RLG00000016124

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000213
Physical Location & Seq
Forward (+)
4057966 .. 4059766
1801 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016124

Sequence Viewer

Length: 1299 bp
ATGTCCCCCAAAACCACTCTCAACCTAGCCAACAGATCCAGCGATGGCGAAGACGAACGGCGTCATCGGCTTCGACGCTGCCGTGAACCACCGCATCATAAGGCTGATAAGCACACGAAGTCTAAGAAGAAGAGAAGTGAGAAGTTGAAGTTGAACGAGGAAGAGGCTAACAAGTCTCTGTACATATGTCACATTGAGCACCACCCTGGAAGGTGGGTCGCTTATGTTGTCCGCGCCATCAACTTGTCCGATTTGTTGTTGTCATCAGAAGACGATGATGGTTTGCAATTACGGCAAGTGGGTTATAAGGCCGGGGATGAACTCCCCGGTTCTGTGGGTTGCGGTGTGTGGGGCTCCCGGATTGTTTTCGCCGCCGGCATGAAACCCTGCGGCCGTATGCCTTCATTTGATCGTCCCGACATAGTTTGGCATAGAGATGTTTACGCCTTTGAGACGGACCCCAACAAGCACAAGCAGCCTCGTGATAATAGTAGGATTACCAAGATGGGTGGCGCATTAGTTGAAGCCAAGTTTCTTCCTCTGATGGAGGAGGTGGGGGGCAAACTGTATGCACTTTCATATAGGCTGGTGGCTGATCCTCCCTCATTTGAGGTATTCGACCCGAAAGTGGGGAGTTGGGCGCCCCTGCCCCAGCCTCCATTCTTCAAACGTCAAGGTCAGTATAACCGCGGTGGCTTCCTCTCTTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGGAGAGATGTCCTGTCTTCTGTTTCGATGTAGCTCACCCAGACAGAGAATGGAGATTAGTCTCTTCTATGTGCCAACGCGGCCCTTTTCCTTTTGGAAACAAAGCTTTGGTCCTGGACCTGCCGGCGGGGGCTGACGACAAGAAGAAGATAATGTTTGCCTATAGTTTTGGTCGTTGGTATCTAGGAGTTTATCTTATGTCCTTGGAAGAAAATCAAGAATCTATCACCCGAATTGGTGATTTGAAGCTGCCAAGGTTGCCTCAGGAATATGAATTTGCAAAAAGATGTTATTTTGTCCATATAGGAGGTCAGAAAGCCTGCATTGTTGCCCCCGAATTGGTTAGGCCATATAAACAAGGACCTGATATTAACGAGGCTGGGACTCATAGGACACGGGGTATTGCCATACCATTTCAATTTGAAGTTGACATCACCAAGGTCAACAAGGACGAGAAGAATTGTTTGACTCTCCAATTCATGCCTACTCGTATCTTCGAATTCTATACCAACCCATCCACTTTTCCTGATCCTGAAGCGGAAGGTTGCTTTGTGCTATAA

Protein Analysis

433

Amino Acids

49.27

Weight (kDa)

8.88

Isoelectric Point (pI)

54.42

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 172 - 267 1.1e-11 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 306
Acc36I ACCTGC 1 cut(s) 867
AccB1I GGYRCC 2 cut(s) 640, 719
AccII CGCG 3 cut(s) 234, 690, 819
AclWI GGATC 3 cut(s) 30, 590, 1262
AcoI YGGCCR 1 cut(s) 391
AcsI RAATTY 2 cut(s) 1013, 1238
AcuI CTGAAG 1 cut(s) 1293
AcyI GRCGYC 2 cut(s) 61, 641
AfaI GTAC 1 cut(s) 182
AfiI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
AgsI TTSAA 7 cut(s) 148, 154, 524, 667, 985, 1157, 1163
AjnI CCWGG 2 cut(s) 205, 852
AluBI AGCT 3 cut(s) 773, 845, 988
AluI AGCT 3 cut(s) 773, 845, 988
Alw21I GWGCWC 1 cut(s) 201
Alw26I GTCTC 4 cut(s) 180, 446, 741, 805
AlwI GGATC 3 cut(s) 30, 590, 1262
AlwNI CAGNNNCTG 1 cut(s) 716
AoxI GGCC 4 cut(s) 309, 391, 820, 1085
ApeKI GCWGC 3 cut(s) 78, 475, 988
ApoI RAATTY 2 cut(s) 1013, 1238
ArsI GACNNNNNNTTYG 2 cut(s) 834, 866
AspLEI GCGC 3 cut(s) 236, 515, 643
AspS9I GGNCC 5 cut(s) 457, 821, 850, 856, 1100
AsuC2I CCSGG 3 cut(s) 313, 327, 358
AsuHPI GGTGA 4 cut(s) 767, 958, 989, 1165
AsuII TTCGAA 1 cut(s) 1236
AvaII GGWCC 4 cut(s) 457, 850, 856, 1100
AxyI CCTNAGG 1 cut(s) 1002
BanI GGYRCC 2 cut(s) 640, 719
BanII GRGCYC 1 cut(s) 356
BauI CACGAG 1 cut(s) 480
BbsI GAAGAC 3 cut(s) 57, 276, 748
Bbv12I GWGCWC 1 cut(s) 201
BbvI GCAGC 3 cut(s) 65, 487, 975
BccI CCATC 6 cut(s) 38, 245, 272, 499, 538, 1261
BceAI ACGGC 4 cut(s) 66, 74, 308, 378
BciT130I CCWGG 2 cut(s) 207, 854
BcnI CCSGG 3 cut(s) 313, 327, 358
BcoDI GTCTC 4 cut(s) 180, 446, 741, 805
BfaI CTAG 2 cut(s) 26, 923
BfmI CTRYAG 1 cut(s) 901
BfoI RGCGCY 1 cut(s) 644
BfuAI ACCTGC 1 cut(s) 867
BglI GCCNNNNNGGC 1 cut(s) 819
BisI GCNGC 6 cut(s) 79, 372, 391, 476, 820, 989
BlsI GCNGC 6 cut(s) 80, 373, 392, 477, 821, 990
Bme1390I CCNGG 5 cut(s) 207, 313, 327, 358, 854
Bme18I GGWCC 4 cut(s) 457, 850, 856, 1100
BmgT120I GGNCC 5 cut(s) 457, 821, 850, 856, 1100
BmiI GGNNCC 4 cut(s) 355, 459, 642, 721
BmrFI CCNGG 5 cut(s) 207, 313, 327, 358, 854
BmsI GCATC 1 cut(s) 103
BpiI GAAGAC 3 cut(s) 57, 276, 748
Bpu14I TTCGAA 1 cut(s) 1236
BpuMI CCSGG 3 cut(s) 313, 327, 358
BsaHI GRCGYC 2 cut(s) 61, 641
BsaJI CCNNGG 7 cut(s) 205, 312, 325, 688, 942, 992, 1176
Bsc4I CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
Bse118I RCCGGY 2 cut(s) 374, 862
Bse1I ACTGG 1 cut(s) 721
Bse21I CCTNAGG 1 cut(s) 1002
BseBI CCWGG 2 cut(s) 207, 854
BseDI CCNNGG 7 cut(s) 205, 312, 325, 688, 942, 992, 1176
BseGI GGATG 2 cut(s) 322, 1253
BseLI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
BseMII CTCAG 2 cut(s) 752, 1016
BseNI ACTGG 1 cut(s) 721
BseRI GAGGAG 1 cut(s) 563
BseX3I CGGCCG 1 cut(s) 391
BseXI GCAGC 3 cut(s) 65, 487, 975
BseYI CCCAGC 2 cut(s) 651, 1118
Bsh1236I CGCG 3 cut(s) 234, 690, 819
Bsh1285I CGRYCG 1 cut(s) 394
BshFI GGCC 4 cut(s) 311, 393, 822, 1087
BshNI GGYRCC 2 cut(s) 640, 719
BsiEI CGRYCG 1 cut(s) 394
BsiHKAI GWGCWC 1 cut(s) 201
BsiSI CCGG 5 cut(s) 312, 327, 358, 375, 863
BslFI GGGAC 2 cut(s) 399, 1135
BslI CCNNNNNNNGG 4 cut(s) 628, 629, 865, 1078
BsmAI GTCTC 4 cut(s) 180, 446, 741, 805
BsmBI CGTCTC 1 cut(s) 446
BsmFI GGGAC 2 cut(s) 399, 1135
BsnI GGCC 4 cut(s) 311, 393, 822, 1087
Bsp119I TTCGAA 1 cut(s) 1236
Bsp1286I GDGCHC 2 cut(s) 201, 356
Bsp1407I TGTACA 1 cut(s) 180
Bsp143I GATC 4 cut(s) 35, 409, 595, 1267
BspANI GGCC 4 cut(s) 311, 393, 822, 1087
BspCNI CTCAG 2 cut(s) 751, 1015
BspFNI CGCG 3 cut(s) 234, 690, 819
BspLI GGNNCC 4 cut(s) 355, 459, 642, 721
BspMI ACCTGC 1 cut(s) 867
BspPI GGATC 3 cut(s) 30, 590, 1262
BspT104I TTCGAA 1 cut(s) 1236
BspT107I GGYRCC 2 cut(s) 640, 719
BsrFI RCCGGY 2 cut(s) 374, 862
BsrGI TGTACA 1 cut(s) 180
BsrI ACTGG 1 cut(s) 721
BssAI RCCGGY 2 cut(s) 374, 862
BssECI CCNNGG 7 cut(s) 205, 312, 325, 688, 942, 992, 1176
BssMI GATC 4 cut(s) 35, 409, 595, 1267
BssNI GRCGYC 2 cut(s) 61, 641
BssSI CACGAG 1 cut(s) 480
BssT1I CCWWGG 3 cut(s) 942, 992, 1176
Bst2BI CACGAG 1 cut(s) 480
Bst2UI CCWGG 2 cut(s) 207, 854
Bst4CI ACNGT 1 cut(s) 567
Bst6I CTCTTC 3 cut(s) 125, 156, 808
BstACI GRCGYC 2 cut(s) 61, 641
BstAUI TGTACA 1 cut(s) 180
BstBI TTCGAA 1 cut(s) 1236
BstC8I GCNNGC 3 cut(s) 376, 864, 1060
BstDEI CTNAG 3 cut(s) 123, 738, 1002
BstDSI CCRYGG 1 cut(s) 688
BstF5I GGATG 2 cut(s) 322, 1253
BstFNI CGCG 3 cut(s) 234, 690, 819
BstH2I RGCGCY 1 cut(s) 644
BstHHI GCGC 3 cut(s) 236, 515, 643
BstKTI GATC 4 cut(s) 38, 412, 598, 1270
BstMAI GTCTC 4 cut(s) 180, 446, 741, 805
BstMBI GATC 4 cut(s) 35, 409, 595, 1267
BstMCI CGRYCG 1 cut(s) 394
BstMWI GCNNNNNNNGC 5 cut(s) 67, 292, 475, 819, 997
BstNI CCWGG 2 cut(s) 207, 854
BstSCI CCNGG 5 cut(s) 205, 311, 325, 356, 852
BstSFI CTRYAG 1 cut(s) 901
BstUI CGCG 3 cut(s) 234, 690, 819
BstV1I GCAGC 3 cut(s) 65, 487, 975
BstV2I GAAGAC 3 cut(s) 57, 276, 748
BstX2I RGATCY 1 cut(s) 35
BstYI RGATCY 1 cut(s) 35
BstZI CGGCCG 1 cut(s) 391
Bsu36I CCTNAGG 1 cut(s) 1002
BsuRI GGCC 4 cut(s) 311, 393, 822, 1087
BtgI CCRYGG 1 cut(s) 688
BtgZI GCGATG 1 cut(s) 57
BtsCI GGATG 2 cut(s) 322, 1253
BveI ACCTGC 1 cut(s) 867
Cac8I GCNNGC 3 cut(s) 376, 864, 1060
CaiI CAGNNNCTG 1 cut(s) 716
CfoI GCGC 3 cut(s) 236, 515, 643
Cfr10I RCCGGY 2 cut(s) 374, 862
Cfr13I GGNCC 5 cut(s) 457, 821, 850, 856, 1100
Cfr42I CCGCGG 1 cut(s) 691
CseI GACGC 2 cut(s) 50, 84
Csp6I GTAC 1 cut(s) 181
CspCI CAANNNNNGTGG 2 cut(s) 490, 525
CviAII CATG 2 cut(s) 379, 1219
CviQI GTAC 1 cut(s) 181
DdeI CTNAG 3 cut(s) 123, 738, 1002
DinI GGCGCC 1 cut(s) 642
DpnI GATC 4 cut(s) 37, 411, 597, 1269
DpnII GATC 4 cut(s) 35, 409, 595, 1267
EaeI YGGCCR 1 cut(s) 391
EagI CGGCCG 1 cut(s) 391
Eam1104I CTCTTC 3 cut(s) 125, 156, 808
EarI CTCTTC 3 cut(s) 125, 156, 808
EclXI CGGCCG 1 cut(s) 391
Eco130I CCWWGG 3 cut(s) 942, 992, 1176
Eco24I GRGCYC 1 cut(s) 356
Eco47I GGWCC 4 cut(s) 457, 850, 856, 1100
Eco52I CGGCCG 1 cut(s) 391
Eco57I CTGAAG 1 cut(s) 1293
Eco81I CCTNAGG 1 cut(s) 1002
EcoO109I RGGNCCY 1 cut(s) 1100
EcoRI GAATTC 1 cut(s) 1238
EcoRII CCWGG 2 cut(s) 205, 852
EcoT14I CCWWGG 3 cut(s) 942, 992, 1176
EcoT38I GRGCYC 1 cut(s) 356
EgeI GGCGCC 1 cut(s) 642
EheI GGCGCC 1 cut(s) 642
ErhI CCWWGG 3 cut(s) 942, 992, 1176
Esp3I CGTCTC 1 cut(s) 446
FaeI CATG 2 cut(s) 382, 1222
FaqI GGGAC 2 cut(s) 399, 1135
FatI CATG 2 cut(s) 378, 1218
FauI CCCGC 1 cut(s) 859
FauNDI CATATG 1 cut(s) 185
Fnu4HI GCNGC 6 cut(s) 79, 372, 391, 476, 820, 989
FokI GGATG 2 cut(s) 329, 1240
FriOI GRGCYC 1 cut(s) 356
Fsp4HI GCNGC 6 cut(s) 79, 372, 391, 476, 820, 989
FspBI CTAG 2 cut(s) 26, 923
GlaI GCGC 3 cut(s) 235, 514, 642
GluI GCNGC 6 cut(s) 79, 372, 391, 476, 820, 989
GsaI CCCAGC 2 cut(s) 655, 1122
HaeII RGCGCY 1 cut(s) 644
HaeIII GGCC 4 cut(s) 311, 393, 822, 1087
HapII CCGG 5 cut(s) 312, 327, 358, 375, 863
HgaI GACGC 2 cut(s) 50, 84
HhaI GCGC 3 cut(s) 236, 515, 643
Hin1I GRCGYC 2 cut(s) 61, 641
Hin1II CATG 2 cut(s) 382, 1222
Hin6I GCGC 3 cut(s) 234, 513, 641
HinP1I GCGC 3 cut(s) 234, 513, 641
HincII GTYRAC 2 cut(s) 1168, 1183
HindII GTYRAC 2 cut(s) 1168, 1183
HindIII AAGCTT 1 cut(s) 843
HinfI GANTC 3 cut(s) 959, 1123, 1207
HpaII CCGG 5 cut(s) 312, 327, 358, 375, 863
HphI GGTGA 4 cut(s) 767, 958, 989, 1165
Hpy166II GTNNAC 4 cut(s) 86, 442, 1168, 1183
Hpy188I TCNGA 4 cut(s) 250, 268, 543, 1053
Hpy188III TCNNGA 7 cut(s) 416, 482, 740, 956, 1004, 1265, 1271
Hpy8I GTNNAC 4 cut(s) 86, 442, 1168, 1183
Hpy99I CGWCG 1 cut(s) 78
HpyAV CCTTC 3 cut(s) 204, 411, 1274
HpyCH4III ACNGT 1 cut(s) 567
HpyCH4IV ACGT 1 cut(s) 670
HpyCH4V TGCA 5 cut(s) 286, 572, 710, 1019, 1062
HpyF10VI GCNNNNNNNGC 5 cut(s) 67, 292, 475, 819, 997
HpyF3I CTNAG 3 cut(s) 123, 738, 1002
HpySE526I ACGT 1 cut(s) 670
Hsp92I GRCGYC 2 cut(s) 61, 641
Hsp92II CATG 2 cut(s) 382, 1222
HspAI GCGC 3 cut(s) 234, 513, 641
KasI GGCGCC 1 cut(s) 640
KroI GCCGGC 2 cut(s) 374, 862
KroNI GCCGGC 2 cut(s) 376, 864
KspI CCGCGG 1 cut(s) 691
Kzo9I GATC 4 cut(s) 35, 409, 595, 1267
LmnI GCTCC 1 cut(s) 359
Lsp1109I GCAGC 3 cut(s) 65, 487, 975
LweI GCATC 1 cut(s) 103
MaeI CTAG 2 cut(s) 26, 923
MaeII ACGT 1 cut(s) 670
MaeIII GTNAC 2 cut(s) 188, 712
MalI GATC 4 cut(s) 37, 411, 597, 1269
MboI GATC 4 cut(s) 35, 409, 595, 1267
MflI RGATCY 1 cut(s) 35
MhlI GDGCHC 2 cut(s) 201, 356
MluCI AATT 8 cut(s) 287, 972, 1013, 1076, 1157, 1198, 1214, 1238
Mly113I GGCGCC 1 cut(s) 641
MlyI GAGTC 2 cut(s) 1117, 1201
MroNI GCCGGC 2 cut(s) 374, 862
MseI TTAA 1 cut(s) 1110
MslI CAYNNNNRTG 2 cut(s) 435, 725
MspA1I CMGCKG 1 cut(s) 690
MspI CCGG 5 cut(s) 312, 327, 358, 375, 863
MspR9I CCNGG 5 cut(s) 207, 313, 327, 358, 854
MvaI CCWGG 2 cut(s) 207, 854
MvnI CGCG 3 cut(s) 234, 690, 819
MwoI GCNNNNNNNGC 5 cut(s) 67, 292, 475, 819, 997
NaeI GCCGGC 2 cut(s) 376, 864
NarI GGCGCC 1 cut(s) 641
NciI CCSGG 3 cut(s) 313, 327, 358
NdeI CATATG 1 cut(s) 185
NdeII GATC 4 cut(s) 35, 409, 595, 1267
NgoMIV GCCGGC 2 cut(s) 374, 862
NlaIII CATG 2 cut(s) 382, 1222
NlaIV GGNNCC 4 cut(s) 355, 459, 642, 721
NmuCI GTSAC 1 cut(s) 188
NspV TTCGAA 1 cut(s) 1236
PcsI WCGNNNNNNNCGW 1 cut(s) 79
PdiI GCCGGC 2 cut(s) 376, 864
PfeI GAWTC 1 cut(s) 959
PfoI TCCNGGA 2 cut(s) 356, 852
PkrI GCNGC 6 cut(s) 80, 373, 392, 477, 821, 990
PleI GAGTC 2 cut(s) 1117, 1201
PluTI GGCGCC 1 cut(s) 644
PpsI GAGTC 2 cut(s) 1117, 1201
PpuMI RGGWCCY 1 cut(s) 1100
PsiI TTATAA 1 cut(s) 306
Psp5II RGGWCCY 1 cut(s) 1100
Psp6I CCWGG 2 cut(s) 205, 852
PspFI CCCAGC 2 cut(s) 651, 1118
PspGI CCWGG 2 cut(s) 205, 852
PspN4I GGNNCC 4 cut(s) 355, 459, 642, 721
PspPI GGNCC 5 cut(s) 457, 821, 850, 856, 1100
PspPPI RGGWCCY 1 cut(s) 1100
PstNI CAGNNNCTG 1 cut(s) 716
PsuI RGATCY 1 cut(s) 35
RsaI GTAC 1 cut(s) 182
RsaNI GTAC 1 cut(s) 181
RseI CAYNNNNRTG 2 cut(s) 435, 725
SacII CCGCGG 1 cut(s) 691
SaqAI TTAA 1 cut(s) 1110
SatI GCNGC 6 cut(s) 79, 372, 391, 476, 820, 989
Sau3AI GATC 4 cut(s) 35, 409, 595, 1267
Sau96I GGNCC 5 cut(s) 457, 821, 850, 856, 1100
SchI GAGTC 2 cut(s) 1117, 1201
ScrFI CCNGG 5 cut(s) 207, 313, 327, 358, 854
SduI GDGCHC 2 cut(s) 201, 356
SfaNI GCATC 1 cut(s) 103
SfcI CTRYAG 1 cut(s) 901
SfoI GGCGCC 1 cut(s) 642
Sfr303I CCGCGG 1 cut(s) 691
SfuI TTCGAA 1 cut(s) 1236
SgrBI CCGCGG 1 cut(s) 691
SinI GGWCC 4 cut(s) 457, 850, 856, 1100
SmiMI CAYNNNNRTG 2 cut(s) 435, 725
Sse9I AATT 8 cut(s) 287, 972, 1013, 1076, 1157, 1198, 1214, 1238
SspDI GGCGCC 1 cut(s) 640
SspMI CTAG 2 cut(s) 26, 923
StyD4I CCNGG 5 cut(s) 205, 311, 325, 356, 852
StyI CCWWGG 3 cut(s) 942, 992, 1176
TaaI ACNGT 1 cut(s) 567
TaiI ACGT 1 cut(s) 673
TaqI TCGA 4 cut(s) 73, 618, 765, 1236
TasI AATT 8 cut(s) 287, 972, 1013, 1076, 1157, 1198, 1214, 1238
TatI WGTACW 1 cut(s) 180
TauI GCSGC 3 cut(s) 374, 393, 822
TfiI GAWTC 1 cut(s) 959
Tru1I TTAA 1 cut(s) 1110
Tru9I TTAA 1 cut(s) 1110
TseFI GTSAC 1 cut(s) 188
TseI GCWGC 3 cut(s) 78, 475, 988
Tsp45I GTSAC 1 cut(s) 188
TspDTI ATGAA 6 cut(s) 333, 393, 395, 567, 1026, 1207
TspGWI ACGGA 1 cut(s) 470
VpaK11BI GGWCC 4 cut(s) 457, 850, 856, 1100
XapI RAATTY 2 cut(s) 1013, 1238
XcmI CCANNNNNNNNNTGG 1 cut(s) 786
XspI CTAG 2 cut(s) 26, 923
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.