Rorug01G0091100

Type I inositol 1,4,5-trisphosphate 5-phosphatase

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
Physical Location & Seq
Forward (+)
14821325 .. 14828105
6781 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0091100.1

Sequence Viewer

Length: 2154 bp
ATGGCGTGGAGACAGCTTACCAAAAAGGGCATACGTGCCAGTCTAAATACTGATTTGACGTCAAGACTACGAAGATATGCAGTGGGATTTACTTCTTTATCTAACGTTGATGATGTAGTAAAATCAGTTTCGTGTACACCAGAGCCCTCATTTAAAGTTAAGTCACGAAAGCTTGTGTGTGGTGAAATATTGATAAAAGACATCCAAATACGATGCTATCATGGGAGAAATGGGAATGACCAGTCATTTGGTTTAAAACCTCCCAAGAGAGAGAAGTTTGTAAAGAGGGACAATAAGGCACAGCCTCCTGTTGATGCTCCATATGTGCCTCCTAAACCACAAAGAACTACCAAGGCCATGCCAGATAAGACAATTGAGATTTTTGAAGGTATGACAATTGATGAACTTGCCAAGCGCACTGGACAGTCAATATCTACCCTGCAAACCATTCTTACAAATGTTGGGGAAAAGGTTGGCTCGGAGTTTGATACTCTCAGCGTCGACATTGCAGAGCTGGTTGCAATGGAAGTTGGGGTCAATGTGAGGAGGCTGCACTCCAATGAAGGTACAGAAATTCTACCACGACCTCCAGTTGTAACTGTCATGGGCCATGTTGACCATGGGAAAACTTCACTTTTGGATGCTCTACGTCAGACATCTGTGGCTGCCAAAGAAGCCGGAGGAATTACTCAGCATGTTGGTGCTTTTGTTGTTGGCATGACATCTGGAGCGTCAATTACATTTCTTGACACCCCTGGTCATGCAGCATTTAGTGCGATGCGAGCTAGAGGGGCTGCCGTTACAGATATAGTTGTGCTTGTTGTAGCTGCTGATGATGGGGTGATGCCTCAGACTCTTGAAGCCATGGCCCATGCAAAGGCAGCTAAAGTACCAATTGTTGTTGCAATTAATAAATGTGATAAACCAGCTGCTAACGCAGAAAAAGTAAGACTCCAGCTTGCGTCGGAGGGCTTGCTGCTAGAGGATATGGGTGGGGATGTTCAAGTTGTTGAGGTTTCAGCTATGAAGAAGACTGGATTAGATAACTTGGAGGAGGCATTGCTTCTCCAGGCTGAGATGATGGATCTGAAAGCTCGTATTGATGGACCGGCCCAAGCTTATGTGGTGGAAGCAAGACTTGATAGGGGAAAGGGTCCATTGGTTACTGCAATAGTGAAAGCAGGAACTTTAATTTGTGGGAAATATGTGGTCGTGGGCTCCGAGTGGGGTAGAATAAGGGCTATTCGGGACATGGCAGGGAAGTCGACAGAGCGGGCAACACCTGCGATGCCAGTTGAGATTGAAGGCCTGAAGGGACTTCCAAGGGCTGGAGATGATATCATTGTTGTGGAATCTGAGGAGCGAGCTAGAATGCTTAGTGCAGGGAGGAAGAGGAAGTTCGAGAAAGATAGACTTATGAAAATTATGGATGGAAGGGTAGAAGATTCAGAAACAGAACCATCAGATGAGGCGCCTAAGCGGGTTGAATTGCCAATAATAGTAAAAGGGGATGTGCAGGGTACTGTCCAAGCTGTTACAGATGCATTAGGGAGTTTAAATAGTCCTCAGGTTTTTGTGAATGTGGTACATGTTGGTGTTGGGTCGCTATCTCAGTCTGATGTGGACATGGCACAAGCCTGTGGTGCATGTATTATTGGATTTAACATCAAGGCTCCACCCAGTTCCATCAGTTTGGCTGCGTCTAGAGCCAATATCAAGATAATGCAACACCGTGTGATCTATCATCTTCTGGAGGACATTGGGAACTTTATAGTTAGGAAGGCCCCTGGGACTACCGAGACCAAGGTAGCTGGGGAAGCCGAGGTTCTTAGTATTTTTGAGCTCAAAGGAAGGAGCAAGTCTAAGGGACCTGATGTGAAGATTGCCGGATGCCGGGTGGTTGATGGTTTTGTCACTAAATCGGCAACCCTAAGGCTTCTTAGGAGTGGAGAAGTTATATTTGAGGGATCATGTGAATCGCTTAAGCGGGAGAAACAGGATGTGGACACGGTAAAGAAGGGGAATGAGTGTGGACTGGTGATCCAAAATTGCTATGATTTCCAGGTTGGTGACATGGTCCAGTGCTTGCAGCAAGTTATAAGGAAGCCCAAATTCATTTCATCGGAGAGTGGTGCTGTTCGAATAGAGTGTTGA

Protein Analysis

717

Amino Acids

77.36

Weight (kDa)

8.69

Isoelectric Point (pI)

36.96

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GTP_EFTU PF00009 199 - 355 3.7e-33 Elongation factor Tu GTP binding domain
MMR_HSR1 PF01926 199 - 305 1.5e-09 50S ribosome-binding GTPase
FeoB_N PF02421 199 - 353 4.7e-06 Ferrous iron transport protein B
EF-G_D2 PF22042 370 - 449 3.9e-19 Elongation factor G domain 2
IF-2 PF11987 493 - 587 2.8e-28 Translation-initiation factor 2
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 2099
AarI CACCTGC 1 cut(s) 1291
AatII GACGTC 1 cut(s) 62
Acc36I ACCTGC 1 cut(s) 1291
AccB1I GGYRCC 1 cut(s) 1471
AccB7I CCANNNNNTGG 1 cut(s) 1328
AccBSI CCGCTC 1 cut(s) 1273
AccI GTMKAC 2 cut(s) 501, 1265
AciI CCGC 3 cut(s) 1273, 1480, 1987
AclI AACGTT 1 cut(s) 105
AclWI GGATC 3 cut(s) 1092, 1975, 2035
AcsI RAATTY 2 cut(s) 573, 2111
AcuI CTGAAG 1 cut(s) 1331
AcyI GRCGYC 2 cut(s) 59, 1472
AdeI CACNNNGTG 1 cut(s) 1735
AfaI GTAC 5 cut(s) 136, 568, 891, 1522, 1587
AfiI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
AflII CTTAAG 1 cut(s) 1982
AflIII ACRYGT 1 cut(s) 1588
AgsI TTSAA 5 cut(s) 386, 860, 1004, 1304, 1487
AjnI CCWGG 4 cut(s) 754, 1068, 1786, 2061
Alw21I GWGCWC 1 cut(s) 1845
Alw26I GTCTC 2 cut(s) 4, 1793
AlwI GGATC 3 cut(s) 1092, 1975, 2035
AoxI GGCC 6 cut(s) 354, 607, 867, 1110, 1306, 1782
ApoI RAATTY 2 cut(s) 573, 2111
ArsI GACNNNNNNTTYG 2 cut(s) 230, 262
AseI ATTAAT 1 cut(s) 909
AspLEI GCGC 2 cut(s) 417, 1474
AspS9I GGNCC 8 cut(s) 607, 868, 1106, 1111, 1154, 1783, 1868, 2077
AsuC2I CCSGG 1 cut(s) 1895
AsuHPI GGTGA 4 cut(s) 194, 853, 2050, 2081
AsuII TTCGAA 1 cut(s) 2140
AvaII GGWCC 4 cut(s) 1106, 1154, 1868, 2077
AxyI CCTNAGG 2 cut(s) 1566, 1931
BanI GGYRCC 1 cut(s) 1471
BanII GRGCYC 3 cut(s) 147, 1220, 1845
BbsI GAAGAC 1 cut(s) 1037
Bbv12I GWGCWC 1 cut(s) 1845
BccI CCATC 7 cut(s) 830, 1075, 1097, 1424, 1468, 1694, 1898
BceAI ACGGC 1 cut(s) 782
BcgI CGANNNNNNTGC 2 cut(s) 1245, 1279
BciT130I CCWGG 4 cut(s) 756, 1070, 1788, 2063
BcnI CCSGG 1 cut(s) 1895
BcoDI GTCTC 2 cut(s) 4, 1793
BfaI CTAG 4 cut(s) 786, 980, 1368, 1704
BfoI RGCGCY 1 cut(s) 1475
BfrI CTTAAG 1 cut(s) 1982
BfuAI ACCTGC 1 cut(s) 1291
Bme1390I CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
Bme18I GGWCC 4 cut(s) 1106, 1154, 1868, 2077
BmgT120I GGNCC 8 cut(s) 607, 868, 1106, 1111, 1154, 1783, 1868, 2077
BmiI GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
BmrFI CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
BmrI ACTGGG 1 cut(s) 1674
BmsI GCATC 8 cut(s) 203, 304, 631, 768, 834, 1278, 1531, 1880
BmuI ACTGGG 1 cut(s) 1674
BpiI GAAGAC 1 cut(s) 1037
BpmI CTGGAG 6 cut(s) 573, 747, 938, 1052, 1350, 1772
Bpu10I CCTNAGC 1 cut(s) 1476
Bpu14I TTCGAA 1 cut(s) 2140
BpuMI CCSGG 1 cut(s) 1895
BsaAI YACGTR 1 cut(s) 35
BsaHI GRCGYC 2 cut(s) 59, 1472
BsaI GGTCTC 1 cut(s) 1793
BsaJI CCNNGG 9 cut(s) 351, 619, 754, 864, 1322, 1786, 1787, 1803, 1821
Bsc4I CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
Bse118I RCCGGY 1 cut(s) 1108
Bse1I ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
Bse21I CCTNAGG 2 cut(s) 1566, 1931
Bse3DI GCAATG 3 cut(s) 504, 528, 1058
BseBI CCWGG 4 cut(s) 756, 1070, 1788, 2063
BseDI CCNNGG 9 cut(s) 351, 619, 754, 864, 1322, 1786, 1787, 1803, 1821
BseGI GGATG 7 cut(s) 201, 646, 1003, 1435, 1516, 1895, 2005
BseLI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
BseMI GCAATG 3 cut(s) 504, 528, 1058
BseMII CTCAG 7 cut(s) 508, 704, 863, 1065, 1347, 1580, 1625
BseNI ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
BseRI GAGGAG 3 cut(s) 559, 1067, 1373
BseYI CCCAGC 1 cut(s) 1811
BsgI GTGCAG 3 cut(s) 536, 1401, 1535
BshFI GGCC 6 cut(s) 356, 609, 869, 1112, 1308, 1784
BshNI GGYRCC 1 cut(s) 1471
BsiHKAI GWGCWC 1 cut(s) 1845
BsiSI CCGG 4 cut(s) 678, 1109, 1887, 1894
BslFI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
BslI CCNNNNNNNGG 3 cut(s) 877, 1328, 1893
BsmAI GTCTC 2 cut(s) 4, 1793
BsmFI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
BsmI GAATGC 1 cut(s) 1377
BsnI GGCC 6 cut(s) 356, 609, 869, 1112, 1308, 1784
Bso31I GGTCTC 1 cut(s) 1793
Bsp119I TTCGAA 1 cut(s) 2140
Bsp1286I GDGCHC 3 cut(s) 147, 1220, 1845
Bsp1407I TGTACA 1 cut(s) 134
Bsp143I GATC 4 cut(s) 1084, 1737, 1967, 2040
Bsp19I CCATGG 2 cut(s) 619, 864
BspACI CCGC 3 cut(s) 1273, 1480, 1987
BspANI GGCC 6 cut(s) 356, 609, 869, 1112, 1308, 1784
BspCNI CTCAG 7 cut(s) 507, 703, 862, 1066, 1348, 1579, 1624
BspLI GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
BspMI ACCTGC 1 cut(s) 1291
BspPI GGATC 3 cut(s) 1092, 1975, 2035
BspT104I TTCGAA 1 cut(s) 2140
BspT107I GGYRCC 1 cut(s) 1471
BspTI CTTAAG 1 cut(s) 1982
BspTNI GGTCTC 1 cut(s) 1793
BsrBI CCGCTC 1 cut(s) 1273
BsrDI GCAATG 3 cut(s) 504, 528, 1058
BsrFI RCCGGY 1 cut(s) 1108
BsrGI TGTACA 1 cut(s) 134
BsrI ACTGG 9 cut(s) 39, 241, 424, 590, 1039, 1292, 1680, 2040, 2080
BssAI RCCGGY 1 cut(s) 1108
BssECI CCNNGG 9 cut(s) 351, 619, 754, 864, 1322, 1786, 1787, 1803, 1821
BssMI GATC 4 cut(s) 1084, 1737, 1967, 2040
BssNI GRCGYC 2 cut(s) 59, 1472
BssT1I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
Bst2UI CCWGG 4 cut(s) 756, 1070, 1788, 2063
Bst4CI ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
Bst6I CTCTTC 1 cut(s) 1385
BstACI GRCGYC 2 cut(s) 59, 1472
BstAFI CTTAAG 1 cut(s) 1982
BstAPI GCANNNNNTGC 2 cut(s) 773, 1283
BstAUI TGTACA 1 cut(s) 134
BstBAI YACGTR 1 cut(s) 35
BstBI TTCGAA 1 cut(s) 2140
BstC8I GCNNGC 6 cut(s) 783, 960, 974, 1275, 1365, 2087
BstDSI CCRYGG 2 cut(s) 619, 864
BstF5I GGATG 7 cut(s) 201, 646, 1003, 1435, 1516, 1895, 2005
BstH2I RGCGCY 1 cut(s) 1475
BstHHI GCGC 2 cut(s) 417, 1474
BstKTI GATC 4 cut(s) 1087, 1740, 1970, 2043
BstMAI GTCTC 2 cut(s) 4, 1793
BstMBI GATC 4 cut(s) 1084, 1737, 1967, 2040
BstNI CCWGG 4 cut(s) 756, 1070, 1788, 2063
BstNSI RCATGY 3 cut(s) 698, 1592, 1650
BstSCI CCNGG 5 cut(s) 754, 1068, 1786, 1893, 2061
BstV2I GAAGAC 1 cut(s) 1037
BstX2I RGATCY 1 cut(s) 1084
BstXI CCANNNNNNTGG 2 cut(s) 248, 1693
BstYI RGATCY 1 cut(s) 1084
Bsu36I CCTNAGG 2 cut(s) 1566, 1931
BsuRI GGCC 6 cut(s) 356, 609, 869, 1112, 1308, 1784
BtgI CCRYGG 2 cut(s) 619, 864
BtgZI GCGATG 2 cut(s) 791, 1301
BtsCI GGATG 7 cut(s) 201, 646, 1003, 1435, 1516, 1895, 2005
BtsI GCAGTG 1 cut(s) 87
BtsIMutI CAGTG 3 cut(s) 87, 417, 2087
BveI ACCTGC 1 cut(s) 1291
Cac8I GCNNGC 6 cut(s) 783, 960, 974, 1275, 1365, 2087
CfoI GCGC 2 cut(s) 417, 1474
Cfr10I RCCGGY 1 cut(s) 1108
Cfr13I GGNCC 8 cut(s) 607, 868, 1106, 1111, 1154, 1783, 1868, 2077
CseI GACGC 4 cut(s) 487, 720, 951, 1689
Csp6I GTAC 5 cut(s) 135, 567, 890, 1521, 1586
CviQI GTAC 5 cut(s) 135, 567, 890, 1521, 1586
DinI GGCGCC 1 cut(s) 1473
DpnI GATC 4 cut(s) 1086, 1739, 1969, 2042
DpnII GATC 4 cut(s) 1084, 1737, 1967, 2040
DraI TTTAAA 3 cut(s) 154, 255, 1557
DraIII CACNNNGTG 1 cut(s) 1735
Eam1104I CTCTTC 1 cut(s) 1385
EarI CTCTTC 1 cut(s) 1385
Ecl136II GAGCTC 1 cut(s) 1843
Eco130I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
Eco147I AGGCCT 1 cut(s) 1308
Eco24I GRGCYC 3 cut(s) 147, 1220, 1845
Eco31I GGTCTC 1 cut(s) 1793
Eco32I GATATC 1 cut(s) 1339
Eco47I GGWCC 4 cut(s) 1106, 1154, 1868, 2077
Eco53kI GAGCTC 1 cut(s) 1843
Eco57I CTGAAG 1 cut(s) 1331
Eco81I CCTNAGG 2 cut(s) 1566, 1931
EcoICRI GAGCTC 1 cut(s) 1843
EcoO109I RGGNCCY 2 cut(s) 1783, 1868
EcoRII CCWGG 4 cut(s) 754, 1068, 1786, 2061
EcoRV GATATC 1 cut(s) 1339
EcoT14I CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
EcoT22I ATGCAT 1 cut(s) 1546
EcoT38I GRGCYC 3 cut(s) 147, 1220, 1845
EgeI GGCGCC 1 cut(s) 1473
EheI GGCGCC 1 cut(s) 1473
ErhI CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
FalI AAGNNNNNCTT 4 cut(s) 1122, 1154, 1398, 1430
FaqI GGGAC 5 cut(s) 302, 1262, 1329, 1804, 1881
FauI CCCGC 3 cut(s) 1266, 1473, 1980
FauNDI CATATG 1 cut(s) 322
FblI GTMKAC 2 cut(s) 501, 1265
FokI GGATG 7 cut(s) 188, 653, 1010, 1442, 1523, 1902, 2012
FriOI GRGCYC 3 cut(s) 147, 1220, 1845
FspBI CTAG 4 cut(s) 786, 980, 1368, 1704
GlaI GCGC 2 cut(s) 416, 1473
GsaI CCCAGC 1 cut(s) 1815
GsuI CTGGAG 6 cut(s) 573, 747, 938, 1052, 1350, 1772
HaeII RGCGCY 1 cut(s) 1475
HaeIII GGCC 6 cut(s) 356, 609, 869, 1112, 1308, 1784
HapII CCGG 4 cut(s) 678, 1109, 1887, 1894
HgaI GACGC 4 cut(s) 487, 720, 951, 1689
HhaI GCGC 2 cut(s) 417, 1474
Hin1I GRCGYC 2 cut(s) 59, 1472
Hin6I GCGC 2 cut(s) 415, 1472
HinP1I GCGC 2 cut(s) 415, 1472
HincII GTYRAC 3 cut(s) 502, 616, 1266
HindII GTYRAC 3 cut(s) 502, 616, 1266
HindIII AAGCTT 2 cut(s) 170, 1116
HinfI GANTC 5 cut(s) 853, 951, 1352, 1445, 1976
HpaII CCGG 4 cut(s) 678, 1109, 1887, 1894
HphI GGTGA 4 cut(s) 194, 853, 2050, 2081
Hpy166II GTNNAC 8 cut(s) 135, 137, 502, 616, 1266, 1624, 2005, 2033
Hpy8I GTNNAC 8 cut(s) 135, 137, 502, 616, 1266, 1624, 2005, 2033
Hpy99I CGWCG 2 cut(s) 503, 967
HpyAV CCTTC 8 cut(s) 380, 557, 1298, 1306, 1428, 1774, 1845, 2011
HpyCH4III ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
HpyCH4IV ACGT 4 cut(s) 34, 59, 105, 649
HpySE526I ACGT 4 cut(s) 34, 59, 105, 649
Hsp92I GRCGYC 2 cut(s) 59, 1472
HspAI GCGC 2 cut(s) 415, 1472
KasI GGCGCC 1 cut(s) 1471
Kzo9I GATC 4 cut(s) 1084, 1737, 1967, 2040
LmnI GCTCC 6 cut(s) 322, 728, 1223, 1360, 1678, 1854
LweI GCATC 8 cut(s) 203, 304, 631, 768, 834, 1278, 1531, 1880
MaeI CTAG 4 cut(s) 786, 980, 1368, 1704
MaeII ACGT 4 cut(s) 34, 59, 105, 649
MaeIII GTNAC 7 cut(s) 162, 595, 799, 1162, 1534, 1912, 2069
MalI GATC 4 cut(s) 1086, 1739, 1969, 2042
MbiI CCGCTC 1 cut(s) 1273
MboI GATC 4 cut(s) 1084, 1737, 1967, 2040
MboII GAAGA 7 cut(s) 84, 1039, 1042, 1402, 1454, 1739, 1891
MfeI CAATTG 3 cut(s) 372, 396, 894
MflI RGATCY 1 cut(s) 1084
MhlI GDGCHC 3 cut(s) 147, 1220, 1845
Mly113I GGCGCC 1 cut(s) 1472
MlyI GAGTC 2 cut(s) 847, 945
MmeI TCCRAC 1 cut(s) 945
Mph1103I ATGCAT 1 cut(s) 1546
MseI TTAA 8 cut(s) 153, 159, 254, 909, 1190, 1556, 1662, 1983
MslI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
MspA1I CMGCKG 1 cut(s) 929
MspCI CTTAAG 1 cut(s) 1982
MspI CCGG 4 cut(s) 678, 1109, 1887, 1894
MspR9I CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
MunI CAATTG 3 cut(s) 372, 396, 894
Mva1269I GAATGC 1 cut(s) 1377
MvaI CCWGG 4 cut(s) 756, 1070, 1788, 2063
NarI GGCGCC 1 cut(s) 1472
NciI CCSGG 1 cut(s) 1895
NcoI CCATGG 2 cut(s) 619, 864
NdeI CATATG 1 cut(s) 322
NdeII GATC 4 cut(s) 1084, 1737, 1967, 2040
NlaIV GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
NmeAIII GCCGAG 1 cut(s) 1846
NmuCI GTSAC 3 cut(s) 162, 1912, 2069
NsiI ATGCAT 1 cut(s) 1546
NspI RCATGY 3 cut(s) 698, 1592, 1650
NspV TTCGAA 1 cut(s) 2140
PaqCI CACCTGC 1 cut(s) 1291
PasI CCCWGGG 1 cut(s) 1787
PceI AGGCCT 1 cut(s) 1308
PciI ACATGT 1 cut(s) 1588
PcsI WCGNNNNNNNCGW 1 cut(s) 1218
PctI GAATGC 1 cut(s) 1377
PfeI GAWTC 3 cut(s) 1352, 1445, 1976
PflFI GACNNNGTC 1 cut(s) 2075
PflMI CCANNNNNTGG 1 cut(s) 1328
PleI GAGTC 2 cut(s) 847, 945
PluTI GGCGCC 1 cut(s) 1475
PpsI GAGTC 2 cut(s) 847, 945
Ppu21I YACGTR 1 cut(s) 35
PpuMI RGGWCCY 1 cut(s) 1868
PscI ACATGT 1 cut(s) 1588
PshBI ATTAAT 1 cut(s) 909
PsiI TTATAA 1 cut(s) 2099
Psp124BI GAGCTC 1 cut(s) 1845
Psp1406I AACGTT 1 cut(s) 105
Psp5II RGGWCCY 1 cut(s) 1868
Psp6I CCWGG 4 cut(s) 754, 1068, 1786, 2061
PspFI CCCAGC 1 cut(s) 1811
PspGI CCWGG 4 cut(s) 754, 1068, 1786, 2061
PspN4I GGNNCC 6 cut(s) 1155, 1219, 1473, 1674, 1785, 1869
PspPI GGNCC 8 cut(s) 607, 868, 1106, 1111, 1154, 1783, 1868, 2077
PspPPI RGGWCCY 1 cut(s) 1868
PsuI RGATCY 1 cut(s) 1084
PsyI GACNNNGTC 1 cut(s) 2075
PvuII CAGCTG 1 cut(s) 929
RsaI GTAC 5 cut(s) 136, 568, 891, 1522, 1587
RsaNI GTAC 5 cut(s) 135, 567, 890, 1521, 1586
RseI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
SacI GAGCTC 1 cut(s) 1845
SalI GTCGAC 2 cut(s) 500, 1264
SaqAI TTAA 8 cut(s) 153, 159, 254, 909, 1190, 1556, 1662, 1983
Sau3AI GATC 4 cut(s) 1084, 1737, 1967, 2040
Sau96I GGNCC 8 cut(s) 607, 868, 1106, 1111, 1154, 1783, 1868, 2077
SchI GAGTC 2 cut(s) 847, 945
ScrFI CCNGG 5 cut(s) 756, 1070, 1788, 1895, 2063
SduI GDGCHC 3 cut(s) 147, 1220, 1845
SfaNI GCATC 8 cut(s) 203, 304, 631, 768, 834, 1278, 1531, 1880
SfoI GGCGCC 1 cut(s) 1473
SfuI TTCGAA 1 cut(s) 2140
SinI GGWCC 4 cut(s) 1106, 1154, 1868, 2077
SmiMI CAYNNNNRTG 4 cut(s) 558, 699, 1346, 1593
SmlI CTYRAG 1 cut(s) 1982
SmoI CTYRAG 1 cut(s) 1982
SseBI AGGCCT 1 cut(s) 1308
SsiI CCGC 3 cut(s) 1273, 1480, 1987
SspDI GGCGCC 1 cut(s) 1471
SspI AATATT 1 cut(s) 189
SspMI CTAG 4 cut(s) 786, 980, 1368, 1704
SstI GAGCTC 1 cut(s) 1845
StuI AGGCCT 1 cut(s) 1308
StyD4I CCNGG 5 cut(s) 754, 1068, 1786, 1893, 2061
StyI CCWWGG 5 cut(s) 351, 619, 864, 1322, 1803
TaaI ACNGT 5 cut(s) 426, 601, 1525, 1733, 2011
TaiI ACGT 4 cut(s) 37, 62, 108, 652
TaqI TCGA 4 cut(s) 501, 1265, 1401, 2140
TatI WGTACW 1 cut(s) 134
TfiI GAWTC 3 cut(s) 1352, 1445, 1976
Tru1I TTAA 8 cut(s) 153, 159, 254, 909, 1190, 1556, 1662, 1983
Tru9I TTAA 8 cut(s) 153, 159, 254, 909, 1190, 1556, 1662, 1983
TscAI CASTG 3 cut(s) 87, 424, 2087
TseFI GTSAC 3 cut(s) 162, 1912, 2069
Tsp45I GTSAC 3 cut(s) 162, 1912, 2069
TspDTI ATGAA 6 cut(s) 417, 576, 1040, 1433, 2104, 2109
TspRI CASTG 3 cut(s) 87, 424, 2087
Tth111I GACNNNGTC 1 cut(s) 2075
Van91I CCANNNNNTGG 1 cut(s) 1328
Vha464I CTTAAG 1 cut(s) 1982
VpaK11BI GGWCC 4 cut(s) 1106, 1154, 1868, 2077
VspI ATTAAT 1 cut(s) 909
XapI RAATTY 2 cut(s) 573, 2111
XbaI TCTAGA 1 cut(s) 1703
XceI RCATGY 3 cut(s) 698, 1592, 1650
XcmI CCANNNNNNNNNTGG 1 cut(s) 617
XmiI GTMKAC 2 cut(s) 501, 1265
XspI CTAG 4 cut(s) 786, 980, 1368, 1704
ZraI GACGTC 1 cut(s) 60
Zsp2I ATGCAT 1 cut(s) 1546
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.