Rroxscaffold_4G00332610

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000004
OG0000213
Physical Location & Seq
Reverse (-)
66790724 .. 66792354
1631 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_4G00332610.1

Sequence Viewer

Length: 1311 bp
ATGTCCCCCAAAACCAGTCTCAACCTAGCCGACAGAGCCAGCGAAGGCGAAGACGAACGGCATCATCGGCTTCGACGCTGCCGTGAACCACCGCATCATAAGGCTGATAAGCACAGGAGGTCTAAGAAGAAGAAGAAGAAGAAGAGAAGTGAGAAGTTGAAGTTGAACGAGGAAGAGGCTAACAAGTCTCTGTACATATGTCACATTGAGCACCACCCTGGAAAGTGGGTCGCTTATGTTGTCCGCGCCATCAACTTGTCCGATTTGTTGTTATCATCAGAAGACGATGATGGTTTGCAATTACGGCAGGTGGGTTATAAGGCCGGGGATGAACTCCCCGGTTCTGTGGGTTGCGGGGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGGCCGTATGCCTTCATTTGATCGTCCCGACATAGTTTGGCATAGAGATGTTTACGCCTTTGAAACTGACCCCAACAAGCACAAGCAGCCTCGTGATAATAGTAGAATTACCAAGATGGGTGGCACATTAGTTGAAGCCAAGTTCCTTCCTCTGATGGAGGAGGTGGGGGGCAAACTGTATGCACTTTCATATACGCTGGTGGCTGATCCTCCCTCATTTGAGGTATTGGACCCGAAAGTGGGGACTTGGGCGCCCCTGCCTCAGCCTCCATTCTTCAAACGTCAGGGTCAGTATAACCGCGGTGGCTTCCTATCTTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGGAGAGATGTCCTGTCTTCTGTTTTGATGTAGCTCACCCAGACAGAGGATGGAGATTAGTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGAAAACAAAGCTTTGGTCCTGGACCTGCCTGCGGCGGCTGATGACAAGAAGAAGATAATGTTTGCCTATAGTTTTGTTCGTTGGCATCTAGGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCTATCGCACGAATTGGTGATTTTAAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCACAAAGATGTTATTTTGTCCATATAGGAGGTCAGAAAGCCTGCATTGTTGCCCCCGAATTGGTTAGGCCATATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACAGGGTGTTGCCATACCATTTCAATTTGAAGTTGATATCACCAAGGTCGACAAGGACGAGAAGAATTGTTTGACCCTCCAATTCATGCCTACTCGTATCTTCGAATTCTATACCAACCCGTCCACTTTTCCTGATCCTGAAGCGGAAGGTTGCTTTGTGCTATAA

Protein Analysis

436

Amino Acids

49.75

Weight (kDa)

8.79

Isoelectric Point (pI)

51.11

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 176 - 271 1e-11 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 318
AarI CACCTGC 1 cut(s) 298
Acc36I ACCTGC 2 cut(s) 298, 879
AccB1I GGYRCC 2 cut(s) 652, 731
AccI GTMKAC 1 cut(s) 1194
AccII CGCG 3 cut(s) 246, 702, 831
AclWI GGATC 2 cut(s) 602, 1274
AcoI YGGCCR 1 cut(s) 403
AcsI RAATTY 2 cut(s) 1025, 1250
AcuI CTGAAG 1 cut(s) 1305
AcyI GRCGYC 1 cut(s) 653
AdeI CACNNNGTG 1 cut(s) 1151
AfaI GTAC 1 cut(s) 194
AfiI CCNNNNNNNGG 5 cut(s) 640, 641, 797, 877, 1090
AgsI TTSAA 8 cut(s) 160, 166, 464, 536, 679, 848, 1169, 1175
AjnI CCWGG 2 cut(s) 217, 864
AluBI AGCT 3 cut(s) 785, 857, 1000
AluI AGCT 3 cut(s) 785, 857, 1000
Alw21I GWGCWC 1 cut(s) 213
Alw26I GTCTC 4 cut(s) 23, 192, 753, 817
AlwI GGATC 2 cut(s) 602, 1274
AlwNI CAGNNNCTG 1 cut(s) 728
AoxI GGCC 4 cut(s) 321, 403, 832, 1097
ApeKI GCWGC 3 cut(s) 78, 487, 1000
ApoI RAATTY 2 cut(s) 1025, 1250
ArsI GACNNNNNNTTYG 2 cut(s) 846, 878
AspLEI GCGC 2 cut(s) 248, 655
AspS9I GGNCC 5 cut(s) 631, 833, 862, 868, 1112
AsuC2I CCSGG 3 cut(s) 325, 339, 370
AsuHPI GGTGA 3 cut(s) 779, 1001, 1177
AsuII TTCGAA 1 cut(s) 1248
AvaII GGWCC 4 cut(s) 631, 862, 868, 1112
AxyI CCTNAGG 1 cut(s) 1014
BanI GGYRCC 2 cut(s) 652, 731
BanII GRGCYC 1 cut(s) 368
BauI CACGAG 1 cut(s) 492
BbsI GAAGAC 3 cut(s) 57, 288, 760
Bbv12I GWGCWC 1 cut(s) 213
BbvCI CCTCAGC 1 cut(s) 663
BbvI GCAGC 3 cut(s) 65, 499, 987
BccI CCATC 5 cut(s) 257, 284, 511, 550, 795
BceAI ACGGC 4 cut(s) 66, 74, 320, 390
BciT130I CCWGG 2 cut(s) 219, 866
BcnI CCSGG 3 cut(s) 325, 339, 370
BcoDI GTCTC 4 cut(s) 23, 192, 753, 817
BfaI CTAG 2 cut(s) 26, 935
BfmI CTRYAG 1 cut(s) 913
BfoI RGCGCY 1 cut(s) 656
BfuAI ACCTGC 2 cut(s) 298, 879
BglI GCCNNNNNGGC 1 cut(s) 831
BisI GCNGC 8 cut(s) 79, 384, 403, 488, 832, 879, 882, 1001
BlsI GCNGC 8 cut(s) 80, 385, 404, 489, 833, 880, 883, 1002
Bme1390I CCNGG 5 cut(s) 219, 325, 339, 370, 866
Bme18I GGWCC 4 cut(s) 631, 862, 868, 1112
BmgT120I GGNCC 5 cut(s) 631, 833, 862, 868, 1112
BmiI GGNNCC 4 cut(s) 367, 633, 654, 733
BmrFI CCNGG 5 cut(s) 219, 325, 339, 370, 866
BmsI GCATC 3 cut(s) 70, 103, 940
BpiI GAAGAC 3 cut(s) 57, 288, 760
Bpu10I CCTNAGC 1 cut(s) 663
Bpu14I TTCGAA 1 cut(s) 1248
BpuMI CCSGG 3 cut(s) 325, 339, 370
BsaHI GRCGYC 1 cut(s) 653
BsaJI CCNNGG 7 cut(s) 217, 324, 337, 700, 954, 1004, 1188
Bsc4I CCNNNNNNNGG 5 cut(s) 640, 641, 797, 877, 1090
Bse118I RCCGGY 1 cut(s) 386
Bse1I ACTGG 2 cut(s) 15, 733
Bse21I CCTNAGG 1 cut(s) 1014
BseBI CCWGG 2 cut(s) 219, 866
BseDI CCNNGG 7 cut(s) 217, 324, 337, 700, 954, 1004, 1188
BseGI GGATG 2 cut(s) 334, 806
BseLI CCNNNNNNNGG 5 cut(s) 640, 641, 797, 877, 1090
BseMII CTCAG 3 cut(s) 677, 764, 1028
BseNI ACTGG 2 cut(s) 15, 733
BseRI GAGGAG 1 cut(s) 575
BseX3I CGGCCG 1 cut(s) 403
BseXI GCAGC 3 cut(s) 65, 499, 987
BseYI CCCAGC 1 cut(s) 1130
Bsh1236I CGCG 3 cut(s) 246, 702, 831
Bsh1285I CGRYCG 1 cut(s) 406
BshFI GGCC 4 cut(s) 323, 405, 834, 1099
BshNI GGYRCC 2 cut(s) 652, 731
BsiEI CGRYCG 1 cut(s) 406
BsiHKAI GWGCWC 1 cut(s) 213
BsiSI CCGG 4 cut(s) 324, 339, 370, 387
BslFI GGGAC 3 cut(s) 411, 658, 1147
BslI CCNNNNNNNGG 5 cut(s) 640, 641, 797, 877, 1090
BsmAI GTCTC 4 cut(s) 23, 192, 753, 817
BsmFI GGGAC 3 cut(s) 411, 658, 1147
BsnI GGCC 4 cut(s) 323, 405, 834, 1099
Bsp119I TTCGAA 1 cut(s) 1248
Bsp1286I GDGCHC 2 cut(s) 213, 368
Bsp1407I TGTACA 1 cut(s) 192
Bsp143I GATC 3 cut(s) 421, 607, 1279
BspANI GGCC 4 cut(s) 323, 405, 834, 1099
BspCNI CTCAG 3 cut(s) 676, 763, 1027
BspFNI CGCG 3 cut(s) 246, 702, 831
BspLI GGNNCC 4 cut(s) 367, 633, 654, 733
BspMI ACCTGC 2 cut(s) 298, 879
BspPI GGATC 2 cut(s) 602, 1274
BspT104I TTCGAA 1 cut(s) 1248
BspT107I GGYRCC 2 cut(s) 652, 731
BsrFI RCCGGY 1 cut(s) 386
BsrGI TGTACA 1 cut(s) 192
BsrI ACTGG 2 cut(s) 15, 733
BssAI RCCGGY 1 cut(s) 386
BssECI CCNNGG 7 cut(s) 217, 324, 337, 700, 954, 1004, 1188
BssMI GATC 3 cut(s) 421, 607, 1279
BssNI GRCGYC 1 cut(s) 653
BssSI CACGAG 1 cut(s) 492
BssT1I CCWWGG 3 cut(s) 954, 1004, 1188
Bst2BI CACGAG 1 cut(s) 492
Bst2UI CCWGG 2 cut(s) 219, 866
Bst4CI ACNGT 1 cut(s) 579
Bst6I CTCTTC 3 cut(s) 137, 168, 820
BstACI GRCGYC 1 cut(s) 653
BstAUI TGTACA 1 cut(s) 192
BstBI TTCGAA 1 cut(s) 1248
BstC8I GCNNGC 4 cut(s) 40, 388, 876, 1072
BstDEI CTNAG 4 cut(s) 123, 663, 750, 1014
BstDSI CCRYGG 1 cut(s) 700
BstF5I GGATG 2 cut(s) 334, 806
BstFNI CGCG 3 cut(s) 246, 702, 831
BstH2I RGCGCY 1 cut(s) 656
BstHHI GCGC 2 cut(s) 248, 655
BstKTI GATC 3 cut(s) 424, 610, 1282
BstMAI GTCTC 4 cut(s) 23, 192, 753, 817
BstMBI GATC 3 cut(s) 421, 607, 1279
BstMCI CGRYCG 1 cut(s) 406
BstMWI GCNNNNNNNGC 6 cut(s) 35, 67, 304, 487, 831, 1009
BstNI CCWGG 2 cut(s) 219, 866
BstSCI CCNGG 5 cut(s) 217, 323, 337, 368, 864
BstSFI CTRYAG 1 cut(s) 913
BstUI CGCG 3 cut(s) 246, 702, 831
BstV1I GCAGC 3 cut(s) 65, 499, 987
BstV2I GAAGAC 3 cut(s) 57, 288, 760
BstZI CGGCCG 1 cut(s) 403
Bsu36I CCTNAGG 1 cut(s) 1014
BsuRI GGCC 4 cut(s) 323, 405, 834, 1099
BtgI CCRYGG 1 cut(s) 700
BtsCI GGATG 2 cut(s) 334, 806
BveI ACCTGC 2 cut(s) 298, 879
Cac8I GCNNGC 4 cut(s) 40, 388, 876, 1072
CaiI CAGNNNCTG 1 cut(s) 728
CfoI GCGC 2 cut(s) 248, 655
Cfr10I RCCGGY 1 cut(s) 386
Cfr13I GGNCC 5 cut(s) 631, 833, 862, 868, 1112
Cfr42I CCGCGG 1 cut(s) 703
CseI GACGC 1 cut(s) 84
Csp6I GTAC 1 cut(s) 193
CspCI CAANNNNNGTGG 2 cut(s) 502, 537
CviAII CATG 2 cut(s) 391, 1231
CviQI GTAC 1 cut(s) 193
DdeI CTNAG 4 cut(s) 123, 663, 750, 1014
DinI GGCGCC 1 cut(s) 654
DpnI GATC 3 cut(s) 423, 609, 1281
DpnII GATC 3 cut(s) 421, 607, 1279
DraIII CACNNNGTG 1 cut(s) 1151
EaeI YGGCCR 1 cut(s) 403
EagI CGGCCG 1 cut(s) 403
Eam1104I CTCTTC 3 cut(s) 137, 168, 820
EarI CTCTTC 3 cut(s) 137, 168, 820
EclXI CGGCCG 1 cut(s) 403
Eco130I CCWWGG 3 cut(s) 954, 1004, 1188
Eco24I GRGCYC 1 cut(s) 368
Eco32I GATATC 1 cut(s) 1183
Eco47I GGWCC 4 cut(s) 631, 862, 868, 1112
Eco52I CGGCCG 1 cut(s) 403
Eco57I CTGAAG 1 cut(s) 1305
Eco81I CCTNAGG 1 cut(s) 1014
EcoO109I RGGNCCY 1 cut(s) 1112
EcoRI GAATTC 1 cut(s) 1250
EcoRII CCWGG 2 cut(s) 217, 864
EcoRV GATATC 1 cut(s) 1183
EcoT14I CCWWGG 3 cut(s) 954, 1004, 1188
EcoT38I GRGCYC 1 cut(s) 368
EgeI GGCGCC 1 cut(s) 654
EheI GGCGCC 1 cut(s) 654
ErhI CCWWGG 3 cut(s) 954, 1004, 1188
FaeI CATG 2 cut(s) 394, 1234
FaqI GGGAC 3 cut(s) 411, 658, 1147
FatI CATG 2 cut(s) 390, 1230
FauI CCCGC 1 cut(s) 347
FauNDI CATATG 1 cut(s) 197
FblI GTMKAC 1 cut(s) 1194
Fnu4HI GCNGC 8 cut(s) 79, 384, 403, 488, 832, 879, 882, 1001
FokI GGATG 2 cut(s) 341, 813
FriOI GRGCYC 1 cut(s) 368
Fsp4HI GCNGC 8 cut(s) 79, 384, 403, 488, 832, 879, 882, 1001
FspBI CTAG 2 cut(s) 26, 935
GlaI GCGC 2 cut(s) 247, 654
GluI GCNGC 8 cut(s) 79, 384, 403, 488, 832, 879, 882, 1001
GsaI CCCAGC 1 cut(s) 1134
HaeII RGCGCY 1 cut(s) 656
HaeIII GGCC 4 cut(s) 323, 405, 834, 1099
HapII CCGG 4 cut(s) 324, 339, 370, 387
HgaI GACGC 1 cut(s) 84
HhaI GCGC 2 cut(s) 248, 655
Hin1I GRCGYC 1 cut(s) 653
Hin1II CATG 2 cut(s) 394, 1234
Hin6I GCGC 2 cut(s) 246, 653
HinP1I GCGC 2 cut(s) 246, 653
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HindIII AAGCTT 1 cut(s) 855
HinfI GANTC 2 cut(s) 971, 1135
HpaII CCGG 4 cut(s) 324, 339, 370, 387
HphI GGTGA 3 cut(s) 779, 1001, 1177
Hpy166II GTNNAC 4 cut(s) 86, 454, 1195, 1269
Hpy188I TCNGA 4 cut(s) 262, 280, 555, 1065
Hpy188III TCNNGA 7 cut(s) 428, 494, 752, 968, 1016, 1277, 1283
Hpy8I GTNNAC 4 cut(s) 86, 454, 1195, 1269
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 4 cut(s) 38, 423, 557, 1286
HpyCH4III ACNGT 1 cut(s) 579
HpyCH4IV ACGT 1 cut(s) 682
HpyCH4V TGCA 5 cut(s) 298, 584, 722, 1031, 1074
HpyF10VI GCNNNNNNNGC 6 cut(s) 35, 67, 304, 487, 831, 1009
HpyF3I CTNAG 4 cut(s) 123, 663, 750, 1014
HpySE526I ACGT 1 cut(s) 682
Hsp92I GRCGYC 1 cut(s) 653
Hsp92II CATG 2 cut(s) 394, 1234
HspAI GCGC 2 cut(s) 246, 653
KasI GGCGCC 1 cut(s) 652
KroI GCCGGC 1 cut(s) 386
KroNI GCCGGC 1 cut(s) 388
KspI CCGCGG 1 cut(s) 703
Kzo9I GATC 3 cut(s) 421, 607, 1279
LmnI GCTCC 1 cut(s) 371
Lsp1109I GCAGC 3 cut(s) 65, 499, 987
LweI GCATC 3 cut(s) 70, 103, 940
MaeI CTAG 2 cut(s) 26, 935
MaeII ACGT 1 cut(s) 682
MaeIII GTNAC 2 cut(s) 200, 724
MalI GATC 3 cut(s) 423, 609, 1281
MboI GATC 3 cut(s) 421, 607, 1279
MhlI GDGCHC 2 cut(s) 213, 368
MluCI AATT 9 cut(s) 299, 507, 984, 1025, 1088, 1169, 1210, 1226, 1250
Mly113I GGCGCC 1 cut(s) 653
MlyI GAGTC 1 cut(s) 1129
MroNI GCCGGC 1 cut(s) 386
MseI TTAA 2 cut(s) 996, 1122
MslI CAYNNNNRTG 3 cut(s) 447, 737, 1036
MspA1I CMGCKG 1 cut(s) 702
MspI CCGG 4 cut(s) 324, 339, 370, 387
MspR9I CCNGG 5 cut(s) 219, 325, 339, 370, 866
MvaI CCWGG 2 cut(s) 219, 866
MvnI CGCG 3 cut(s) 246, 702, 831
MwoI GCNNNNNNNGC 6 cut(s) 35, 67, 304, 487, 831, 1009
NaeI GCCGGC 1 cut(s) 388
NarI GGCGCC 1 cut(s) 653
NciI CCSGG 3 cut(s) 325, 339, 370
NdeI CATATG 1 cut(s) 197
NdeII GATC 3 cut(s) 421, 607, 1279
NgoMIV GCCGGC 1 cut(s) 386
NlaIII CATG 2 cut(s) 394, 1234
NlaIV GGNNCC 4 cut(s) 367, 633, 654, 733
NmuCI GTSAC 1 cut(s) 200
NspV TTCGAA 1 cut(s) 1248
PaqCI CACCTGC 1 cut(s) 298
PcsI WCGNNNNNNNCGW 2 cut(s) 79, 1200
PdiI GCCGGC 1 cut(s) 388
PfeI GAWTC 1 cut(s) 971
PfoI TCCNGGA 2 cut(s) 368, 864
PkrI GCNGC 8 cut(s) 80, 385, 404, 489, 833, 880, 883, 1002
PleI GAGTC 1 cut(s) 1129
PluTI GGCGCC 1 cut(s) 656
PpsI GAGTC 1 cut(s) 1129
PpuMI RGGWCCY 1 cut(s) 1112
PsiI TTATAA 1 cut(s) 318
Psp5II RGGWCCY 1 cut(s) 1112
Psp6I CCWGG 2 cut(s) 217, 864
PspFI CCCAGC 1 cut(s) 1130
PspGI CCWGG 2 cut(s) 217, 864
PspN4I GGNNCC 4 cut(s) 367, 633, 654, 733
PspPI GGNCC 5 cut(s) 631, 833, 862, 868, 1112
PspPPI RGGWCCY 1 cut(s) 1112
PstNI CAGNNNCTG 1 cut(s) 728
RsaI GTAC 1 cut(s) 194
RsaNI GTAC 1 cut(s) 193
RseI CAYNNNNRTG 3 cut(s) 447, 737, 1036
SacII CCGCGG 1 cut(s) 703
SalI GTCGAC 1 cut(s) 1193
SaqAI TTAA 2 cut(s) 996, 1122
SatI GCNGC 8 cut(s) 79, 384, 403, 488, 832, 879, 882, 1001
Sau3AI GATC 3 cut(s) 421, 607, 1279
Sau96I GGNCC 5 cut(s) 631, 833, 862, 868, 1112
SchI GAGTC 1 cut(s) 1129
ScrFI CCNGG 5 cut(s) 219, 325, 339, 370, 866
SduI GDGCHC 2 cut(s) 213, 368
SfaNI GCATC 3 cut(s) 70, 103, 940
SfcI CTRYAG 1 cut(s) 913
SfoI GGCGCC 1 cut(s) 654
Sfr303I CCGCGG 1 cut(s) 703
SfuI TTCGAA 1 cut(s) 1248
SgrBI CCGCGG 1 cut(s) 703
SinI GGWCC 4 cut(s) 631, 862, 868, 1112
SmiMI CAYNNNNRTG 3 cut(s) 447, 737, 1036
Sse9I AATT 9 cut(s) 299, 507, 984, 1025, 1088, 1169, 1210, 1226, 1250
SspDI GGCGCC 1 cut(s) 652
SspMI CTAG 2 cut(s) 26, 935
StyD4I CCNGG 5 cut(s) 217, 323, 337, 368, 864
StyI CCWWGG 3 cut(s) 954, 1004, 1188
TaaI ACNGT 1 cut(s) 579
TaiI ACGT 1 cut(s) 685
TaqI TCGA 3 cut(s) 73, 1194, 1248
TasI AATT 9 cut(s) 299, 507, 984, 1025, 1088, 1169, 1210, 1226, 1250
TatI WGTACW 1 cut(s) 192
TauI GCSGC 5 cut(s) 386, 405, 834, 881, 884
TfiI GAWTC 1 cut(s) 971
Tru1I TTAA 2 cut(s) 996, 1122
Tru9I TTAA 2 cut(s) 996, 1122
TseFI GTSAC 1 cut(s) 200
TseI GCWGC 3 cut(s) 78, 487, 1000
Tsp45I GTSAC 1 cut(s) 200
TspDTI ATGAA 6 cut(s) 345, 405, 407, 579, 1038, 1219
VpaK11BI GGWCC 4 cut(s) 631, 862, 868, 1112
XapI RAATTY 2 cut(s) 1025, 1250
XcmI CCANNNNNNNNNTGG 1 cut(s) 798
XmiI GTMKAC 1 cut(s) 1194
XspI CTAG 2 cut(s) 26, 935
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.