Rw1G009110

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Chr1
OG0000213
Physical Location & Seq
Reverse (-)
20060802 .. 20062145
1344 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw1G009110.1

Sequence Viewer

Length: 1287 bp
ATGTCCCCCAAAAAATGTCTTAACTTAGCCGAAGCCAGCGATGGCGAAGAAAGAAGGCATCGTCTGGTTCGGCATTGCTGCCCTCTTCAGAAGCACAGGTGTGATGGATGCGTGATGAAGAAGAAGAAGAAAATAAGAGTATTAGAGAAGGTGAAGAAGACAACGAAGAAGTTGAAGCTGGAGGAGGAGGAGGCTAAGAAGTCACTCTACATATGTTTCGTTGAACAACGCGAGGGTGGCAGTGTTGCTATTGTTGTTCGTACAATCAAATTATCCGACTTGTTATCCTCCGATGAAGAATTGCAATTGCGGCAAGTGGCTTATAAGGCCGGGGAAGATGTTCCCGATTTTGTTGGTTGTGCTGTTTTCGGCTCCCAAATCATTTTCGCCGGTGGCGTGAGCCCCAGCTTGGGTTCCGGTGACAGATTTCCGCCAATAAGTTCTGAACTCTGGAATAGAGATGTTCATGCCTTCGAGGTTCATGACAATGTTTTCAGGAAGATGGATGCGACTTTACAAAGAGGGAAATTTTCCCCTATGATGGTGGAGCTGGGCGGGAAAGTGTACGCTCTTTCCTATGAGCTGATCCCTGATCCTCCATCATTCGAGGTATTTGACCCTAAAATAGGCCTGTGGAAGGGTTTGCCCCAACCTCCATTTTTCCAACCCGGATATGACTCTCATACTTCCTTCTTTTATGCAATTGCCGGCACCAAGATGTTTGTGTCCCATGACAAATGTCCGGTGTTCTGCTTTGACGTGGCACACCCAGACAGAGAATGGAGACTAGTCCCTACTATGTGTGGCGGCGGCCCTTTTCCTTTTATGGGCAACGCCTTTGTCCTGGACCTGCCGGAGCACCATGATGACAAGAAGAAGATCATGTTTGCTTATATTCATAATACGTGGCGGCTGGGAGTTTATCTTTTTTCCTTGGAGGAAGGTCAGGAATCCATTGCACCGATTGGTTATTTGAAGCTGCCATGGTGGCCTTATGAATTGGGTTCGGCAGCAGGCTGTGATTTTGTCCACATAGGAGGTCAGAAAGCCTGCATTCTTATCACCGAATTCAACCTTCCTTATGGTGAAGGACCTGACTATAAGCCAGGGACTTATAAGAAGCGGGGGGTTGCGATACCATTTCAATTTCAAGTTGATATCACTAAGGTGGACAGGGACGAGAAAAATTGTTTCACTCTCCAATTCATGACTCCTCGCACCTTCGAATTCCAGACCAACCGATCCACTTTTCCTCTACCTTTTACGGTTGGCTGCTTTCTGCTGTAA

Protein Analysis

428

Amino Acids

48.57

Weight (kDa)

8.1

Isoelectric Point (pI)

43.58

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 172 - 280 6.4e-09 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 324, 1116
Acc36I ACCTGC 1 cut(s) 858
AccB1I GGYRCC 1 cut(s) 710
AccII CGCG 1 cut(s) 231
AciI CCGC 7 cut(s) 310, 431, 555, 807, 810, 910, 1123
AclWI GGATC 3 cut(s) 580, 587, 1236
AcsI RAATTY 3 cut(s) 527, 1067, 1226
AcuI CTGAAG 1 cut(s) 71
AfaI GTAC 2 cut(s) 262, 566
AfiI CCNNNNNNNGG 6 cut(s) 409, 410, 541, 626, 637, 827
AgsI TTSAA 6 cut(s) 175, 224, 976, 1072, 1145, 1151
AhlI ACTAGT 1 cut(s) 787
AjiI CACGTC 1 cut(s) 760
AjnI CCWGG 2 cut(s) 843, 1105
AleI CACNNNNGTG 2 cut(s) 99, 1166
AluBI AGCT 5 cut(s) 178, 408, 550, 583, 979
AluI AGCT 5 cut(s) 178, 408, 550, 583, 979
Alw21I GWGCWC 1 cut(s) 861
Alw26I GTCTC 1 cut(s) 778
AlwI GGATC 3 cut(s) 580, 587, 1236
AoxI GGCC 4 cut(s) 327, 628, 811, 989
ApeKI GCWGC 4 cut(s) 78, 979, 1010, 1272
ApoI RAATTY 3 cut(s) 527, 1067, 1226
Asp700I GAANNNNTTC 1 cut(s) 339
AspS9I GGNCC 3 cut(s) 812, 847, 1091
AsuC2I CCSGG 2 cut(s) 331, 669
AsuHPI GGTGA 4 cut(s) 163, 431, 1054, 1097
AsuII TTCGAA 1 cut(s) 1224
AvaII GGWCC 2 cut(s) 847, 1091
BanI GGYRCC 1 cut(s) 710
BanII GRGCYC 1 cut(s) 404
BarI GAAGNNNNNNTAC 2 cut(s) 191, 223
BbsI GAAGAC 1 cut(s) 164
Bbv12I GWGCWC 1 cut(s) 861
BbvI GCAGC 4 cut(s) 65, 966, 1022, 1259
BccI CCATC 5 cut(s) 35, 98, 496, 535, 607
BciT130I CCWGG 2 cut(s) 845, 1107
BcnI CCSGG 2 cut(s) 331, 669
BcoDI GTCTC 1 cut(s) 778
BcuI ACTAGT 1 cut(s) 787
BfaI CTAG 1 cut(s) 788
BfuAI ACCTGC 1 cut(s) 858
BglI GCCNNNNNGGC 1 cut(s) 988
BisI GCNGC 8 cut(s) 79, 311, 808, 811, 911, 980, 1011, 1273
BlsI GCNGC 8 cut(s) 80, 312, 809, 812, 912, 981, 1012, 1274
Bme1390I CCNGG 4 cut(s) 331, 669, 845, 1107
Bme18I GGWCC 2 cut(s) 847, 1091
BmgBI CACGTC 1 cut(s) 760
BmgT120I GGNCC 3 cut(s) 812, 847, 1091
BmiI GGNNCC 3 cut(s) 373, 415, 712
BmrFI CCNGG 4 cut(s) 331, 669, 845, 1107
BmsI GCATC 3 cut(s) 67, 98, 496
BoxI GACNNNNGTC 1 cut(s) 738
BpiI GAAGAC 1 cut(s) 164
BpmI CTGGAG 1 cut(s) 200
Bpu14I TTCGAA 1 cut(s) 1224
BpuMI CCSGG 2 cut(s) 331, 669
BsaAI YACGTR 1 cut(s) 906
BsaJI CCNNGG 4 cut(s) 330, 933, 983, 1106
BsaWI WCCGGW 2 cut(s) 416, 742
Bsc4I CCNNNNNNNGG 6 cut(s) 409, 410, 541, 626, 637, 827
Bse118I RCCGGY 2 cut(s) 389, 707
Bse3DI GCAATG 2 cut(s) 73, 954
BseBI CCWGG 2 cut(s) 845, 1107
BseDI CCNNGG 4 cut(s) 330, 933, 983, 1106
BseGI GGATG 2 cut(s) 113, 511
BseLI CCNNNNNNNGG 6 cut(s) 409, 410, 541, 626, 637, 827
BseMI GCAATG 2 cut(s) 73, 954
BseRI GAGGAG 4 cut(s) 197, 200, 203, 1203
BseXI GCAGC 4 cut(s) 65, 966, 1022, 1259
BseYI CCCAGC 3 cut(s) 404, 550, 913
Bsh1236I CGCG 1 cut(s) 231
BshFI GGCC 4 cut(s) 329, 630, 813, 991
BshNI GGYRCC 1 cut(s) 710
BsiHKAI GWGCWC 1 cut(s) 861
BsiSI CCGG 7 cut(s) 330, 390, 417, 669, 708, 743, 854
BslFI GGGAC 4 cut(s) 712, 776, 1123, 1190
BslI CCNNNNNNNGG 6 cut(s) 409, 410, 541, 626, 637, 827
BsmAI GTCTC 1 cut(s) 778
BsmFI GGGAC 4 cut(s) 712, 776, 1123, 1190
BsmI GAATGC 1 cut(s) 1053
BsnI GGCC 4 cut(s) 329, 630, 813, 991
Bsp119I TTCGAA 1 cut(s) 1224
Bsp1286I GDGCHC 2 cut(s) 404, 861
Bsp143I GATC 4 cut(s) 585, 592, 879, 1241
Bsp19I CCATGG 1 cut(s) 983
BspACI CCGC 7 cut(s) 310, 431, 555, 807, 810, 910, 1123
BspANI GGCC 4 cut(s) 329, 630, 813, 991
BspFNI CGCG 1 cut(s) 231
BspHI TCATGA 2 cut(s) 481, 1206
BspLI GGNNCC 3 cut(s) 373, 415, 712
BspMI ACCTGC 1 cut(s) 858
BspPI GGATC 3 cut(s) 580, 587, 1236
BspT104I TTCGAA 1 cut(s) 1224
BspT107I GGYRCC 1 cut(s) 710
BsrDI GCAATG 2 cut(s) 73, 954
BsrFI RCCGGY 2 cut(s) 389, 707
BssAI RCCGGY 2 cut(s) 389, 707
BssECI CCNNGG 4 cut(s) 330, 933, 983, 1106
BssMI GATC 4 cut(s) 585, 592, 879, 1241
BssT1I CCWWGG 2 cut(s) 933, 983
Bst2UI CCWGG 2 cut(s) 845, 1107
Bst4CI ACNGT 1 cut(s) 1267
Bst6I CTCTTC 1 cut(s) 90
BstBAI YACGTR 1 cut(s) 906
BstBI TTCGAA 1 cut(s) 1224
BstC8I GCNNGC 4 cut(s) 37, 709, 1015, 1051
BstDEI CTNAG 3 cut(s) 25, 195, 1164
BstDSI CCRYGG 1 cut(s) 983
BstENI CCTNNNNNAGG 2 cut(s) 624, 635
BstF5I GGATG 2 cut(s) 113, 511
BstFNI CGCG 1 cut(s) 231
BstKTI GATC 4 cut(s) 588, 595, 882, 1244
BstMAI GTCTC 1 cut(s) 778
BstMBI GATC 4 cut(s) 585, 592, 879, 1241
BstMWI GCNNNNNNNGC 4 cut(s) 237, 310, 326, 988
BstNI CCWGG 2 cut(s) 845, 1107
BstPAI GACNNNNGTC 1 cut(s) 738
BstSCI CCNGG 4 cut(s) 329, 667, 843, 1105
BstUI CGCG 1 cut(s) 231
BstV1I GCAGC 4 cut(s) 65, 966, 1022, 1259
BstV2I GAAGAC 1 cut(s) 164
BsuRI GGCC 4 cut(s) 329, 630, 813, 991
BtgI CCRYGG 1 cut(s) 983
BtgZI GCGATG 1 cut(s) 54
BtrI CACGTC 1 cut(s) 760
BtsCI GGATG 2 cut(s) 113, 511
BtsI GCAGTG 1 cut(s) 247
BtsIMutI CAGTG 1 cut(s) 247
BveI ACCTGC 1 cut(s) 858
Cac8I GCNNGC 4 cut(s) 37, 709, 1015, 1051
CciI TCATGA 2 cut(s) 481, 1206
Cfr10I RCCGGY 2 cut(s) 389, 707
Cfr13I GGNCC 3 cut(s) 812, 847, 1091
Csp6I GTAC 2 cut(s) 261, 565
CviAII CATG 7 cut(s) 467, 482, 731, 863, 883, 984, 1207
CviQI GTAC 2 cut(s) 261, 565
DdeI CTNAG 3 cut(s) 25, 195, 1164
DpnI GATC 4 cut(s) 587, 594, 881, 1243
DpnII GATC 4 cut(s) 585, 592, 879, 1241
Eam1104I CTCTTC 1 cut(s) 90
EarI CTCTTC 1 cut(s) 90
EciI GGCGGA 1 cut(s) 420
Eco130I CCWWGG 2 cut(s) 933, 983
Eco147I AGGCCT 1 cut(s) 630
Eco24I GRGCYC 1 cut(s) 404
Eco32I GATATC 1 cut(s) 1159
Eco47I GGWCC 2 cut(s) 847, 1091
Eco57I CTGAAG 1 cut(s) 71
EcoNI CCTNNNNNAGG 2 cut(s) 624, 635
EcoO109I RGGNCCY 1 cut(s) 1091
EcoRI GAATTC 2 cut(s) 1067, 1226
EcoRII CCWGG 2 cut(s) 843, 1105
EcoRV GATATC 1 cut(s) 1159
EcoT14I CCWWGG 2 cut(s) 933, 983
EcoT38I GRGCYC 1 cut(s) 404
ErhI CCWWGG 2 cut(s) 933, 983
FaeI CATG 7 cut(s) 470, 485, 734, 866, 886, 987, 1210
FaqI GGGAC 4 cut(s) 712, 776, 1123, 1190
FatI CATG 7 cut(s) 466, 481, 730, 862, 882, 983, 1206
FauI CCCGC 2 cut(s) 548, 1116
FauNDI CATATG 1 cut(s) 212
Fnu4HI GCNGC 8 cut(s) 79, 311, 808, 811, 911, 980, 1011, 1273
FokI GGATG 2 cut(s) 120, 518
FriOI GRGCYC 1 cut(s) 404
Fsp4HI GCNGC 8 cut(s) 79, 311, 808, 811, 911, 980, 1011, 1273
FspBI CTAG 1 cut(s) 788
GluI GCNGC 8 cut(s) 79, 311, 808, 811, 911, 980, 1011, 1273
GsaI CCCAGC 3 cut(s) 408, 554, 917
GsuI CTGGAG 1 cut(s) 200
HaeIII GGCC 4 cut(s) 329, 630, 813, 991
HapII CCGG 7 cut(s) 330, 390, 417, 669, 708, 743, 854
Hin1II CATG 7 cut(s) 470, 485, 734, 866, 886, 987, 1210
HinfI GANTC 3 cut(s) 677, 950, 1210
HpaII CCGG 7 cut(s) 330, 390, 417, 669, 708, 743, 854
HphI GGTGA 4 cut(s) 163, 431, 1054, 1097
Hpy166II GTNNAC 3 cut(s) 565, 1030, 1171
Hpy188I TCNGA 5 cut(s) 90, 277, 292, 445, 1044
Hpy188III TCNNGA 7 cut(s) 344, 451, 482, 496, 947, 1207, 1231
Hpy8I GTNNAC 3 cut(s) 565, 1030, 1171
HpyAV CCTTC 9 cut(s) 48, 142, 481, 631, 700, 935, 1082, 1085, 1231
HpyCH4III ACNGT 1 cut(s) 1267
HpyCH4IV ACGT 2 cut(s) 759, 905
HpyCH4V TGCA 4 cut(s) 304, 701, 959, 1053
HpyF10VI GCNNNNNNNGC 4 cut(s) 237, 310, 326, 988
HpyF3I CTNAG 3 cut(s) 25, 195, 1164
HpySE526I ACGT 2 cut(s) 759, 905
Hsp92II CATG 7 cut(s) 470, 485, 734, 866, 886, 987, 1210
KroI GCCGGC 1 cut(s) 707
KroNI GCCGGC 1 cut(s) 709
Kzo9I GATC 4 cut(s) 585, 592, 879, 1241
LmnI GCTCC 3 cut(s) 377, 547, 856
Lsp1109I GCAGC 4 cut(s) 65, 966, 1022, 1259
LweI GCATC 3 cut(s) 67, 98, 496
MaeI CTAG 1 cut(s) 788
MaeII ACGT 2 cut(s) 759, 905
MaeIII GTNAC 2 cut(s) 201, 419
MalI GATC 4 cut(s) 587, 594, 881, 1243
MboI GATC 4 cut(s) 585, 592, 879, 1241
MfeI CAATTG 2 cut(s) 305, 702
MhlI GDGCHC 2 cut(s) 404, 861
MlyI GAGTC 2 cut(s) 671, 1204
MmeI TCCRAC 2 cut(s) 300, 688
MroNI GCCGGC 1 cut(s) 707
MroXI GAANNNNTTC 1 cut(s) 339
MseI TTAA 1 cut(s) 21
MslI CAYNNNNRTG 5 cut(s) 99, 486, 716, 864, 1166
MspI CCGG 7 cut(s) 330, 390, 417, 669, 708, 743, 854
MspR9I CCNGG 4 cut(s) 331, 669, 845, 1107
MunI CAATTG 2 cut(s) 305, 702
Mva1269I GAATGC 1 cut(s) 1053
MvaI CCWGG 2 cut(s) 845, 1107
MvnI CGCG 1 cut(s) 231
MwoI GCNNNNNNNGC 4 cut(s) 237, 310, 326, 988
NaeI GCCGGC 1 cut(s) 709
NciI CCSGG 2 cut(s) 331, 669
NcoI CCATGG 1 cut(s) 983
NdeI CATATG 1 cut(s) 212
NdeII GATC 4 cut(s) 585, 592, 879, 1241
NgoMIV GCCGGC 1 cut(s) 707
NlaIII CATG 7 cut(s) 470, 485, 734, 866, 886, 987, 1210
NlaIV GGNNCC 3 cut(s) 373, 415, 712
NmuCI GTSAC 2 cut(s) 201, 419
NspV TTCGAA 1 cut(s) 1224
OliI CACNNNNGTG 2 cut(s) 99, 1166
PagI TCATGA 2 cut(s) 481, 1206
PceI AGGCCT 1 cut(s) 630
PcsI WCGNNNNNNNCGW 1 cut(s) 393
PctI GAATGC 1 cut(s) 1053
PdiI GCCGGC 1 cut(s) 709
PdmI GAANNNNTTC 1 cut(s) 339
PfeI GAWTC 1 cut(s) 950
PfoI TCCNGGA 1 cut(s) 843
PkrI GCNGC 8 cut(s) 80, 312, 809, 812, 912, 981, 1012, 1274
PleI GAGTC 2 cut(s) 671, 1204
PpsI GAGTC 2 cut(s) 671, 1204
Ppu21I YACGTR 1 cut(s) 906
PpuMI RGGWCCY 1 cut(s) 1091
PshAI GACNNNNGTC 1 cut(s) 738
PsiI TTATAA 2 cut(s) 324, 1116
Psp5II RGGWCCY 1 cut(s) 1091
Psp6I CCWGG 2 cut(s) 843, 1105
PspFI CCCAGC 3 cut(s) 404, 550, 913
PspGI CCWGG 2 cut(s) 843, 1105
PspN4I GGNNCC 3 cut(s) 373, 415, 712
PspPI GGNCC 3 cut(s) 812, 847, 1091
PspPPI RGGWCCY 1 cut(s) 1091
RsaI GTAC 2 cut(s) 262, 566
RsaNI GTAC 2 cut(s) 261, 565
RseI CAYNNNNRTG 5 cut(s) 99, 486, 716, 864, 1166
SaqAI TTAA 1 cut(s) 21
SatI GCNGC 8 cut(s) 79, 311, 808, 811, 911, 980, 1011, 1273
Sau3AI GATC 4 cut(s) 585, 592, 879, 1241
Sau96I GGNCC 3 cut(s) 812, 847, 1091
SchI GAGTC 2 cut(s) 671, 1204
ScrFI CCNGG 4 cut(s) 331, 669, 845, 1107
SduI GDGCHC 2 cut(s) 404, 861
SfaNI GCATC 3 cut(s) 67, 98, 496
SfuI TTCGAA 1 cut(s) 1224
SgrAI CRCCGGYG 1 cut(s) 389
SinI GGWCC 2 cut(s) 847, 1091
SmiMI CAYNNNNRTG 5 cut(s) 99, 486, 716, 864, 1166
SpeI ACTAGT 1 cut(s) 787
SseBI AGGCCT 1 cut(s) 630
SsiI CCGC 7 cut(s) 310, 431, 555, 807, 810, 910, 1123
SspMI CTAG 1 cut(s) 788
StuI AGGCCT 1 cut(s) 630
StyD4I CCNGG 4 cut(s) 329, 667, 843, 1105
StyI CCWWGG 2 cut(s) 933, 983
TaaI ACNGT 1 cut(s) 1267
TaiI ACGT 2 cut(s) 762, 908
TaqI TCGA 3 cut(s) 474, 606, 1224
TauI GCSGC 4 cut(s) 313, 810, 813, 913
TfiI GAWTC 1 cut(s) 950
Tru1I TTAA 1 cut(s) 21
Tru9I TTAA 1 cut(s) 21
TscAI CASTG 1 cut(s) 247
TseFI GTSAC 2 cut(s) 201, 419
TseI GCWGC 4 cut(s) 78, 979, 1010, 1272
Tsp45I GTSAC 2 cut(s) 201, 419
TspDTI ATGAA 7 cut(s) 131, 309, 455, 470, 887, 1011, 1195
TspRI CASTG 1 cut(s) 247
VpaK11BI GGWCC 2 cut(s) 847, 1091
XagI CCTNNNNNAGG 2 cut(s) 624, 635
XapI RAATTY 3 cut(s) 527, 1067, 1226
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XmnI GAANNNNTTC 1 cut(s) 339
XspI CTAG 1 cut(s) 788
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.