RchiOBHm_Chr4g0406891

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
4
OG0000213
Physical Location & Seq
Reverse (-)
28924293 .. 28926012
1720 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ37817

Sequence Viewer

Length: 1299 bp
ATGACCGAAAAATCGTTGAACCCAGAAAGCTATGGTGGTGAAGAAGAAGAAGAAGAAGAAGAAAGGCCGCATCGGCATAAGCGTGTGAAGACGGGCACAGGTAGCGTGGTGAAGATGGAGCCTCTGGTTCGGTGCGGTCGAGGATTGAAGGAGGAGGAGGACTTTGTCAATAAGTCTCTATTCATTTGTAGCTTTGAATCGTATAAGTCCATACACAACATCCGGGATGCTGCTTATGTTGTTCGCGCCATCAATCTTGGCGATCTGCTGACATCGTCGTCGTCTGTGAAACTAGAATTACGTCAACTGGCGTTCATGGCCGACAAAGATCTCCCAGCTAAAGGGGGTTGCGGTGTTTTTGGCTCCAAAATTGTTTTCGCCAGCGGCTTGAAACCCAACTTCGTGAAACCCGACTTCCAATTTGGGTCACCATACGGCCCAGCTTGCAGCACGGAAGTTTATGCCTTTGATATCCATGACCCCAAGCAAGAAATCGTCAAGATAGACGGGGCTTTTGGGACTTTAAACGGAGGGAAACACGACCCTGTGCTTGCTGAGTTTGGCGGCAAACTCTACGCTCTGTCCTGTAAGACCTTTGTTAAAGATGGTGTTTCATTTGAAGTATTTGACCCCGAAAAGGGTACTTGGTCGGTTCTGCCAAAGTATCCTAATCTTGCCGGCTGGTTCTCCTATGCAATTGCGGGCACCAAATTGTTTATGTCTTGCCAATACCACTGGAGTAAAAACCGATCGATTTACTGCTTTGACCTCGACGACCCAAACAAACAAGAATGGAGGAGAGTCCCCAGTATGTGCCAAGGCGGCCCTTTTCCATTTGTAGGCAAATCTCTAGTGCTGGACCTGCCGCAGCCTGAACACCATAACAAAAAGTTACTGTTGACCTCTTACCGTGGCTCCTTCCGCACTAGGGTAGTAGTTTATCTTATGTCCTTGGATGAAAACCAAGAAGATATCAGCGAAATCCAGGAGTTGAAGTTGCCTGCAGAGCTCCCTCGTCAACCAAATGACTGTCATTTCTTCCATCTAGGGGGAAACAATGTCTGCCTTGTCACCACCGCTTTCAGAAACACAGATGAAGAGGATGAAGCAATTAAGCCTGGGATTCATACCGTCCGTGGTGCTGCCATACCATTTCAATTTGAATTTGATATCTCCAAGGTGGACAAGGACAGGAAGAATTGTTTCACTGTTCGATTCCAGCCTCCTCGCATTTTCGGATACCACTCCGGTCCAGACTGCATCGTACCGCCCCGAACACTTGGTTGCTTTGTGCTTTAA

Protein Analysis

432

Amino Acids

48.61

Weight (kDa)

6.34

Isoelectric Point (pI)

46.98

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 174 - 363 4e-07 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 277
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 1 cut(s) 704
AccII CGCG 1 cut(s) 246
AcoI YGGCCR 1 cut(s) 318
AcsI RAATTY 1 cut(s) 1163
AfaI GTAC 2 cut(s) 643, 1266
AfiI CCNNNNNNNGG 6 cut(s) 341, 637, 638, 839, 928, 1048
AgsI TTSAA 8 cut(s) 19, 148, 197, 391, 620, 994, 1157, 1163
AjnI CCWGG 2 cut(s) 984, 1117
AjuI GAANNNNNNNTTGG 2 cut(s) 359, 391
AluBI AGCT 5 cut(s) 30, 192, 338, 443, 1009
AluI AGCT 5 cut(s) 30, 192, 338, 443, 1009
Alw21I GWGCWC 1 cut(s) 1011
Alw26I GTCTC 1 cut(s) 180
AoxI GGCC 4 cut(s) 65, 318, 436, 823
ApeKI GCWGC 4 cut(s) 230, 447, 868, 1142
ApoI RAATTY 1 cut(s) 1163
ArsI GACNNNNNNTTYG 4 cut(s) 404, 436, 497, 529
Asp700I GAANNNNTTC 1 cut(s) 1202
AspLEI GCGC 1 cut(s) 248
AspS9I GGNCC 4 cut(s) 437, 824, 859, 1250
AsuC2I CCSGG 1 cut(s) 224
AsuHPI GGTGA 4 cut(s) 50, 121, 420, 1063
AvaII GGWCC 2 cut(s) 859, 1250
BaeGI GKGCMC 2 cut(s) 98, 707
BanI GGYRCC 1 cut(s) 704
BanII GRGCYC 1 cut(s) 1011
BbsI GAAGAC 1 cut(s) 95
Bbv12I GWGCWC 1 cut(s) 1011
BbvI GCAGC 4 cut(s) 217, 459, 880, 1129
BccI CCATC 4 cut(s) 109, 257, 599, 1050
BceAI ACGGC 1 cut(s) 451
BciT130I CCWGG 2 cut(s) 986, 1119
BciVI GTATCC 2 cut(s) 675, 1232
BcnI CCSGG 1 cut(s) 224
BcoDI GTCTC 1 cut(s) 180
BfaI CTAG 4 cut(s) 293, 851, 927, 1046
BfmI CTRYAG 1 cut(s) 1002
BfuAI ACCTGC 1 cut(s) 870
BfuI GTATCC 2 cut(s) 675, 1232
BglI GCCNNNNNGGC 2 cut(s) 73, 822
BglII AGATCT 1 cut(s) 328
BisI GCNGC 9 cut(s) 68, 231, 385, 448, 565, 823, 866, 869, 1143
BlsI GCNGC 9 cut(s) 69, 232, 386, 449, 566, 824, 867, 870, 1144
Bme1390I CCNGG 3 cut(s) 224, 986, 1119
Bme18I GGWCC 2 cut(s) 859, 1250
BmgT120I GGNCC 4 cut(s) 437, 824, 859, 1250
BmiI GGNNCC 4 cut(s) 120, 364, 706, 916
BmrFI CCNGG 3 cut(s) 224, 986, 1119
BmrI ACTGGG 1 cut(s) 801
BmsI GCATC 3 cut(s) 79, 217, 1269
BmuI ACTGGG 1 cut(s) 801
BpiI GAAGAC 1 cut(s) 95
BpmI CTGGAG 1 cut(s) 757
BpuMI CCSGG 1 cut(s) 224
Bsa29I ATCGAT 1 cut(s) 752
BsaJI CCNNGG 6 cut(s) 817, 910, 951, 1118, 1135, 1176
BsaWI WCCGGW 1 cut(s) 1247
BsaXI ACNNNNNCTCC 4 cut(s) 899, 929, 980, 1010
Bsc4I CCNNNNNNNGG 6 cut(s) 341, 637, 638, 839, 928, 1048
Bse118I RCCGGY 1 cut(s) 677
Bse1I ACTGG 3 cut(s) 312, 740, 807
BseBI CCWGG 2 cut(s) 986, 1119
BseCI ATCGAT 1 cut(s) 752
BseDI CCNNGG 6 cut(s) 817, 910, 951, 1118, 1135, 1176
BseGI GGATG 4 cut(s) 219, 232, 961, 1108
BseLI CCNNNNNNNGG 6 cut(s) 341, 637, 638, 839, 928, 1048
BseMII CTCAG 1 cut(s) 546
BseNI ACTGG 3 cut(s) 312, 740, 807
BseRI GAGGAG 4 cut(s) 167, 170, 811, 1215
BseSI GKGCMC 2 cut(s) 98, 707
BseXI GCAGC 4 cut(s) 217, 459, 880, 1129
BseYI CCCAGC 2 cut(s) 334, 439
Bsh1236I CGCG 1 cut(s) 246
Bsh1285I CGRYCG 2 cut(s) 139, 752
BshFI GGCC 4 cut(s) 67, 320, 438, 825
BshNI GGYRCC 1 cut(s) 704
BshVI ATCGAT 1 cut(s) 752
BsiEI CGRYCG 2 cut(s) 139, 752
BsiHKAI GWGCWC 1 cut(s) 1011
BsiSI CCGG 3 cut(s) 223, 678, 1248
BslFI GGGAC 2 cut(s) 532, 788
BslI CCNNNNNNNGG 6 cut(s) 341, 637, 638, 839, 928, 1048
BsmAI GTCTC 1 cut(s) 180
BsmFI GGGAC 2 cut(s) 532, 788
BsnI GGCC 4 cut(s) 67, 320, 438, 825
Bsp1286I GDGCHC 3 cut(s) 98, 707, 1011
Bsp143I GATC 3 cut(s) 262, 328, 749
BspANI GGCC 4 cut(s) 67, 320, 438, 825
BspCNI CTCAG 1 cut(s) 547
BspDI ATCGAT 1 cut(s) 752
BspFNI CGCG 1 cut(s) 246
BspLI GGNNCC 4 cut(s) 120, 364, 706, 916
BspMAI CTGCAG 1 cut(s) 1006
BspMI ACCTGC 1 cut(s) 870
BspT107I GGYRCC 1 cut(s) 704
BsrFI RCCGGY 1 cut(s) 677
BsrI ACTGG 3 cut(s) 312, 740, 807
BssAI RCCGGY 1 cut(s) 677
BssECI CCNNGG 6 cut(s) 817, 910, 951, 1118, 1135, 1176
BssMI GATC 3 cut(s) 262, 328, 749
BssT1I CCWWGG 3 cut(s) 817, 951, 1176
Bst2UI CCWGG 2 cut(s) 986, 1119
Bst4CI ACNGT 5 cut(s) 897, 911, 1031, 1132, 1210
Bst6I CTCTTC 1 cut(s) 1092
BstC8I GCNNGC 6 cut(s) 382, 445, 552, 679, 703, 1002
BstDEI CTNAG 1 cut(s) 555
BstDSI CCRYGG 2 cut(s) 910, 1135
BstEII GGTNACC 1 cut(s) 426
BstF5I GGATG 4 cut(s) 219, 232, 961, 1108
BstFNI CGCG 1 cut(s) 246
BstHHI GCGC 1 cut(s) 248
BstKTI GATC 3 cut(s) 265, 331, 752
BstMAI GTCTC 1 cut(s) 180
BstMBI GATC 3 cut(s) 262, 328, 749
BstMCI CGRYCG 2 cut(s) 139, 752
BstMWI GCNNNNNNNGC 8 cut(s) 73, 102, 317, 444, 822, 862, 921, 1006
BstNI CCWGG 2 cut(s) 986, 1119
BstPI GGTNACC 1 cut(s) 426
BstSCI CCNGG 3 cut(s) 222, 984, 1117
BstSFI CTRYAG 1 cut(s) 1002
BstSLI GKGCMC 2 cut(s) 98, 707
BstUI CGCG 1 cut(s) 246
BstV1I GCAGC 4 cut(s) 217, 459, 880, 1129
BstV2I GAAGAC 1 cut(s) 95
BstX2I RGATCY 1 cut(s) 328
BstYI RGATCY 1 cut(s) 328
Bsu15I ATCGAT 1 cut(s) 752
BsuI GTATCC 2 cut(s) 675, 1232
BsuRI GGCC 4 cut(s) 67, 320, 438, 825
BsuTUI ATCGAT 1 cut(s) 752
BtgI CCRYGG 2 cut(s) 910, 1135
BtsCI GGATG 4 cut(s) 219, 232, 961, 1108
BtsIMutI CAGTG 2 cut(s) 733, 1206
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 6 cut(s) 382, 445, 552, 679, 703, 1002
CfoI GCGC 1 cut(s) 248
Cfr10I RCCGGY 1 cut(s) 677
Cfr13I GGNCC 4 cut(s) 437, 824, 859, 1250
ClaI ATCGAT 1 cut(s) 752
Csp6I GTAC 2 cut(s) 642, 1265
CviAII CATG 2 cut(s) 316, 476
CviQI GTAC 2 cut(s) 642, 1265
DdeI CTNAG 1 cut(s) 555
DpnI GATC 3 cut(s) 264, 330, 751
DpnII GATC 3 cut(s) 262, 328, 749
DraI TTTAAA 1 cut(s) 525
DrdI GACNNNNNNGTC 1 cut(s) 277
DseDI GACNNNNNNGTC 1 cut(s) 277
EaeI YGGCCR 1 cut(s) 318
Eam1104I CTCTTC 1 cut(s) 1092
EarI CTCTTC 1 cut(s) 1092
Ecl136II GAGCTC 1 cut(s) 1009
Eco130I CCWWGG 3 cut(s) 817, 951, 1176
Eco24I GRGCYC 1 cut(s) 1011
Eco32I GATATC 3 cut(s) 472, 973, 1171
Eco47I GGWCC 2 cut(s) 859, 1250
Eco53kI GAGCTC 1 cut(s) 1009
Eco91I GGTNACC 1 cut(s) 426
EcoICRI GAGCTC 1 cut(s) 1009
EcoO65I GGTNACC 1 cut(s) 426
EcoRII CCWGG 2 cut(s) 984, 1117
EcoRV GATATC 3 cut(s) 472, 973, 1171
EcoT14I CCWWGG 3 cut(s) 817, 951, 1176
EcoT38I GRGCYC 1 cut(s) 1011
ErhI CCWWGG 3 cut(s) 817, 951, 1176
FaeI CATG 2 cut(s) 319, 479
FaqI GGGAC 2 cut(s) 532, 788
FatI CATG 2 cut(s) 315, 475
FauI CCCGC 1 cut(s) 694
Fnu4HI GCNGC 9 cut(s) 68, 231, 385, 448, 565, 823, 866, 869, 1143
FokI GGATG 4 cut(s) 206, 239, 968, 1115
FriOI GRGCYC 1 cut(s) 1011
Fsp4HI GCNGC 9 cut(s) 68, 231, 385, 448, 565, 823, 866, 869, 1143
FspBI CTAG 4 cut(s) 293, 851, 927, 1046
GlaI GCGC 1 cut(s) 247
GluI GCNGC 9 cut(s) 68, 231, 385, 448, 565, 823, 866, 869, 1143
GsaI CCCAGC 2 cut(s) 338, 443
GsuI CTGGAG 1 cut(s) 757
HaeIII GGCC 4 cut(s) 67, 320, 438, 825
HapII CCGG 3 cut(s) 223, 678, 1248
HhaI GCGC 1 cut(s) 248
Hin1II CATG 2 cut(s) 319, 479
Hin6I GCGC 1 cut(s) 246
HinP1I GCGC 1 cut(s) 246
HincII GTYRAC 3 cut(s) 305, 900, 1019
HindII GTYRAC 3 cut(s) 305, 900, 1019
HinfI GANTC 4 cut(s) 197, 801, 1123, 1215
HpaII CCGG 3 cut(s) 223, 678, 1248
HphI GGTGA 4 cut(s) 50, 121, 420, 1063
Hpy166II GTNNAC 4 cut(s) 305, 900, 1019, 1183
Hpy188I TCNGA 2 cut(s) 1085, 1238
Hpy188III TCNNGA 3 cut(s) 403, 499, 1253
Hpy8I GTNNAC 4 cut(s) 305, 900, 1019, 1183
Hpy99I CGWCG 3 cut(s) 280, 283, 776
HpyAV CCTTC 2 cut(s) 142, 928
HpyCH4III ACNGT 5 cut(s) 897, 911, 1031, 1132, 1210
HpyCH4IV ACGT 1 cut(s) 301
HpyCH4V TGCA 4 cut(s) 447, 695, 1004, 1260
HpyF10VI GCNNNNNNNGC 8 cut(s) 73, 102, 317, 444, 822, 862, 921, 1006
HpyF3I CTNAG 1 cut(s) 555
HpySE526I ACGT 1 cut(s) 301
Hsp92II CATG 2 cut(s) 319, 479
HspAI GCGC 1 cut(s) 246
KroI GCCGGC 1 cut(s) 677
KroNI GCCGGC 1 cut(s) 679
Kzo9I GATC 3 cut(s) 262, 328, 749
LmnI GCTCC 4 cut(s) 118, 368, 920, 1014
Lsp1109I GCAGC 4 cut(s) 217, 459, 880, 1129
LweI GCATC 3 cut(s) 79, 217, 1269
MaeI CTAG 4 cut(s) 293, 851, 927, 1046
MaeII ACGT 1 cut(s) 301
MaeIII GTNAC 3 cut(s) 426, 891, 1069
MalI GATC 3 cut(s) 264, 330, 751
MboI GATC 3 cut(s) 262, 328, 749
MfeI CAATTG 1 cut(s) 696
MflI RGATCY 1 cut(s) 328
MhlI GDGCHC 3 cut(s) 98, 707, 1011
MluCI AATT 9 cut(s) 296, 369, 419, 696, 710, 1110, 1157, 1163, 1198
MlyI GAGTC 1 cut(s) 810
MroNI GCCGGC 1 cut(s) 677
MroXI GAANNNNTTC 1 cut(s) 1202
MseI TTAA 4 cut(s) 524, 600, 1113, 1297
MslI CAYNNNNRTG 1 cut(s) 81
MspA1I CMGCKG 1 cut(s) 384
MspI CCGG 3 cut(s) 223, 678, 1248
MspR9I CCNGG 3 cut(s) 224, 986, 1119
MunI CAATTG 1 cut(s) 696
MvaI CCWGG 2 cut(s) 986, 1119
MvnI CGCG 1 cut(s) 246
MwoI GCNNNNNNNGC 8 cut(s) 73, 102, 317, 444, 822, 862, 921, 1006
NaeI GCCGGC 1 cut(s) 679
NciI CCSGG 1 cut(s) 224
NdeII GATC 3 cut(s) 262, 328, 749
NgoMIV GCCGGC 1 cut(s) 677
NlaIII CATG 2 cut(s) 319, 479
NlaIV GGNNCC 4 cut(s) 120, 364, 706, 916
NmuCI GTSAC 2 cut(s) 426, 1069
PcsI WCGNNNNNNNCGW 3 cut(s) 79, 136, 408
PdiI GCCGGC 1 cut(s) 679
PdmI GAANNNNTTC 1 cut(s) 1202
PfeI GAWTC 3 cut(s) 197, 1123, 1215
PflFI GACNNNGTC 2 cut(s) 164, 274
PfoI TCCNGGA 2 cut(s) 222, 984
PkrI GCNGC 9 cut(s) 69, 232, 386, 449, 566, 824, 867, 870, 1144
Ple19I CGATCG 1 cut(s) 752
PleI GAGTC 1 cut(s) 809
PpsI GAGTC 1 cut(s) 809
Psp124BI GAGCTC 1 cut(s) 1011
Psp6I CCWGG 2 cut(s) 984, 1117
PspEI GGTNACC 1 cut(s) 426
PspFI CCCAGC 2 cut(s) 334, 439
PspGI CCWGG 2 cut(s) 984, 1117
PspN4I GGNNCC 4 cut(s) 120, 364, 706, 916
PspPI GGNCC 4 cut(s) 437, 824, 859, 1250
PstI CTGCAG 1 cut(s) 1006
PsuI RGATCY 1 cut(s) 328
PsyI GACNNNGTC 2 cut(s) 164, 274
PvuI CGATCG 1 cut(s) 752
RsaI GTAC 2 cut(s) 643, 1266
RsaNI GTAC 2 cut(s) 642, 1265
RseI CAYNNNNRTG 1 cut(s) 81
SacI GAGCTC 1 cut(s) 1011
SaqAI TTAA 4 cut(s) 524, 600, 1113, 1297
SatI GCNGC 9 cut(s) 68, 231, 385, 448, 565, 823, 866, 869, 1143
Sau3AI GATC 3 cut(s) 262, 328, 749
Sau96I GGNCC 4 cut(s) 437, 824, 859, 1250
SchI GAGTC 1 cut(s) 810
ScrFI CCNGG 3 cut(s) 224, 986, 1119
SduI GDGCHC 3 cut(s) 98, 707, 1011
SfaNI GCATC 3 cut(s) 79, 217, 1269
SfcI CTRYAG 1 cut(s) 1002
SinI GGWCC 2 cut(s) 859, 1250
SmiMI CAYNNNNRTG 1 cut(s) 81
Sse9I AATT 9 cut(s) 296, 369, 419, 696, 710, 1110, 1157, 1163, 1198
SspMI CTAG 4 cut(s) 293, 851, 927, 1046
SstI GAGCTC 1 cut(s) 1011
StyD4I CCNGG 3 cut(s) 222, 984, 1117
StyI CCWWGG 3 cut(s) 817, 951, 1176
TaaI ACNGT 5 cut(s) 897, 911, 1031, 1132, 1210
TaiI ACGT 1 cut(s) 304
TaqI TCGA 4 cut(s) 139, 752, 771, 1213
TaqII GACCGA 1 cut(s) 20
TasI AATT 9 cut(s) 296, 369, 419, 696, 710, 1110, 1157, 1163, 1198
TauI GCSGC 5 cut(s) 70, 387, 567, 825, 868
TfiI GAWTC 3 cut(s) 197, 1123, 1215
Tru1I TTAA 4 cut(s) 524, 600, 1113, 1297
Tru9I TTAA 4 cut(s) 524, 600, 1113, 1297
TscAI CASTG 2 cut(s) 740, 1213
TseFI GTSAC 2 cut(s) 426, 1069
TseI GCWGC 4 cut(s) 230, 447, 868, 1142
Tsp45I GTSAC 2 cut(s) 426, 1069
TspDTI ATGAA 7 cut(s) 172, 304, 603, 972, 1110, 1115, 1119
TspGWI ACGGA 3 cut(s) 467, 543, 1124
TspRI CASTG 2 cut(s) 740, 1213
Tth111I GACNNNGTC 2 cut(s) 164, 274
VpaK11BI GGWCC 2 cut(s) 859, 1250
XapI RAATTY 1 cut(s) 1163
XmnI GAANNNNTTC 1 cut(s) 1202
XspI CTAG 4 cut(s) 293, 851, 927, 1046
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.