FvH4_1g03650

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000213
Physical Location & Seq
Reverse (-)
1978942 .. 1980522
1581 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g03650.t1

Sequence Viewer

Length: 1293 bp
ATGTCCGAAAAATCGTTAAACCCAGAAAGCTACGTTAAAGAAGAAGTAGAAGAAGAGCAAAGCCCGCGTCCGCATAAGCGTGTCAAGACAGGCACATGCAGCCTTGAATATGCTGATGATAAGTCTCTATTCCTTTGTAGCATGGAACGTTACTGGGACAGACCCAACTTTCGGCCCCCTCCGCCAAGGTATCCTCGTCAGCCTTGGGATTCTTCCTATGTTGTTCGCTCCATCAATCTTCCCGATCTGCTGACATCGTCGTCGTCGGAGAAACTAGAATTGCGGGAACTAGCGAGAATGGACGACAAAGATTTCCCAGGTAAAGATCTCCGGAGTAGAGTAGGTCTCCCAGGTAGAGTTGGTTGCGGTGTTTTGGGGTCCAAGTTTGTCATCGCCAGCGGCTTTAAACCCAACTTCGATCCGGATCGTTTCGGACCACCATACGGCCCTCATCCCAGCACAGATGCTTATGCCTTCGATGCCCATGACCCCAAACAAGGAATAGTCAAGATGCCGGGGGCTTTAAACGGAGGGAAACAAAGCCCGTTGATGGTTGAGTTTGCCGGCAAACTCTACGTTCTGTCATATAAGTGGGAAAGTGTCAAATCATTTGAGGTATTTGACCCCCAACAGGGTACTTGGTCAGTTCTGCCAAGCTACCCTGATGCTGCCTGCTGCTACCCTTATTCAACTGCATCTTATGTTATTGCAGGCACCAAATTGTTTATGTCTACCAGATTGGTTAAGCCTACCGCAGACTGCCCGATTTGCTGCTTTGATTTTGCGGCCCGAGACCCAGAATGGAGGAGAGTCCCCAGCTTGTGCCAAGGTGGCCCTTTACCAATTGCAGGCCAAGCTGTAGCGGTGGACATGCCTCAGCCAGAACACGGTAACAAAAAGTTACTGTTTTCGGCTAGACATTGCTACTCCCGTTGCAATATAGTAGTTCATCTTATGTCCTTGGATGAAAACCAGGAAACAATCAGTGAAATCTTTGAGATGAATCTGCCGGCTGAGCTCCCTCATCAACCATGGCCAAATGACTGTCATTTCTTCCATCTAGGGGGAAACAATGTCTTCCTTGTCACCACCGCTCGTGTTGGAGAACGCACAAACTCTGGGATTTATACGGGTGGTGCCGTACTGTTTCAATTCGAATTTGATATCTCCAAGGTGGACACGGACAGGAAGAATTGTTTCACTCTCCAATTCCAGCCTCCTCGCATTTTCGAATACCATTCCTCTCCAGACTGTATGTCACCGCCTGACACACTTGGTTGCTTTCTGCTGTAA

Protein Analysis

431

Amino Acids

48.37

Weight (kDa)

5.97

Isoelectric Point (pI)

48.15

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 166 - 360 6.2e-08 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 259
AccB1I GGYRCC 2 cut(s) 713, 1136
AccBSI CCGCTC 1 cut(s) 1094
AccI GTMKAC 1 cut(s) 731
AccII CGCG 1 cut(s) 67
AccIII TCCGGA 2 cut(s) 330, 421
AclI AACGTT 1 cut(s) 148
AclWI GGATC 2 cut(s) 413, 432
AcoI YGGCCR 1 cut(s) 1034
AcsI RAATTY 1 cut(s) 1157
AfaI GTAC 2 cut(s) 637, 1143
AfiI CCNNNNNNNGG 9 cut(s) 171, 443, 497, 550, 631, 632, 848, 887, 1063
AgsI TTSAA 3 cut(s) 107, 690, 1151
AhdI GACNNNNNGTC 1 cut(s) 1255
AjnI CCWGG 3 cut(s) 316, 349, 972
AluBI AGCT 5 cut(s) 30, 657, 819, 857, 1018
AluI AGCT 5 cut(s) 30, 657, 819, 857, 1018
Alw21I GWGCWC 1 cut(s) 1020
Alw26I GTCTC 3 cut(s) 129, 350, 786
AlwI GGATC 2 cut(s) 413, 432
Ama87I CYCGRG 1 cut(s) 789
Aor13HI TCCGGA 2 cut(s) 330, 421
AoxI GGCC 6 cut(s) 173, 445, 786, 832, 850, 1034
ApeKI GCWGC 4 cut(s) 99, 668, 675, 771
ApoI RAATTY 1 cut(s) 1157
ArsI GACNNNNNNTTYG 4 cut(s) 52, 84, 153, 185
Asp700I GAANNNNTTC 1 cut(s) 1196
AspS9I GGNCC 6 cut(s) 174, 378, 434, 446, 787, 833
AsuC2I CCSGG 1 cut(s) 516
AsuHPI GGTGA 2 cut(s) 1078, 1251
AsuII TTCGAA 2 cut(s) 1155, 1230
AvaI CYCGRG 1 cut(s) 789
AvaII GGWCC 2 cut(s) 378, 434
BalI TGGCCA 1 cut(s) 1036
BanI GGYRCC 2 cut(s) 713, 1136
BanII GRGCYC 1 cut(s) 1020
BauI CACGAG 1 cut(s) 1095
BbsI GAAGAC 1 cut(s) 1069
Bbv12I GWGCWC 1 cut(s) 1020
BbvCI CCTCAGC 1 cut(s) 876
BbvI GCAGC 4 cut(s) 111, 655, 662, 758
BccI CCATC 3 cut(s) 239, 544, 1065
BceAI ACGGC 2 cut(s) 460, 1124
BciT130I CCWGG 3 cut(s) 318, 351, 974
BciVI GTATCC 1 cut(s) 201
BcnI CCSGG 1 cut(s) 516
BcoDI GTCTC 3 cut(s) 129, 350, 786
BfaI CTAG 4 cut(s) 275, 290, 915, 1061
BfmI CTRYAG 1 cut(s) 858
BfuI GTATCC 1 cut(s) 201
BglI GCCNNNNNGGC 1 cut(s) 831
BglII AGATCT 1 cut(s) 325
BisI GCNGC 6 cut(s) 100, 400, 669, 676, 772, 786
BlpI GCTNAGC 1 cut(s) 1014
BlsI GCNGC 6 cut(s) 101, 401, 670, 677, 773, 787
Bme1390I CCNGG 4 cut(s) 318, 351, 516, 974
Bme18I GGWCC 2 cut(s) 378, 434
BmeRI GACNNNNNGTC 1 cut(s) 1255
BmeT110I CYCGRG 1 cut(s) 789
BmgT120I GGNCC 6 cut(s) 174, 378, 434, 446, 787, 833
BmiI GGNNCC 4 cut(s) 176, 379, 715, 1138
BmrFI CCNGG 4 cut(s) 318, 351, 516, 974
BmrI ACTGGG 1 cut(s) 163
BmsI GCATC 5 cut(s) 454, 469, 501, 655, 704
BmuI ACTGGG 1 cut(s) 163
BpiI GAAGAC 1 cut(s) 1069
BplI GAGNNNNNCTC 2 cut(s) 330, 362
BpmI CTGGAG 1 cut(s) 1230
Bpu10I CCTNAGC 1 cut(s) 876
Bpu1102I GCTNAGC 1 cut(s) 1014
Bpu14I TTCGAA 2 cut(s) 1155, 1230
BpuMI CCSGG 1 cut(s) 516
BsaBI GATNNNNATC 1 cut(s) 423
BsaI GGTCTC 2 cut(s) 350, 786
BsaJI CCNNGG 9 cut(s) 185, 203, 316, 349, 515, 826, 960, 1031, 1170
BsaWI WCCGGW 2 cut(s) 330, 421
Bsc4I CCNNNNNNNGG 9 cut(s) 171, 443, 497, 550, 631, 632, 848, 887, 1063
Bse118I RCCGGY 2 cut(s) 563, 1009
Bse1I ACTGG 1 cut(s) 158
Bse3DI GCAATG 1 cut(s) 919
Bse8I GATNNNNATC 1 cut(s) 423
BseAI TCCGGA 2 cut(s) 330, 421
BseBI CCWGG 3 cut(s) 318, 351, 974
BseDI CCNNGG 9 cut(s) 185, 203, 316, 349, 515, 826, 960, 1031, 1170
BseGI GGATG 2 cut(s) 451, 970
BseJI GATNNNNATC 1 cut(s) 423
BseLI CCNNNNNNNGG 9 cut(s) 171, 443, 497, 550, 631, 632, 848, 887, 1063
BseMI GCAATG 1 cut(s) 919
BseMII CTCAG 2 cut(s) 890, 1005
BseNI ACTGG 1 cut(s) 158
BseRI GAGGAG 2 cut(s) 820, 1209
BseXI GCAGC 4 cut(s) 111, 655, 662, 758
BseYI CCCAGC 2 cut(s) 455, 815
Bsh1236I CGCG 1 cut(s) 67
BshFI GGCC 6 cut(s) 175, 447, 788, 834, 852, 1036
BshNI GGYRCC 2 cut(s) 713, 1136
BsiHKAI GWGCWC 1 cut(s) 1020
BsiHKCI CYCGRG 1 cut(s) 789
BsiSI CCGG 5 cut(s) 331, 422, 515, 564, 1010
BslFI GGGAC 2 cut(s) 170, 797
BslI CCNNNNNNNGG 9 cut(s) 171, 443, 497, 550, 631, 632, 848, 887, 1063
BsmAI GTCTC 3 cut(s) 129, 350, 786
BsmFI GGGAC 2 cut(s) 170, 797
BsnI GGCC 6 cut(s) 175, 447, 788, 834, 852, 1036
Bso31I GGTCTC 2 cut(s) 350, 786
BsoBI CYCGRG 1 cut(s) 789
Bsp119I TTCGAA 2 cut(s) 1155, 1230
Bsp1286I GDGCHC 1 cut(s) 1020
Bsp13I TCCGGA 2 cut(s) 330, 421
Bsp143I GATC 4 cut(s) 244, 325, 418, 424
Bsp1720I GCTNAGC 1 cut(s) 1014
Bsp19I CCATGG 1 cut(s) 1031
BspANI GGCC 6 cut(s) 175, 447, 788, 834, 852, 1036
BspCNI CTCAG 2 cut(s) 889, 1006
BspEI TCCGGA 2 cut(s) 330, 421
BspFNI CGCG 1 cut(s) 67
BspLI GGNNCC 4 cut(s) 176, 379, 715, 1138
BspPI GGATC 2 cut(s) 413, 432
BspQI GCTCTTC 1 cut(s) 48
BspT104I TTCGAA 2 cut(s) 1155, 1230
BspT107I GGYRCC 2 cut(s) 713, 1136
BspTNI GGTCTC 2 cut(s) 350, 786
BsrBI CCGCTC 1 cut(s) 1094
BsrDI GCAATG 1 cut(s) 919
BsrFI RCCGGY 2 cut(s) 563, 1009
BsrI ACTGG 1 cut(s) 158
BssAI RCCGGY 2 cut(s) 563, 1009
BssECI CCNNGG 9 cut(s) 185, 203, 316, 349, 515, 826, 960, 1031, 1170
BssMI GATC 4 cut(s) 244, 325, 418, 424
BssSI CACGAG 1 cut(s) 1095
BssT1I CCWWGG 6 cut(s) 185, 203, 826, 960, 1031, 1170
Bst2BI CACGAG 1 cut(s) 1095
Bst2UI CCWGG 3 cut(s) 318, 351, 974
Bst4CI ACNGT 5 cut(s) 890, 906, 1046, 1146, 1253
Bst6I CTCTTC 1 cut(s) 48
BstBI TTCGAA 2 cut(s) 1155, 1230
BstC8I GCNNGC 7 cut(s) 65, 397, 565, 673, 712, 850, 1011
BstDEI CTNAG 2 cut(s) 876, 1014
BstDSI CCRYGG 1 cut(s) 1031
BstF5I GGATG 2 cut(s) 451, 970
BstFNI CGCG 1 cut(s) 67
BstKTI GATC 4 cut(s) 247, 328, 421, 427
BstMAI GTCTC 3 cut(s) 129, 350, 786
BstMBI GATC 4 cut(s) 244, 325, 418, 424
BstMWI GCNNNNNNNGC 8 cut(s) 64, 99, 181, 479, 768, 831, 854, 1015
BstNI CCWGG 3 cut(s) 318, 351, 974
BstNSI RCATGY 2 cut(s) 99, 874
BstSCI CCNGG 4 cut(s) 316, 349, 514, 972
BstSFI CTRYAG 1 cut(s) 858
BstUI CGCG 1 cut(s) 67
BstV1I GCAGC 4 cut(s) 111, 655, 662, 758
BstV2I GAAGAC 1 cut(s) 1069
BstX2I RGATCY 1 cut(s) 325
BstYI RGATCY 1 cut(s) 325
BsuI GTATCC 1 cut(s) 201
BsuRI GGCC 6 cut(s) 175, 447, 788, 834, 852, 1036
BtgI CCRYGG 1 cut(s) 1031
BtgZI GCGATG 1 cut(s) 376
BtsCI GGATG 2 cut(s) 451, 970
BtsIMutI CAGTG 1 cut(s) 991
Cac8I GCNNGC 7 cut(s) 65, 397, 565, 673, 712, 850, 1011
Cfr10I RCCGGY 2 cut(s) 563, 1009
Cfr13I GGNCC 6 cut(s) 174, 378, 434, 446, 787, 833
CseI GACGC 1 cut(s) 56
Csp6I GTAC 2 cut(s) 636, 1142
CviAII CATG 5 cut(s) 96, 142, 485, 871, 1032
CviQI GTAC 2 cut(s) 636, 1142
DdeI CTNAG 2 cut(s) 876, 1014
DpnI GATC 4 cut(s) 246, 327, 420, 426
DpnII GATC 4 cut(s) 244, 325, 418, 424
DraI TTTAAA 2 cut(s) 406, 525
DrdI GACNNNNNNGTC 1 cut(s) 259
DriI GACNNNNNGTC 1 cut(s) 1255
DseDI GACNNNNNNGTC 1 cut(s) 259
EaeI YGGCCR 1 cut(s) 1034
Eam1104I CTCTTC 1 cut(s) 48
Eam1105I GACNNNNNGTC 1 cut(s) 1255
EarI CTCTTC 1 cut(s) 48
EciI GGCGGA 1 cut(s) 171
Ecl136II GAGCTC 1 cut(s) 1018
Eco130I CCWWGG 6 cut(s) 185, 203, 826, 960, 1031, 1170
Eco24I GRGCYC 1 cut(s) 1020
Eco31I GGTCTC 2 cut(s) 350, 786
Eco32I GATATC 1 cut(s) 1165
Eco47I GGWCC 2 cut(s) 378, 434
Eco53kI GAGCTC 1 cut(s) 1018
Eco88I CYCGRG 1 cut(s) 789
EcoICRI GAGCTC 1 cut(s) 1018
EcoRII CCWGG 3 cut(s) 316, 349, 972
EcoRV GATATC 1 cut(s) 1165
EcoT14I CCWWGG 6 cut(s) 185, 203, 826, 960, 1031, 1170
EcoT38I GRGCYC 1 cut(s) 1020
ErhI CCWWGG 6 cut(s) 185, 203, 826, 960, 1031, 1170
FaeI CATG 5 cut(s) 99, 145, 488, 874, 1035
FaqI GGGAC 2 cut(s) 170, 797
FatI CATG 5 cut(s) 95, 141, 484, 870, 1031
FauI CCCGC 2 cut(s) 72, 276
FblI GTMKAC 1 cut(s) 731
Fnu4HI GCNGC 6 cut(s) 100, 400, 669, 676, 772, 786
FokI GGATG 2 cut(s) 438, 977
FriOI GRGCYC 1 cut(s) 1020
Fsp4HI GCNGC 6 cut(s) 100, 400, 669, 676, 772, 786
FspBI CTAG 4 cut(s) 275, 290, 915, 1061
GluI GCNGC 6 cut(s) 100, 400, 669, 676, 772, 786
GsaI CCCAGC 2 cut(s) 459, 819
GsuI CTGGAG 1 cut(s) 1230
HaeIII GGCC 6 cut(s) 175, 447, 788, 834, 852, 1036
HapII CCGG 5 cut(s) 331, 422, 515, 564, 1010
HgaI GACGC 1 cut(s) 56
Hin1II CATG 5 cut(s) 99, 145, 488, 874, 1035
HinfI GANTC 3 cut(s) 209, 810, 1003
HpaII CCGG 5 cut(s) 331, 422, 515, 564, 1010
HphI GGTGA 2 cut(s) 1078, 1251
Hpy166II GTNNAC 3 cut(s) 732, 868, 1177
Hpy188I TCNGA 3 cut(s) 7, 268, 434
Hpy188III TCNNGA 6 cut(s) 85, 242, 331, 422, 508, 1247
Hpy8I GTNNAC 3 cut(s) 732, 868, 1177
Hpy99I CGWCG 3 cut(s) 262, 265, 268
HpyAV CCTTC 1 cut(s) 484
HpyCH4III ACNGT 5 cut(s) 890, 906, 1046, 1146, 1253
HpyCH4IV ACGT 3 cut(s) 33, 148, 576
HpyCH4V TGCA 5 cut(s) 99, 695, 710, 848, 936
HpyF10VI GCNNNNNNNGC 8 cut(s) 64, 99, 181, 479, 768, 831, 854, 1015
HpyF3I CTNAG 2 cut(s) 876, 1014
HpySE526I ACGT 3 cut(s) 33, 148, 576
Hsp92II CATG 5 cut(s) 99, 145, 488, 874, 1035
Kpn2I TCCGGA 2 cut(s) 330, 421
KroI GCCGGC 2 cut(s) 563, 1009
KroNI GCCGGC 2 cut(s) 565, 1011
Kzo9I GATC 4 cut(s) 244, 325, 418, 424
LguI GCTCTTC 1 cut(s) 48
LmnI GCTCC 2 cut(s) 233, 1023
Lsp1109I GCAGC 4 cut(s) 111, 655, 662, 758
LweI GCATC 5 cut(s) 454, 469, 501, 655, 704
MaeI CTAG 4 cut(s) 275, 290, 915, 1061
MaeII ACGT 3 cut(s) 33, 148, 576
MaeIII GTNAC 5 cut(s) 149, 890, 900, 1084, 1257
MalI GATC 4 cut(s) 246, 327, 420, 426
MbiI CCGCTC 1 cut(s) 1094
MboI GATC 4 cut(s) 244, 325, 418, 424
MboII GAAGA 8 cut(s) 53, 62, 65, 204, 230, 1045, 1069, 1201
MfeI CAATTG 1 cut(s) 843
MflI RGATCY 1 cut(s) 325
MhlI GDGCHC 1 cut(s) 1020
MlsI TGGCCA 1 cut(s) 1036
MluCI AATT 7 cut(s) 278, 719, 843, 1151, 1157, 1192, 1208
MluNI TGGCCA 1 cut(s) 1036
MlyI GAGTC 1 cut(s) 819
MmeI TCCRAC 2 cut(s) 246, 1081
Mox20I TGGCCA 1 cut(s) 1036
MroI TCCGGA 2 cut(s) 330, 421
MroNI GCCGGC 2 cut(s) 563, 1009
MroXI GAANNNNTTC 1 cut(s) 1196
MscI TGGCCA 1 cut(s) 1036
MseI TTAA 5 cut(s) 17, 36, 405, 524, 744
MslI CAYNNNNRTG 2 cut(s) 78, 589
Msp20I TGGCCA 1 cut(s) 1036
MspA1I CMGCKG 1 cut(s) 399
MspI CCGG 5 cut(s) 331, 422, 515, 564, 1010
MspR9I CCNGG 4 cut(s) 318, 351, 516, 974
MunI CAATTG 1 cut(s) 843
MvaI CCWGG 3 cut(s) 318, 351, 974
MvnI CGCG 1 cut(s) 67
MwoI GCNNNNNNNGC 8 cut(s) 64, 99, 181, 479, 768, 831, 854, 1015
NaeI GCCGGC 2 cut(s) 565, 1011
NciI CCSGG 1 cut(s) 516
NcoI CCATGG 1 cut(s) 1031
NdeII GATC 4 cut(s) 244, 325, 418, 424
NgoMIV GCCGGC 2 cut(s) 563, 1009
NlaIII CATG 5 cut(s) 99, 145, 488, 874, 1035
NlaIV GGNNCC 4 cut(s) 176, 379, 715, 1138
NmuCI GTSAC 2 cut(s) 1084, 1257
NspI RCATGY 2 cut(s) 99, 874
NspV TTCGAA 2 cut(s) 1155, 1230
PciSI GCTCTTC 1 cut(s) 48
PdiI GCCGGC 2 cut(s) 565, 1011
PdmI GAANNNNTTC 1 cut(s) 1196
PfeI GAWTC 2 cut(s) 209, 1003
PflFI GACNNNGTC 1 cut(s) 256
PkrI GCNGC 6 cut(s) 101, 401, 670, 677, 773, 787
PleI GAGTC 1 cut(s) 818
PpsI GAGTC 1 cut(s) 818
Psp124BI GAGCTC 1 cut(s) 1020
Psp1406I AACGTT 1 cut(s) 148
Psp6I CCWGG 3 cut(s) 316, 349, 972
PspFI CCCAGC 2 cut(s) 455, 815
PspGI CCWGG 3 cut(s) 316, 349, 972
PspN4I GGNNCC 4 cut(s) 176, 379, 715, 1138
PspPI GGNCC 6 cut(s) 174, 378, 434, 446, 787, 833
PsuI RGATCY 1 cut(s) 325
PsyI GACNNNGTC 1 cut(s) 256
RsaI GTAC 2 cut(s) 637, 1143
RsaNI GTAC 2 cut(s) 636, 1142
RseI CAYNNNNRTG 2 cut(s) 78, 589
SacI GAGCTC 1 cut(s) 1020
SapI GCTCTTC 1 cut(s) 48
SaqAI TTAA 5 cut(s) 17, 36, 405, 524, 744
SatI GCNGC 6 cut(s) 100, 400, 669, 676, 772, 786
Sau3AI GATC 4 cut(s) 244, 325, 418, 424
Sau96I GGNCC 6 cut(s) 174, 378, 434, 446, 787, 833
SchI GAGTC 1 cut(s) 819
ScrFI CCNGG 4 cut(s) 318, 351, 516, 974
SduI GDGCHC 1 cut(s) 1020
SfaNI GCATC 5 cut(s) 454, 469, 501, 655, 704
SfcI CTRYAG 1 cut(s) 858
SfuI TTCGAA 2 cut(s) 1155, 1230
SinI GGWCC 2 cut(s) 378, 434
SmiMI CAYNNNNRTG 2 cut(s) 78, 589
Sse9I AATT 7 cut(s) 278, 719, 843, 1151, 1157, 1192, 1208
SspMI CTAG 4 cut(s) 275, 290, 915, 1061
SstI GAGCTC 1 cut(s) 1020
StyD4I CCNGG 4 cut(s) 316, 349, 514, 972
StyI CCWWGG 6 cut(s) 185, 203, 826, 960, 1031, 1170
TaaI ACNGT 5 cut(s) 890, 906, 1046, 1146, 1253
TaiI ACGT 3 cut(s) 36, 151, 579
TaqI TCGA 4 cut(s) 417, 477, 1155, 1230
TasI AATT 7 cut(s) 278, 719, 843, 1151, 1157, 1192, 1208
TauI GCSGC 2 cut(s) 402, 788
TfiI GAWTC 2 cut(s) 209, 1003
Tru1I TTAA 5 cut(s) 17, 36, 405, 524, 744
Tru9I TTAA 5 cut(s) 17, 36, 405, 524, 744
TscAI CASTG 1 cut(s) 991
TseFI GTSAC 2 cut(s) 1084, 1257
TseI GCWGC 4 cut(s) 99, 668, 675, 771
Tsp45I GTSAC 2 cut(s) 1084, 1257
TspDTI ATGAA 3 cut(s) 938, 981, 1016
TspGWI ACGGA 2 cut(s) 543, 1196
TspRI CASTG 1 cut(s) 991
Tth111I GACNNNGTC 1 cut(s) 256
VpaK11BI GGWCC 2 cut(s) 378, 434
XapI RAATTY 1 cut(s) 1157
XceI RCATGY 2 cut(s) 99, 874
XmiI GTMKAC 1 cut(s) 731
XmnI GAANNNNTTC 1 cut(s) 1196
XspI CTAG 4 cut(s) 275, 290, 915, 1061
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.