RLG00000016071

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
OG0000213
Physical Location & Seq
Forward (+)
3673816 .. 3675625
1810 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000016071

Sequence Viewer

Length: 1389 bp
ATGGCCCCCAGAAAACCTCATAACCTAGCCTCCGCCACCAGCAATGGCGAAGAGGAGACGCACCATCATCGGCGTCGGCCTTGCAGTGTACATCATGGGCAGAAGTCTCATGAGCATGATATGAAGAAGAAGAAGAAGAAGAAGAAGAAGGAGAAGAAGAACAGCCAAGGGACAGAGAAGGTGAAGAAGAAGAAACTGAAATTGAATGAGGTGGAGGGTAATAAGTCACTCTACATGTGCACCATTGAATACCAAGAGGGAGAACGAGCGGCTTATGCTGTGCGGTGCATTAAACTATCAGATCTCTTATGCTCATCAGATGATGATCCAGTGCAATTGCGCCAAGTGGCTTATGCCTCTGGGGATCATCTCCCCGCTTCCATCGGTGGCGGTGTTTTCGGCTCCCAGATTATTTTCGCCGGTGGCGTGAAACCCAGCTTCCCTATAATTTCATTACTTCGTTCCGACTTAGTTTGGCATAGAGATGTTTATGCCTTCGAAACTGACCCCAACAAGCAGCAGCAGCCTCATGATATTACCAAGATGGATGCCACTCTACTACAAGCCAAGTTTTACCCTCTAATCGTGGAGCTTGGCGGGAAACTCTACGCTCTTTCCGGTTTGCGGGTCTCCGATCCGCCTTCATTTGAGGTATTTGACCCCAATGTGGGCAGGTGGGCAGCTTTGCCTGAACCTCCATTCTTCCAAATTGGCTCTCGATATTGGGAAGATGCCGAATTCTCTTATGCAATTACGGGCACCAAGATCTTTGCCTCCCATGAAAAATGTCCAGTGTTCTGCTTTGACGTCGCCCACCCAGACAGAGAATGGAGACTGGTCTCTACTATGTGCCAACGCCGCCCTTTTCCCTTCTGGCACGAATCTCTAGTCCTTGACCTGCCGGAGGATGACAAGAAGAAGTTACTGTTTGCCTATACTAATGATCGGCGTCTAGGAGTTTATATTCTGTCCTTGGATGAAAATCAAGAGTCTATCACACAAATTGGTGATTGGAAGATCCCTTCGTGGCCTTATGAATTTGGTTACTTATCAGCATGTAGTATTGTGCACATTGGAGGTCAGAAAGCATGCTTTGTTATCACCCGGTTGGGCGTCCCAAGTGAATACAAAGCTGAATATGAGCCTGGGACTCATAAGACGTGGGGAATTGCCATACCATTTCAATTTGACCTTGATATCACCAAGGTGGACAAGGACAAGAAGAATTGTTTCACCCTCCAATTCATGTCTCTTCGCATCTTCGAGTACCATACCAACCCATCCAGTTTTCCTGAACCTGGACCGGATGGAAGCTTAATTGTGACTGTTATGTTTGCACATCCAAGAGTTGAAAGGCTTCACCTTCTGCCATCAAACTTGTTCAGTTAA

Protein Analysis

463

Amino Acids

52.69

Weight (kDa)

8.36

Isoelectric Point (pI)

46.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
DUF1668 PF07893 185 - 279 4.3e-09 Protein of unknown function (DUF1668)
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 663
AatII GACGTC 1 cut(s) 810
Acc36I ACCTGC 2 cut(s) 663, 906
AccB1I GGYRCC 1 cut(s) 758
AccBSI CCGCTC 1 cut(s) 269
AciI CCGC 9 cut(s) 33, 269, 283, 375, 390, 597, 625, 638, 859
AclWI GGATC 4 cut(s) 320, 372, 629, 1012
AcsI RAATTY 2 cut(s) 737, 1037
AcyI GRCGYC 4 cut(s) 73, 807, 949, 1113
AfaI GTAC 2 cut(s) 90, 1268
AfiI CCNNNNNNNGG 5 cut(s) 624, 667, 668, 904, 1298
AflIII ACRYGT 1 cut(s) 234
AgsI TTSAA 4 cut(s) 205, 248, 1184, 1352
AjiI CACGTC 1 cut(s) 1161
AjnI CCWGG 2 cut(s) 1144, 1297
AleI CACNNNNGTG 1 cut(s) 1205
AluBI AGCT 5 cut(s) 438, 592, 683, 1133, 1314
AluI AGCT 5 cut(s) 438, 592, 683, 1133, 1314
Alw21I GWGCWC 2 cut(s) 242, 1071
Alw26I GTCTC 6 cut(s) 50, 111, 634, 826, 844, 1254
Alw44I GTGCAC 2 cut(s) 238, 1067
AlwI GGATC 4 cut(s) 320, 372, 629, 1012
AoxI GGCC 3 cut(s) 3, 77, 1028
ApaLI GTGCAC 2 cut(s) 238, 1067
ApeKI GCWGC 4 cut(s) 517, 520, 523, 680
ApoI RAATTY 2 cut(s) 737, 1037
ArsI GACNNNNNNTTYG 2 cut(s) 873, 905
Asp700I GAANNNNTTC 2 cut(s) 1229, 1356
AspLEI GCGC 1 cut(s) 342
AspS9I GGNCC 2 cut(s) 4, 1301
AsuC2I CCSGG 1 cut(s) 1105
AsuHPI GGTGA 6 cut(s) 193, 1019, 1093, 1192, 1225, 1352
AsuII TTCGAA 1 cut(s) 498
AvaII GGWCC 1 cut(s) 1301
BaeGI GKGCMC 3 cut(s) 242, 761, 1071
BanI GGYRCC 1 cut(s) 758
Bbv12I GWGCWC 2 cut(s) 242, 1071
BbvI GCAGC 4 cut(s) 529, 532, 535, 692
BccI CCATC 6 cut(s) 72, 389, 538, 1288, 1301, 1378
BcgI CGANNNNNNTGC 2 cut(s) 50, 84
BciT130I CCWGG 2 cut(s) 1146, 1299
BcnI CCSGG 1 cut(s) 1105
BcoDI GTCTC 6 cut(s) 50, 111, 634, 826, 844, 1254
BfaI CTAG 3 cut(s) 26, 887, 953
BfuAI ACCTGC 2 cut(s) 663, 906
BglII AGATCT 2 cut(s) 301, 765
BisI GCNGC 6 cut(s) 270, 518, 521, 524, 681, 859
BlsI GCNGC 6 cut(s) 271, 519, 522, 525, 682, 860
Bme1390I CCNGG 3 cut(s) 1105, 1146, 1299
Bme18I GGWCC 1 cut(s) 1301
BmgBI CACGTC 1 cut(s) 1161
BmgT120I GGNCC 2 cut(s) 4, 1301
BmiI GGNNCC 3 cut(s) 6, 403, 760
BmrFI CCNGG 3 cut(s) 1105, 1146, 1299
BmsI GCATC 3 cut(s) 538, 721, 1266
Bpu14I TTCGAA 1 cut(s) 498
BpuMI CCSGG 1 cut(s) 1105
BsaBI GATNNNNATC 2 cut(s) 324, 981
BsaHI GRCGYC 4 cut(s) 73, 807, 949, 1113
BsaI GGTCTC 2 cut(s) 634, 844
BsaJI CCNNGG 4 cut(s) 166, 972, 1145, 1203
BsaWI WCCGGW 2 cut(s) 617, 1303
BsaXI ACNNNNNCTCC 2 cut(s) 14, 44
Bsc4I CCNNNNNNNGG 5 cut(s) 624, 667, 668, 904, 1298
Bse118I RCCGGY 1 cut(s) 419
Bse1I ACTGG 4 cut(s) 329, 791, 840, 1284
Bse3DI GCAATG 1 cut(s) 49
Bse8I GATNNNNATC 2 cut(s) 324, 981
BseBI CCWGG 2 cut(s) 1146, 1299
BseDI CCNNGG 4 cut(s) 166, 972, 1145, 1203
BseGI GGATG 6 cut(s) 553, 913, 982, 1280, 1312, 1339
BseJI GATNNNNATC 2 cut(s) 324, 981
BseLI CCNNNNNNNGG 5 cut(s) 624, 667, 668, 904, 1298
BseMI GCAATG 1 cut(s) 49
BseNI ACTGG 4 cut(s) 329, 791, 840, 1284
BseRI GAGGAG 1 cut(s) 68
BseSI GKGCMC 3 cut(s) 242, 761, 1071
BseXI GCAGC 4 cut(s) 529, 532, 535, 692
BseYI CCCAGC 1 cut(s) 434
BshFI GGCC 3 cut(s) 5, 79, 1030
BshNI GGYRCC 1 cut(s) 758
BsiHKAI GWGCWC 2 cut(s) 242, 1071
BsiSI CCGG 5 cut(s) 420, 618, 902, 1105, 1304
BslFI GGGAC 3 cut(s) 184, 1100, 1162
BslI CCNNNNNNNGG 5 cut(s) 624, 667, 668, 904, 1298
BsmAI GTCTC 6 cut(s) 50, 111, 634, 826, 844, 1254
BsmBI CGTCTC 1 cut(s) 50
BsmFI GGGAC 3 cut(s) 184, 1100, 1162
BsnI GGCC 3 cut(s) 5, 79, 1030
Bso31I GGTCTC 2 cut(s) 634, 844
Bsp119I TTCGAA 1 cut(s) 498
Bsp1286I GDGCHC 3 cut(s) 242, 761, 1071
Bsp1407I TGTACA 1 cut(s) 88
Bsp143I GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
BspACI CCGC 9 cut(s) 33, 269, 283, 375, 390, 597, 625, 638, 859
BspANI GGCC 3 cut(s) 5, 79, 1030
BspHI TCATGA 2 cut(s) 109, 529
BspLI GGNNCC 3 cut(s) 6, 403, 760
BspMI ACCTGC 2 cut(s) 663, 906
BspPI GGATC 4 cut(s) 320, 372, 629, 1012
BspT104I TTCGAA 1 cut(s) 498
BspT107I GGYRCC 1 cut(s) 758
BspTNI GGTCTC 2 cut(s) 634, 844
BsrBI CCGCTC 1 cut(s) 269
BsrDI GCAATG 1 cut(s) 49
BsrFI RCCGGY 1 cut(s) 419
BsrGI TGTACA 1 cut(s) 88
BsrI ACTGG 4 cut(s) 329, 791, 840, 1284
BssAI RCCGGY 1 cut(s) 419
BssECI CCNNGG 4 cut(s) 166, 972, 1145, 1203
BssMI GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
BssNI GRCGYC 4 cut(s) 73, 807, 949, 1113
BssT1I CCWWGG 3 cut(s) 166, 972, 1203
Bst2UI CCWGG 2 cut(s) 1146, 1299
Bst4CI ACNGT 2 cut(s) 927, 1327
Bst6I CTCTTC 2 cut(s) 45, 1257
BstACI GRCGYC 4 cut(s) 73, 807, 949, 1113
BstAUI TGTACA 1 cut(s) 88
BstBI TTCGAA 1 cut(s) 498
BstC8I GCNNGC 1 cut(s) 1090
BstDEI CTNAG 1 cut(s) 469
BstENI CCTNNNNNAGG 1 cut(s) 902
BstF5I GGATG 6 cut(s) 553, 913, 982, 1280, 1312, 1339
BstHHI GCGC 1 cut(s) 342
BstKTI GATC 7 cut(s) 304, 328, 367, 637, 768, 946, 1020
BstMAI GTCTC 6 cut(s) 50, 111, 634, 826, 844, 1254
BstMBI GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
BstMWI GCNNNNNNNGC 3 cut(s) 275, 523, 858
BstNI CCWGG 2 cut(s) 1146, 1299
BstNSI RCATGY 3 cut(s) 238, 1059, 1092
BstSCI CCNGG 3 cut(s) 1103, 1144, 1297
BstSLI GKGCMC 3 cut(s) 242, 761, 1071
BstV1I GCAGC 4 cut(s) 529, 532, 535, 692
BstX2I RGATCY 3 cut(s) 301, 765, 1017
BstYI RGATCY 3 cut(s) 301, 765, 1017
BsuRI GGCC 3 cut(s) 5, 79, 1030
BtrI CACGTC 1 cut(s) 1161
BtsCI GGATG 6 cut(s) 553, 913, 982, 1280, 1312, 1339
BtsI GCAGTG 1 cut(s) 91
BtsIMutI CAGTG 3 cut(s) 91, 336, 798
BveI ACCTGC 2 cut(s) 663, 906
Cac8I GCNNGC 1 cut(s) 1090
CciI TCATGA 2 cut(s) 109, 529
CfoI GCGC 1 cut(s) 342
Cfr10I RCCGGY 1 cut(s) 419
Cfr13I GGNCC 2 cut(s) 4, 1301
CseI GACGC 4 cut(s) 62, 67, 938, 1102
Csp6I GTAC 2 cut(s) 89, 1267
CviAII CATG 9 cut(s) 95, 110, 116, 235, 530, 779, 1056, 1089, 1246
CviQI GTAC 2 cut(s) 89, 1267
DdeI CTNAG 1 cut(s) 469
DpnI GATC 7 cut(s) 303, 327, 366, 636, 767, 945, 1019
DpnII GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
Eam1104I CTCTTC 2 cut(s) 45, 1257
EarI CTCTTC 2 cut(s) 45, 1257
EciI GGCGGA 2 cut(s) 22, 627
Eco130I CCWWGG 3 cut(s) 166, 972, 1203
Eco31I GGTCTC 2 cut(s) 634, 844
Eco32I GATATC 1 cut(s) 1198
Eco47I GGWCC 1 cut(s) 1301
EcoNI CCTNNNNNAGG 1 cut(s) 902
EcoRI GAATTC 1 cut(s) 737
EcoRII CCWGG 2 cut(s) 1144, 1297
EcoRV GATATC 1 cut(s) 1198
EcoT14I CCWWGG 3 cut(s) 166, 972, 1203
ErhI CCWWGG 3 cut(s) 166, 972, 1203
Esp3I CGTCTC 1 cut(s) 50
FaeI CATG 9 cut(s) 98, 113, 119, 238, 533, 782, 1059, 1092, 1249
FaqI GGGAC 3 cut(s) 184, 1100, 1162
FatI CATG 9 cut(s) 94, 109, 115, 234, 529, 778, 1055, 1088, 1245
FauI CCCGC 3 cut(s) 382, 590, 618
Fnu4HI GCNGC 6 cut(s) 270, 518, 521, 524, 681, 859
FokI GGATG 6 cut(s) 560, 920, 989, 1267, 1319, 1326
Fsp4HI GCNGC 6 cut(s) 270, 518, 521, 524, 681, 859
FspBI CTAG 3 cut(s) 26, 887, 953
GlaI GCGC 1 cut(s) 341
GluI GCNGC 6 cut(s) 270, 518, 521, 524, 681, 859
GsaI CCCAGC 1 cut(s) 438
HaeIII GGCC 3 cut(s) 5, 79, 1030
HapII CCGG 5 cut(s) 420, 618, 902, 1105, 1304
HgaI GACGC 4 cut(s) 62, 67, 938, 1102
HhaI GCGC 1 cut(s) 342
Hin1I GRCGYC 4 cut(s) 73, 807, 949, 1113
Hin1II CATG 9 cut(s) 98, 113, 119, 238, 533, 782, 1059, 1092, 1249
Hin6I GCGC 1 cut(s) 340
HinP1I GCGC 1 cut(s) 340
HindIII AAGCTT 1 cut(s) 1312
HinfI GANTC 3 cut(s) 881, 989, 1150
HpaII CCGG 5 cut(s) 420, 618, 902, 1105, 1304
HphI GGTGA 6 cut(s) 193, 1019, 1093, 1192, 1225, 1352
Hpy166II GTNNAC 4 cut(s) 89, 240, 1069, 1210
Hpy188I TCNGA 5 cut(s) 301, 319, 466, 634, 1083
Hpy188III TCNNGA 5 cut(s) 110, 530, 717, 986, 1292
Hpy8I GTNNAC 4 cut(s) 89, 240, 1069, 1210
Hpy99I CGWCG 2 cut(s) 78, 812
HpyAV CCTTC 7 cut(s) 142, 172, 505, 651, 880, 1032, 1373
HpyCH4III ACNGT 2 cut(s) 927, 1327
HpyCH4IV ACGT 2 cut(s) 807, 1160
HpyCH4V TGCA 7 cut(s) 84, 240, 288, 334, 749, 1069, 1337
HpyF10VI GCNNNNNNNGC 3 cut(s) 275, 523, 858
HpyF3I CTNAG 1 cut(s) 469
HpySE526I ACGT 2 cut(s) 807, 1160
Hsp92I GRCGYC 4 cut(s) 73, 807, 949, 1113
Hsp92II CATG 9 cut(s) 98, 113, 119, 238, 533, 782, 1059, 1092, 1249
HspAI GCGC 1 cut(s) 340
Kzo9I GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
LmnI GCTCC 2 cut(s) 407, 589
Lsp1109I GCAGC 4 cut(s) 529, 532, 535, 692
LweI GCATC 3 cut(s) 538, 721, 1266
MaeI CTAG 3 cut(s) 26, 887, 953
MaeII ACGT 2 cut(s) 807, 1160
MaeIII GTNAC 4 cut(s) 225, 921, 1043, 1321
MalI GATC 7 cut(s) 303, 327, 366, 636, 767, 945, 1019
MbiI CCGCTC 1 cut(s) 269
MboI GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
MfeI CAATTG 1 cut(s) 335
MflI RGATCY 3 cut(s) 301, 765, 1017
MhlI GDGCHC 3 cut(s) 242, 761, 1071
MlyI GAGTC 2 cut(s) 998, 1144
MmeI TCCRAC 1 cut(s) 489
MroXI GAANNNNTTC 2 cut(s) 1229, 1356
MseI TTAA 3 cut(s) 291, 1316, 1387
MslI CAYNNNNRTG 3 cut(s) 114, 483, 1205
MspI CCGG 5 cut(s) 420, 618, 902, 1105, 1304
MspR9I CCNGG 3 cut(s) 1105, 1146, 1299
MunI CAATTG 1 cut(s) 335
MvaI CCWGG 2 cut(s) 1146, 1299
MwoI GCNNNNNNNGC 3 cut(s) 275, 523, 858
NciI CCSGG 1 cut(s) 1105
NdeII GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
NlaIII CATG 9 cut(s) 98, 113, 119, 238, 533, 782, 1059, 1092, 1249
NlaIV GGNNCC 3 cut(s) 6, 403, 760
NmuCI GTSAC 2 cut(s) 225, 1321
NspI RCATGY 3 cut(s) 238, 1059, 1092
NspV TTCGAA 1 cut(s) 498
OliI CACNNNNGTG 1 cut(s) 1205
PaeI GCATGC 1 cut(s) 1092
PagI TCATGA 2 cut(s) 109, 529
PaqCI CACCTGC 1 cut(s) 663
PciI ACATGT 1 cut(s) 234
PcsI WCGNNNNNNNCGW 1 cut(s) 423
PdmI GAANNNNTTC 2 cut(s) 1229, 1356
PfeI GAWTC 1 cut(s) 881
PkrI GCNGC 6 cut(s) 271, 519, 522, 525, 682, 860
PleI GAGTC 2 cut(s) 997, 1144
PpsI GAGTC 2 cut(s) 997, 1144
PscI ACATGT 1 cut(s) 234
Psp6I CCWGG 2 cut(s) 1144, 1297
PspFI CCCAGC 1 cut(s) 434
PspGI CCWGG 2 cut(s) 1144, 1297
PspN4I GGNNCC 3 cut(s) 6, 403, 760
PspPI GGNCC 2 cut(s) 4, 1301
PsuI RGATCY 3 cut(s) 301, 765, 1017
RsaI GTAC 2 cut(s) 90, 1268
RsaNI GTAC 2 cut(s) 89, 1267
RseI CAYNNNNRTG 3 cut(s) 114, 483, 1205
SaqAI TTAA 3 cut(s) 291, 1316, 1387
SatI GCNGC 6 cut(s) 270, 518, 521, 524, 681, 859
Sau3AI GATC 7 cut(s) 301, 325, 364, 634, 765, 943, 1017
Sau96I GGNCC 2 cut(s) 4, 1301
SchI GAGTC 2 cut(s) 998, 1144
ScrFI CCNGG 3 cut(s) 1105, 1146, 1299
SduI GDGCHC 3 cut(s) 242, 761, 1071
SfaNI GCATC 3 cut(s) 538, 721, 1266
SfuI TTCGAA 1 cut(s) 498
SgrAI CRCCGGYG 1 cut(s) 419
SinI GGWCC 1 cut(s) 1301
SmiMI CAYNNNNRTG 3 cut(s) 114, 483, 1205
SphI GCATGC 1 cut(s) 1092
SsiI CCGC 9 cut(s) 33, 269, 283, 375, 390, 597, 625, 638, 859
SspMI CTAG 3 cut(s) 26, 887, 953
StyD4I CCNGG 3 cut(s) 1103, 1144, 1297
StyI CCWWGG 3 cut(s) 166, 972, 1203
TaaI ACNGT 2 cut(s) 927, 1327
TaiI ACGT 2 cut(s) 810, 1163
TaqI TCGA 3 cut(s) 498, 718, 1263
TatI WGTACW 1 cut(s) 88
TauI GCSGC 2 cut(s) 272, 861
TfiI GAWTC 1 cut(s) 881
Tru1I TTAA 3 cut(s) 291, 1316, 1387
Tru9I TTAA 3 cut(s) 291, 1316, 1387
TscAI CASTG 3 cut(s) 91, 336, 798
TseFI GTSAC 2 cut(s) 225, 1321
TseI GCWGC 4 cut(s) 517, 520, 523, 680
Tsp45I GTSAC 2 cut(s) 225, 1321
TspDTI ATGAA 7 cut(s) 137, 441, 633, 795, 993, 1050, 1234
TspRI CASTG 3 cut(s) 91, 336, 798
VneI GTGCAC 2 cut(s) 238, 1067
VpaK11BI GGWCC 1 cut(s) 1301
XagI CCTNNNNNAGG 1 cut(s) 902
XapI RAATTY 2 cut(s) 737, 1037
XceI RCATGY 3 cut(s) 238, 1059, 1092
XcmI CCANNNNNNNNNTGG 1 cut(s) 825
XmnI GAANNNNTTC 2 cut(s) 1229, 1356
XspI CTAG 3 cut(s) 26, 887, 953
ZraI GACGTC 1 cut(s) 808
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.