Rh7DG375300

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr7D
OG0000213
Physical Location & Seq
Reverse (-)
50961982 .. 50964021
2040 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh7DG375300.1

Sequence Viewer

Length: 1275 bp
ATGTCGCCCAAAACCGCTCTCAACCTAGCCAACAGAGCCAGCAATGGCGAAGCAGAAGGGCGTCATCGGCTTCGACGCGGCCGTGAACCACCGGCCGATAAGTACAGGAGGTCTAAGAAGAAGAAAAGAAGTCAGAAGTTGAAGTTGAACGAGGAGGAGGCTAAGAAGTCTCTGTACATATGTCACATTGAACACCACCCTGGAAAGTGGGTTGCTTATGTCGTCCGCGCCATCAAGTTGTCCGATTTGTTATCCTCCTCCTCCGATGATGATGATGATTTGAAATTACGGCAAGTGGGTTATAAAGCCGGGGATGAACTCCCCGGTTCTGTGGGTTGCGGTGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGCCCGTATGCCTTCATTCGATCGTCCCGACATAGTTTGGCATAGACATGTTTATGCCTTTGAAACTGACCCCAACAAGCAGCCTCGTGATAATAGTAGAATTACCAGGGTGGATGGCACATTAGTTGAAGCCAAGTTTCGTCCACGGATGGAGGAGCTGGGGGGCAAACTGTATGCACTTTCATATAGGCTGGTGGCTGATCCTCCCGCATTTGAGGTATTCGACCCGAAAGTGGGGAGTTGGGCGCCCCTGCCACAGCCTCCATTCTTCAAACGTCATGGTCAGTATAACCGCGGTGGCAACCTCTCTTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGGAGAGATGTCCTGTGTTCTGTTTCGATGTAGCTCACCCAGACAGAGAATGGAGACTAGTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGGAAACAAAGCTTTGGTTCTAGACCTGCCGGCTGATGACAAGAAGAAGATAATGTTTGCCTATACTATGGGTCGTTGGTATCTACGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCTATCACACCGATTGGTGATTTTAAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCAAAAAGATGTTATTTTGTTCATATAGGAGGTCAGAAAGCCTGCATTATTGCCCCCGAATTGGTTATGCCTTATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACGGGGTGTTGCCATGCCATTTCAATTTGAAGTTGATATCACCAAGGACGAGAAGAATTGTTTGACCCTCCAATTCATGCCTACTCGTATCTTCAAATTCTATACCAACCCATCCACTTTTCCTGATCCTGAAGCATATGGTTGCTTTGTGCTGTAA

Protein Analysis

424

Amino Acids

48.52

Weight (kDa)

9.31

Isoelectric Point (pI)

49.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 170 - 264 8.7e-10 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 303, 1077
Acc36I ACCTGC 1 cut(s) 858
AccB1I GGYRCC 2 cut(s) 631, 710
AccBSI CCGCTC 1 cut(s) 17
AccII CGCG 4 cut(s) 78, 228, 681, 810
AciI CCGC 9 cut(s) 15, 78, 226, 339, 369, 594, 679, 681, 810
AclWI GGATC 2 cut(s) 581, 1238
AcoI YGGCCR 2 cut(s) 79, 93
AcsI RAATTY 2 cut(s) 998, 1214
AcuI CTGAAG 1 cut(s) 1269
AcyI GRCGYC 2 cut(s) 61, 632
AdeI CACNNNGTG 1 cut(s) 1124
AfaI GTAC 2 cut(s) 104, 176
AfiI CCNNNNNNNGG 3 cut(s) 619, 620, 1063
AflIII ACRYGT 1 cut(s) 433
AhlI ACTAGT 1 cut(s) 787
AjnI CCWGG 2 cut(s) 199, 491
AluBI AGCT 4 cut(s) 544, 764, 836, 973
AluI AGCT 4 cut(s) 544, 764, 836, 973
Alw26I GTCTC 4 cut(s) 174, 732, 778, 796
AlwI GGATC 2 cut(s) 581, 1238
AlwNI CAGNNNCTG 1 cut(s) 707
AoxI GGCC 3 cut(s) 79, 93, 811
ApeKI GCWGC 2 cut(s) 466, 973
ApoI RAATTY 2 cut(s) 998, 1214
AspLEI GCGC 3 cut(s) 230, 389, 634
AspS9I GGNCC 2 cut(s) 812, 1085
AsuC2I CCSGG 3 cut(s) 310, 324, 355
AsuHPI GGTGA 3 cut(s) 758, 974, 1150
AvaII GGWCC 1 cut(s) 1085
AxyI CCTNAGG 1 cut(s) 987
BanI GGYRCC 2 cut(s) 631, 710
BanII GRGCYC 1 cut(s) 353
BarI GAAGNNNNNNTAC 2 cut(s) 158, 190
BauI CACGAG 1 cut(s) 471
BbvI GCAGC 2 cut(s) 478, 960
BccI CCATC 4 cut(s) 239, 494, 529, 1237
BceAI ACGGC 2 cut(s) 66, 305
BciT130I CCWGG 2 cut(s) 201, 493
BcnI CCSGG 3 cut(s) 310, 324, 355
BcoDI GTCTC 4 cut(s) 174, 732, 778, 796
BcuI ACTAGT 1 cut(s) 787
BfaI CTAG 3 cut(s) 26, 788, 845
BfoI RGCGCY 1 cut(s) 635
BfuAI ACCTGC 1 cut(s) 858
BglI GCCNNNNNGGC 1 cut(s) 810
BisI GCNGC 5 cut(s) 79, 369, 467, 811, 974
BlsI GCNGC 5 cut(s) 80, 370, 468, 812, 975
Bme1390I CCNGG 5 cut(s) 201, 310, 324, 355, 493
Bme18I GGWCC 1 cut(s) 1085
BmgT120I GGNCC 2 cut(s) 812, 1085
BmiI GGNNCC 3 cut(s) 352, 633, 712
BmrFI CCNGG 5 cut(s) 201, 310, 324, 355, 493
BpuMI CCSGG 3 cut(s) 310, 324, 355
BsaHI GRCGYC 2 cut(s) 61, 632
BsaJI CCNNGG 9 cut(s) 199, 309, 322, 492, 530, 679, 927, 977, 1161
Bsc4I CCNNNNNNNGG 3 cut(s) 619, 620, 1063
Bse118I RCCGGY 3 cut(s) 91, 371, 853
Bse1I ACTGG 1 cut(s) 712
Bse21I CCTNAGG 1 cut(s) 987
Bse3DI GCAATG 1 cut(s) 49
BseBI CCWGG 2 cut(s) 201, 493
BseDI CCNNGG 9 cut(s) 199, 309, 322, 492, 530, 679, 927, 977, 1161
BseGI GGATG 4 cut(s) 319, 505, 540, 1229
BseLI CCNNNNNNNGG 3 cut(s) 619, 620, 1063
BseMI GCAATG 1 cut(s) 49
BseMII CTCAG 2 cut(s) 743, 1001
BseNI ACTGG 1 cut(s) 712
BseRI GAGGAG 5 cut(s) 167, 170, 247, 250, 554
BseX3I CGGCCG 2 cut(s) 79, 93
BseXI GCAGC 2 cut(s) 478, 960
BseYI CCCAGC 2 cut(s) 544, 1103
Bsh1236I CGCG 4 cut(s) 78, 228, 681, 810
Bsh1285I CGRYCG 3 cut(s) 82, 96, 409
BshFI GGCC 3 cut(s) 81, 95, 813
BshNI GGYRCC 2 cut(s) 631, 710
BsiEI CGRYCG 3 cut(s) 82, 96, 409
BsiSI CCGG 6 cut(s) 92, 309, 324, 355, 372, 854
BslFI GGGAC 2 cut(s) 396, 1120
BslI CCNNNNNNNGG 3 cut(s) 619, 620, 1063
BsmAI GTCTC 4 cut(s) 174, 732, 778, 796
BsmFI GGGAC 2 cut(s) 396, 1120
BsnI GGCC 3 cut(s) 81, 95, 813
Bsp1286I GDGCHC 1 cut(s) 353
Bsp1407I TGTACA 1 cut(s) 174
Bsp143I GATC 3 cut(s) 406, 586, 1243
BspACI CCGC 9 cut(s) 15, 78, 226, 339, 369, 594, 679, 681, 810
BspANI GGCC 3 cut(s) 81, 95, 813
BspCNI CTCAG 2 cut(s) 742, 1000
BspFNI CGCG 4 cut(s) 78, 228, 681, 810
BspLI GGNNCC 3 cut(s) 352, 633, 712
BspMI ACCTGC 1 cut(s) 858
BspPI GGATC 2 cut(s) 581, 1238
BspT107I GGYRCC 2 cut(s) 631, 710
BsrBI CCGCTC 1 cut(s) 17
BsrDI GCAATG 1 cut(s) 49
BsrFI RCCGGY 3 cut(s) 91, 371, 853
BsrGI TGTACA 1 cut(s) 174
BsrI ACTGG 1 cut(s) 712
BssAI RCCGGY 3 cut(s) 91, 371, 853
BssECI CCNNGG 9 cut(s) 199, 309, 322, 492, 530, 679, 927, 977, 1161
BssMI GATC 3 cut(s) 406, 586, 1243
BssNI GRCGYC 2 cut(s) 61, 632
BssSI CACGAG 1 cut(s) 471
BssT1I CCWWGG 3 cut(s) 927, 977, 1161
Bst2BI CACGAG 1 cut(s) 471
Bst2UI CCWGG 2 cut(s) 201, 493
Bst4CI ACNGT 1 cut(s) 558
Bst6I CTCTTC 1 cut(s) 799
BstACI GRCGYC 2 cut(s) 61, 632
BstAUI TGTACA 1 cut(s) 174
BstC8I GCNNGC 4 cut(s) 40, 373, 855, 1045
BstDEI CTNAG 4 cut(s) 114, 162, 729, 987
BstDSI CCRYGG 2 cut(s) 530, 679
BstF5I GGATG 4 cut(s) 319, 505, 540, 1229
BstFNI CGCG 4 cut(s) 78, 228, 681, 810
BstH2I RGCGCY 1 cut(s) 635
BstHHI GCGC 3 cut(s) 230, 389, 634
BstKTI GATC 3 cut(s) 409, 589, 1246
BstMAI GTCTC 4 cut(s) 174, 732, 778, 796
BstMBI GATC 3 cut(s) 406, 586, 1243
BstMCI CGRYCG 3 cut(s) 82, 96, 409
BstMWI GCNNNNNNNGC 4 cut(s) 35, 67, 810, 982
BstNI CCWGG 2 cut(s) 201, 493
BstNSI RCATGY 1 cut(s) 437
BstSCI CCNGG 5 cut(s) 199, 308, 322, 353, 491
BstUI CGCG 4 cut(s) 78, 228, 681, 810
BstV1I GCAGC 2 cut(s) 478, 960
BstZI CGGCCG 2 cut(s) 79, 93
Bsu36I CCTNAGG 1 cut(s) 987
BsuRI GGCC 3 cut(s) 81, 95, 813
BtgI CCRYGG 2 cut(s) 530, 679
BtsCI GGATG 4 cut(s) 319, 505, 540, 1229
BveI ACCTGC 1 cut(s) 858
Cac8I GCNNGC 4 cut(s) 40, 373, 855, 1045
CaiI CAGNNNCTG 1 cut(s) 707
CfoI GCGC 3 cut(s) 230, 389, 634
Cfr10I RCCGGY 3 cut(s) 91, 371, 853
Cfr13I GGNCC 2 cut(s) 812, 1085
Cfr42I CCGCGG 1 cut(s) 682
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 2 cut(s) 103, 175
CviAII CATG 5 cut(s) 376, 434, 665, 1132, 1195
CviQI GTAC 2 cut(s) 103, 175
DdeI CTNAG 4 cut(s) 114, 162, 729, 987
DinI GGCGCC 1 cut(s) 633
DpnI GATC 3 cut(s) 408, 588, 1245
DpnII GATC 3 cut(s) 406, 586, 1243
DraIII CACNNNGTG 1 cut(s) 1124
EaeI YGGCCR 2 cut(s) 79, 93
EagI CGGCCG 2 cut(s) 79, 93
Eam1104I CTCTTC 1 cut(s) 799
EarI CTCTTC 1 cut(s) 799
EclXI CGGCCG 2 cut(s) 79, 93
Eco130I CCWWGG 3 cut(s) 927, 977, 1161
Eco24I GRGCYC 1 cut(s) 353
Eco32I GATATC 1 cut(s) 1156
Eco47I GGWCC 1 cut(s) 1085
Eco52I CGGCCG 2 cut(s) 79, 93
Eco57I CTGAAG 1 cut(s) 1269
Eco81I CCTNAGG 1 cut(s) 987
EcoO109I RGGNCCY 1 cut(s) 1085
EcoRII CCWGG 2 cut(s) 199, 491
EcoRV GATATC 1 cut(s) 1156
EcoT14I CCWWGG 3 cut(s) 927, 977, 1161
EcoT38I GRGCYC 1 cut(s) 353
EgeI GGCGCC 1 cut(s) 633
EheI GGCGCC 1 cut(s) 633
ErhI CCWWGG 3 cut(s) 927, 977, 1161
FaeI CATG 5 cut(s) 379, 437, 668, 1135, 1198
FaqI GGGAC 2 cut(s) 396, 1120
FatI CATG 5 cut(s) 375, 433, 664, 1131, 1194
FauI CCCGC 1 cut(s) 601
FauNDI CATATG 2 cut(s) 179, 1255
Fnu4HI GCNGC 5 cut(s) 79, 369, 467, 811, 974
FokI GGATG 4 cut(s) 326, 512, 547, 1216
FriOI GRGCYC 1 cut(s) 353
Fsp4HI GCNGC 5 cut(s) 79, 369, 467, 811, 974
FspBI CTAG 3 cut(s) 26, 788, 845
GlaI GCGC 3 cut(s) 229, 388, 633
GluI GCNGC 5 cut(s) 79, 369, 467, 811, 974
GsaI CCCAGC 2 cut(s) 548, 1107
HaeII RGCGCY 1 cut(s) 635
HaeIII GGCC 3 cut(s) 81, 95, 813
HapII CCGG 6 cut(s) 92, 309, 324, 355, 372, 854
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 3 cut(s) 230, 389, 634
Hin1I GRCGYC 2 cut(s) 61, 632
Hin1II CATG 5 cut(s) 379, 437, 668, 1135, 1198
Hin6I GCGC 3 cut(s) 228, 387, 632
HinP1I GCGC 3 cut(s) 228, 387, 632
HindIII AAGCTT 1 cut(s) 834
HinfI GANTC 2 cut(s) 944, 1108
HpaII CCGG 6 cut(s) 92, 309, 324, 355, 372, 854
HphI GGTGA 3 cut(s) 758, 974, 1150
Hpy166II GTNNAC 2 cut(s) 86, 530
Hpy188I TCNGA 4 cut(s) 135, 244, 265, 1038
Hpy188III TCNNGA 8 cut(s) 413, 473, 731, 845, 941, 989, 1241, 1247
Hpy8I GTNNAC 2 cut(s) 86, 530
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 2 cut(s) 50, 408
HpyCH4III ACNGT 1 cut(s) 558
HpyCH4IV ACGT 1 cut(s) 661
HpyCH4V TGCA 4 cut(s) 563, 701, 1004, 1047
HpyF10VI GCNNNNNNNGC 4 cut(s) 35, 67, 810, 982
HpyF3I CTNAG 4 cut(s) 114, 162, 729, 987
HpySE526I ACGT 1 cut(s) 661
Hsp92I GRCGYC 2 cut(s) 61, 632
Hsp92II CATG 5 cut(s) 379, 437, 668, 1135, 1198
HspAI GCGC 3 cut(s) 228, 387, 632
KasI GGCGCC 1 cut(s) 631
KroI GCCGGC 2 cut(s) 371, 853
KroNI GCCGGC 2 cut(s) 373, 855
KspI CCGCGG 1 cut(s) 682
Kzo9I GATC 3 cut(s) 406, 586, 1243
LmnI GCTCC 2 cut(s) 356, 541
Lsp1109I GCAGC 2 cut(s) 478, 960
MaeI CTAG 3 cut(s) 26, 788, 845
MaeII ACGT 1 cut(s) 661
MaeIII GTNAC 2 cut(s) 182, 703
MalI GATC 3 cut(s) 408, 588, 1245
MbiI CCGCTC 1 cut(s) 17
MboI GATC 3 cut(s) 406, 586, 1243
MboII GAAGA 9 cut(s) 130, 133, 646, 786, 880, 883, 944, 1183, 1201
MhlI GDGCHC 1 cut(s) 353
MluCI AATT 8 cut(s) 284, 486, 998, 1061, 1142, 1174, 1190, 1214
Mly113I GGCGCC 1 cut(s) 632
MlyI GAGTC 1 cut(s) 1102
MroNI GCCGGC 2 cut(s) 371, 853
MseI TTAA 2 cut(s) 969, 1095
MslI CAYNNNNRTG 3 cut(s) 432, 438, 716
MspA1I CMGCKG 1 cut(s) 681
MspI CCGG 6 cut(s) 92, 309, 324, 355, 372, 854
MspR9I CCNGG 5 cut(s) 201, 310, 324, 355, 493
MvaI CCWGG 2 cut(s) 201, 493
MvnI CGCG 4 cut(s) 78, 228, 681, 810
MwoI GCNNNNNNNGC 4 cut(s) 35, 67, 810, 982
NaeI GCCGGC 2 cut(s) 373, 855
NarI GGCGCC 1 cut(s) 632
NciI CCSGG 3 cut(s) 310, 324, 355
NdeI CATATG 2 cut(s) 179, 1255
NdeII GATC 3 cut(s) 406, 586, 1243
NgoMIV GCCGGC 2 cut(s) 371, 853
NlaIII CATG 5 cut(s) 379, 437, 668, 1135, 1198
NlaIV GGNNCC 3 cut(s) 352, 633, 712
NmuCI GTSAC 1 cut(s) 182
NspI RCATGY 1 cut(s) 437
PciI ACATGT 1 cut(s) 433
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 411
PdiI GCCGGC 2 cut(s) 373, 855
PfeI GAWTC 1 cut(s) 944
PfoI TCCNGGA 1 cut(s) 353
PkrI GCNGC 5 cut(s) 80, 370, 468, 812, 975
Ple19I CGATCG 1 cut(s) 409
PleI GAGTC 1 cut(s) 1102
PluTI GGCGCC 1 cut(s) 635
PpsI GAGTC 1 cut(s) 1102
PpuMI RGGWCCY 1 cut(s) 1085
PscI ACATGT 1 cut(s) 433
PsiI TTATAA 2 cut(s) 303, 1077
Psp5II RGGWCCY 1 cut(s) 1085
Psp6I CCWGG 2 cut(s) 199, 491
PspFI CCCAGC 2 cut(s) 544, 1103
PspGI CCWGG 2 cut(s) 199, 491
PspN4I GGNNCC 3 cut(s) 352, 633, 712
PspPI GGNCC 2 cut(s) 812, 1085
PspPPI RGGWCCY 1 cut(s) 1085
PstNI CAGNNNCTG 1 cut(s) 707
PvuI CGATCG 1 cut(s) 409
RsaI GTAC 2 cut(s) 104, 176
RsaNI GTAC 2 cut(s) 103, 175
RseI CAYNNNNRTG 3 cut(s) 432, 438, 716
SacII CCGCGG 1 cut(s) 682
SaqAI TTAA 2 cut(s) 969, 1095
SatI GCNGC 5 cut(s) 79, 369, 467, 811, 974
Sau3AI GATC 3 cut(s) 406, 586, 1243
Sau96I GGNCC 2 cut(s) 812, 1085
SchI GAGTC 1 cut(s) 1102
ScrFI CCNGG 5 cut(s) 201, 310, 324, 355, 493
SduI GDGCHC 1 cut(s) 353
SfoI GGCGCC 1 cut(s) 633
Sfr303I CCGCGG 1 cut(s) 682
SgrBI CCGCGG 1 cut(s) 682
SinI GGWCC 1 cut(s) 1085
SmiMI CAYNNNNRTG 3 cut(s) 432, 438, 716
SpeI ACTAGT 1 cut(s) 787
Sse9I AATT 8 cut(s) 284, 486, 998, 1061, 1142, 1174, 1190, 1214
SsiI CCGC 9 cut(s) 15, 78, 226, 339, 369, 594, 679, 681, 810
SspDI GGCGCC 1 cut(s) 631
SspMI CTAG 3 cut(s) 26, 788, 845
StyD4I CCNGG 5 cut(s) 199, 308, 322, 353, 491
StyI CCWWGG 3 cut(s) 927, 977, 1161
TaaI ACNGT 1 cut(s) 558
TaiI ACGT 1 cut(s) 664
TaqI TCGA 4 cut(s) 73, 405, 609, 756
TasI AATT 8 cut(s) 284, 486, 998, 1061, 1142, 1174, 1190, 1214
TatI WGTACW 2 cut(s) 102, 174
TauI GCSGC 3 cut(s) 81, 371, 813
TfiI GAWTC 1 cut(s) 944
Tru1I TTAA 2 cut(s) 969, 1095
Tru9I TTAA 2 cut(s) 969, 1095
TseFI GTSAC 1 cut(s) 182
TseI GCWGC 2 cut(s) 466, 973
Tsp45I GTSAC 1 cut(s) 182
TspDTI ATGAA 7 cut(s) 330, 390, 392, 558, 1011, 1013, 1183
TspGWI ACGGA 1 cut(s) 547
VpaK11BI GGWCC 1 cut(s) 1085
XapI RAATTY 2 cut(s) 998, 1214
XbaI TCTAGA 1 cut(s) 844
XceI RCATGY 1 cut(s) 437
XcmI CCANNNNNNNNNTGG 1 cut(s) 777
XspI CTAG 3 cut(s) 26, 788, 845
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.