RLG00000019065

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000213
Physical Location & Seq
Reverse (-)
45876456 .. 45878331
1876 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000019065

Sequence Viewer

Length: 1476 bp
ATGTCTGTATATAAATACATCCAGAGGCCTAAACAAACGAACCAGAAAGAAAAATTGGCAAATCAAAAAACCATGTCCCCCAAAAGATATCTTACCCTAGGCAACGGCAACGGCAACGGCGAAGAGGAGAGGCATCATCGTCGCCGGCATCGGCATGACCATGTACATCGGCATGGGCATCGGCATGACGGTGGACATTGGCACAAGTCGCATGAGCATAGGCGTGATGGATGGGAGCCGATGAAGAAGCAGAGGGTGGAGAAGGTGAAGAAGACATCGAAGAAGTTAACGTTTGAGTTGGAGGAGGAGGCTGCTAACAAGTCACTCTACATATGTTTCCTGGAACACAGGAGAGATTGGGTTGCTTATGTTATCCGCGCCATCAAATTGTCCGATTTGTTATCATCCGGCGAGCGATTGAGATTACGGCAAGTGGGTTTTAAGGCCGGGGATCATCTCCCCGGAACTGTAGGTTCCGGTGTTATGGGCTCCCAAATTCTTTTAGCGGGCGGCTTGAGACCCAACATCCCTTATGGCTTTGGGGCACATCGTCATGACTCAGCTGTTTGGCATAGAAATGTTTATTCCTTTGAAACTGACCCCAACAAGTGGCCTCATGATAATAGTACAATCAGGAAGCTTGATGCCACTTTACAAGCAGCCAAGTTGAGCCCTATGATGGTGGAGCTAGGGGGCAAACTGTACGCTCTTTCCTATAGGCTGGTCGGTGATCCTCCTTCATTTGAGGTATTTGATCCCAAAATGGGGACTTGGTCTGCTCTGCCACAGCCCCCATTTTTCGAACCTGGCTCTCGATATTACGAACATGCTCCCTTCTCTTATGCAATTGCCGGCACCAAGATGTTTGTCTCCCATAAAAAATGTCCCGTGTTCTGCTTTGACGTTGCCCACCCAGATAGAGAATGGAGAATAGTCCCTACTATGTGTCAAGGCGGCCCTTTTCCATTTTCTCATAAATCTTTAGTCCTGGACCTGCCGGAACCTGACAAGAAGATAGTGTTTGCCTATAGTCACGAACGTTGGTGTCTAGGAGTTTATCTTATGTCGTTGTGTGAAAACCAAGAATCTATCACACGAATTGGTGACTTGAAGCTGCCGCAGTTGCCACATGAATTGGGTGAAGCAAGAGGTTGTGATTTTGTCCACATAGGAGGTCGGAAAGCCTGCATTGTTGTCCCCGAATTGGAGCTTCCATTTGATGAAGGACCTAAACAGGAGCTCGGGACTCATAAGACATGGGGGGTTGCCATACCGTTCCAATTTGAAGTTGATATCACTAAGCTGGACAAGGACAAGAAAGATTGTTTCAGCCTCCAATTCATGCCTATTCGCATCTTCGAATTTCATACCACCCCATCCACTCTTCCATTCCCTGAAACGGTTGGTAGCTATCTGCTCTTTAAAGGATTGGTGTGTATCAATGTGTCTGTTTTCAGAGGACAGAAGCTTACTTAA

Protein Analysis

492

Amino Acids

56.34

Weight (kDa)

9.23

Isoelectric Point (pI)

46.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 218 - 351 1e-10 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 1002
AccB1I GGYRCC 1 cut(s) 854
AccB7I CCANNNNNTGG 1 cut(s) 609
AccII CGCG 1 cut(s) 378
AciI CCGC 5 cut(s) 376, 506, 510, 954, 1118
AclI AACGTT 2 cut(s) 290, 1039
AclWI GGATC 3 cut(s) 459, 725, 749
AcsI RAATTY 2 cut(s) 495, 1361
AfaI GTAC 3 cut(s) 165, 628, 704
AfiI CCNNNNNNNGG 6 cut(s) 609, 679, 764, 765, 1204, 1399
AgsI TTSAA 3 cut(s) 593, 1111, 1286
AjnI CCWGG 3 cut(s) 339, 805, 987
AjuI GAANNNNNNNTTGG 2 cut(s) 38, 70
AluBI AGCT 9 cut(s) 563, 640, 688, 1114, 1210, 1240, 1303, 1410, 1468
AluI AGCT 9 cut(s) 563, 640, 688, 1114, 1210, 1240, 1303, 1410, 1468
Alw21I GWGCWC 1 cut(s) 1242
Alw26I GTCTC 2 cut(s) 511, 874
AlwI GGATC 3 cut(s) 459, 725, 749
Ama87I CYCGRG 1 cut(s) 1241
AoxI GGCC 4 cut(s) 26, 444, 611, 955
ApeKI GCWGC 3 cut(s) 311, 659, 1114
ApoI RAATTY 2 cut(s) 495, 1361
AspA2I CCTAGG 1 cut(s) 97
AspLEI GCGC 1 cut(s) 380
AspS9I GGNCC 3 cut(s) 956, 991, 1226
AsuC2I CCSGG 2 cut(s) 448, 462
AsuHPI GGTGA 4 cut(s) 277, 740, 1115, 1151
AsuII TTCGAA 2 cut(s) 801, 1359
AvaI CYCGRG 1 cut(s) 1241
AvaII GGWCC 2 cut(s) 991, 1226
AvrII CCTAGG 1 cut(s) 97
BaeGI GKGCMC 1 cut(s) 547
BanI GGYRCC 1 cut(s) 854
BanII GRGCYC 3 cut(s) 491, 674, 1242
BbsI GAAGAC 1 cut(s) 278
Bbv12I GWGCWC 1 cut(s) 1242
BbvI GCAGC 3 cut(s) 298, 671, 1101
BccI CCATC 5 cut(s) 221, 225, 389, 673, 1384
BceAI ACGGC 4 cut(s) 121, 127, 133, 443
BcgI CGANNNNNNTGC 4 cut(s) 122, 156, 161, 195
BciT130I CCWGG 3 cut(s) 341, 807, 989
BcnI CCSGG 2 cut(s) 448, 462
BcoDI GTCTC 2 cut(s) 511, 874
BfaI CTAG 3 cut(s) 98, 689, 1049
BfmI CTRYAG 3 cut(s) 468, 715, 1027
BfuAI ACCTGC 1 cut(s) 1002
BisI GCNGC 6 cut(s) 312, 511, 660, 955, 1115, 1118
BlnI CCTAGG 1 cut(s) 97
BlsI GCNGC 6 cut(s) 313, 512, 661, 956, 1116, 1119
Bme1390I CCNGG 5 cut(s) 341, 448, 462, 807, 989
Bme18I GGWCC 2 cut(s) 991, 1226
BmeT110I CYCGRG 1 cut(s) 1241
BmgT120I GGNCC 3 cut(s) 956, 991, 1226
BmiI GGNNCC 5 cut(s) 237, 475, 490, 856, 1002
BmrFI CCNGG 5 cut(s) 341, 448, 462, 807, 989
BmsI GCATC 5 cut(s) 142, 157, 187, 634, 1362
BpiI GAAGAC 1 cut(s) 278
Bpu14I TTCGAA 2 cut(s) 801, 1359
BpuEI CTTGAG 1 cut(s) 535
BpuMI CCSGG 2 cut(s) 448, 462
BsaI GGTCTC 1 cut(s) 511
BsaJI CCNNGG 3 cut(s) 97, 447, 460
BsaWI WCCGGW 1 cut(s) 476
Bsc4I CCNNNNNNNGG 6 cut(s) 609, 679, 764, 765, 1204, 1399
Bse118I RCCGGY 2 cut(s) 144, 851
BseBI CCWGG 3 cut(s) 341, 807, 989
BseDI CCNNGG 3 cut(s) 97, 447, 460
BseGI GGATG 5 cut(s) 18, 236, 404, 525, 1376
BseLI CCNNNNNNNGG 6 cut(s) 609, 679, 764, 765, 1204, 1399
BseMII CTCAG 1 cut(s) 573
BseRI GAGGAG 3 cut(s) 140, 317, 320
BseSI GKGCMC 1 cut(s) 547
BseXI GCAGC 3 cut(s) 298, 671, 1101
Bsh1236I CGCG 1 cut(s) 378
BshFI GGCC 4 cut(s) 28, 446, 613, 957
BshNI GGYRCC 1 cut(s) 854
BsiHKAI GWGCWC 1 cut(s) 1242
BsiHKCI CYCGRG 1 cut(s) 1241
BsiSI CCGG 7 cut(s) 145, 408, 447, 462, 477, 852, 998
BslFI GGGAC 6 cut(s) 61, 781, 870, 920, 1181, 1258
BslI CCNNNNNNNGG 6 cut(s) 609, 679, 764, 765, 1204, 1399
BsmAI GTCTC 2 cut(s) 511, 874
BsmFI GGGAC 6 cut(s) 61, 781, 870, 920, 1181, 1258
BsnI GGCC 4 cut(s) 28, 446, 613, 957
Bso31I GGTCTC 1 cut(s) 511
BsoBI CYCGRG 1 cut(s) 1241
Bsp119I TTCGAA 2 cut(s) 801, 1359
Bsp1286I GDGCHC 4 cut(s) 491, 547, 674, 1242
Bsp1407I TGTACA 1 cut(s) 163
Bsp143I GATC 3 cut(s) 451, 730, 754
BspACI CCGC 5 cut(s) 376, 506, 510, 954, 1118
BspANI GGCC 4 cut(s) 28, 446, 613, 957
BspCNI CTCAG 1 cut(s) 572
BspFNI CGCG 1 cut(s) 378
BspHI TCATGA 2 cut(s) 553, 616
BspLI GGNNCC 5 cut(s) 237, 475, 490, 856, 1002
BspMI ACCTGC 1 cut(s) 1002
BspPI GGATC 3 cut(s) 459, 725, 749
BspT104I TTCGAA 2 cut(s) 801, 1359
BspT107I GGYRCC 1 cut(s) 854
BspTNI GGTCTC 1 cut(s) 511
BsrFI RCCGGY 2 cut(s) 144, 851
BsrGI TGTACA 1 cut(s) 163
BssAI RCCGGY 2 cut(s) 144, 851
BssECI CCNNGG 3 cut(s) 97, 447, 460
BssMI GATC 3 cut(s) 451, 730, 754
BssT1I CCWWGG 1 cut(s) 97
Bst2UI CCWGG 3 cut(s) 341, 807, 989
Bst4CI ACNGT 5 cut(s) 191, 469, 702, 1275, 1402
Bst6I CTCTTC 2 cut(s) 117, 1389
BstAUI TGTACA 1 cut(s) 163
BstBI TTCGAA 2 cut(s) 801, 1359
BstC8I GCNNGC 5 cut(s) 146, 413, 508, 853, 1186
BstDEI CTNAG 2 cut(s) 559, 1299
BstF5I GGATG 5 cut(s) 18, 236, 404, 525, 1376
BstFNI CGCG 1 cut(s) 378
BstHHI GCGC 1 cut(s) 380
BstKTI GATC 3 cut(s) 454, 733, 757
BstMAI GTCTC 2 cut(s) 511, 874
BstMBI GATC 3 cut(s) 451, 730, 754
BstMWI GCNNNNNNNGC 2 cut(s) 208, 1123
BstNI CCWGG 3 cut(s) 341, 807, 989
BstNSI RCATGY 1 cut(s) 830
BstSCI CCNGG 5 cut(s) 339, 446, 460, 805, 987
BstSFI CTRYAG 3 cut(s) 468, 715, 1027
BstSLI GKGCMC 1 cut(s) 547
BstUI CGCG 1 cut(s) 378
BstV1I GCAGC 3 cut(s) 298, 671, 1101
BstV2I GAAGAC 1 cut(s) 278
BsuRI GGCC 4 cut(s) 28, 446, 613, 957
BtsCI GGATG 5 cut(s) 18, 236, 404, 525, 1376
BveI ACCTGC 1 cut(s) 1002
Cac8I GCNNGC 5 cut(s) 146, 413, 508, 853, 1186
CciI TCATGA 2 cut(s) 553, 616
CfoI GCGC 1 cut(s) 380
Cfr10I RCCGGY 2 cut(s) 144, 851
Cfr13I GGNCC 3 cut(s) 956, 991, 1226
Csp6I GTAC 3 cut(s) 164, 627, 703
CspCI CAANNNNNGTGG 2 cut(s) 1116, 1151
CviQI GTAC 3 cut(s) 164, 627, 703
DdeI CTNAG 2 cut(s) 559, 1299
DpnI GATC 3 cut(s) 453, 732, 756
DpnII GATC 3 cut(s) 451, 730, 754
DraI TTTAAA 1 cut(s) 1423
Eam1104I CTCTTC 2 cut(s) 117, 1389
EarI CTCTTC 2 cut(s) 117, 1389
Ecl136II GAGCTC 1 cut(s) 1240
Eco130I CCWWGG 1 cut(s) 97
Eco147I AGGCCT 1 cut(s) 28
Eco24I GRGCYC 3 cut(s) 491, 674, 1242
Eco31I GGTCTC 1 cut(s) 511
Eco32I GATATC 2 cut(s) 89, 1294
Eco47I GGWCC 2 cut(s) 991, 1226
Eco53kI GAGCTC 1 cut(s) 1240
Eco88I CYCGRG 1 cut(s) 1241
EcoICRI GAGCTC 1 cut(s) 1240
EcoO109I RGGNCCY 1 cut(s) 1226
EcoRII CCWGG 3 cut(s) 339, 805, 987
EcoRV GATATC 2 cut(s) 89, 1294
EcoT14I CCWWGG 1 cut(s) 97
EcoT38I GRGCYC 3 cut(s) 491, 674, 1242
ErhI CCWWGG 1 cut(s) 97
FaqI GGGAC 6 cut(s) 61, 781, 870, 920, 1181, 1258
FauI CCCGC 1 cut(s) 499
FauNDI CATATG 1 cut(s) 332
Fnu4HI GCNGC 6 cut(s) 312, 511, 660, 955, 1115, 1118
FokI GGATG 5 cut(s) 5, 243, 391, 512, 1363
FriOI GRGCYC 3 cut(s) 491, 674, 1242
Fsp4HI GCNGC 6 cut(s) 312, 511, 660, 955, 1115, 1118
FspBI CTAG 3 cut(s) 98, 689, 1049
GlaI GCGC 1 cut(s) 379
GluI GCNGC 6 cut(s) 312, 511, 660, 955, 1115, 1118
HaeIII GGCC 4 cut(s) 28, 446, 613, 957
HapII CCGG 7 cut(s) 145, 408, 447, 462, 477, 852, 998
HhaI GCGC 1 cut(s) 380
Hin6I GCGC 1 cut(s) 378
HinP1I GCGC 1 cut(s) 378
HincII GTYRAC 1 cut(s) 288
HindII GTYRAC 1 cut(s) 288
HindIII AAGCTT 2 cut(s) 638, 1466
HinfI GANTC 3 cut(s) 557, 1085, 1246
HpaI GTTAAC 1 cut(s) 288
HpaII CCGG 7 cut(s) 145, 408, 447, 462, 477, 852, 998
HphI GGTGA 4 cut(s) 277, 740, 1115, 1151
Hpy166II GTNNAC 3 cut(s) 194, 288, 1165
Hpy188I TCNGA 3 cut(s) 394, 1179, 1457
Hpy188III TCNNGA 7 cut(s) 22, 554, 617, 634, 813, 1034, 1243
Hpy8I GTNNAC 3 cut(s) 194, 288, 1165
Hpy99I CGWCG 1 cut(s) 144
HpyAV CCTTC 4 cut(s) 256, 747, 844, 1217
HpyCH4III ACNGT 5 cut(s) 191, 469, 702, 1275, 1402
HpyCH4IV ACGT 3 cut(s) 290, 903, 1039
HpyCH4V TGCA 2 cut(s) 845, 1188
HpyF10VI GCNNNNNNNGC 2 cut(s) 208, 1123
HpyF3I CTNAG 2 cut(s) 559, 1299
HpySE526I ACGT 3 cut(s) 290, 903, 1039
HspAI GCGC 1 cut(s) 378
KroI GCCGGC 2 cut(s) 144, 851
KroNI GCCGGC 2 cut(s) 146, 853
KspAI GTTAAC 1 cut(s) 288
Kzo9I GATC 3 cut(s) 451, 730, 754
LmnI GCTCC 6 cut(s) 235, 494, 685, 835, 1207, 1237
Lsp1109I GCAGC 3 cut(s) 298, 671, 1101
LweI GCATC 5 cut(s) 142, 157, 187, 634, 1362
MaeI CTAG 3 cut(s) 98, 689, 1049
MaeII ACGT 3 cut(s) 290, 903, 1039
MaeIII GTNAC 3 cut(s) 321, 1031, 1103
MalI GATC 3 cut(s) 453, 732, 756
MboI GATC 3 cut(s) 451, 730, 754
MboII GAAGA 8 cut(s) 134, 256, 280, 283, 292, 1024, 1348, 1376
MfeI CAATTG 1 cut(s) 846
MhlI GDGCHC 4 cut(s) 491, 547, 674, 1242
MlyI GAGTC 2 cut(s) 551, 1240
MmeI TCCRAC 2 cut(s) 279, 1157
MroNI GCCGGC 2 cut(s) 144, 851
MseI TTAA 4 cut(s) 287, 441, 1422, 1474
MslI CAYNNNNRTG 9 cut(s) 153, 159, 171, 183, 189, 222, 552, 576, 860
MspA1I CMGCKG 1 cut(s) 563
MspI CCGG 7 cut(s) 145, 408, 447, 462, 477, 852, 998
MspR9I CCNGG 5 cut(s) 341, 448, 462, 807, 989
MunI CAATTG 1 cut(s) 846
MvaI CCWGG 3 cut(s) 341, 807, 989
MvnI CGCG 1 cut(s) 378
MwoI GCNNNNNNNGC 2 cut(s) 208, 1123
NaeI GCCGGC 2 cut(s) 146, 853
NciI CCSGG 2 cut(s) 448, 462
NdeI CATATG 1 cut(s) 332
NdeII GATC 3 cut(s) 451, 730, 754
NgoMIV GCCGGC 2 cut(s) 144, 851
NlaIV GGNNCC 5 cut(s) 237, 475, 490, 856, 1002
NmuCI GTSAC 3 cut(s) 321, 1031, 1103
NspI RCATGY 1 cut(s) 830
NspV TTCGAA 2 cut(s) 801, 1359
PagI TCATGA 2 cut(s) 553, 616
PceI AGGCCT 1 cut(s) 28
PcsI WCGNNNNNNNCGW 1 cut(s) 117
PdiI GCCGGC 2 cut(s) 146, 853
PfeI GAWTC 1 cut(s) 1085
PflFI GACNNNGTC 1 cut(s) 772
PflMI CCANNNNNTGG 1 cut(s) 609
PfoI TCCNGGA 2 cut(s) 339, 987
PkrI GCNGC 6 cut(s) 313, 512, 661, 956, 1116, 1119
PleI GAGTC 2 cut(s) 551, 1240
PpsI GAGTC 2 cut(s) 551, 1240
PpuMI RGGWCCY 1 cut(s) 1226
Psp124BI GAGCTC 1 cut(s) 1242
Psp1406I AACGTT 2 cut(s) 290, 1039
Psp5II RGGWCCY 1 cut(s) 1226
Psp6I CCWGG 3 cut(s) 339, 805, 987
PspGI CCWGG 3 cut(s) 339, 805, 987
PspN4I GGNNCC 5 cut(s) 237, 475, 490, 856, 1002
PspPI GGNCC 3 cut(s) 956, 991, 1226
PspPPI RGGWCCY 1 cut(s) 1226
PsyI GACNNNGTC 1 cut(s) 772
PvuII CAGCTG 1 cut(s) 563
RsaI GTAC 3 cut(s) 165, 628, 704
RsaNI GTAC 3 cut(s) 164, 627, 703
RseI CAYNNNNRTG 9 cut(s) 153, 159, 171, 183, 189, 222, 552, 576, 860
SacI GAGCTC 1 cut(s) 1242
SaqAI TTAA 4 cut(s) 287, 441, 1422, 1474
SatI GCNGC 6 cut(s) 312, 511, 660, 955, 1115, 1118
Sau3AI GATC 3 cut(s) 451, 730, 754
Sau96I GGNCC 3 cut(s) 956, 991, 1226
SchI GAGTC 2 cut(s) 551, 1240
ScrFI CCNGG 5 cut(s) 341, 448, 462, 807, 989
SduI GDGCHC 4 cut(s) 491, 547, 674, 1242
SfaNI GCATC 5 cut(s) 142, 157, 187, 634, 1362
SfcI CTRYAG 3 cut(s) 468, 715, 1027
SfuI TTCGAA 2 cut(s) 801, 1359
SinI GGWCC 2 cut(s) 991, 1226
SmiMI CAYNNNNRTG 9 cut(s) 153, 159, 171, 183, 189, 222, 552, 576, 860
SmlI CTYRAG 1 cut(s) 514
SmoI CTYRAG 1 cut(s) 514
SseBI AGGCCT 1 cut(s) 28
SsiI CCGC 5 cut(s) 376, 506, 510, 954, 1118
SspMI CTAG 3 cut(s) 98, 689, 1049
SstI GAGCTC 1 cut(s) 1242
StuI AGGCCT 1 cut(s) 28
StyD4I CCNGG 5 cut(s) 339, 446, 460, 805, 987
StyI CCWWGG 1 cut(s) 97
TaaI ACNGT 5 cut(s) 191, 469, 702, 1275, 1402
TaiI ACGT 3 cut(s) 293, 906, 1042
TaqI TCGA 4 cut(s) 278, 801, 814, 1359
TatI WGTACW 2 cut(s) 163, 626
TauI GCSGC 3 cut(s) 513, 957, 1120
TfiI GAWTC 1 cut(s) 1085
Tru1I TTAA 4 cut(s) 287, 441, 1422, 1474
Tru9I TTAA 4 cut(s) 287, 441, 1422, 1474
TseFI GTSAC 3 cut(s) 321, 1031, 1103
TseI GCWGC 3 cut(s) 311, 659, 1114
Tsp45I GTSAC 3 cut(s) 321, 1031, 1103
TspDTI ATGAA 6 cut(s) 257, 729, 1146, 1236, 1330, 1355
Tth111I GACNNNGTC 1 cut(s) 772
Van91I CCANNNNNTGG 1 cut(s) 609
VpaK11BI GGWCC 2 cut(s) 991, 1226
XapI RAATTY 2 cut(s) 495, 1361
XceI RCATGY 1 cut(s) 830
XcmI CCANNNNNNNNNTGG 1 cut(s) 921
XmaJI CCTAGG 1 cut(s) 97
XspI CTAG 3 cut(s) 98, 689, 1049
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.