Rmu_sc0006945.1_g000041

RNA binding

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0006945.1
OG0000213
Physical Location & Seq
Reverse (-)
166467 .. 167864
1398 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0006945.1_g000041.1.cds

Sequence Viewer

Length: 1398 bp
atgatgaatcccattccgaaccgcagtgggattagtccagtccagtccagctgtcaaatgaggagttggtgtgtatataaagggggccgagaactagttcccatttcgtatctcccatctctcagacgctcaaatccaaaggaaaggaaacagaggaagcaacaaaagcaaagaaacatgtcctcccaaaaacagcttgacctacccaccagcgacggcgaagaggagaggcagcaacacccgctccggaagaccaaagagaagttgaagtgggagttggagctggaggagggtgacaagtcattctacatgtgttgtctagagcacaggagcgactgggtggcttatgttgtccacaccatcaaactgtcggatttgttatcatattcggcggtgggggaccagccaccgcgattacggcaagtggcttataaggccgggtcgcatctccccggctctgtgggttgcggtgtttggggatcccaaattgttttcaccggcggcgtgacacccagctcccctttcggcttcaggacaataggtcctgactcagtttggcatacaaatgtttatgcctttgaaactcacacaaatgagatcacagagcttgacgccaatttacaaggagggaaaatggagcctttgatggtggagctggagggcaaactgtactctctttcctataagctggtcggccatcctccctcatttgaggtgtttgaccctaaaatgggcaagtgggaaggtttaccccaacctccattcttccaagttggctctccatattatgatcatggaaacttctcttatgcaatcgccggcacaaagatgtttgcctcccatgaaaaatgtccagtgttctgctttgacgtcgcccacccggatagagaatggagactagtccctactatgttccggggtggcccttttcccttcaataacaaggctttagtcctggacctgcaggaggacgacaagaagaaaataatgtttggctacagttatgagccttggcgtctaagggtatatcttatgtcattgtctgaaaacaaagaaattatcacaaaaatcggtcatctgaggatgccagcgttgcctgctgaattgggtttgccacaacgctgtgaatttttgcacataggaggtcagaaagcctgccttgttgtcaccgaattcgacttccgtggtggagtcgacgctcctgcttataatgagcgcaatactcataagagacacggtgcggtcataccatttcaatttgaagttgatatcaccaaggtggacaaggacaagaaaaattgtttaacactccaattcatgcctcttcgcagcttcgaataccataccaacccatccagttttcctgaacctgaaacggttggctgctttctgctgtga

Protein Analysis

465

Amino Acids

53.1

Weight (kDa)

8.35

Isoelectric Point (pI)

56.97

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000213)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03120 FvH4_1g03530 FvH4_1g03650 FvH4_1g03720 FvH4_1g03730 FvH4_1g03800 FvH4_1g03820 FvH4_1g03870 FvH4_1g04520 FvH4_1g04650 FvH4_1g04850 FvH4_1g04870 FvH4_1g04892 FvH4_1g04980 FvH4_1g04981 FvH4_1g04982 FvH4_1g04991 FvH4_1g05020 FvH4_1g07301 FvH4_1g07310 FvH4_1g07350 FvH4_1g07350 FvH4_1g07350 FvH4_4g06201 FvH4_4g06202 FvH4_5g09162 FvH4_5g09163 FvH4_5g09240 FvH4_5g33421 FvH4_6g38540 FvH4_7g04610
malus_domestica MD02G1004600.v1.1
prunus_persica Prupe.6G029800_v2.0.a1 Prupe.7G110000_v2.0.a1
pyrus_communis pycom08g14630
rosa_chinensis RchiOBHm_Chr1g0329851 RchiOBHm_Chr2g0088891 RchiOBHm_Chr2g0089871 RchiOBHm_Chr2g0090141 RchiOBHm_Chr2g0090221 RchiOBHm_Chr2g0090631 RchiOBHm_Chr2g0090681 RchiOBHm_Chr4g0406891 RchiOBHm_Chr7g0225411
rosa_laevigata RLG00000001820 RLG00000009686 RLG00000015981 RLG00000016002 RLG00000016071 RLG00000016075 RLG00000016114 RLG00000016124 RLG00000016128 RLG00000016216 RLG00000019065 RLG00000029766 RLG00000029767 RLG00000029858 RLG00000032448
rosa_multiflora Rmu_sc0000226.1_g000014 Rmu_sc0000236.1_g000026 Rmu_sc0000236.1_g000028 Rmu_sc0000236.1_g000029 Rmu_sc0000236.1_g000036 Rmu_sc0000259.1_g000016 Rmu_sc0000259.1_g000017 Rmu_sc0002735.1_g000001 Rmu_sc0002759.1_g000075 Rmu_sc0002986.1_g000070 Rmu_sc0003459.1_g000002 Rmu_sc0003781.1_g000013 Rmu_sc0003952.1_g000005 Rmu_sc0003952.1_g000007 Rmu_sc0004526.1_g000002 Rmu_sc0005230.1_g000003 Rmu_sc0005424.1_g000013 Rmu_sc0005689.1_g000013 Rmu_sc0005689.1_g000014 Rmu_sc0005689.1_g000019 Rmu_sc0006945.1_g000041 Rmu_sc0008896.1_g000004 Rmu_sc0008968.1_g000008 Rmu_sc0009263.1_g000002 Rmu_sc0009263.1_g000003 Rmu_sc0016852.1_g000010 Rmu_sc0016852.1_g000012 Rmu_sc0019583.1_g000001 Rmu_sc0020367.1_g000002 Rmu_sc0021487.1_g000001 Rmu_sc0040185.1_g000002
rosa_roxburghii Rroxscaffold_1G00058590 Rroxscaffold_2G00150920 Rroxscaffold_2G00150950 Rroxscaffold_2G00150990 Rroxscaffold_2G00152360 Rroxscaffold_3G00227400 Rroxscaffold_3G00233830 Rroxscaffold_4G00301200 Rroxscaffold_4G00320610 Rroxscaffold_4G00332610 Rroxscaffold_5G00339640 Rroxscaffold_5G00351660
rosa_rugosa Rorug01G0091000 Rorug01G0091100 Rorug01G0486600 Rorug01G0488200 Rorug01G0488200 Rorug02G0009400 Rorug02G0009500 Rorug02G0009800 Rorug02G0012100 Rorug02G0012200 Rorug02G0016900 Rorug03G0363800.1
rosa_samantha Rh1BG080900 Rh1BG086600 Rh1DG118000 Rh1DG251300 Rh1DG251400 Rh2AG051500 Rh2AG054700 Rh2AG054800 Rh2AG055200 Rh2AG055400 Rh2AG055700 Rh2AG061900 Rh2AG062000 Rh2CG056200 Rh2DG362400 Rh4AG053200 Rh4BG051100 Rh4DG050000 Rh5CG153500 Rh7DG375300
rosa_wichuraiana Rw1G008030 Rw1G009110 Rw1G009170 Rw1G015600 Rw2G003250 Rw2G004020 Rw2G004550 Rw2G004690 Rw2G004710 Rw2G023940 Rw3G028880 Rw4G004290 Rw5G012660 Rw5G035010 Rw7G031660

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 432, 1209
AatII GACGTC 1 cut(s) 873
Acc36I ACCTGC 1 cut(s) 969
AccBSI CCGCTC 1 cut(s) 244
AccI GTMKAC 1 cut(s) 1194
AccII CGCG 1 cut(s) 412
AccIII TCCGGA 1 cut(s) 246
AciI CCGC 7 cut(s) 22, 242, 392, 410, 468, 501, 1241
AclWI GGATC 2 cut(s) 474, 487
AcoI YGGCCR 1 cut(s) 694
AcsI RAATTY 2 cut(s) 1127, 1172
AcuI CTGAAG 1 cut(s) 514
AcyI GRCGYC 3 cut(s) 612, 870, 1015
AfaI GTAC 1 cut(s) 671
AfiI CCNNNNNNNGG 3 cut(s) 730, 731, 967
AflIII ACRYGT 2 cut(s) 177, 309
AgsI TTSAA 5 cut(s) 268, 581, 937, 1256, 1262
AhdI GACNNNNNGTC 1 cut(s) 540
AhlI ACTAGT 2 cut(s) 94, 898
AjnI CCWGG 1 cut(s) 954
AjuI GAANNNNNNNTTGG 2 cut(s) 260, 292
AleI CACNNNNGTG 1 cut(s) 1277
AluBI AGCT 8 cut(s) 51, 196, 283, 516, 607, 655, 688, 1332
AluI AGCT 8 cut(s) 51, 196, 283, 516, 607, 655, 688, 1332
Alw21I GWGCWC 1 cut(s) 327
Alw26I GTCTC 2 cut(s) 889, 1225
AlwI GGATC 2 cut(s) 474, 487
Aor13HI TCCGGA 1 cut(s) 246
AoxI GGCC 4 cut(s) 85, 435, 694, 922
ApeKI GCWGC 3 cut(s) 232, 1329, 1383
ApoI RAATTY 2 cut(s) 1127, 1172
Asp700I GAANNNNTTC 1 cut(s) 96
AspLEI GCGC 1 cut(s) 1218
AspS9I GGNCC 5 cut(s) 85, 400, 542, 923, 958
AsuC2I CCSGG 4 cut(s) 439, 453, 881, 917
AsuHPI GGTGA 4 cut(s) 305, 487, 1159, 1264
AsuII TTCGAA 1 cut(s) 1335
AvaII GGWCC 3 cut(s) 400, 542, 958
BamHI GGATCC 1 cut(s) 479
BbsI GAAGAC 1 cut(s) 257
Bbv12I GWGCWC 1 cut(s) 327
BbvI GCAGC 3 cut(s) 244, 1341, 1370
BccI CCATC 5 cut(s) 124, 368, 640, 705, 1360
BceAI ACGGC 2 cut(s) 232, 434
BcgI CGANNNNNNTGC 2 cut(s) 1184, 1218
BciT130I CCWGG 1 cut(s) 956
BclI TGATCA 1 cut(s) 790
BcnI CCSGG 4 cut(s) 439, 453, 881, 917
BcoDI GTCTC 2 cut(s) 889, 1225
BcuI ACTAGT 2 cut(s) 94, 898
BfaI CTAG 3 cut(s) 95, 320, 899
BfmI CTRYAG 2 cut(s) 962, 997
BfuAI ACCTGC 1 cut(s) 969
BisI GCNGC 4 cut(s) 233, 502, 1330, 1384
BlsI GCNGC 4 cut(s) 234, 503, 1331, 1385
Bme1390I CCNGG 5 cut(s) 439, 453, 881, 917, 956
Bme18I GGWCC 3 cut(s) 400, 542, 958
BmeRI GACNNNNNGTC 1 cut(s) 540
BmgT120I GGNCC 5 cut(s) 85, 400, 542, 923, 958
BmiI GGNNCC 4 cut(s) 86, 401, 481, 639
BmrFI CCNGG 5 cut(s) 439, 453, 881, 917, 956
BmrI ACTGGG 1 cut(s) 346
BmsI GCATC 2 cut(s) 454, 1074
BmuI ACTGGG 1 cut(s) 346
BpiI GAAGAC 1 cut(s) 257
BpmI CTGGAG 2 cut(s) 305, 677
Bpu14I TTCGAA 1 cut(s) 1335
BpuMI CCSGG 4 cut(s) 439, 453, 881, 917
BsaHI GRCGYC 3 cut(s) 612, 870, 1015
BsaJI CCNNGG 5 cut(s) 451, 916, 1010, 1183, 1275
BsaWI WCCGGW 1 cut(s) 246
BsaXI ACNNNNNCTCC 6 cut(s) 55, 85, 167, 197, 228, 258
Bsc4I CCNNNNNNNGG 3 cut(s) 730, 731, 967
Bse118I RCCGGY 2 cut(s) 497, 818
Bse1I ACTGG 5 cut(s) 38, 43, 341, 854, 1356
BseAI TCCGGA 1 cut(s) 246
BseBI CCWGG 1 cut(s) 956
BseDI CCNNGG 5 cut(s) 451, 916, 1010, 1183, 1275
BseGI GGATG 3 cut(s) 697, 1089, 1352
BseLI CCNNNNNNNGG 3 cut(s) 730, 731, 967
BseMII CTCAG 3 cut(s) 136, 564, 1070
BseNI ACTGG 5 cut(s) 38, 43, 341, 854, 1356
BseRI GAGGAG 3 cut(s) 76, 239, 302
BseXI GCAGC 3 cut(s) 244, 1341, 1370
BseYI CCCAGC 1 cut(s) 512
Bsh1236I CGCG 1 cut(s) 412
BshFI GGCC 4 cut(s) 87, 437, 696, 924
BsiHKAI GWGCWC 1 cut(s) 327
BsiSI CCGG 7 cut(s) 247, 438, 453, 498, 819, 881, 916
BslFI GGGAC 2 cut(s) 413, 887
BslI CCNNNNNNNGG 3 cut(s) 730, 731, 967
BsmAI GTCTC 2 cut(s) 889, 1225
BsmFI GGGAC 2 cut(s) 413, 887
BsnI GGCC 4 cut(s) 87, 437, 696, 924
Bsp119I TTCGAA 1 cut(s) 1335
Bsp1286I GDGCHC 1 cut(s) 327
Bsp13I TCCGGA 1 cut(s) 246
Bsp143I GATC 3 cut(s) 479, 597, 790
BspACI CCGC 7 cut(s) 22, 242, 392, 410, 468, 501, 1241
BspANI GGCC 4 cut(s) 87, 437, 696, 924
BspCNI CTCAG 3 cut(s) 135, 563, 1071
BspEI TCCGGA 1 cut(s) 246
BspFNI CGCG 1 cut(s) 412
BspLI GGNNCC 4 cut(s) 86, 401, 481, 639
BspMAI CTGCAG 1 cut(s) 966
BspMI ACCTGC 1 cut(s) 969
BspPI GGATC 2 cut(s) 474, 487
BspT104I TTCGAA 1 cut(s) 1335
BsrBI CCGCTC 1 cut(s) 244
BsrFI RCCGGY 2 cut(s) 497, 818
BsrI ACTGG 5 cut(s) 38, 43, 341, 854, 1356
BssAI RCCGGY 2 cut(s) 497, 818
BssECI CCNNGG 5 cut(s) 451, 916, 1010, 1183, 1275
BssMI GATC 3 cut(s) 479, 597, 790
BssNI GRCGYC 3 cut(s) 612, 870, 1015
BssT1I CCWWGG 2 cut(s) 1010, 1275
Bst2UI CCWGG 1 cut(s) 956
Bst4CI ACNGT 5 cut(s) 369, 669, 1001, 1238, 1378
Bst6I CTCTTC 2 cut(s) 216, 1329
BstACI GRCGYC 3 cut(s) 612, 870, 1015
BstBI TTCGAA 1 cut(s) 1335
BstC8I GCNNGC 4 cut(s) 820, 1089, 1098, 1156
BstDEI CTNAG 4 cut(s) 122, 550, 1019, 1079
BstDSI CCRYGG 1 cut(s) 1183
BstENI CCTNNNNNAGG 1 cut(s) 965
BstF5I GGATG 3 cut(s) 697, 1089, 1352
BstFNI CGCG 1 cut(s) 412
BstHHI GCGC 1 cut(s) 1218
BstKTI GATC 3 cut(s) 482, 600, 793
BstMAI GTCTC 2 cut(s) 889, 1225
BstMBI GATC 3 cut(s) 479, 597, 790
BstMWI GCNNNNNNNGC 6 cut(s) 166, 241, 418, 434, 1093, 1097
BstNI CCWGG 1 cut(s) 956
BstNSI RCATGY 2 cut(s) 181, 313
BstSCI CCNGG 5 cut(s) 437, 451, 879, 915, 954
BstSFI CTRYAG 2 cut(s) 962, 997
BstUI CGCG 1 cut(s) 412
BstV1I GCAGC 3 cut(s) 244, 1341, 1370
BstV2I GAAGAC 1 cut(s) 257
BstX2I RGATCY 1 cut(s) 479
BstYI RGATCY 1 cut(s) 479
BsuRI GGCC 4 cut(s) 87, 437, 696, 924
BtgI CCRYGG 1 cut(s) 1183
BtsCI GGATG 3 cut(s) 697, 1089, 1352
BtsI GCAGTG 1 cut(s) 31
BtsIMutI CAGTG 2 cut(s) 31, 861
BveI ACCTGC 1 cut(s) 969
Cac8I GCNNGC 4 cut(s) 820, 1089, 1098, 1156
CfoI GCGC 1 cut(s) 1218
Cfr10I RCCGGY 2 cut(s) 497, 818
Cfr13I GGNCC 5 cut(s) 85, 400, 542, 923, 958
CseI GACGC 4 cut(s) 135, 620, 1004, 1205
Csp6I GTAC 1 cut(s) 670
CviAII CATG 5 cut(s) 178, 310, 794, 842, 1318
CviQI GTAC 1 cut(s) 670
DdeI CTNAG 4 cut(s) 122, 550, 1019, 1079
DpnI GATC 3 cut(s) 481, 599, 792
DpnII GATC 3 cut(s) 479, 597, 790
DriI GACNNNNNGTC 1 cut(s) 540
EaeI YGGCCR 1 cut(s) 694
Eam1104I CTCTTC 2 cut(s) 216, 1329
Eam1105I GACNNNNNGTC 1 cut(s) 540
EarI CTCTTC 2 cut(s) 216, 1329
Eco130I CCWWGG 2 cut(s) 1010, 1275
Eco32I GATATC 1 cut(s) 1270
Eco47I GGWCC 3 cut(s) 400, 542, 958
Eco57I CTGAAG 1 cut(s) 514
EcoNI CCTNNNNNAGG 1 cut(s) 965
EcoO109I RGGNCCY 1 cut(s) 542
EcoRI GAATTC 1 cut(s) 1172
EcoRII CCWGG 1 cut(s) 954
EcoRV GATATC 1 cut(s) 1270
EcoT14I CCWWGG 2 cut(s) 1010, 1275
ErhI CCWWGG 2 cut(s) 1010, 1275
FaeI CATG 5 cut(s) 181, 313, 797, 845, 1321
FalI AAGNNNNNCTT 2 cut(s) 1143, 1175
FaqI GGGAC 2 cut(s) 413, 887
FatI CATG 5 cut(s) 177, 309, 793, 841, 1317
FauI CCCGC 1 cut(s) 249
FbaI TGATCA 1 cut(s) 790
FblI GTMKAC 1 cut(s) 1194
Fnu4HI GCNGC 4 cut(s) 233, 502, 1330, 1384
FokI GGATG 3 cut(s) 684, 1096, 1339
Fsp4HI GCNGC 4 cut(s) 233, 502, 1330, 1384
FspBI CTAG 3 cut(s) 95, 320, 899
GlaI GCGC 1 cut(s) 1217
GluI GCNGC 4 cut(s) 233, 502, 1330, 1384
GsaI CCCAGC 1 cut(s) 516
GsuI CTGGAG 2 cut(s) 305, 677
HaeIII GGCC 4 cut(s) 87, 437, 696, 924
HapII CCGG 7 cut(s) 247, 438, 453, 498, 819, 881, 916
HgaI GACGC 4 cut(s) 135, 620, 1004, 1205
HhaI GCGC 1 cut(s) 1218
Hin1I GRCGYC 3 cut(s) 612, 870, 1015
Hin1II CATG 5 cut(s) 181, 313, 797, 845, 1321
Hin6I GCGC 1 cut(s) 1216
HinP1I GCGC 1 cut(s) 1216
HincII GTYRAC 1 cut(s) 1195
HindII GTYRAC 1 cut(s) 1195
HinfI GANTC 3 cut(s) 7, 548, 1191
HpaII CCGG 7 cut(s) 247, 438, 453, 498, 819, 881, 916
HphI GGTGA 4 cut(s) 305, 487, 1159, 1264
Hpy166II GTNNAC 4 cut(s) 355, 749, 1195, 1282
Hpy188I TCNGA 6 cut(s) 18, 125, 373, 1045, 1080, 1149
Hpy188III TCNNGA 5 cut(s) 247, 320, 532, 545, 1364
Hpy8I GTNNAC 4 cut(s) 355, 749, 1195, 1282
Hpy99I CGWCG 3 cut(s) 218, 875, 1199
HpyAV CCTTC 2 cut(s) 737, 943
HpyCH4III ACNGT 5 cut(s) 369, 669, 1001, 1238, 1378
HpyCH4IV ACGT 1 cut(s) 870
HpyCH4V TGCA 3 cut(s) 812, 964, 1135
HpyF10VI GCNNNNNNNGC 6 cut(s) 166, 241, 418, 434, 1093, 1097
HpyF3I CTNAG 4 cut(s) 122, 550, 1019, 1079
HpySE526I ACGT 1 cut(s) 870
Hsp92I GRCGYC 3 cut(s) 612, 870, 1015
Hsp92II CATG 5 cut(s) 181, 313, 797, 845, 1321
HspAI GCGC 1 cut(s) 1216
Kpn2I TCCGGA 1 cut(s) 246
KroI GCCGGC 1 cut(s) 818
KroNI GCCGGC 1 cut(s) 820
Ksp22I TGATCA 1 cut(s) 790
Kzo9I GATC 3 cut(s) 479, 597, 790
LmnI GCTCC 7 cut(s) 249, 280, 330, 521, 637, 652, 1204
Lsp1109I GCAGC 3 cut(s) 244, 1341, 1370
LweI GCATC 2 cut(s) 454, 1074
MaeI CTAG 3 cut(s) 95, 320, 899
MaeII ACGT 1 cut(s) 870
MaeIII GTNAC 3 cut(s) 293, 505, 1165
MalI GATC 3 cut(s) 481, 599, 792
MbiI CCGCTC 1 cut(s) 244
MboI GATC 3 cut(s) 479, 597, 790
MboII GAAGA 5 cut(s) 233, 262, 757, 991, 1316
MflI RGATCY 1 cut(s) 479
MhlI GDGCHC 1 cut(s) 327
MluCI AATT 9 cut(s) 486, 616, 1056, 1103, 1127, 1172, 1256, 1297, 1313
MlyI GAGTC 2 cut(s) 542, 1200
MmeI TCCRAC 2 cut(s) 258, 351
MroI TCCGGA 1 cut(s) 246
MroNI GCCGGC 1 cut(s) 818
MroXI GAANNNNTTC 1 cut(s) 96
MseI TTAA 1 cut(s) 1304
MslI CAYNNNNRTG 4 cut(s) 564, 591, 827, 1277
MspA1I CMGCKG 1 cut(s) 51
MspI CCGG 7 cut(s) 247, 438, 453, 498, 819, 881, 916
MspR9I CCNGG 5 cut(s) 439, 453, 881, 917, 956
MvaI CCWGG 1 cut(s) 956
MvnI CGCG 1 cut(s) 412
MwoI GCNNNNNNNGC 6 cut(s) 166, 241, 418, 434, 1093, 1097
NaeI GCCGGC 1 cut(s) 820
NciI CCSGG 4 cut(s) 439, 453, 881, 917
NdeII GATC 3 cut(s) 479, 597, 790
NgoMIV GCCGGC 1 cut(s) 818
NlaIII CATG 5 cut(s) 181, 313, 797, 845, 1321
NlaIV GGNNCC 4 cut(s) 86, 401, 481, 639
NmeAIII GCCGAG 1 cut(s) 113
NmuCI GTSAC 3 cut(s) 293, 505, 1165
NspI RCATGY 2 cut(s) 181, 313
NspV TTCGAA 1 cut(s) 1335
OliI CACNNNNGTG 1 cut(s) 1277
PciI ACATGT 2 cut(s) 177, 309
PdiI GCCGGC 1 cut(s) 820
PdmI GAANNNNTTC 1 cut(s) 96
PfeI GAWTC 1 cut(s) 7
PfoI TCCNGGA 1 cut(s) 954
PkrI GCNGC 4 cut(s) 234, 503, 1331, 1385
PleI GAGTC 2 cut(s) 542, 1199
PpsI GAGTC 2 cut(s) 542, 1199
PpuMI RGGWCCY 1 cut(s) 542
PscI ACATGT 2 cut(s) 177, 309
PsiI TTATAA 2 cut(s) 432, 1209
Psp5II RGGWCCY 1 cut(s) 542
Psp6I CCWGG 1 cut(s) 954
PspFI CCCAGC 1 cut(s) 512
PspGI CCWGG 1 cut(s) 954
PspN4I GGNNCC 4 cut(s) 86, 401, 481, 639
PspPI GGNCC 5 cut(s) 85, 400, 542, 923, 958
PspPPI RGGWCCY 1 cut(s) 542
PstI CTGCAG 1 cut(s) 966
PsuI RGATCY 1 cut(s) 479
PvuII CAGCTG 1 cut(s) 51
RsaI GTAC 1 cut(s) 671
RsaNI GTAC 1 cut(s) 670
RseI CAYNNNNRTG 4 cut(s) 564, 591, 827, 1277
SalI GTCGAC 1 cut(s) 1193
SaqAI TTAA 1 cut(s) 1304
SatI GCNGC 4 cut(s) 233, 502, 1330, 1384
Sau3AI GATC 3 cut(s) 479, 597, 790
Sau96I GGNCC 5 cut(s) 85, 400, 542, 923, 958
SbfI CCTGCAGG 1 cut(s) 966
SchI GAGTC 2 cut(s) 542, 1200
ScrFI CCNGG 5 cut(s) 439, 453, 881, 917, 956
SdaI CCTGCAGG 1 cut(s) 966
SduI GDGCHC 1 cut(s) 327
SfaNI GCATC 2 cut(s) 454, 1074
SfcI CTRYAG 2 cut(s) 962, 997
SfuI TTCGAA 1 cut(s) 1335
SgrAI CRCCGGYG 1 cut(s) 497
SinI GGWCC 3 cut(s) 400, 542, 958
SmiMI CAYNNNNRTG 4 cut(s) 564, 591, 827, 1277
SpeI ACTAGT 2 cut(s) 94, 898
Sse8387I CCTGCAGG 1 cut(s) 966
Sse9I AATT 9 cut(s) 486, 616, 1056, 1103, 1127, 1172, 1256, 1297, 1313
SsiI CCGC 7 cut(s) 22, 242, 392, 410, 468, 501, 1241
SspMI CTAG 3 cut(s) 95, 320, 899
StyD4I CCNGG 5 cut(s) 437, 451, 879, 915, 954
StyI CCWWGG 2 cut(s) 1010, 1275
TaaI ACNGT 5 cut(s) 369, 669, 1001, 1238, 1378
TaiI ACGT 1 cut(s) 873
TaqI TCGA 3 cut(s) 1176, 1194, 1335
TaqII GACCGA 1 cut(s) 1061
TasI AATT 9 cut(s) 486, 616, 1056, 1103, 1127, 1172, 1256, 1297, 1313
TatI WGTACW 1 cut(s) 669
TauI GCSGC 1 cut(s) 504
TfiI GAWTC 1 cut(s) 7
Tru1I TTAA 1 cut(s) 1304
Tru9I TTAA 1 cut(s) 1304
TscAI CASTG 2 cut(s) 31, 861
TseFI GTSAC 3 cut(s) 293, 505, 1165
TseI GCWGC 3 cut(s) 232, 1329, 1383
Tsp45I GTSAC 3 cut(s) 293, 505, 1165
TspDTI ATGAA 3 cut(s) 20, 858, 1306
TspGWI ACGGA 1 cut(s) 1172
TspRI CASTG 2 cut(s) 31, 861
VpaK11BI GGWCC 3 cut(s) 400, 542, 958
XagI CCTNNNNNAGG 1 cut(s) 965
XapI RAATTY 2 cut(s) 1127, 1172
XbaI TCTAGA 1 cut(s) 319
XceI RCATGY 2 cut(s) 181, 313
XmiI GTMKAC 1 cut(s) 1194
XmnI GAANNNNTTC 1 cut(s) 96
XspI CTAG 3 cut(s) 95, 320, 899
ZraI GACGTC 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.