FvH4_1g04982

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000213
Physical Location & Seq
Forward (+)
2654178 .. 2655467
1290 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04982.t1

Sequence Viewer

Length: 1290 bp
ATGTCTCCCAAAAACACTCTTAACCTAAAAGCCAACAAAGCCACCGATGATGGTGGTCACCGCCGTCAACCACCGCTTAAGTCTGACAAGAAGAAGAAGAAGAAGAAGGACAAGAAGAAGAAGAAGAAGAGGAGTAAGAAGTTGAAGCTAAATGAGTCGGAGGATAACAAGACACTGTACATTTGTTTCGACGAAGAACACGACGCTAGAGACGGAGACCGGATCACTTATGTTGTCCGTTCCATCAAATTGTCCGATCTGTTGTCGTCGGATTCGGTTGATAATTTGCAATTACGGCAGGTCGCTTATAAGACCGGGGACGAACTCCCCGGTTTTATAAGTTGCGGTGTGGTGGGCTCCCAAATGGTTTTCGCCGGCGGCAAGAGGCCCCCCCTCTGGTCCGATCCAAACCATACTTGGCAAAGAGATGTTTACGTCTTCGAAACTGACCCCGACAAGCAGCCTCCTGGTGATAGCAGCTCTGTAATCCAGAAGATGGATGCCCAATTGCTTCAAGCCAAGTATTTTCCTGTGATGATAGAGGTGGGAGGCAAACTGTATGCACTTTCGTATGAGCGGGTCTCGGATCCCGCATTTGAGGTATTCGATCCCGAAATGGGGACTTGGTCTGCTCTGCCACAGCCTCCATTCTTCCGACGAGATGGTCCGTATCAGCGCAATTGCCCCTTGTCTTATGCAATAACTGGCACCAAGATGTTTGTGTCTCAGGGTAGATTTCCTGTATATTGCTTCGATGTAGCTCACCCAGACAGAGAATGGAGGTTAGTCCGTTCCATGTGCGAACGCGGCCCTTTTCCTTTTGTTAACAGAGCTCTGGTCCTGGACCTCCCTGGTGACCATAACAATAACAGGAAGATAATGTTTGGTTACACGAATGATCGTTGGTATCTAGTAGTTTATATTATGTGCTTGGATGAAAATCAAGAGTCTATCACTCGAATTGCTGATTTGAAGCTGCCAATGTTGCCTGAGGAATTTGAATTTGCAAACATATGGTACATCGTCCATATAGGAGGCCAGAAAGCCTGCCTTGTTTCCCCTGAAATGACTCTCCGGGGGGAACTAGCACCTGAATATGAAGATGAAATTGGGAGTCATAAGACGCGGGGTGTTGTCATTCCATTTCAGTTTGAAGTTGATATCACCAAAATCGACAAGGACACTAAGAATTGTTTGACTCTCCAGTTCATGCCTACTCGTATCTTCGAATTCTATACCAGCCCATCCACTTATGCTTGTCCTCGAACTGATGGTTGCTTTGTGCTGTAA

Protein Analysis

430

Amino Acids

49.3

Weight (kDa)

8.36

Isoelectric Point (pI)

53.69

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 170 - 263 6.8e-12 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 309, 338
AasI GACNNNNNNGTC 1 cut(s) 663
Acc36I ACCTGC 1 cut(s) 289
AccB1I GGYRCC 1 cut(s) 707
AccB7I CCANNNNNTGG 1 cut(s) 496
AccBSI CCGCTC 1 cut(s) 577
AccII CGCG 2 cut(s) 807, 1126
AciI CCGC 8 cut(s) 61, 74, 345, 378, 577, 591, 807, 1126
AclWI GGATC 5 cut(s) 230, 398, 581, 594, 602
AcsI RAATTY 3 cut(s) 995, 1001, 1229
AfaI GTAC 2 cut(s) 179, 1019
AfiI CCNNNNNNNGG 4 cut(s) 396, 496, 617, 618
AflII CTTAAG 1 cut(s) 77
AgsI TTSAA 5 cut(s) 145, 515, 973, 1001, 1154
AjnI CCWGG 3 cut(s) 466, 840, 850
AjuI GAANNNNNNNTTGG 2 cut(s) 1092, 1124
AluBI AGCT 5 cut(s) 148, 480, 761, 833, 976
AluI AGCT 5 cut(s) 148, 480, 761, 833, 976
Alw21I GWGCWC 1 cut(s) 835
Alw26I GTCTC 5 cut(s) 9, 204, 210, 586, 729
AlwI GGATC 5 cut(s) 230, 398, 581, 594, 602
AoxI GGCC 3 cut(s) 386, 808, 1036
ApeKI GCWGC 3 cut(s) 460, 477, 976
ApoI RAATTY 3 cut(s) 995, 1001, 1229
AspLEI GCGC 1 cut(s) 678
AspS9I GGNCC 6 cut(s) 387, 399, 665, 809, 838, 844
AsuC2I CCSGG 3 cut(s) 316, 330, 1076
AsuHPI GGTGA 5 cut(s) 50, 482, 755, 866, 1156
AsuII TTCGAA 2 cut(s) 441, 1227
AvaII GGWCC 4 cut(s) 399, 665, 838, 844
AxyI CCTNAGG 1 cut(s) 990
BamHI GGATCC 1 cut(s) 586
BanI GGYRCC 1 cut(s) 707
BanII GRGCYC 2 cut(s) 359, 835
BbsI GAAGAC 1 cut(s) 430
Bbv12I GWGCWC 1 cut(s) 835
BbvI GCAGC 3 cut(s) 472, 489, 963
BccI CCATC 6 cut(s) 44, 251, 490, 656, 1252, 1265
BceAI ACGGC 2 cut(s) 48, 311
BciT130I CCWGG 3 cut(s) 468, 842, 852
BcnI CCSGG 3 cut(s) 316, 330, 1076
BcoDI GTCTC 5 cut(s) 9, 204, 210, 586, 729
BfaI CTAG 3 cut(s) 207, 911, 1085
BfrI CTTAAG 1 cut(s) 77
BfuAI ACCTGC 1 cut(s) 289
BisI GCNGC 5 cut(s) 379, 461, 478, 808, 977
BlsI GCNGC 5 cut(s) 380, 462, 479, 809, 978
Bme1390I CCNGG 6 cut(s) 316, 330, 468, 842, 852, 1076
Bme18I GGWCC 4 cut(s) 399, 665, 838, 844
BmgT120I GGNCC 6 cut(s) 387, 399, 665, 809, 838, 844
BmiI GGNNCC 4 cut(s) 358, 389, 588, 709
BmrFI CCNGG 6 cut(s) 316, 330, 468, 842, 852, 1076
BmsI GCATC 1 cut(s) 490
BpiI GAAGAC 1 cut(s) 430
BplI GAGNNNNNCTC 2 cut(s) 566, 598
BpmI CTGGAG 1 cut(s) 1187
Bpu14I TTCGAA 2 cut(s) 441, 1227
BpuMI CCSGG 3 cut(s) 316, 330, 1076
BsaBI GATNNNNATC 1 cut(s) 939
BsaI GGTCTC 2 cut(s) 210, 586
BsaJI CCNNGG 4 cut(s) 315, 328, 850, 1075
BsaWI WCCGGW 1 cut(s) 219
Bsc4I CCNNNNNNNGG 4 cut(s) 396, 496, 617, 618
Bse118I RCCGGY 1 cut(s) 374
Bse1I ACTGG 2 cut(s) 709, 1204
Bse21I CCTNAGG 1 cut(s) 990
Bse8I GATNNNNATC 1 cut(s) 939
BseBI CCWGG 3 cut(s) 468, 842, 852
BseDI CCNNGG 4 cut(s) 315, 328, 850, 1075
BseGI GGATG 3 cut(s) 505, 940, 1244
BseJI GATNNNNATC 1 cut(s) 939
BseLI CCNNNNNNNGG 4 cut(s) 396, 496, 617, 618
BseMII CTCAG 2 cut(s) 740, 981
BseNI ACTGG 2 cut(s) 709, 1204
BseRI GAGGAG 1 cut(s) 145
BseXI GCAGC 3 cut(s) 472, 489, 963
Bsh1236I CGCG 2 cut(s) 807, 1126
BshFI GGCC 3 cut(s) 388, 810, 1038
BshNI GGYRCC 1 cut(s) 707
BsiHKAI GWGCWC 1 cut(s) 835
BsiSI CCGG 5 cut(s) 220, 315, 330, 375, 1075
BslFI GGGAC 2 cut(s) 332, 634
BslI CCNNNNNNNGG 4 cut(s) 396, 496, 617, 618
BsmAI GTCTC 5 cut(s) 9, 204, 210, 586, 729
BsmBI CGTCTC 1 cut(s) 204
BsmFI GGGAC 2 cut(s) 332, 634
BsnI GGCC 3 cut(s) 388, 810, 1038
Bso31I GGTCTC 2 cut(s) 210, 586
Bsp119I TTCGAA 2 cut(s) 441, 1227
Bsp1286I GDGCHC 2 cut(s) 359, 835
Bsp1407I TGTACA 1 cut(s) 177
Bsp143I GATC 6 cut(s) 222, 256, 403, 586, 607, 898
BspACI CCGC 8 cut(s) 61, 74, 345, 378, 577, 591, 807, 1126
BspANI GGCC 3 cut(s) 388, 810, 1038
BspCNI CTCAG 2 cut(s) 739, 982
BspFNI CGCG 2 cut(s) 807, 1126
BspLI GGNNCC 4 cut(s) 358, 389, 588, 709
BspMI ACCTGC 1 cut(s) 289
BspPI GGATC 5 cut(s) 230, 398, 581, 594, 602
BspT104I TTCGAA 2 cut(s) 441, 1227
BspT107I GGYRCC 1 cut(s) 707
BspTI CTTAAG 1 cut(s) 77
BspTNI GGTCTC 2 cut(s) 210, 586
BsrBI CCGCTC 1 cut(s) 577
BsrFI RCCGGY 1 cut(s) 374
BsrGI TGTACA 1 cut(s) 177
BsrI ACTGG 2 cut(s) 709, 1204
BssAI RCCGGY 1 cut(s) 374
BssECI CCNNGG 4 cut(s) 315, 328, 850, 1075
BssMI GATC 6 cut(s) 222, 256, 403, 586, 607, 898
Bst2UI CCWGG 3 cut(s) 468, 842, 852
Bst4CI ACNGT 2 cut(s) 177, 558
Bst6I CTCTTC 1 cut(s) 122
BstAFI CTTAAG 1 cut(s) 77
BstAUI TGTACA 1 cut(s) 177
BstBI TTCGAA 2 cut(s) 441, 1227
BstC8I GCNNGC 2 cut(s) 376, 1048
BstDEI CTNAG 3 cut(s) 726, 990, 1185
BstEII GGTNACC 2 cut(s) 56, 854
BstF5I GGATG 3 cut(s) 505, 940, 1244
BstFNI CGCG 2 cut(s) 807, 1126
BstHHI GCGC 1 cut(s) 678
BstKTI GATC 6 cut(s) 225, 259, 406, 589, 610, 901
BstMAI GTCTC 5 cut(s) 9, 204, 210, 586, 729
BstMBI GATC 6 cut(s) 222, 256, 403, 586, 607, 898
BstMWI GCNNNNNNNGC 4 cut(s) 38, 295, 807, 985
BstNI CCWGG 3 cut(s) 468, 842, 852
BstPI GGTNACC 2 cut(s) 56, 854
BstSCI CCNGG 6 cut(s) 314, 328, 466, 840, 850, 1074
BstUI CGCG 2 cut(s) 807, 1126
BstV1I GCAGC 3 cut(s) 472, 489, 963
BstV2I GAAGAC 1 cut(s) 430
BstX2I RGATCY 1 cut(s) 586
BstYI RGATCY 1 cut(s) 586
Bsu36I CCTNAGG 1 cut(s) 990
BsuRI GGCC 3 cut(s) 388, 810, 1038
BtsCI GGATG 3 cut(s) 505, 940, 1244
BtsIMutI CAGTG 1 cut(s) 173
BveI ACCTGC 1 cut(s) 289
Cac8I GCNNGC 2 cut(s) 376, 1048
CfoI GCGC 1 cut(s) 678
Cfr10I RCCGGY 1 cut(s) 374
Cfr13I GGNCC 6 cut(s) 387, 399, 665, 809, 838, 844
CseI GACGC 2 cut(s) 212, 1132
Csp6I GTAC 2 cut(s) 178, 1018
CviAII CATG 2 cut(s) 796, 1210
CviQI GTAC 2 cut(s) 178, 1018
DdeI CTNAG 3 cut(s) 726, 990, 1185
DpnI GATC 6 cut(s) 224, 258, 405, 588, 609, 900
DpnII GATC 6 cut(s) 222, 256, 403, 586, 607, 898
DrdI GACNNNNNNGTC 1 cut(s) 663
DseDI GACNNNNNNGTC 1 cut(s) 663
Eam1104I CTCTTC 1 cut(s) 122
EarI CTCTTC 1 cut(s) 122
Ecl136II GAGCTC 1 cut(s) 833
Eco24I GRGCYC 2 cut(s) 359, 835
Eco31I GGTCTC 2 cut(s) 210, 586
Eco32I GATATC 1 cut(s) 1162
Eco47I GGWCC 4 cut(s) 399, 665, 838, 844
Eco53kI GAGCTC 1 cut(s) 833
Eco81I CCTNAGG 1 cut(s) 990
Eco91I GGTNACC 2 cut(s) 56, 854
EcoICRI GAGCTC 1 cut(s) 833
EcoO109I RGGNCCY 1 cut(s) 387
EcoO65I GGTNACC 2 cut(s) 56, 854
EcoRI GAATTC 1 cut(s) 1229
EcoRII CCWGG 3 cut(s) 466, 840, 850
EcoRV GATATC 1 cut(s) 1162
EcoT38I GRGCYC 2 cut(s) 359, 835
Esp3I CGTCTC 1 cut(s) 204
FaeI CATG 2 cut(s) 799, 1213
FalI AAGNNNNNCTT 2 cut(s) 1035, 1067
FaqI GGGAC 2 cut(s) 332, 634
FatI CATG 2 cut(s) 795, 1209
FauI CCCGC 3 cut(s) 570, 598, 1119
FauNDI CATATG 1 cut(s) 1013
Fnu4HI GCNGC 5 cut(s) 379, 461, 478, 808, 977
FokI GGATG 3 cut(s) 512, 947, 1231
FriOI GRGCYC 2 cut(s) 359, 835
Fsp4HI GCNGC 5 cut(s) 379, 461, 478, 808, 977
FspBI CTAG 3 cut(s) 207, 911, 1085
GlaI GCGC 1 cut(s) 677
GluI GCNGC 5 cut(s) 379, 461, 478, 808, 977
GsuI CTGGAG 1 cut(s) 1187
HaeIII GGCC 3 cut(s) 388, 810, 1038
HapII CCGG 5 cut(s) 220, 315, 330, 375, 1075
HgaI GACGC 2 cut(s) 212, 1132
HhaI GCGC 1 cut(s) 678
Hin1II CATG 2 cut(s) 799, 1213
Hin6I GCGC 1 cut(s) 676
HinP1I GCGC 1 cut(s) 676
HincII GTYRAC 2 cut(s) 68, 826
HindII GTYRAC 2 cut(s) 68, 826
HinfI GANTC 6 cut(s) 155, 272, 947, 1069, 1114, 1198
HpaI GTTAAC 1 cut(s) 826
HpaII CCGG 5 cut(s) 220, 315, 330, 375, 1075
HphI GGTGA 5 cut(s) 50, 482, 755, 866, 1156
Hpy166II GTNNAC 3 cut(s) 68, 433, 826
Hpy188I TCNGA 7 cut(s) 85, 160, 256, 271, 403, 586, 656
Hpy188III TCNNGA 3 cut(s) 490, 611, 944
Hpy8I GTNNAC 3 cut(s) 68, 433, 826
Hpy99I CGWCG 4 cut(s) 194, 206, 271, 660
HpyAV CCTTC 1 cut(s) 100
HpyCH4III ACNGT 2 cut(s) 177, 558
HpyCH4IV ACGT 1 cut(s) 435
HpyCH4V TGCA 4 cut(s) 289, 563, 698, 1007
HpyF10VI GCNNNNNNNGC 4 cut(s) 38, 295, 807, 985
HpyF3I CTNAG 3 cut(s) 726, 990, 1185
HpySE526I ACGT 1 cut(s) 435
Hsp92II CATG 2 cut(s) 799, 1213
HspAI GCGC 1 cut(s) 676
KroI GCCGGC 1 cut(s) 374
KroNI GCCGGC 1 cut(s) 376
KspAI GTTAAC 1 cut(s) 826
Kzo9I GATC 6 cut(s) 222, 256, 403, 586, 607, 898
LmnI GCTCC 1 cut(s) 362
Lsp1109I GCAGC 3 cut(s) 472, 489, 963
LweI GCATC 1 cut(s) 490
MaeI CTAG 3 cut(s) 207, 911, 1085
MaeII ACGT 1 cut(s) 435
MaeIII GTNAC 3 cut(s) 56, 854, 887
MalI GATC 6 cut(s) 224, 258, 405, 588, 609, 900
MbiI CCGCTC 1 cut(s) 577
MboI GATC 6 cut(s) 222, 256, 403, 586, 607, 898
MfeI CAATTG 2 cut(s) 506, 679
MflI RGATCY 1 cut(s) 586
MhlI GDGCHC 2 cut(s) 359, 835
MlyI GAGTC 5 cut(s) 164, 956, 1063, 1123, 1192
MmeI TCCRAC 3 cut(s) 138, 249, 679
MreI CGCCGGCG 1 cut(s) 374
MroNI GCCGGC 1 cut(s) 374
MseI TTAA 3 cut(s) 21, 78, 825
MslI CAYNNNNRTG 1 cut(s) 713
MspCI CTTAAG 1 cut(s) 77
MspI CCGG 5 cut(s) 220, 315, 330, 375, 1075
MspR9I CCNGG 6 cut(s) 316, 330, 468, 842, 852, 1076
MunI CAATTG 2 cut(s) 506, 679
MvaI CCWGG 3 cut(s) 468, 842, 852
MvnI CGCG 2 cut(s) 807, 1126
MwoI GCNNNNNNNGC 4 cut(s) 38, 295, 807, 985
NaeI GCCGGC 1 cut(s) 376
NciI CCSGG 3 cut(s) 316, 330, 1076
NdeI CATATG 1 cut(s) 1013
NdeII GATC 6 cut(s) 222, 256, 403, 586, 607, 898
NgoMIV GCCGGC 1 cut(s) 374
NlaIII CATG 2 cut(s) 799, 1213
NlaIV GGNNCC 4 cut(s) 358, 389, 588, 709
NmuCI GTSAC 2 cut(s) 56, 854
NspV TTCGAA 2 cut(s) 441, 1227
PcsI WCGNNNNNNNCGW 1 cut(s) 198
PdiI GCCGGC 1 cut(s) 376
PfeI GAWTC 1 cut(s) 272
PflFI GACNNNGTC 1 cut(s) 625
PflMI CCANNNNNTGG 1 cut(s) 496
PfoI TCCNGGA 1 cut(s) 840
PkrI GCNGC 5 cut(s) 380, 462, 479, 809, 978
PleI GAGTC 5 cut(s) 163, 955, 1063, 1122, 1192
PpsI GAGTC 5 cut(s) 163, 955, 1063, 1122, 1192
PsiI TTATAA 2 cut(s) 309, 338
Psp124BI GAGCTC 1 cut(s) 835
Psp6I CCWGG 3 cut(s) 466, 840, 850
PspEI GGTNACC 2 cut(s) 56, 854
PspGI CCWGG 3 cut(s) 466, 840, 850
PspN4I GGNNCC 4 cut(s) 358, 389, 588, 709
PspPI GGNCC 6 cut(s) 387, 399, 665, 809, 838, 844
PsuI RGATCY 1 cut(s) 586
PsyI GACNNNGTC 1 cut(s) 625
RsaI GTAC 2 cut(s) 179, 1019
RsaNI GTAC 2 cut(s) 178, 1018
RseI CAYNNNNRTG 1 cut(s) 713
SacI GAGCTC 1 cut(s) 835
SaqAI TTAA 3 cut(s) 21, 78, 825
SatI GCNGC 5 cut(s) 379, 461, 478, 808, 977
Sau3AI GATC 6 cut(s) 222, 256, 403, 586, 607, 898
Sau96I GGNCC 6 cut(s) 387, 399, 665, 809, 838, 844
SchI GAGTC 5 cut(s) 164, 956, 1063, 1123, 1192
ScrFI CCNGG 6 cut(s) 316, 330, 468, 842, 852, 1076
SduI GDGCHC 2 cut(s) 359, 835
SfaNI GCATC 1 cut(s) 490
SfuI TTCGAA 2 cut(s) 441, 1227
SgrAI CRCCGGYG 1 cut(s) 374
SinI GGWCC 4 cut(s) 399, 665, 838, 844
SmiMI CAYNNNNRTG 1 cut(s) 713
SmlI CTYRAG 1 cut(s) 77
SmoI CTYRAG 1 cut(s) 77
SsiI CCGC 8 cut(s) 61, 74, 345, 378, 577, 591, 807, 1126
SspMI CTAG 3 cut(s) 207, 911, 1085
SstI GAGCTC 1 cut(s) 835
StyD4I CCNGG 6 cut(s) 314, 328, 466, 840, 850, 1074
TaaI ACNGT 2 cut(s) 177, 558
TaiI ACGT 1 cut(s) 438
TaqI TCGA 8 cut(s) 189, 441, 606, 753, 958, 1173, 1227, 1264
TatI WGTACW 1 cut(s) 177
TauI GCSGC 2 cut(s) 381, 810
TfiI GAWTC 1 cut(s) 272
Tru1I TTAA 3 cut(s) 21, 78, 825
Tru9I TTAA 3 cut(s) 21, 78, 825
TscAI CASTG 1 cut(s) 180
TseFI GTSAC 2 cut(s) 56, 854
TseI GCWGC 3 cut(s) 460, 477, 976
Tsp45I GTSAC 2 cut(s) 56, 854
TspDTI ATGAA 4 cut(s) 951, 1113, 1119, 1198
TspGWI ACGGA 4 cut(s) 227, 228, 657, 779
TspRI CASTG 1 cut(s) 180
Tth111I GACNNNGTC 1 cut(s) 625
Van91I CCANNNNNTGG 1 cut(s) 496
Vha464I CTTAAG 1 cut(s) 77
VpaK11BI GGWCC 4 cut(s) 399, 665, 838, 844
XapI RAATTY 3 cut(s) 995, 1001, 1229
XcmI CCANNNNNNNNNTGG 2 cut(s) 414, 774
XspI CTAG 3 cut(s) 207, 911, 1085
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.