 811, 901, 965, 1033, 1034, 1072, 1088
AgsI TTSAA 3 cut(s) 470, 613, 1199
AjnI CCWGG 3 cut(s) 798, 873, 889
AluBI AGCT 1 cut(s) 719
AluI AGCT 1 cut(s) 719
Alw26I GTCTC 5 cut(s) 23, 383, 687, 751, 1053
AlwI GGATC 1 cut(s) 298
Ama87I CYCGRG 1 cut(s) 262
ApeKI GCWGC 4 cut(s) 78, 412, 765, 1149
AspLEI GCGC 2 cut(s) 173, 589
AspS9I GGNCC 7 cut(s) 796, 802, 877, 904, 919, 1023, 1091
AsuC2I CCSGG 3 cut(s) 250, 263, 264
AsuHPI GGTGA 3 cut(s) 713, 877, 1062
AvaI CYCGRG 1 cut(s) 262
AvaII GGWCC 4 cut(s) 796, 802, 1023, 1091
BaeGI GKGCMC 1 cut(s) 931
BanI GGYRCC 1 cut(s) 586
BbsI GAAGAC 3 cut(s) 57, 213, 694
BbvI GCAGC 4 cut(s) 65, 424, 777, 1161
BccI CCATC 5 cut(s) 182, 209, 445, 484, 992
BceAI ACGGC 4 cut(s) 61, 74, 245, 315
BciT130I CCWGG 3 cut(s) 800, 875, 891
BcnI CCSGG 3 cut(s) 250, 263, 264
BcoDI GTCTC 5 cut(s) 23, 383, 687, 751, 1053
BfaI CTAG 2 cut(s) 26, 663
BfmI CTRYAG 1 cut(s) 847
BfoI RGCGCY 1 cut(s) 590
BfuAI ACCTGC 2 cut(s) 223, 813
BglI GCCNNNNNGGC 2 cut(s) 1119, 1158
BisI GCNGC 7 cut(s) 79, 309, 328, 413, 766, 1098, 1150
BlsI GCNGC 7 cut(s) 80, 310, 329, 414, 767, 1099, 1151
Bme1390I CCNGG 6 cut(s) 250, 263, 264, 800, 875, 891
Bme18I GGWCC 4 cut(s) 796, 802, 1023, 1091
BmeT110I CYCGRG 1 cut(s) 262
BmgT120I GGNCC 7 cut(s) 796, 802, 877, 904, 919, 1023, 1091
BmiI GGNNCC 2 cut(s) 588, 1025
BmrFI CCNGG 6 cut(s) 250, 263, 264, 800, 875, 891
BmsI GCATC 1 cut(s) 103
BpiI GAAGAC 3 cut(s) 57, 213, 694
BpuEI CTTGAG 1 cut(s) 1037
BpuMI CCSGG 3 cut(s) 250, 263, 264
BsaHI GRCGYC 2 cut(s) 61, 587
BsaJI CCNNGG 7 cut(s) 249, 262, 634, 873, 880, 915, 1171
BsaWI WCCGGW 2 cut(s) 1072, 1088
Bsc4I CCNNNNNNNGG 9 cut(s) 574, 575, 811, 901, 965, 1033, 1034, 1072, 1088
Bse118I RCCGGY 4 cut(s) 311, 808, 973, 1113
Bse1I ACTGG 1 cut(s) 15
BseBI CCWGG 3 cut(s) 800, 875, 891
BseDI CCNNGG 7 cut(s) 249, 262, 634, 873, 880, 915, 1171
BseGI GGATG 1 cut(s) 259
BseLI CCNNNNNNNGG 9 cut(s) 574, 575, 811, 901, 965, 1033, 1034, 1072, 1088
BseMII CTCAG 1 cut(s) 698
BseNI ACTGG 1 cut(s) 15
BseRI GAGGAG 1 cut(s) 509
BseSI GKGCMC 1 cut(s) 931
BseX3I CGGCCG 2 cut(s) 328, 1095
BseXI GCAGC 4 cut(s) 65, 424, 777, 1161
BseYI CCCAGC 2 cut(s) 597, 943
Bsh1236I CGCG 2 cut(s) 171, 636
Bsh1285I CGRYCG 2 cut(s) 331, 1098
BshNI GGYRCC 1 cut(s) 586
BsiEI CGRYCG 2 cut(s) 331, 1098
BsiHKCI CYCGRG 1 cut(s) 262
BslFI GGGAC 3 cut(s) 336, 681, 1050
BslI CCNNNNNNNGG 9 cut(s) 574, 575, 811, 901, 965, 1033, 1034, 1072, 1088
BsmAI GTCTC 5 cut(s) 23, 383, 687, 751, 1053
BsmFI GGGAC 3 cut(s) 336, 681, 1050
BsoBI CYCGRG 1 cut(s) 262
Bsp1286I GDGCHC 1 cut(s) 931
Bsp143I GATC 2 cut(s) 290, 346
BspACI CCGC 8 cut(s) 169, 309, 327, 634, 636, 812, 1001, 1098
BspCNI CTCAG 1 cut(s) 697
BspFNI CGCG 2 cut(s) 171, 636
BspLI GGNNCC 2 cut(s) 588, 1025
BspMI ACCTGC 2 cut(s) 223, 813
BspPI GGATC 1 cut(s) 298
BspT107I GGYRCC 1 cut(s) 586
BsrFI RCCGGY 4 cut(s) 311, 808, 973, 1113
BsrI ACTGG 1 cut(s) 15
BssAI RCCGGY 4 cut(s) 311, 808, 973, 1113
BssECI CCNNGG 7 cut(s) 249, 262, 634, 873, 880, 915, 1171
BssMI GATC 2 cut(s) 290, 346
BssNI GRCGYC 2 cut(s) 61, 587
BssT1I CCWWGG 2 cut(s) 880, 915
Bst2UI CCWGG 3 cut(s) 800, 875, 891
Bst4CI ACNGT 3 cut(s) 513, 731, 1165
Bst6I CTCTTC 1 cut(s) 754
BstACI GRCGYC 2 cut(s) 61, 587
BstC8I GCNNGC 7 cut(s) 40, 313, 810, 975, 1001, 1111, 1115
BstDEI CTNAG 2 cut(s) 123, 684
BstDSI CCRYGG 1 cut(s) 634
BstENI CCTNNNNNAGG 1 cut(s) 963
BstF5I GGATG 1 cut(s) 259
BstFNI CGCG 2 cut(s) 171, 636
BstH2I RGCGCY 1 cut(s) 590
BstHHI GCGC 2 cut(s) 173, 589
BstKTI GATC 2 cut(s) 293, 349
BstMAI GTCTC 5 cut(s) 23, 383, 687, 751, 1053
BstMBI GATC 2 cut(s) 290, 346
BstMCI CGRYCG 2 cut(s) 331, 1098
BstMWI GCNNNNNNNGC 9 cut(s) 35, 67, 229, 412, 765, 926, 1106, 1119, 1158
BstNI CCWGG 3 cut(s) 800, 875, 891
BstSCI CCNGG 6 cut(s) 248, 261, 262, 798, 873, 889
BstSFI CTRYAG 1 cut(s) 847
BstSLI GKGCMC 1 cut(s) 931
BstUI CGCG 2 cut(s) 171, 636
BstV1I GCAGC 4 cut(s) 65, 424, 777, 1161
BstV2I GAAGAC 3 cut(s) 57, 213, 694
BstX2I RGATCY 1 cut(s) 290
BstYI RGATCY 1 cut(s) 290
BstZI CGGCCG 2 cut(s) 328, 1095
BtgI CCRYGG 1 cut(s) 634
BtsCI GGATG 1 cut(s) 259
BtsI GCAGTG 2 cut(s) 89, 286
BtsIMutI CAGTG 3 cut(s) 89, 286, 736
BveI ACCTGC 2 cut(s) 223, 813
Cac8I GCNNGC 7 cut(s) 40, 313, 810, 975, 1001, 1111, 1115
CfoI GCGC 2 cut(s) 173, 589
Cfr10I RCCGGY 4 cut(s) 311, 808, 973, 1113
Cfr13I GGNCC 7 cut(s) 796, 802, 877, 904, 919, 1023, 1091
Cfr42I CCGCGG 1 cut(s) 637
Cfr9I CCCGGG 1 cut(s) 262
CpoI CGGWCCG 1 cut(s) 1091
CseI GACGC 3 cut(s) 50, 84, 1115
CspCI CAANNNNNGTGG 2 cut(s) 436, 471
CspI CGGWCCG 1 cut(s) 1091
CviAII CATG 3 cut(s) 316, 620, 996
DdeI CTNAG 2 cut(s) 123, 684
DinI GGCGCC 1 cut(s) 588
DpnI GATC 2 cut(s) 292, 348
DpnII GATC 2 cut(s) 290, 346
DraI TTTAAA 1 cut(s) 781
EaeI YGGCCR 3 cut(s) 328, 975, 1095
EagI CGGCCG 2 cut(s) 328, 1095
Eam1104I CTCTTC 1 cut(s) 754
EarI CTCTTC 1 cut(s) 754
EclXI CGGCCG 2 cut(s) 328, 1095
Eco130I CCWWGG 2 cut(s) 880, 915
Eco47I GGWCC 4 cut(s) 796, 802, 1023, 1091
Eco52I CGGCCG 2 cut(s) 328, 1095
Eco88I CYCGRG 1 cut(s) 262
EcoNI CCTNNNNNAGG 1 cut(s) 963
EcoRII CCWGG 3 cut(s) 798, 873, 889
EcoT14I CCWWGG 2 cut(s) 880, 915
EgeI GGCGCC 1 cut(s) 588
EheI GGCGCC 1 cut(s) 588
ErhI CCWWGG 2 cut(s) 880, 915
FaeI CATG 3 cut(s) 319, 623, 999
FaqI GGGAC 3 cut(s) 336, 681, 1050
FatI CATG 3 cut(s) 315, 619, 995
FauI CCCGC 2 cut(s) 805, 1008
Fnu4HI GCNGC 7 cut(s) 79, 309, 328, 413, 766, 1098, 1150
FokI GGATG 1 cut(s) 266
FseI GGCCGGCC 1 cut(s) 977
Fsp4HI GCNGC 7 cut(s) 79, 309, 328, 413, 766, 1098, 1150
FspBI CTAG 2 cut(s) 26, 663
GlaI GCGC 2 cut(s) 172, 588
GluI GCNGC 7 cut(s) 79, 309, 328, 413, 766, 1098, 1150
GsaI CCCAGC 2 cut(s) 601, 947
HaeII RGCGCY 1 cut(s) 590
HgaI GACGC 3 cut(s) 50, 84, 1115
HhaI GCGC 2 cut(s) 173, 589
Hin1I GRCGYC 2 cut(s) 61, 587
Hin1II CATG 3 cut(s) 319, 623, 999
Hin6I GCGC 2 cut(s) 171, 587
HinP1I GCGC 2 cut(s) 171, 587
HincII GTYRAC 1 cut(s) 1168
HindII GTYRAC 1 cut(s) 1168
HinfI GANTC 1 cut(s) 1046
HphI GGTGA 3 cut(s) 713, 877, 1062
Hpy166II GTNNAC 3 cut(s) 86, 379, 1168
Hpy188I TCNGA 6 cut(s) 187, 205, 297, 489, 989, 1023
Hpy188III TCNNGA 2 cut(s) 353, 686
Hpy8I GTNNAC 3 cut(s) 86, 379, 1168
Hpy99I CGWCG 3 cut(s) 78, 1109, 1144
HpyAV CCTTC 4 cut(s) 111, 130, 348, 612
HpyCH4III ACNGT 3 cut(s) 513, 731, 1165
HpyCH4IV ACGT 2 cut(s) 616, 1201
HpyCH4V TGCA 7 cut(s) 94, 223, 279, 518, 656, 963, 1213
HpyF10VI GCNNNNNNNGC 9 cut(s) 35, 67, 229, 412, 765, 926, 1106, 1119, 1158
HpyF3I CTNAG 2 cut(s) 123, 684
HpySE526I ACGT 2 cut(s) 616, 1201
Hsp92I GRCGYC 2 cut(s) 61, 587
Hsp92II CATG 3 cut(s) 319, 623, 999
HspAI GCGC 2 cut(s) 171, 587
KasI GGCGCC 1 cut(s) 586
KroI GCCGGC 4 cut(s) 311, 808, 973, 1113
KroNI GCCGGC 4 cut(s) 313, 810, 975, 1115
KspI CCGCGG 1 cut(s) 637
Kzo9I GATC 2 cut(s) 290, 346
Lsp1109I GCAGC 4 cut(s) 65, 424, 777, 1161
LweI GCATC 1 cut(s) 103
MaeI CTAG 2 cut(s) 26, 663
MaeII ACGT 2 cut(s) 616, 1201
MaeIII GTNAC 1 cut(s) 658
MalI GATC 2 cut(s) 292, 348
MboI GATC 2 cut(s) 290, 346
MflI RGATCY 1 cut(s) 290
MhlI GDGCHC 1 cut(s) 931
MluCI AATT 4 cut(s) 224, 441, 1188, 1194
Mly113I GGCGCC 1 cut(s) 587
MlyI GAGTC 1 cut(s) 1055
MreI CGCCGGCG 1 cut(s) 1113
MroNI GCCGGC 4 cut(s) 311, 808, 973, 1113
MseI TTAA 1 cut(s) 780
MslI CAYNNNNRTG 2 cut(s) 372, 671
MspA1I CMGCKG 1 cut(s) 636
MspR9I CCNGG 6 cut(s) 250, 263, 264, 800, 875, 891
MvaI CCWGG 3 cut(s) 800, 875, 891
MvnI CGCG 2 cut(s) 171, 636
MwoI GCNNNNNNNGC 9 cut(s) 35, 67, 229, 412, 765, 926, 1106, 1119, 1158
NaeI GCCGGC 4 cut(s) 313, 810, 975, 1115
NarI GGCGCC 1 cut(s) 587
NciI CCSGG 3 cut(s) 250, 263, 264
NdeII GATC 2 cut(s) 290, 346
NgoMIV GCCGGC 4 cut(s) 311, 808, 973, 1113
NlaIII CATG 3 cut(s) 319, 623, 999
NlaIV GGNNCC 2 cut(s) 588, 1025
NmeAIII GCCGAG 1 cut(s) 1152
PaqCI CACCTGC 1 cut(s) 223
PcsI WCGNNNNNNNCGW 2 cut(s) 51, 1139
PdiI GCCGGC 4 cut(s) 313, 810, 975, 1115
PfoI TCCNGGA 1 cut(s) 798
PkrI GCNGC 7 cut(s) 80, 310, 329, 414, 767, 1099, 1151
PleI GAGTC 1 cut(s) 1054
PluTI GGCGCC 1 cut(s) 590
PpsI GAGTC 1 cut(s) 1054
PsiI TTATAA 1 cut(s) 1193
Psp1406I AACGTT 1 cut(s) 1201
Psp6I CCWGG 3 cut(s) 798, 873, 889
PspFI CCCAGC 2 cut(s) 597, 943
PspGI CCWGG 3 cut(s) 798, 873, 889
PspN4I GGNNCC 2 cut(s) 588, 1025
PspPI GGNCC 7 cut(s) 796, 802, 877, 904, 919, 1023, 1091
PsuI RGATCY 1 cut(s) 290
RigI GGCCGGCC 1 cut(s) 977
RseI CAYNNNNRTG 2 cut(s) 372, 671
Rsr2I CGGWCCG 1 cut(s) 1091
RsrII CGGWCCG 1 cut(s) 1091
SacII CCGCGG 1 cut(s) 637
SaqAI TTAA 1 cut(s) 780
SatI GCNGC 7 cut(s) 79, 309, 328, 413, 766, 1098, 1150
Sau3AI GATC 2 cut(s) 290, 346
Sau96I GGNCC 7 cut(s) 796, 802, 877, 904, 919, 1023, 1091
SchI GAGTC 1 cut(s) 1055
ScrFI CCNGG 6 cut(s) 250, 263, 264, 800, 875, 891
SduI GDGCHC 1 cut(s) 931
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 847
SfoI GGCGCC 1 cut(s) 588
Sfr303I CCGCGG 1 cut(s) 637
SgrAI CRCCGGYG 1 cut(s) 1113
SgrBI CCGCGG 1 cut(s) 637
SinI GGWCC 4 cut(s) 796, 802, 1023, 1091
SmaI CCCGGG 1 cut(s) 264
SmiMI CAYNNNNRTG 2 cut(s) 372, 671
SmlI CTYRAG 1 cut(s) 1052
SmoI CTYRAG 1 cut(s) 1052
Sse9I AATT 4 cut(s) 224, 441, 1188, 1194
SsiI CCGC 8 cut(s) 169, 309, 327, 634, 636, 812, 1001, 1098
SspDI GGCGCC 1 cut(s) 586
SspMI CTAG 2 cut(s) 26, 663
StyD4I CCNGG 6 cut(s) 248, 261, 262, 798, 873, 889
StyI CCWWGG 2 cut(s) 880, 915
TaaI ACNGT 3 cut(s) 513, 731, 1165
TaiI ACGT 2 cut(s) 619, 1204
TaqI TCGA 4 cut(s) 73, 564, 711, 1104
TasI AATT 4 cut(s) 224, 441, 1188, 1194
TauI GCSGC 3 cut(s) 311, 330, 1100
Tru1I TTAA 1 cut(s) 780
Tru9I TTAA 1 cut(s) 780
TscAI CASTG 3 cut(s) 96, 286, 736
TseI GCWGC 4 cut(s) 78, 412, 765, 1149
TspDTI ATGAA 5 cut(s) 270, 330, 332, 513, 594
TspGWI ACGGA 1 cut(s) 998
TspMI CCCGGG 1 cut(s) 262
TspRI CASTG 3 cut(s) 96, 286, 736
VpaK11BI GGWCC 4 cut(s) 796, 802, 1023, 1091
XagI CCTNNNNNAGG 1 cut(s) 963
XcmI CCANNNNNNNNNTGG 1 cut(s) 732
XmaI CCCGGG 1 cut(s) 262
XspI CTAG 2 cut(s) 26, 663
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.