Rmu_sc0003781.1_g000013

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0003781.1
OG0000213
Physical Location & Seq
Reverse (-)
51042 .. 52340
1299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0003781.1_g000013.1.cds

Sequence Viewer

Length: 1299 bp
atgtcgcccaaaaccactctcaacctagccaacagagccagcggtggcgaagaagaagggcgtcatctgcttcgacgctgccgtgaaccaccgcatcataaggccgataagtacaggaggtctaagaagaagaagagaagtgagaagctgaagttgaacgaggaggaggctaagaagtctctgtacatatgtcacattgaacaccaccctggaaagtgggttgcttatgtcgtccgcgccatcaagttgtccgatttgttatcctcctcctcctccgatgatgatgatttgaaattacggcaagtgggttataaagccggggatgaactccccggttctgtgggttgcggtgtgtggggctcccggattgttttcgccgccggcatgaaaccctgcgcccgtatgccttcattcgatcgtcccgacatagtttggcatagacatgtttatgcctttgaaactgaccccaacaagcagcctcgtgataatagtagaattaccaagatggatggcacattagttgaagccaagtttcgtccacggatggaggagctggggggcaaactgtatgcactttcatataggctggtggctgatcctcccgcatttgaggtattcgacccgaaagtggggagttgggcgcccctgcccgagcctccattcttcaaacgtcatggtcagtataaccgcggtggcaacctctcttatgcagttactggcaccaagatgtttgtgtctcaggagagatgtcctgtgttctgtttcgatgtagctcacccagacagagaatggagattagtttcttctatgtgccaacgcggcccttttccttttggaaacaaagctttggtcctggacctgccggcgggtgctgatgacaacaagaagataatgtttgcctatactatgggtcgttggtatctacaagtttatcttatgtccttagaagaaaatcaagaatctatcacaccgattggtgattttaagctgccaaggttgcctcaggaatatgaatttgcaaaaagatgttattttgttcatataggaggtcagaaagcctgtattattgcccccgaattggttatgacttataaacaaggacctgatattaacgaggctgggactcataggacacggggtgttgccatgccatttcaatttgaagttgatatcaccaaggtcgacaaggacgagaagaattgtttgaccctccaattcatgcctactcgtatcttcaaattctataccaacccatccacttttcctgatcctgaagcatatggttgctttgtgctataa

Protein Analysis

432

Amino Acids

49.36

Weight (kDa)

9.05

Isoelectric Point (pI)

51.23

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 312, 1092
Acc36I ACCTGC 1 cut(s) 867
AccB1I GGYRCC 2 cut(s) 640, 719
AccI GTMKAC 1 cut(s) 1182
AccII CGCG 3 cut(s) 237, 690, 819
AclWI GGATC 2 cut(s) 590, 1262
AcsI RAATTY 2 cut(s) 1013, 1238
AcuI CTGAAG 2 cut(s) 170, 1293
AcyI GRCGYC 2 cut(s) 61, 641
AdeI CACNNNGTG 1 cut(s) 1139
AfaI GTAC 2 cut(s) 113, 185
AfiI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
AflIII ACRYGT 1 cut(s) 442
AgsI TTSAA 9 cut(s) 157, 200, 292, 458, 524, 667, 1157, 1163, 1237
AjnI CCWGG 2 cut(s) 208, 852
AluBI AGCT 5 cut(s) 148, 553, 773, 845, 988
AluI AGCT 5 cut(s) 148, 553, 773, 845, 988
Alw26I GTCTC 2 cut(s) 183, 741
AlwI GGATC 2 cut(s) 590, 1262
AlwNI CAGNNNCTG 1 cut(s) 716
Ama87I CYCGRG 1 cut(s) 650
AoxI GGCC 2 cut(s) 102, 820
ApeKI GCWGC 3 cut(s) 78, 475, 988
ApoI RAATTY 2 cut(s) 1013, 1238
ArsI GACNNNNNNTTYG 2 cut(s) 834, 866
AspLEI GCGC 3 cut(s) 239, 398, 643
AspS9I GGNCC 4 cut(s) 821, 850, 856, 1100
AsuC2I CCSGG 3 cut(s) 319, 333, 364
AsuHPI GGTGA 3 cut(s) 767, 989, 1165
AvaI CYCGRG 1 cut(s) 650
AvaII GGWCC 3 cut(s) 850, 856, 1100
AxyI CCTNAGG 1 cut(s) 1002
BanI GGYRCC 2 cut(s) 640, 719
BanII GRGCYC 1 cut(s) 362
BarI GAAGNNNNNNTAC 2 cut(s) 167, 199
BauI CACGAG 1 cut(s) 480
BbvI GCAGC 3 cut(s) 65, 487, 975
BccI CCATC 5 cut(s) 248, 499, 503, 538, 1261
BceAI ACGGC 2 cut(s) 66, 314
BciT130I CCWGG 2 cut(s) 210, 854
BcnI CCSGG 3 cut(s) 319, 333, 364
BcoDI GTCTC 2 cut(s) 183, 741
BfaI CTAG 1 cut(s) 26
BfoI RGCGCY 1 cut(s) 644
BfuAI ACCTGC 1 cut(s) 867
BglI GCCNNNNNGGC 1 cut(s) 819
BisI GCNGC 5 cut(s) 79, 378, 476, 820, 989
BlsI GCNGC 5 cut(s) 80, 379, 477, 821, 990
Bme1390I CCNGG 5 cut(s) 210, 319, 333, 364, 854
Bme18I GGWCC 3 cut(s) 850, 856, 1100
BmeT110I CYCGRG 1 cut(s) 650
BmgT120I GGNCC 4 cut(s) 821, 850, 856, 1100
BmiI GGNNCC 3 cut(s) 361, 642, 721
BmrFI CCNGG 5 cut(s) 210, 319, 333, 364, 854
BmsI GCATC 1 cut(s) 103
BpuMI CCSGG 3 cut(s) 319, 333, 364
BsaHI GRCGYC 2 cut(s) 61, 641
BsaJI CCNNGG 7 cut(s) 208, 318, 331, 539, 688, 992, 1176
Bsc4I CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
Bse118I RCCGGY 2 cut(s) 380, 862
Bse1I ACTGG 1 cut(s) 721
Bse21I CCTNAGG 1 cut(s) 1002
BseBI CCWGG 2 cut(s) 210, 854
BseDI CCNNGG 7 cut(s) 208, 318, 331, 539, 688, 992, 1176
BseGI GGATG 4 cut(s) 328, 514, 549, 1253
BseLI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
BseMII CTCAG 2 cut(s) 752, 1016
BseNI ACTGG 1 cut(s) 721
BseRI GAGGAG 6 cut(s) 176, 179, 256, 259, 262, 563
BseXI GCAGC 3 cut(s) 65, 487, 975
BseYI CCCAGC 2 cut(s) 553, 1118
Bsh1236I CGCG 3 cut(s) 237, 690, 819
Bsh1285I CGRYCG 1 cut(s) 418
BshFI GGCC 2 cut(s) 104, 822
BshNI GGYRCC 2 cut(s) 640, 719
BsiEI CGRYCG 1 cut(s) 418
BsiHKCI CYCGRG 1 cut(s) 650
BsiSI CCGG 5 cut(s) 318, 333, 364, 381, 863
BslFI GGGAC 2 cut(s) 405, 1135
BslI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
BsmAI GTCTC 2 cut(s) 183, 741
BsmFI GGGAC 2 cut(s) 405, 1135
BsnI GGCC 2 cut(s) 104, 822
BsoBI CYCGRG 1 cut(s) 650
Bsp1286I GDGCHC 1 cut(s) 362
Bsp1407I TGTACA 1 cut(s) 183
Bsp143I GATC 3 cut(s) 415, 595, 1267
BspANI GGCC 2 cut(s) 104, 822
BspCNI CTCAG 2 cut(s) 751, 1015
BspFNI CGCG 3 cut(s) 237, 690, 819
BspLI GGNNCC 3 cut(s) 361, 642, 721
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 2 cut(s) 590, 1262
BspT107I GGYRCC 2 cut(s) 640, 719
BsrFI RCCGGY 2 cut(s) 380, 862
BsrGI TGTACA 1 cut(s) 183
BsrI ACTGG 1 cut(s) 721
BssAI RCCGGY 2 cut(s) 380, 862
BssECI CCNNGG 7 cut(s) 208, 318, 331, 539, 688, 992, 1176
BssMI GATC 3 cut(s) 415, 595, 1267
BssNI GRCGYC 2 cut(s) 61, 641
BssSI CACGAG 1 cut(s) 480
BssT1I CCWWGG 2 cut(s) 992, 1176
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 2 cut(s) 210, 854
Bst4CI ACNGT 1 cut(s) 567
Bst6I CTCTTC 1 cut(s) 128
BstACI GRCGYC 2 cut(s) 61, 641
BstAUI TGTACA 1 cut(s) 183
BstC8I GCNNGC 3 cut(s) 40, 382, 864
BstDEI CTNAG 5 cut(s) 123, 171, 738, 943, 1002
BstDSI CCRYGG 2 cut(s) 539, 688
BstF5I GGATG 4 cut(s) 328, 514, 549, 1253
BstFNI CGCG 3 cut(s) 237, 690, 819
BstH2I RGCGCY 1 cut(s) 644
BstHHI GCGC 3 cut(s) 239, 398, 643
BstKTI GATC 3 cut(s) 418, 598, 1270
BstMAI GTCTC 2 cut(s) 183, 741
BstMBI GATC 3 cut(s) 415, 595, 1267
BstMCI CGRYCG 1 cut(s) 418
BstMWI GCNNNNNNNGC 4 cut(s) 35, 67, 819, 997
BstNI CCWGG 2 cut(s) 210, 854
BstNSI RCATGY 1 cut(s) 446
BstSCI CCNGG 5 cut(s) 208, 317, 331, 362, 852
BstUI CGCG 3 cut(s) 237, 690, 819
BstV1I GCAGC 3 cut(s) 65, 487, 975
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 2 cut(s) 104, 822
BtgI CCRYGG 2 cut(s) 539, 688
BtsCI GGATG 4 cut(s) 328, 514, 549, 1253
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 3 cut(s) 40, 382, 864
CaiI CAGNNNCTG 1 cut(s) 716
CfoI GCGC 3 cut(s) 239, 398, 643
Cfr10I RCCGGY 2 cut(s) 380, 862
Cfr13I GGNCC 4 cut(s) 821, 850, 856, 1100
Cfr42I CCGCGG 1 cut(s) 691
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 2 cut(s) 112, 184
CviAII CATG 5 cut(s) 385, 443, 674, 1147, 1219
CviQI GTAC 2 cut(s) 112, 184
DdeI CTNAG 5 cut(s) 123, 171, 738, 943, 1002
DinI GGCGCC 1 cut(s) 642
DpnI GATC 3 cut(s) 417, 597, 1269
DpnII GATC 3 cut(s) 415, 595, 1267
DraIII CACNNNGTG 1 cut(s) 1139
Eam1104I CTCTTC 1 cut(s) 128
EarI CTCTTC 1 cut(s) 128
Eco130I CCWWGG 2 cut(s) 992, 1176
Eco24I GRGCYC 1 cut(s) 362
Eco32I GATATC 1 cut(s) 1171
Eco47I GGWCC 3 cut(s) 850, 856, 1100
Eco57I CTGAAG 2 cut(s) 170, 1293
Eco81I CCTNAGG 1 cut(s) 1002
Eco88I CYCGRG 1 cut(s) 650
EcoO109I RGGNCCY 1 cut(s) 1100
EcoRII CCWGG 2 cut(s) 208, 852
EcoRV GATATC 1 cut(s) 1171
EcoT14I CCWWGG 2 cut(s) 992, 1176
EcoT38I GRGCYC 1 cut(s) 362
EgeI GGCGCC 1 cut(s) 642
EheI GGCGCC 1 cut(s) 642
ErhI CCWWGG 2 cut(s) 992, 1176
FaeI CATG 5 cut(s) 388, 446, 677, 1150, 1222
FalI AAGNNNNNCTT 2 cut(s) 918, 950
FaqI GGGAC 2 cut(s) 405, 1135
FatI CATG 5 cut(s) 384, 442, 673, 1146, 1218
FauI CCCGC 2 cut(s) 610, 859
FauNDI CATATG 2 cut(s) 188, 1279
FblI GTMKAC 1 cut(s) 1182
Fnu4HI GCNGC 5 cut(s) 79, 378, 476, 820, 989
FokI GGATG 4 cut(s) 335, 521, 556, 1240
FriOI GRGCYC 1 cut(s) 362
Fsp4HI GCNGC 5 cut(s) 79, 378, 476, 820, 989
FspBI CTAG 1 cut(s) 26
GlaI GCGC 3 cut(s) 238, 397, 642
GluI GCNGC 5 cut(s) 79, 378, 476, 820, 989
GsaI CCCAGC 2 cut(s) 557, 1122
HaeII RGCGCY 1 cut(s) 644
HaeIII GGCC 2 cut(s) 104, 822
HapII CCGG 5 cut(s) 318, 333, 364, 381, 863
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 3 cut(s) 239, 398, 643
Hin1I GRCGYC 2 cut(s) 61, 641
Hin1II CATG 5 cut(s) 388, 446, 677, 1150, 1222
Hin6I GCGC 3 cut(s) 237, 396, 641
HinP1I GCGC 3 cut(s) 237, 396, 641
HincII GTYRAC 1 cut(s) 1183
HindII GTYRAC 1 cut(s) 1183
HindIII AAGCTT 1 cut(s) 843
HinfI GANTC 2 cut(s) 959, 1123
HpaII CCGG 5 cut(s) 318, 333, 364, 381, 863
HphI GGTGA 3 cut(s) 767, 989, 1165
Hpy166II GTNNAC 3 cut(s) 86, 539, 1183
Hpy188I TCNGA 3 cut(s) 253, 277, 1053
Hpy188III TCNNGA 7 cut(s) 422, 482, 740, 956, 1004, 1265, 1271
Hpy8I GTNNAC 3 cut(s) 86, 539, 1183
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 50, 417
HpyCH4III ACNGT 1 cut(s) 567
HpyCH4IV ACGT 1 cut(s) 670
HpyCH4V TGCA 3 cut(s) 572, 710, 1019
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 67, 819, 997
HpyF3I CTNAG 5 cut(s) 123, 171, 738, 943, 1002
HpySE526I ACGT 1 cut(s) 670
Hsp92I GRCGYC 2 cut(s) 61, 641
Hsp92II CATG 5 cut(s) 388, 446, 677, 1150, 1222
HspAI GCGC 3 cut(s) 237, 396, 641
KasI GGCGCC 1 cut(s) 640
KroI GCCGGC 2 cut(s) 380, 862
KroNI GCCGGC 2 cut(s) 382, 864
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 3 cut(s) 415, 595, 1267
LmnI GCTCC 2 cut(s) 365, 550
Lsp1109I GCAGC 3 cut(s) 65, 487, 975
LweI GCATC 1 cut(s) 103
MaeI CTAG 1 cut(s) 26
MaeII ACGT 1 cut(s) 670
MaeIII GTNAC 2 cut(s) 191, 712
MalI GATC 3 cut(s) 417, 597, 1269
MboI GATC 3 cut(s) 415, 595, 1267
MhlI GDGCHC 1 cut(s) 362
MluCI AATT 8 cut(s) 293, 495, 1013, 1076, 1157, 1198, 1214, 1238
Mly113I GGCGCC 1 cut(s) 641
MlyI GAGTC 1 cut(s) 1117
MroNI GCCGGC 2 cut(s) 380, 862
MseI TTAA 2 cut(s) 984, 1110
MslI CAYNNNNRTG 3 cut(s) 441, 447, 725
MspA1I CMGCKG 2 cut(s) 42, 690
MspI CCGG 5 cut(s) 318, 333, 364, 381, 863
MspR9I CCNGG 5 cut(s) 210, 319, 333, 364, 854
MvaI CCWGG 2 cut(s) 210, 854
MvnI CGCG 3 cut(s) 237, 690, 819
MwoI GCNNNNNNNGC 4 cut(s) 35, 67, 819, 997
NaeI GCCGGC 2 cut(s) 382, 864
NarI GGCGCC 1 cut(s) 641
NciI CCSGG 3 cut(s) 319, 333, 364
NdeI CATATG 2 cut(s) 188, 1279
NdeII GATC 3 cut(s) 415, 595, 1267
NgoMIV GCCGGC 2 cut(s) 380, 862
NlaIII CATG 5 cut(s) 388, 446, 677, 1150, 1222
NlaIV GGNNCC 3 cut(s) 361, 642, 721
NmuCI GTSAC 1 cut(s) 191
NspI RCATGY 1 cut(s) 446
PciI ACATGT 1 cut(s) 442
PcsI WCGNNNNNNNCGW 3 cut(s) 79, 420, 1188
PdiI GCCGGC 2 cut(s) 382, 864
PfeI GAWTC 1 cut(s) 959
PfoI TCCNGGA 2 cut(s) 362, 852
PkrI GCNGC 5 cut(s) 80, 379, 477, 821, 990
Ple19I CGATCG 1 cut(s) 418
PleI GAGTC 1 cut(s) 1117
PluTI GGCGCC 1 cut(s) 644
PpsI GAGTC 1 cut(s) 1117
PpuMI RGGWCCY 1 cut(s) 1100
PscI ACATGT 1 cut(s) 442
PsiI TTATAA 2 cut(s) 312, 1092
Psp5II RGGWCCY 1 cut(s) 1100
Psp6I CCWGG 2 cut(s) 208, 852
PspFI CCCAGC 2 cut(s) 553, 1118
PspGI CCWGG 2 cut(s) 208, 852
PspN4I GGNNCC 3 cut(s) 361, 642, 721
PspPI GGNCC 4 cut(s) 821, 850, 856, 1100
PspPPI RGGWCCY 1 cut(s) 1100
PstNI CAGNNNCTG 1 cut(s) 716
PvuI CGATCG 1 cut(s) 418
RsaI GTAC 2 cut(s) 113, 185
RsaNI GTAC 2 cut(s) 112, 184
RseI CAYNNNNRTG 3 cut(s) 441, 447, 725
SacII CCGCGG 1 cut(s) 691
SalI GTCGAC 1 cut(s) 1181
SaqAI TTAA 2 cut(s) 984, 1110
SatI GCNGC 5 cut(s) 79, 378, 476, 820, 989
Sau3AI GATC 3 cut(s) 415, 595, 1267
Sau96I GGNCC 4 cut(s) 821, 850, 856, 1100
SchI GAGTC 1 cut(s) 1117
ScrFI CCNGG 5 cut(s) 210, 319, 333, 364, 854
SduI GDGCHC 1 cut(s) 362
SfaNI GCATC 1 cut(s) 103
SfoI GGCGCC 1 cut(s) 642
Sfr303I CCGCGG 1 cut(s) 691
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 3 cut(s) 850, 856, 1100
SmiMI CAYNNNNRTG 3 cut(s) 441, 447, 725
Sse9I AATT 8 cut(s) 293, 495, 1013, 1076, 1157, 1198, 1214, 1238
SspDI GGCGCC 1 cut(s) 640
SspMI CTAG 1 cut(s) 26
StyD4I CCNGG 5 cut(s) 208, 317, 331, 362, 852
StyI CCWWGG 2 cut(s) 992, 1176
TaaI ACNGT 1 cut(s) 567
TaiI ACGT 1 cut(s) 673
TaqI TCGA 5 cut(s) 73, 414, 618, 765, 1182
TasI AATT 8 cut(s) 293, 495, 1013, 1076, 1157, 1198, 1214, 1238
TatI WGTACW 2 cut(s) 111, 183
TauI GCSGC 2 cut(s) 380, 822
TfiI GAWTC 1 cut(s) 959
Tru1I TTAA 2 cut(s) 984, 1110
Tru9I TTAA 2 cut(s) 984, 1110
TseFI GTSAC 1 cut(s) 191
TseI GCWGC 3 cut(s) 78, 475, 988
Tsp45I GTSAC 1 cut(s) 191
TspDTI ATGAA 7 cut(s) 339, 399, 401, 567, 1026, 1028, 1207
TspGWI ACGGA 1 cut(s) 556
VpaK11BI GGWCC 3 cut(s) 850, 856, 1100
XapI RAATTY 2 cut(s) 1013, 1238
XceI RCATGY 1 cut(s) 446
XcmI CCANNNNNNNNNTGG 1 cut(s) 786
XmiI GTMKAC 1 cut(s) 1182
XspI CTAG 1 cut(s) 26
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.