FvH4_1g04981

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb1
OG0000213
Physical Location & Seq
Forward (+)
2650709 .. 2652014
1306 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_1g04981.t1

Sequence Viewer

Length: 1251 bp
ATGTCTCCCAAAAACACACTCAACGATGGTCACCGGCTTAGACGCTGCCGTGAACCACCGCGTAAGGCGAAGAAGAAGAGAAGTAAGAAGTTGAAGTTGAAAGAGTCGGAGGCTAATAAGTCTCTGTACATATGCCACATCGAATACCACCCTGAAAGGCGCGTCTCTTACGTTGTTCGTTCCATCAAATTGTCCGATTTGTTGTCATCAGATTCGGTTGATGGTTTGCAATTACAGCAGGTAGCTTACAAGGCCGCCGGGGATGGGGATGAAGAACTCCCCTCTCTTGTGGGTTGCGGTGTGTTGGGCTCCCAAATCGTTTTCGCCGCCGGCGTCACACCTGCCGCCCGCCTTTTCGCTGCACGCCTCCCCAACCCTGTTTGGCATAGAGATGTCTATGTCTATGAAACTGACCCCAACAAGCAGCCTAGTGATACTTCTGTGATTCAGAAGATGGATGCCAAATTGGTTCAAGGCAAACATGTTCCCGTGATGGTGGAGTTGGGTGGCAAACTGTATGCACTTTCGTATGATACGGTATCTGATCCTCCCTCCTTCGAGGTTTTCGATCCCACAATAGGGACTTGGTCTGCTTTACCGGAGCCTCCATTCTTCCAACAAAATGGTCAGTATCACCGCGGTGGCACCTTGTCCTATGCAGTTACTGGCACCAAGATGTTTGTGTCTCAGAGTAGATGTCCTGTCTTCTGCTTCGACGTAGCTCACCCTCGCAGAGAATGGAGGTTAGTCCATTCCATGTGCCAACGCGGCCCTTTCCCTTTTGTTAGCGGAGCTCTGGTCCTGGACCTCCCCGGTGACAACAACAATAACAAGAAGTTAATGTTTGCCTATGGCGGTACTCGTTGTTGGAATCTAGGAGCTTATATTATGTTTTTGGATAAAAATCGAGAATCTCTCACACAAATTGCTGACTTGAAGCTGCCAAGGTTGCCTGAGGAGTTTAAATTTGCAAAGAGATGTTTCCTCCTCCATATAGGAGGTCAGAAAGCCTGCCTCGTTGCCCCCTCAATGTGTCCCCCAGAGGAACAATTACCTAAATTTAATCAAGTTGGGAGTCATAAGACAAGGGGTGTTGCCATTCCGTTTCGATTTGAAGTTGATATCACCAAGATCGACAAGGACGCCAAGAATTGTTTGACTCTCCAGTTCATGCCTACTCGCATCTTCGAATTCTGTACCAACCCATCCACTTTTCCTAGTCCTCGAGCTCATGGTTGCTTTGTGCTGTAA

Protein Analysis

417

Amino Acids

46.76

Weight (kDa)

9.27

Isoelectric Point (pI)

53.88

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 155 - 250 1.6e-11 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 349
Acc36I ACCTGC 2 cut(s) 229, 349
AccB1I GGYRCC 2 cut(s) 644, 668
AccII CGCG 4 cut(s) 61, 162, 639, 768
AclWI GGATC 2 cut(s) 539, 563
AcsI RAATTY 3 cut(s) 965, 1058, 1190
AcyI GRCGYC 2 cut(s) 333, 1143
AfaI GTAC 3 cut(s) 128, 859, 1198
AfiI CCNNNNNNNGG 3 cut(s) 264, 578, 579
AflIII ACRYGT 1 cut(s) 481
AgsI TTSAA 5 cut(s) 94, 100, 473, 937, 1115
AjnI CCWGG 1 cut(s) 801
AleI CACNNNNGTG 1 cut(s) 639
AluBI AGCT 6 cut(s) 245, 722, 794, 881, 940, 1229
AluI AGCT 6 cut(s) 245, 722, 794, 881, 940, 1229
Alw21I GWGCWC 2 cut(s) 796, 1231
Alw26I GTCTC 4 cut(s) 9, 126, 169, 690
AlwI GGATC 2 cut(s) 539, 563
AlwNI CAGNNNCTG 1 cut(s) 665
Ama87I CYCGRG 1 cut(s) 1224
AoxI GGCC 2 cut(s) 252, 769
ApeKI GCWGC 4 cut(s) 45, 359, 424, 940
ApoI RAATTY 3 cut(s) 965, 1058, 1190
AspLEI GCGC 1 cut(s) 162
AspS9I GGNCC 3 cut(s) 770, 799, 805
AsuC2I CCSGG 2 cut(s) 259, 813
AsuHPI GGTGA 5 cut(s) 23, 626, 716, 827, 1117
AsuII TTCGAA 1 cut(s) 1188
AvaI CYCGRG 1 cut(s) 1224
AvaII GGWCC 2 cut(s) 799, 805
AxyI CCTNAGG 1 cut(s) 954
BaeI ACNNNNGTAYC 2 cut(s) 426, 459
BanI GGYRCC 2 cut(s) 644, 668
BanII GRGCYC 3 cut(s) 311, 796, 1231
BbsI GAAGAC 1 cut(s) 697
Bbv12I GWGCWC 2 cut(s) 796, 1231
BbvI GCAGC 4 cut(s) 32, 346, 436, 927
BccI CCATC 7 cut(s) 20, 191, 215, 257, 448, 487, 1213
BceAI ACGGC 1 cut(s) 33
BciT130I CCWGG 1 cut(s) 803
BcnI CCSGG 2 cut(s) 259, 813
BcoDI GTCTC 4 cut(s) 9, 126, 169, 690
BfaI CTAG 3 cut(s) 429, 875, 1218
BfuAI ACCTGC 2 cut(s) 229, 349
BglI GCCNNNNNGGC 1 cut(s) 768
BisI GCNGC 8 cut(s) 46, 255, 327, 345, 360, 425, 769, 941
BlsI GCNGC 8 cut(s) 47, 256, 328, 346, 361, 426, 770, 942
Bme1390I CCNGG 3 cut(s) 259, 803, 813
Bme18I GGWCC 2 cut(s) 799, 805
BmeT110I CYCGRG 1 cut(s) 1224
BmgT120I GGNCC 3 cut(s) 770, 799, 805
BmiI GGNNCC 4 cut(s) 310, 603, 646, 670
BmrFI CCNGG 3 cut(s) 259, 803, 813
BmsI GCATC 2 cut(s) 448, 1191
BpiI GAAGAC 1 cut(s) 697
BplI GAGNNNNNCTC 2 cut(s) 900, 932
BpmI CTGGAG 1 cut(s) 1148
Bpu14I TTCGAA 1 cut(s) 1188
BpuMI CCSGG 2 cut(s) 259, 813
BsaBI GATNNNNATC 1 cut(s) 903
BsaHI GRCGYC 2 cut(s) 333, 1143
BsaJI CCNNGG 4 cut(s) 258, 637, 811, 944
BsaWI WCCGGW 1 cut(s) 598
BsaXI ACNNNNNCTCC 2 cut(s) 783, 813
Bsc4I CCNNNNNNNGG 3 cut(s) 264, 578, 579
Bse118I RCCGGY 2 cut(s) 33, 329
Bse1I ACTGG 2 cut(s) 670, 1165
Bse21I CCTNAGG 1 cut(s) 954
Bse8I GATNNNNATC 1 cut(s) 903
BseBI CCWGG 1 cut(s) 803
BseDI CCNNGG 4 cut(s) 258, 637, 811, 944
BseGI GGATG 4 cut(s) 268, 274, 463, 1205
BseJI GATNNNNATC 1 cut(s) 903
BseLI CCNNNNNNNGG 3 cut(s) 264, 578, 579
BseMII CTCAG 2 cut(s) 701, 945
BseNI ACTGG 2 cut(s) 670, 1165
BseRI GAGGAG 2 cut(s) 971, 977
BseXI GCAGC 4 cut(s) 32, 346, 436, 927
BsgI GTGCAG 1 cut(s) 345
Bsh1236I CGCG 4 cut(s) 61, 162, 639, 768
BshFI GGCC 2 cut(s) 254, 771
BshNI GGYRCC 2 cut(s) 644, 668
BsiHKAI GWGCWC 2 cut(s) 796, 1231
BsiHKCI CYCGRG 1 cut(s) 1224
BsiSI CCGG 5 cut(s) 34, 258, 330, 599, 813
BslFI GGGAC 2 cut(s) 595, 1020
BslI CCNNNNNNNGG 3 cut(s) 264, 578, 579
BsmAI GTCTC 4 cut(s) 9, 126, 169, 690
BsmBI CGTCTC 1 cut(s) 169
BsmFI GGGAC 2 cut(s) 595, 1020
BsnI GGCC 2 cut(s) 254, 771
BsoBI CYCGRG 1 cut(s) 1224
Bsp119I TTCGAA 1 cut(s) 1188
Bsp1286I GDGCHC 3 cut(s) 311, 796, 1231
Bsp1407I TGTACA 1 cut(s) 126
Bsp143I GATC 3 cut(s) 544, 568, 1131
BspANI GGCC 2 cut(s) 254, 771
BspCNI CTCAG 2 cut(s) 700, 946
BspFNI CGCG 4 cut(s) 61, 162, 639, 768
BspLI GGNNCC 4 cut(s) 310, 603, 646, 670
BspMI ACCTGC 2 cut(s) 229, 349
BspPI GGATC 2 cut(s) 539, 563
BspT104I TTCGAA 1 cut(s) 1188
BspT107I GGYRCC 2 cut(s) 644, 668
BsrFI RCCGGY 2 cut(s) 33, 329
BsrGI TGTACA 1 cut(s) 126
BsrI ACTGG 2 cut(s) 670, 1165
BssAI RCCGGY 2 cut(s) 33, 329
BssECI CCNNGG 4 cut(s) 258, 637, 811, 944
BssMI GATC 3 cut(s) 544, 568, 1131
BssNI GRCGYC 2 cut(s) 333, 1143
BssT1I CCWWGG 1 cut(s) 944
Bst2UI CCWGG 1 cut(s) 803
Bst4CI ACNGT 2 cut(s) 516, 538
Bst6I CTCTTC 1 cut(s) 71
BstACI GRCGYC 2 cut(s) 333, 1143
BstAUI TGTACA 1 cut(s) 126
BstBI TTCGAA 1 cut(s) 1188
BstC8I GCNNGC 4 cut(s) 331, 349, 364, 1012
BstDEI CTNAG 3 cut(s) 38, 687, 954
BstDSI CCRYGG 1 cut(s) 637
BstEII GGTNACC 1 cut(s) 29
BstF5I GGATG 4 cut(s) 268, 274, 463, 1205
BstFNI CGCG 4 cut(s) 61, 162, 639, 768
BstHHI GCGC 1 cut(s) 162
BstKTI GATC 3 cut(s) 547, 571, 1134
BstMAI GTCTC 4 cut(s) 9, 126, 169, 690
BstMBI GATC 3 cut(s) 544, 568, 1131
BstMWI GCNNNNNNNGC 4 cut(s) 235, 251, 768, 949
BstNI CCWGG 1 cut(s) 803
BstNSI RCATGY 1 cut(s) 485
BstPI GGTNACC 1 cut(s) 29
BstSCI CCNGG 3 cut(s) 257, 801, 811
BstUI CGCG 4 cut(s) 61, 162, 639, 768
BstV1I GCAGC 4 cut(s) 32, 346, 436, 927
BstV2I GAAGAC 1 cut(s) 697
BstXI CCANNNNNNTGG 1 cut(s) 623
Bsu36I CCTNAGG 1 cut(s) 954
BsuRI GGCC 2 cut(s) 254, 771
BtgI CCRYGG 1 cut(s) 637
BtsCI GGATG 4 cut(s) 268, 274, 463, 1205
BveI ACCTGC 2 cut(s) 229, 349
Cac8I GCNNGC 4 cut(s) 331, 349, 364, 1012
CaiI CAGNNNCTG 1 cut(s) 665
CfoI GCGC 1 cut(s) 162
Cfr10I RCCGGY 2 cut(s) 33, 329
Cfr13I GGNCC 3 cut(s) 770, 799, 805
Cfr42I CCGCGG 1 cut(s) 640
CseI GACGC 4 cut(s) 51, 151, 322, 1151
Csp6I GTAC 3 cut(s) 127, 858, 1197
CviAII CATG 4 cut(s) 482, 757, 1171, 1232
CviQI GTAC 3 cut(s) 127, 858, 1197
DdeI CTNAG 3 cut(s) 38, 687, 954
DpnI GATC 3 cut(s) 546, 570, 1133
DpnII GATC 3 cut(s) 544, 568, 1131
DraI TTTAAA 1 cut(s) 964
Eam1104I CTCTTC 1 cut(s) 71
EarI CTCTTC 1 cut(s) 71
Ecl136II GAGCTC 2 cut(s) 794, 1229
Eco130I CCWWGG 1 cut(s) 944
Eco24I GRGCYC 3 cut(s) 311, 796, 1231
Eco32I GATATC 1 cut(s) 1123
Eco47I GGWCC 2 cut(s) 799, 805
Eco53kI GAGCTC 2 cut(s) 794, 1229
Eco81I CCTNAGG 1 cut(s) 954
Eco88I CYCGRG 1 cut(s) 1224
Eco91I GGTNACC 1 cut(s) 29
EcoICRI GAGCTC 2 cut(s) 794, 1229
EcoO65I GGTNACC 1 cut(s) 29
EcoRI GAATTC 1 cut(s) 1190
EcoRII CCWGG 1 cut(s) 801
EcoRV GATATC 1 cut(s) 1123
EcoT14I CCWWGG 1 cut(s) 944
EcoT38I GRGCYC 3 cut(s) 311, 796, 1231
ErhI CCWWGG 1 cut(s) 944
Esp3I CGTCTC 1 cut(s) 169
FaeI CATG 4 cut(s) 485, 760, 1174, 1235
FaqI GGGAC 2 cut(s) 595, 1020
FatI CATG 4 cut(s) 481, 756, 1170, 1231
FauI CCCGC 1 cut(s) 356
FauNDI CATATG 1 cut(s) 131
Fnu4HI GCNGC 8 cut(s) 46, 255, 327, 345, 360, 425, 769, 941
FokI GGATG 4 cut(s) 275, 281, 470, 1192
FriOI GRGCYC 3 cut(s) 311, 796, 1231
Fsp4HI GCNGC 8 cut(s) 46, 255, 327, 345, 360, 425, 769, 941
FspBI CTAG 3 cut(s) 429, 875, 1218
GlaI GCGC 1 cut(s) 161
GluI GCNGC 8 cut(s) 46, 255, 327, 345, 360, 425, 769, 941
GsuI CTGGAG 1 cut(s) 1148
HaeIII GGCC 2 cut(s) 254, 771
HapII CCGG 5 cut(s) 34, 258, 330, 599, 813
HgaI GACGC 4 cut(s) 51, 151, 322, 1151
HhaI GCGC 1 cut(s) 162
Hin1I GRCGYC 2 cut(s) 333, 1143
Hin1II CATG 4 cut(s) 485, 760, 1174, 1235
Hin6I GCGC 1 cut(s) 160
HinP1I GCGC 1 cut(s) 160
HinfI GANTC 7 cut(s) 104, 212, 445, 871, 911, 1075, 1159
HpaII CCGG 5 cut(s) 34, 258, 330, 599, 813
HphI GGTGA 5 cut(s) 23, 626, 716, 827, 1117
Hpy166II GTNNAC 1 cut(s) 53
Hpy188I TCNGA 7 cut(s) 109, 196, 211, 450, 544, 690, 1005
Hpy188III TCNNGA 1 cut(s) 908
Hpy8I GTNNAC 1 cut(s) 53
Hpy99I CGWCG 1 cut(s) 719
HpyAV CCTTC 1 cut(s) 565
HpyCH4III ACNGT 2 cut(s) 516, 538
HpyCH4IV ACGT 2 cut(s) 171, 717
HpyCH4V TGCA 5 cut(s) 229, 362, 521, 659, 971
HpyF10VI GCNNNNNNNGC 4 cut(s) 235, 251, 768, 949
HpyF3I CTNAG 3 cut(s) 38, 687, 954
HpySE526I ACGT 2 cut(s) 171, 717
Hsp92I GRCGYC 2 cut(s) 333, 1143
Hsp92II CATG 4 cut(s) 485, 760, 1174, 1235
HspAI GCGC 1 cut(s) 160
KroI GCCGGC 1 cut(s) 329
KroNI GCCGGC 1 cut(s) 331
KspI CCGCGG 1 cut(s) 640
Kzo9I GATC 3 cut(s) 544, 568, 1131
LmnI GCTCC 4 cut(s) 314, 601, 791, 878
Lsp1109I GCAGC 4 cut(s) 32, 346, 436, 927
LweI GCATC 2 cut(s) 448, 1191
MaeI CTAG 3 cut(s) 429, 875, 1218
MaeII ACGT 2 cut(s) 171, 717
MaeIII GTNAC 4 cut(s) 29, 334, 661, 815
MalI GATC 3 cut(s) 546, 570, 1133
MboI GATC 3 cut(s) 544, 568, 1131
MboII GAAGA 8 cut(s) 82, 85, 88, 284, 463, 604, 697, 1177
MhlI GDGCHC 3 cut(s) 311, 796, 1231
MluCI AATT 9 cut(s) 188, 230, 464, 924, 965, 1049, 1058, 1150, 1190
MlyI GAGTC 3 cut(s) 113, 1084, 1153
MmeI TCCRAC 3 cut(s) 87, 640, 848
MreI CGCCGGCG 1 cut(s) 329
MroNI GCCGGC 1 cut(s) 329
MseI TTAA 3 cut(s) 839, 963, 1062
MslI CAYNNNNRTG 3 cut(s) 390, 639, 674
MspA1I CMGCKG 1 cut(s) 639
MspI CCGG 5 cut(s) 34, 258, 330, 599, 813
MspR9I CCNGG 3 cut(s) 259, 803, 813
MvaI CCWGG 1 cut(s) 803
MvnI CGCG 4 cut(s) 61, 162, 639, 768
MwoI GCNNNNNNNGC 4 cut(s) 235, 251, 768, 949
NaeI GCCGGC 1 cut(s) 331
NciI CCSGG 2 cut(s) 259, 813
NdeI CATATG 1 cut(s) 131
NdeII GATC 3 cut(s) 544, 568, 1131
NgoMIV GCCGGC 1 cut(s) 329
NlaIII CATG 4 cut(s) 485, 760, 1174, 1235
NlaIV GGNNCC 4 cut(s) 310, 603, 646, 670
NmuCI GTSAC 3 cut(s) 29, 334, 815
NspI RCATGY 1 cut(s) 485
NspV TTCGAA 1 cut(s) 1188
OliI CACNNNNGTG 1 cut(s) 639
PaeR7I CTCGAG 1 cut(s) 1224
PaqCI CACCTGC 1 cut(s) 349
PciI ACATGT 1 cut(s) 481
PcsI WCGNNNNNNNCGW 2 cut(s) 330, 564
PdiI GCCGGC 1 cut(s) 331
PfeI GAWTC 4 cut(s) 212, 445, 871, 911
PflFI GACNNNGTC 1 cut(s) 586
PfoI TCCNGGA 1 cut(s) 801
PkrI GCNGC 8 cut(s) 47, 256, 328, 346, 361, 426, 770, 942
PleI GAGTC 3 cut(s) 112, 1083, 1153
PpsI GAGTC 3 cut(s) 112, 1083, 1153
PscI ACATGT 1 cut(s) 481
Psp124BI GAGCTC 2 cut(s) 796, 1231
Psp6I CCWGG 1 cut(s) 801
PspEI GGTNACC 1 cut(s) 29
PspGI CCWGG 1 cut(s) 801
PspN4I GGNNCC 4 cut(s) 310, 603, 646, 670
PspPI GGNCC 3 cut(s) 770, 799, 805
PspXI VCTCGAGB 1 cut(s) 1224
PstNI CAGNNNCTG 1 cut(s) 665
PsyI GACNNNGTC 1 cut(s) 586
RsaI GTAC 3 cut(s) 128, 859, 1198
RsaNI GTAC 3 cut(s) 127, 858, 1197
RseI CAYNNNNRTG 3 cut(s) 390, 639, 674
SacI GAGCTC 2 cut(s) 796, 1231
SacII CCGCGG 1 cut(s) 640
SaqAI TTAA 3 cut(s) 839, 963, 1062
SatI GCNGC 8 cut(s) 46, 255, 327, 345, 360, 425, 769, 941
Sau3AI GATC 3 cut(s) 544, 568, 1131
Sau96I GGNCC 3 cut(s) 770, 799, 805
SchI GAGTC 3 cut(s) 113, 1084, 1153
ScrFI CCNGG 3 cut(s) 259, 803, 813
SduI GDGCHC 3 cut(s) 311, 796, 1231
SfaNI GCATC 2 cut(s) 448, 1191
Sfr274I CTCGAG 1 cut(s) 1224
Sfr303I CCGCGG 1 cut(s) 640
SfuI TTCGAA 1 cut(s) 1188
SgrAI CRCCGGYG 1 cut(s) 329
SgrBI CCGCGG 1 cut(s) 640
SinI GGWCC 2 cut(s) 799, 805
SlaI CTCGAG 1 cut(s) 1224
SmiMI CAYNNNNRTG 3 cut(s) 390, 639, 674
SmlI CTYRAG 1 cut(s) 1224
SmoI CTYRAG 1 cut(s) 1224
Sse9I AATT 9 cut(s) 188, 230, 464, 924, 965, 1049, 1058, 1150, 1190
SspMI CTAG 3 cut(s) 429, 875, 1218
SstI GAGCTC 2 cut(s) 796, 1231
StyD4I CCNGG 3 cut(s) 257, 801, 811
StyI CCWWGG 1 cut(s) 944
TaaI ACNGT 2 cut(s) 516, 538
TaiI ACGT 2 cut(s) 174, 720
TaqI TCGA 9 cut(s) 141, 558, 567, 714, 907, 1108, 1134, 1188, 1225
TasI AATT 9 cut(s) 188, 230, 464, 924, 965, 1049, 1058, 1150, 1190
TatI WGTACW 1 cut(s) 126
TauI GCSGC 4 cut(s) 257, 329, 347, 771
TfiI GAWTC 4 cut(s) 212, 445, 871, 911
Tru1I TTAA 3 cut(s) 839, 963, 1062
Tru9I TTAA 3 cut(s) 839, 963, 1062
TseFI GTSAC 3 cut(s) 29, 334, 815
TseI GCWGC 4 cut(s) 45, 359, 424, 940
Tsp45I GTSAC 3 cut(s) 29, 334, 815
TspDTI ATGAA 3 cut(s) 285, 420, 1159
TspGWI ACGGA 1 cut(s) 1092
Tth111I GACNNNGTC 1 cut(s) 586
VpaK11BI GGWCC 2 cut(s) 799, 805
XapI RAATTY 3 cut(s) 965, 1058, 1190
XceI RCATGY 1 cut(s) 485
XhoI CTCGAG 1 cut(s) 1224
XspI CTAG 3 cut(s) 429, 875, 1218
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.