Rmu_sc0002986.1_g000070

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0002986.1
OG0000213
Physical Location & Seq
Reverse (-)
334658 .. 336082
1425 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0002986.1_g000070.1.cds

Sequence Viewer

Length: 1425 bp
atgaatcctatttcgaactgcagaaggagtagagtccacttccctctgagatcaggagttaaggctttcatgtataaatacacaaacaaggggccgaggaacccaaagcaaactgagaaaaaccaaacatttccaatgccccccaaaaccactctcaacctagccaacagatccagcgatcgggaagacgaacggcgtcatcggcttcgacgctgccgtgaaccaccgcatcataaggctgataagcacaggaagtctaagaagagaagtgagaagctgaagttgaacgaggaggaggctaacaagtctctgtacatatgtcacattgagcaccaccctggaaggtgggtcgcttatgttgtccgcgccatcaacttgtccgatttgttgtcatcatcagaagacgatgatggtttgcaattacggcaggtgggctataaggccggggatgaactcccgggttctgtgggttgcggtgtgtggggatctcggattgttctcgctgccggcatgaaaccctgcggccgtatgccttcatttgatcgtcccgacatagtttggcatagagatgtttacgcctttgaaactgaccccaacaagcagcctcgtgataatagtagaattaccaagatgggtggcacattagttgaagccaagtttcttcctctgatggaggaggtggggggcaaactgtatgcactttcatataggctggtggctgatcctccctcatttgaggtatttgacccgaaagtggggacttgggcacccctgccccagcctccattcttcaaacatcttggtcagtataaccgtggtggcttcctctcttatgcagttactggcaccaagatgtttgtgtctcaggcgagatgtcctgtgttctgtttcgatgtagctcacccagacagagaatggagattagtctcttctatgtgccaacgcggcccttttccttttgtaaacaaagctttggtcctggacctgccggcgggtgctgatgacaagaagaagataatgtttgcctatagttttggtcgttggtatctaggagtttatcttatgtccttggaagaaaatcaagaatcgatcacccgaattggtgattttcagctgccaaggttgcctcaggaatatgaatttgcacaaagatgttattttgtccatataggaggtcagaaagcctgcattgttgcccccgaattggttaggccatataaacaaggacctgatattaacgaggctgggactcataggacacagggtgttgccataccatttcaatttgaagttgatatcaccaaggtcgacaaggacgagaagaattgtttgaccctccaattcatgcctactcgtatcttcgaattctataccaacccgtccacttttcctgatcctgaagcaacaggttgctttgtgctataa

Protein Analysis

474

Amino Acids

54.25

Weight (kDa)

9.19

Isoelectric Point (pI)

52.25

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 418
Acc36I ACCTGC 2 cut(s) 418, 993
AccB1I GGYRCC 2 cut(s) 766, 845
AccI GTMKAC 1 cut(s) 1308
AccII CGCG 2 cut(s) 366, 945
AciI CCGC 6 cut(s) 227, 364, 474, 522, 945, 992
AclWI GGATC 4 cut(s) 165, 493, 716, 1388
AcoI YGGCCR 1 cut(s) 523
AcsI RAATTY 2 cut(s) 1139, 1364
AcuI CTGAAG 2 cut(s) 299, 1419
AcyI GRCGYC 1 cut(s) 196
AdeI CACNNNGTG 1 cut(s) 1265
AfaI GTAC 1 cut(s) 314
AfiI CCNNNNNNNGG 5 cut(s) 180, 754, 755, 991, 1204
AgsI TTSAA 6 cut(s) 286, 584, 650, 793, 1283, 1289
AjnI CCWGG 2 cut(s) 337, 978
AluBI AGCT 4 cut(s) 277, 899, 971, 1114
AluI AGCT 4 cut(s) 277, 899, 971, 1114
Alw21I GWGCWC 1 cut(s) 333
Alw26I GTCTC 3 cut(s) 312, 867, 931
AlwI GGATC 4 cut(s) 165, 493, 716, 1388
AlwNI CAGNNNCTG 1 cut(s) 842
Ama87I CYCGRG 1 cut(s) 457
AoxI GGCC 5 cut(s) 92, 441, 523, 946, 1211
ApeKI GCWGC 4 cut(s) 213, 503, 601, 1114
ApoI RAATTY 2 cut(s) 1139, 1364
ArsI GACNNNNNNTTYG 2 cut(s) 960, 992
AspLEI GCGC 1 cut(s) 368
AspS9I GGNCC 5 cut(s) 92, 947, 976, 982, 1226
AsuC2I CCSGG 3 cut(s) 445, 458, 459
AsuHPI GGTGA 4 cut(s) 893, 1084, 1115, 1291
AsuII TTCGAA 2 cut(s) 14, 1362
AvaI CYCGRG 1 cut(s) 457
AvaII GGWCC 3 cut(s) 976, 982, 1226
AxyI CCTNAGG 1 cut(s) 1128
BaeGI GKGCMC 1 cut(s) 769
BanI GGYRCC 2 cut(s) 766, 845
BauI CACGAG 1 cut(s) 606
BbsI GAAGAC 2 cut(s) 192, 408
Bbv12I GWGCWC 1 cut(s) 333
BbvI GCAGC 4 cut(s) 200, 490, 613, 1101
BccI CCATC 4 cut(s) 377, 404, 625, 664
BceAI ACGGC 4 cut(s) 201, 209, 440, 510
BciT130I CCWGG 2 cut(s) 339, 980
BcnI CCSGG 3 cut(s) 445, 458, 459
BcoDI GTCTC 3 cut(s) 312, 867, 931
BfaI CTAG 2 cut(s) 161, 1049
BfmI CTRYAG 2 cut(s) 19, 1027
BfuAI ACCTGC 2 cut(s) 418, 993
BglI GCCNNNNNGGC 1 cut(s) 945
BisI GCNGC 6 cut(s) 214, 504, 523, 602, 946, 1115
BlsI GCNGC 6 cut(s) 215, 505, 524, 603, 947, 1116
Bme1390I CCNGG 5 cut(s) 339, 445, 458, 459, 980
Bme18I GGWCC 3 cut(s) 976, 982, 1226
BmeT110I CYCGRG 1 cut(s) 457
BmgT120I GGNCC 5 cut(s) 92, 947, 976, 982, 1226
BmiI GGNNCC 4 cut(s) 93, 101, 768, 847
BmrFI CCNGG 5 cut(s) 339, 445, 458, 459, 980
BmsI GCATC 1 cut(s) 238
BpiI GAAGAC 2 cut(s) 192, 408
Bpu14I TTCGAA 2 cut(s) 14, 1362
BpuMI CCSGG 3 cut(s) 445, 458, 459
Bsa29I ATCGAT 1 cut(s) 1088
BsaHI GRCGYC 1 cut(s) 196
BsaJI CCNNGG 8 cut(s) 95, 337, 444, 457, 814, 1068, 1118, 1302
Bsc4I CCNNNNNNNGG 5 cut(s) 180, 754, 755, 991, 1204
Bse118I RCCGGY 2 cut(s) 506, 988
Bse1I ACTGG 1 cut(s) 847
Bse21I CCTNAGG 1 cut(s) 1128
BseBI CCWGG 2 cut(s) 339, 980
BseCI ATCGAT 1 cut(s) 1088
BseDI CCNNGG 8 cut(s) 95, 337, 444, 457, 814, 1068, 1118, 1302
BseGI GGATG 1 cut(s) 454
BseLI CCNNNNNNNGG 5 cut(s) 180, 754, 755, 991, 1204
BseMII CTCAG 4 cut(s) 38, 105, 878, 1142
BseNI ACTGG 1 cut(s) 847
BseRI GAGGAG 3 cut(s) 305, 308, 689
BseSI GKGCMC 1 cut(s) 769
BseX3I CGGCCG 1 cut(s) 523
BseXI GCAGC 4 cut(s) 200, 490, 613, 1101
BseYI CCCAGC 2 cut(s) 777, 1244
Bsh1236I CGCG 2 cut(s) 366, 945
Bsh1285I CGRYCG 2 cut(s) 181, 526
BshFI GGCC 5 cut(s) 94, 443, 525, 948, 1213
BshNI GGYRCC 2 cut(s) 766, 845
BshVI ATCGAT 1 cut(s) 1088
BsiEI CGRYCG 2 cut(s) 181, 526
BsiHKAI GWGCWC 1 cut(s) 333
BsiHKCI CYCGRG 1 cut(s) 457
BsiSI CCGG 4 cut(s) 444, 458, 507, 989
BslFI GGGAC 3 cut(s) 531, 772, 1261
BslI CCNNNNNNNGG 5 cut(s) 180, 754, 755, 991, 1204
BsmAI GTCTC 3 cut(s) 312, 867, 931
BsmFI GGGAC 3 cut(s) 531, 772, 1261
BsnI GGCC 5 cut(s) 94, 443, 525, 948, 1213
BsoBI CYCGRG 1 cut(s) 457
Bsp119I TTCGAA 2 cut(s) 14, 1362
Bsp1286I GDGCHC 2 cut(s) 333, 769
Bsp1407I TGTACA 1 cut(s) 312
Bsp143I GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
BspACI CCGC 6 cut(s) 227, 364, 474, 522, 945, 992
BspANI GGCC 5 cut(s) 94, 443, 525, 948, 1213
BspCNI CTCAG 4 cut(s) 39, 106, 877, 1141
BspDI ATCGAT 1 cut(s) 1088
BspFNI CGCG 2 cut(s) 366, 945
BspLI GGNNCC 4 cut(s) 93, 101, 768, 847
BspMAI CTGCAG 1 cut(s) 23
BspMI ACCTGC 2 cut(s) 418, 993
BspPI GGATC 4 cut(s) 165, 493, 716, 1388
BspT104I TTCGAA 2 cut(s) 14, 1362
BspT107I GGYRCC 2 cut(s) 766, 845
BsrFI RCCGGY 2 cut(s) 506, 988
BsrGI TGTACA 1 cut(s) 312
BsrI ACTGG 1 cut(s) 847
BssAI RCCGGY 2 cut(s) 506, 988
BssECI CCNNGG 8 cut(s) 95, 337, 444, 457, 814, 1068, 1118, 1302
BssMI GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
BssNI GRCGYC 1 cut(s) 196
BssSI CACGAG 1 cut(s) 606
BssT1I CCWWGG 3 cut(s) 1068, 1118, 1302
Bst2BI CACGAG 1 cut(s) 606
Bst2UI CCWGG 2 cut(s) 339, 980
Bst4CI ACNGT 2 cut(s) 693, 815
Bst6I CTCTTC 2 cut(s) 257, 934
BstACI GRCGYC 1 cut(s) 196
BstAUI TGTACA 1 cut(s) 312
BstBI TTCGAA 2 cut(s) 14, 1362
BstC8I GCNNGC 3 cut(s) 508, 990, 1186
BstDEI CTNAG 5 cut(s) 47, 114, 258, 864, 1128
BstDSI CCRYGG 1 cut(s) 814
BstF5I GGATG 1 cut(s) 454
BstFNI CGCG 2 cut(s) 366, 945
BstHHI GCGC 1 cut(s) 368
BstKTI GATC 8 cut(s) 53, 173, 181, 488, 544, 724, 1092, 1396
BstMAI GTCTC 3 cut(s) 312, 867, 931
BstMBI GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
BstMCI CGRYCG 2 cut(s) 181, 526
BstMWI GCNNNNNNNGC 4 cut(s) 202, 424, 945, 1123
BstNI CCWGG 2 cut(s) 339, 980
BstSCI CCNGG 5 cut(s) 337, 443, 456, 457, 978
BstSFI CTRYAG 2 cut(s) 19, 1027
BstSLI GKGCMC 1 cut(s) 769
BstUI CGCG 2 cut(s) 366, 945
BstV1I GCAGC 4 cut(s) 200, 490, 613, 1101
BstV2I GAAGAC 2 cut(s) 192, 408
BstX2I RGATCY 2 cut(s) 170, 485
BstYI RGATCY 2 cut(s) 170, 485
BstZI CGGCCG 1 cut(s) 523
Bsu15I ATCGAT 1 cut(s) 1088
Bsu36I CCTNAGG 1 cut(s) 1128
BsuRI GGCC 5 cut(s) 94, 443, 525, 948, 1213
BsuTUI ATCGAT 1 cut(s) 1088
BtgI CCRYGG 1 cut(s) 814
BtsCI GGATG 1 cut(s) 454
BveI ACCTGC 2 cut(s) 418, 993
Cac8I GCNNGC 3 cut(s) 508, 990, 1186
CaiI CAGNNNCTG 1 cut(s) 842
CfoI GCGC 1 cut(s) 368
Cfr10I RCCGGY 2 cut(s) 506, 988
Cfr13I GGNCC 5 cut(s) 92, 947, 976, 982, 1226
Cfr9I CCCGGG 1 cut(s) 457
ClaI ATCGAT 1 cut(s) 1088
CseI GACGC 2 cut(s) 185, 219
Csp6I GTAC 1 cut(s) 313
CspCI CAANNNNNGTGG 2 cut(s) 616, 651
CviAII CATG 3 cut(s) 70, 511, 1345
CviQI GTAC 1 cut(s) 313
DdeI CTNAG 5 cut(s) 47, 114, 258, 864, 1128
DpnI GATC 8 cut(s) 52, 172, 180, 487, 543, 723, 1091, 1395
DpnII GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
DraIII CACNNNGTG 1 cut(s) 1265
EaeI YGGCCR 1 cut(s) 523
EagI CGGCCG 1 cut(s) 523
Eam1104I CTCTTC 2 cut(s) 257, 934
EarI CTCTTC 2 cut(s) 257, 934
EclXI CGGCCG 1 cut(s) 523
Eco130I CCWWGG 3 cut(s) 1068, 1118, 1302
Eco32I GATATC 1 cut(s) 1297
Eco47I GGWCC 3 cut(s) 976, 982, 1226
Eco52I CGGCCG 1 cut(s) 523
Eco57I CTGAAG 2 cut(s) 299, 1419
Eco81I CCTNAGG 1 cut(s) 1128
Eco88I CYCGRG 1 cut(s) 457
EcoO109I RGGNCCY 1 cut(s) 1226
EcoRI GAATTC 1 cut(s) 1364
EcoRII CCWGG 2 cut(s) 337, 978
EcoRV GATATC 1 cut(s) 1297
EcoT14I CCWWGG 3 cut(s) 1068, 1118, 1302
ErhI CCWWGG 3 cut(s) 1068, 1118, 1302
FaeI CATG 3 cut(s) 73, 514, 1348
FaqI GGGAC 3 cut(s) 531, 772, 1261
FatI CATG 3 cut(s) 69, 510, 1344
FauI CCCGC 1 cut(s) 985
FauNDI CATATG 1 cut(s) 317
FblI GTMKAC 1 cut(s) 1308
Fnu4HI GCNGC 6 cut(s) 214, 504, 523, 602, 946, 1115
FokI GGATG 1 cut(s) 461
Fsp4HI GCNGC 6 cut(s) 214, 504, 523, 602, 946, 1115
FspBI CTAG 2 cut(s) 161, 1049
GlaI GCGC 1 cut(s) 367
GluI GCNGC 6 cut(s) 214, 504, 523, 602, 946, 1115
GsaI CCCAGC 2 cut(s) 781, 1248
HaeIII GGCC 5 cut(s) 94, 443, 525, 948, 1213
HapII CCGG 4 cut(s) 444, 458, 507, 989
HgaI GACGC 2 cut(s) 185, 219
HhaI GCGC 1 cut(s) 368
Hin1I GRCGYC 1 cut(s) 196
Hin1II CATG 3 cut(s) 73, 514, 1348
Hin6I GCGC 1 cut(s) 366
HinP1I GCGC 1 cut(s) 366
HincII GTYRAC 1 cut(s) 1309
HindII GTYRAC 1 cut(s) 1309
HindIII AAGCTT 1 cut(s) 969
HinfI GANTC 4 cut(s) 4, 33, 1085, 1249
HpaII CCGG 4 cut(s) 444, 458, 507, 989
HphI GGTGA 4 cut(s) 893, 1084, 1115, 1291
Hpy166II GTNNAC 6 cut(s) 37, 221, 574, 964, 1309, 1383
Hpy188I TCNGA 6 cut(s) 48, 382, 400, 492, 669, 1179
Hpy188III TCNNGA 8 cut(s) 54, 182, 548, 608, 1082, 1130, 1391, 1397
Hpy8I GTNNAC 6 cut(s) 37, 221, 574, 964, 1309, 1383
Hpy99I CGWCG 1 cut(s) 213
HpyAV CCTTC 3 cut(s) 18, 336, 543
HpyCH4III ACNGT 2 cut(s) 693, 815
HpyCH4V TGCA 6 cut(s) 21, 418, 698, 836, 1145, 1188
HpyF10VI GCNNNNNNNGC 4 cut(s) 202, 424, 945, 1123
HpyF3I CTNAG 5 cut(s) 47, 114, 258, 864, 1128
Hsp92I GRCGYC 1 cut(s) 196
Hsp92II CATG 3 cut(s) 73, 514, 1348
HspAI GCGC 1 cut(s) 366
KroI GCCGGC 2 cut(s) 506, 988
KroNI GCCGGC 2 cut(s) 508, 990
Kzo9I GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
Lsp1109I GCAGC 4 cut(s) 200, 490, 613, 1101
LweI GCATC 1 cut(s) 238
MaeI CTAG 2 cut(s) 161, 1049
MaeIII GTNAC 2 cut(s) 320, 838
MalI GATC 8 cut(s) 52, 172, 180, 487, 543, 723, 1091, 1395
MboI GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
MflI RGATCY 2 cut(s) 170, 485
MhlI GDGCHC 2 cut(s) 333, 769
MluCI AATT 9 cut(s) 419, 621, 1098, 1139, 1202, 1283, 1324, 1340, 1364
MlyI GAGTC 2 cut(s) 42, 1243
MroNI GCCGGC 2 cut(s) 506, 988
MseI TTAA 2 cut(s) 60, 1236
MslI CAYNNNNRTG 3 cut(s) 567, 851, 1150
MspA1I CMGCKG 1 cut(s) 1114
MspI CCGG 4 cut(s) 444, 458, 507, 989
MspR9I CCNGG 5 cut(s) 339, 445, 458, 459, 980
MvaI CCWGG 2 cut(s) 339, 980
MvnI CGCG 2 cut(s) 366, 945
MwoI GCNNNNNNNGC 4 cut(s) 202, 424, 945, 1123
NaeI GCCGGC 2 cut(s) 508, 990
NciI CCSGG 3 cut(s) 445, 458, 459
NdeI CATATG 1 cut(s) 317
NdeII GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
NgoMIV GCCGGC 2 cut(s) 506, 988
NlaIII CATG 3 cut(s) 73, 514, 1348
NlaIV GGNNCC 4 cut(s) 93, 101, 768, 847
NmeAIII GCCGAG 1 cut(s) 120
NmuCI GTSAC 1 cut(s) 320
NspV TTCGAA 2 cut(s) 14, 1362
PaqCI CACCTGC 1 cut(s) 418
PcsI WCGNNNNNNNCGW 2 cut(s) 214, 1314
PdiI GCCGGC 2 cut(s) 508, 990
PfeI GAWTC 2 cut(s) 4, 1085
PfoI TCCNGGA 1 cut(s) 978
PkrI GCNGC 6 cut(s) 215, 505, 524, 603, 947, 1116
Ple19I CGATCG 1 cut(s) 181
PleI GAGTC 2 cut(s) 41, 1243
PpsI GAGTC 2 cut(s) 41, 1243
PpuMI RGGWCCY 1 cut(s) 1226
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 2 cut(s) 337, 978
PspFI CCCAGC 2 cut(s) 777, 1244
PspGI CCWGG 2 cut(s) 337, 978
PspN4I GGNNCC 4 cut(s) 93, 101, 768, 847
PspPI GGNCC 5 cut(s) 92, 947, 976, 982, 1226
PspPPI RGGWCCY 1 cut(s) 1226
PstI CTGCAG 1 cut(s) 23
PstNI CAGNNNCTG 1 cut(s) 842
PsuI RGATCY 2 cut(s) 170, 485
PvuI CGATCG 1 cut(s) 181
PvuII CAGCTG 1 cut(s) 1114
RsaI GTAC 1 cut(s) 314
RsaNI GTAC 1 cut(s) 313
RseI CAYNNNNRTG 3 cut(s) 567, 851, 1150
SalI GTCGAC 1 cut(s) 1307
SaqAI TTAA 2 cut(s) 60, 1236
SatI GCNGC 6 cut(s) 214, 504, 523, 602, 946, 1115
Sau3AI GATC 8 cut(s) 50, 170, 178, 485, 541, 721, 1089, 1393
Sau96I GGNCC 5 cut(s) 92, 947, 976, 982, 1226
SchI GAGTC 2 cut(s) 42, 1243
ScrFI CCNGG 5 cut(s) 339, 445, 458, 459, 980
SduI GDGCHC 2 cut(s) 333, 769
SfaNI GCATC 1 cut(s) 238
SfcI CTRYAG 2 cut(s) 19, 1027
SfuI TTCGAA 2 cut(s) 14, 1362
SinI GGWCC 3 cut(s) 976, 982, 1226
SmaI CCCGGG 1 cut(s) 459
SmiMI CAYNNNNRTG 3 cut(s) 567, 851, 1150
Sse9I AATT 9 cut(s) 419, 621, 1098, 1139, 1202, 1283, 1324, 1340, 1364
SsiI CCGC 6 cut(s) 227, 364, 474, 522, 945, 992
SspMI CTAG 2 cut(s) 161, 1049
StyD4I CCNGG 5 cut(s) 337, 443, 456, 457, 978
StyI CCWWGG 3 cut(s) 1068, 1118, 1302
TaaI ACNGT 2 cut(s) 693, 815
TaqI TCGA 6 cut(s) 14, 208, 891, 1088, 1308, 1362
TasI AATT 9 cut(s) 419, 621, 1098, 1139, 1202, 1283, 1324, 1340, 1364
TatI WGTACW 1 cut(s) 312
TauI GCSGC 2 cut(s) 525, 948
TfiI GAWTC 2 cut(s) 4, 1085
Tru1I TTAA 2 cut(s) 60, 1236
Tru9I TTAA 2 cut(s) 60, 1236
TseFI GTSAC 1 cut(s) 320
TseI GCWGC 4 cut(s) 213, 503, 601, 1114
Tsp45I GTSAC 1 cut(s) 320
TspDTI ATGAA 8 cut(s) 17, 58, 465, 525, 527, 693, 1152, 1333
TspMI CCCGGG 1 cut(s) 457
VpaK11BI GGWCC 3 cut(s) 976, 982, 1226
XapI RAATTY 2 cut(s) 1139, 1364
XcmI CCANNNNNNNNNTGG 1 cut(s) 912
XmaI CCCGGG 1 cut(s) 457
XmiI GTMKAC 1 cut(s) 1308
XspI CTAG 2 cut(s) 161, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.