pycom02g04610

NADPH adrenodoxin oxidoreductase

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
Physical Location & Seq
Forward (+)
3009794 .. 3012533
2740 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g04610.5

Sequence Viewer

Length: 1023 bp
ATGGGCCGGGACTCCAATTCGGAGCCTGAAGATTCACCAGAAAAGGAAGAAGAACGCACCCAACTTCTTCAGCCACACTCGCACCCTCCACCACCTCGATCAAATTCATACGTCACCCAAAAAATGGCGCTGTTTCAAGCTCGGACGTGGCTTTCCAGGACCTTCTCGAGCGTCGCTTCTCAGCCTCTCCGCGTCTGCGTAGTCGGAAGCGGACCTGCTGGCTTCTACACTGCTGAAAAGATGCTGAAGGCGCATCAGGAAGCAGAGGTGGATATCATCGATCGGTTGCCAACGCCTTTCGGATTAGTCCGCTCCGGCGTCGCTCCTGATCATCCCGAAACCAAGATTGTGGTGAACCAGTTTACGCGGGTTGCGCAACATGAACGCTGCTCGTTCTTTGGAAATGTGACCCTTGGATCCTCTGTAACTCTCCCGGAGCTACGTGAGCTGTATGATGTGGTTGTGCTTGCCTACGGTGCTGAAAGTGATAGAGTTCTTGGTATTCCTGGGGAAGATTTGAGTGGTGTATATGCGGCCAGAGAATTTGTTTGGTGGTATAACGGGCACCCAAATTGTAGATACCTAAATCCCGACTTGAAGAGTTCTGATACAGCTGTAATTCTTGGTCAGGGCAATGTAGCTCTTGATGCTGCACGTATTCTTTTACGACCAACAACAGAATTGGCCACAACTGATATTGCAAGCCATGCATTGGAAGCTCTTGAGGATAGCTCTATAAGGAAAGTGTATTTGGTTGGAAGGCGGGGACCAGTCCAAGCAGCTTGCACTGCTAAAGAGCTGCGTGAAATTCTTGGTATCAAAGATCTACGTGTTCACATAAAGGAAACTGATCTACTCACAACTCCAGCAGATGAGGAAGAGATGAAGAATAATCGAATTCGGAAAAGGGTTTATGAGTTGCTCTCTAAGGCAGCCATGACTAGACCTTCACACCCCAGATCAGCAAGATCGATCCACGTGAACTGCACTTTGTTTTCTTTCGGAAGCCAGATAAGTTTCTAG

Protein Analysis

341

Amino Acids

37.81

Weight (kDa)

6.57

Isoelectric Point (pI)

48.14

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc16I TGCGCA 1 cut(s) 375
Acc36I ACCTGC 1 cut(s) 223
AccB1I GGYRCC 1 cut(s) 564
AccB7I CCANNNNNTGG 2 cut(s) 124, 712
AccBSI CCGCTC 1 cut(s) 312
AccII CGCG 2 cut(s) 192, 367
AciI CCGC 6 cut(s) 190, 210, 310, 367, 533, 763
AclWI GGATC 3 cut(s) 411, 424, 967
AcoI YGGCCR 2 cut(s) 534, 684
AcsI RAATTY 4 cut(s) 103, 542, 807, 897
AcuI CTGAAG 3 cut(s) 48, 53, 266
AcvI CACGTG 1 cut(s) 979
AcyI GRCGYC 1 cut(s) 318
AfiI CCNNNNNNNGG 2 cut(s) 124, 712
AflIII ACRYGT 1 cut(s) 829
AgsI TTSAA 2 cut(s) 137, 598
AjiI CACGTC 1 cut(s) 147
AjnI CCWGG 2 cut(s) 155, 505
AjuI GAANNNNNNNTTGG 2 cut(s) 734, 766
AluBI AGCT 9 cut(s) 140, 439, 448, 614, 641, 719, 732, 782, 799
AluI AGCT 9 cut(s) 140, 439, 448, 614, 641, 719, 732, 782, 799
AlwI GGATC 3 cut(s) 411, 424, 967
Ama87I CYCGRG 1 cut(s) 166
AoxI GGCC 3 cut(s) 4, 534, 684
ApeKI GCWGC 5 cut(s) 387, 650, 779, 799, 932
ApoI RAATTY 4 cut(s) 103, 542, 807, 897
AspLEI GCGC 3 cut(s) 130, 253, 376
AspS9I GGNCC 4 cut(s) 4, 159, 212, 767
AsuC2I CCSGG 2 cut(s) 8, 434
AsuHPI GGTGA 3 cut(s) 27, 106, 364
AvaI CYCGRG 1 cut(s) 166
AvaII GGWCC 3 cut(s) 159, 212, 767
BaeGI GKGCMC 1 cut(s) 567
BaeI ACNNNNGTAYC 2 cut(s) 600, 633
BalI TGGCCA 1 cut(s) 686
BamHI GGATCC 1 cut(s) 416
BanI GGYRCC 1 cut(s) 564
BbrPI CACGTG 1 cut(s) 979
BbvI GCAGC 5 cut(s) 374, 637, 786, 791, 944
BciT130I CCWGG 2 cut(s) 157, 507
BclI TGATCA 1 cut(s) 328
BcnI CCSGG 2 cut(s) 8, 434
BfaI CTAG 2 cut(s) 942, 1021
BfoI RGCGCY 1 cut(s) 131
BfuAI ACCTGC 1 cut(s) 223
BglII AGATCT 1 cut(s) 823
BisI GCNGC 6 cut(s) 388, 534, 651, 780, 800, 933
BlsI GCNGC 6 cut(s) 389, 535, 652, 781, 801, 934
Bme1390I CCNGG 4 cut(s) 8, 157, 434, 507
Bme18I GGWCC 3 cut(s) 159, 212, 767
BmeT110I CYCGRG 1 cut(s) 166
BmgBI CACGTC 1 cut(s) 147
BmgT120I GGNCC 4 cut(s) 4, 159, 212, 767
BmiI GGNNCC 4 cut(s) 24, 418, 566, 768
BmrFI CCNGG 4 cut(s) 8, 157, 434, 507
BmsI GCATC 3 cut(s) 231, 262, 637
BplI GAGNNNNNCTC 4 cut(s) 716, 748, 908, 940
BpmI CTGGAG 1 cut(s) 849
BpuEI CTTGAG 1 cut(s) 743
BpuMI CCSGG 2 cut(s) 8, 434
Bsa29I ATCGAT 2 cut(s) 279, 971
BsaAI YACGTR 4 cut(s) 443, 656, 830, 979
BsaHI GRCGYC 1 cut(s) 318
BsaJI CCNNGG 2 cut(s) 412, 506
Bsc4I CCNNNNNNNGG 2 cut(s) 124, 712
Bse1I ACTGG 2 cut(s) 358, 770
Bse3DI GCAATG 1 cut(s) 640
BseBI CCWGG 2 cut(s) 157, 507
BseCI ATCGAT 2 cut(s) 279, 971
BseDI CCNNGG 2 cut(s) 412, 506
BseGI GGATG 1 cut(s) 331
BseLI CCNNNNNNNGG 2 cut(s) 124, 712
BseMI GCAATG 1 cut(s) 640
BseMII CTCAG 1 cut(s) 194
BseNI ACTGG 2 cut(s) 358, 770
BseSI GKGCMC 1 cut(s) 567
BseXI GCAGC 5 cut(s) 374, 637, 786, 791, 944
BsgI GTGCAG 2 cut(s) 636, 970
Bsh1236I CGCG 2 cut(s) 192, 367
Bsh1285I CGRYCG 1 cut(s) 283
BshFI GGCC 3 cut(s) 6, 536, 686
BshNI GGYRCC 1 cut(s) 564
BshVI ATCGAT 2 cut(s) 279, 971
BsiEI CGRYCG 1 cut(s) 283
BsiHKCI CYCGRG 1 cut(s) 166
BsiSI CCGG 3 cut(s) 7, 315, 434
BslFI GGGAC 2 cut(s) 23, 780
BslI CCNNNNNNNGG 2 cut(s) 124, 712
BsmFI GGGAC 2 cut(s) 23, 780
BsnI GGCC 3 cut(s) 6, 536, 686
BsoBI CYCGRG 1 cut(s) 166
Bsp1286I GDGCHC 1 cut(s) 567
Bsp143I GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
BspACI CCGC 6 cut(s) 190, 210, 310, 367, 533, 763
BspANI GGCC 3 cut(s) 6, 536, 686
BspCNI CTCAG 1 cut(s) 193
BspDI ATCGAT 2 cut(s) 279, 971
BspFNI CGCG 2 cut(s) 192, 367
BspLI GGNNCC 4 cut(s) 24, 418, 566, 768
BspMI ACCTGC 1 cut(s) 223
BspPI GGATC 3 cut(s) 411, 424, 967
BspT107I GGYRCC 1 cut(s) 564
BsrBI CCGCTC 1 cut(s) 312
BsrDI GCAATG 1 cut(s) 640
BsrI ACTGG 2 cut(s) 358, 770
BssECI CCNNGG 2 cut(s) 412, 506
BssMI GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
BssNI GRCGYC 1 cut(s) 318
BssT1I CCWWGG 1 cut(s) 412
Bst2UI CCWGG 2 cut(s) 157, 507
Bst4CI ACNGT 1 cut(s) 476
Bst6I CTCTTC 2 cut(s) 593, 873
BstACI GRCGYC 1 cut(s) 318
BstAPI GCANNNNNTGC 1 cut(s) 707
BstBAI YACGTR 4 cut(s) 443, 656, 830, 979
BstC8I GCNNGC 4 cut(s) 220, 468, 703, 784
BstDEI CTNAG 2 cut(s) 180, 927
BstF5I GGATG 1 cut(s) 331
BstFNI CGCG 2 cut(s) 192, 367
BstH2I RGCGCY 1 cut(s) 131
BstHHI GCGC 3 cut(s) 130, 253, 376
BstKTI GATC 9 cut(s) 101, 283, 331, 419, 826, 853, 962, 971, 975
BstMBI GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
BstMCI CGRYCG 1 cut(s) 283
BstMWI GCNNNNNNNGC 9 cut(s) 79, 250, 373, 445, 476, 647, 707, 716, 788
BstNI CCWGG 2 cut(s) 157, 507
BstSCI CCNGG 4 cut(s) 6, 155, 432, 505
BstSLI GKGCMC 1 cut(s) 567
BstUI CGCG 2 cut(s) 192, 367
BstV1I GCAGC 5 cut(s) 374, 637, 786, 791, 944
BstX2I RGATCY 2 cut(s) 416, 823
BstXI CCANNNNNNTGG 1 cut(s) 349
BstYI RGATCY 2 cut(s) 416, 823
Bsu15I ATCGAT 2 cut(s) 279, 971
BsuRI GGCC 3 cut(s) 6, 536, 686
BsuTUI ATCGAT 2 cut(s) 279, 971
BtrI CACGTC 1 cut(s) 147
BtsCI GGATG 1 cut(s) 331
BtsI GCAGTG 2 cut(s) 228, 786
BtsIMutI CAGTG 2 cut(s) 228, 786
BveI ACCTGC 1 cut(s) 223
Cac8I GCNNGC 4 cut(s) 220, 468, 703, 784
CfoI GCGC 3 cut(s) 130, 253, 376
Cfr13I GGNCC 4 cut(s) 4, 159, 212, 767
ClaI ATCGAT 2 cut(s) 279, 971
CseI GACGC 3 cut(s) 160, 181, 307
CviAII CATG 3 cut(s) 380, 707, 937
DdeI CTNAG 2 cut(s) 180, 927
DpnI GATC 9 cut(s) 100, 282, 330, 418, 825, 852, 961, 970, 974
DpnII GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
EaeI YGGCCR 2 cut(s) 534, 684
Eam1104I CTCTTC 2 cut(s) 593, 873
EarI CTCTTC 2 cut(s) 593, 873
Eco130I CCWWGG 1 cut(s) 412
Eco32I GATATC 1 cut(s) 274
Eco47I GGWCC 3 cut(s) 159, 212, 767
Eco57I CTGAAG 3 cut(s) 48, 53, 266
Eco72I CACGTG 1 cut(s) 979
Eco88I CYCGRG 1 cut(s) 166
EcoO109I RGGNCCY 1 cut(s) 159
EcoRI GAATTC 1 cut(s) 897
EcoRII CCWGG 2 cut(s) 155, 505
EcoRV GATATC 1 cut(s) 274
EcoT14I CCWWGG 1 cut(s) 412
EcoT22I ATGCAT 1 cut(s) 712
ErhI CCWWGG 1 cut(s) 412
FaeI CATG 3 cut(s) 383, 710, 940
FaqI GGGAC 2 cut(s) 23, 780
FatI CATG 3 cut(s) 379, 706, 936
FauI CCCGC 2 cut(s) 360, 756
FbaI TGATCA 1 cut(s) 328
Fnu4HI GCNGC 6 cut(s) 388, 534, 651, 780, 800, 933
FokI GGATG 1 cut(s) 318
Fsp4HI GCNGC 6 cut(s) 388, 534, 651, 780, 800, 933
FspBI CTAG 2 cut(s) 942, 1021
FspI TGCGCA 1 cut(s) 375
GlaI GCGC 3 cut(s) 129, 252, 375
GluI GCNGC 6 cut(s) 388, 534, 651, 780, 800, 933
GsuI CTGGAG 1 cut(s) 849
HaeII RGCGCY 1 cut(s) 131
HaeIII GGCC 3 cut(s) 6, 536, 686
HapII CCGG 3 cut(s) 7, 315, 434
HgaI GACGC 3 cut(s) 160, 181, 307
HhaI GCGC 3 cut(s) 130, 253, 376
Hin1I GRCGYC 1 cut(s) 318
Hin1II CATG 3 cut(s) 383, 710, 940
Hin6I GCGC 3 cut(s) 128, 251, 374
HinP1I GCGC 3 cut(s) 128, 251, 374
HinfI GANTC 2 cut(s) 11, 32
HpaII CCGG 3 cut(s) 7, 315, 434
HphI GGTGA 3 cut(s) 27, 106, 364
Hpy166II GTNNAC 4 cut(s) 355, 363, 835, 982
Hpy188I TCNGA 7 cut(s) 22, 144, 206, 302, 607, 903, 1004
Hpy188III TCNNGA 7 cut(s) 166, 257, 326, 335, 590, 644, 722
Hpy8I GTNNAC 4 cut(s) 355, 363, 835, 982
Hpy99I CGWCG 2 cut(s) 176, 323
HpyAV CCTTC 4 cut(s) 172, 241, 753, 957
HpyCH4III ACNGT 1 cut(s) 476
HpyCH4IV ACGT 6 cut(s) 111, 146, 442, 655, 829, 978
HpyCH4V TGCA 5 cut(s) 653, 701, 710, 786, 987
HpyF10VI GCNNNNNNNGC 9 cut(s) 79, 250, 373, 445, 476, 647, 707, 716, 788
HpyF3I CTNAG 2 cut(s) 180, 927
HpySE526I ACGT 6 cut(s) 111, 146, 442, 655, 829, 978
Hsp92I GRCGYC 1 cut(s) 318
Hsp92II CATG 3 cut(s) 383, 710, 940
HspAI GCGC 3 cut(s) 128, 251, 374
Ksp22I TGATCA 1 cut(s) 328
Kzo9I GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
LmnI GCTCC 4 cut(s) 22, 317, 328, 436
Lsp1109I GCAGC 5 cut(s) 374, 637, 786, 791, 944
LweI GCATC 3 cut(s) 231, 262, 637
MaeI CTAG 2 cut(s) 942, 1021
MaeII ACGT 6 cut(s) 111, 146, 442, 655, 829, 978
MaeIII GTNAC 3 cut(s) 112, 406, 424
MalI GATC 9 cut(s) 100, 282, 330, 418, 825, 852, 961, 970, 974
MbiI CCGCTC 1 cut(s) 312
MboI GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
MboII GAAGA 8 cut(s) 41, 59, 59, 62, 524, 610, 890, 898
MflI RGATCY 2 cut(s) 416, 823
MhlI GDGCHC 1 cut(s) 567
MlsI TGGCCA 1 cut(s) 686
MluCI AATT 8 cut(s) 16, 103, 542, 571, 618, 680, 807, 897
MluNI TGGCCA 1 cut(s) 686
MlyI GAGTC 1 cut(s) 5
MmeI TCCRAC 2 cut(s) 184, 736
MnlI CCTC 7 cut(s) 96, 105, 195, 259, 430, 718, 868
Mox20I TGGCCA 1 cut(s) 686
Mph1103I ATGCAT 1 cut(s) 712
MscI TGGCCA 1 cut(s) 686
Msp20I TGGCCA 1 cut(s) 686
MspA1I CMGCKG 1 cut(s) 614
MspI CCGG 3 cut(s) 7, 315, 434
MspR9I CCNGG 4 cut(s) 8, 157, 434, 507
MvaI CCWGG 2 cut(s) 157, 507
MvnI CGCG 2 cut(s) 192, 367
MwoI GCNNNNNNNGC 9 cut(s) 79, 250, 373, 445, 476, 647, 707, 716, 788
NciI CCSGG 2 cut(s) 8, 434
NdeII GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
NlaIII CATG 3 cut(s) 383, 710, 940
NlaIV GGNNCC 4 cut(s) 24, 418, 566, 768
NmuCI GTSAC 2 cut(s) 112, 406
NsbI TGCGCA 1 cut(s) 375
NsiI ATGCAT 1 cut(s) 712
PaeR7I CTCGAG 1 cut(s) 166
PfeI GAWTC 1 cut(s) 32
PflMI CCANNNNNTGG 2 cut(s) 124, 712
PfoI TCCNGGA 2 cut(s) 155, 432
PkrI GCNGC 6 cut(s) 389, 535, 652, 781, 801, 934
Ple19I CGATCG 1 cut(s) 283
PleI GAGTC 1 cut(s) 5
PmaCI CACGTG 1 cut(s) 979
PmlI CACGTG 1 cut(s) 979
PpsI GAGTC 1 cut(s) 5
Ppu21I YACGTR 4 cut(s) 443, 656, 830, 979
PpuMI RGGWCCY 1 cut(s) 159
Psp5II RGGWCCY 1 cut(s) 159
Psp6I CCWGG 2 cut(s) 155, 505
PspCI CACGTG 1 cut(s) 979
PspGI CCWGG 2 cut(s) 155, 505
PspN4I GGNNCC 4 cut(s) 24, 418, 566, 768
PspPI GGNCC 4 cut(s) 4, 159, 212, 767
PspPPI RGGWCCY 1 cut(s) 159
PsuI RGATCY 2 cut(s) 416, 823
PvuI CGATCG 1 cut(s) 283
PvuII CAGCTG 1 cut(s) 614
SatI GCNGC 6 cut(s) 388, 534, 651, 780, 800, 933
Sau3AI GATC 9 cut(s) 98, 280, 328, 416, 823, 850, 959, 968, 972
Sau96I GGNCC 4 cut(s) 4, 159, 212, 767
SchI GAGTC 1 cut(s) 5
ScrFI CCNGG 4 cut(s) 8, 157, 434, 507
SduI GDGCHC 1 cut(s) 567
SfaNI GCATC 3 cut(s) 231, 262, 637
Sfr274I CTCGAG 1 cut(s) 166
SinI GGWCC 3 cut(s) 159, 212, 767
SlaI CTCGAG 1 cut(s) 166
SmlI CTYRAG 2 cut(s) 166, 722
SmoI CTYRAG 2 cut(s) 166, 722
Sse9I AATT 8 cut(s) 16, 103, 542, 571, 618, 680, 807, 897
SsiI CCGC 6 cut(s) 190, 210, 310, 367, 533, 763
SspMI CTAG 2 cut(s) 942, 1021
StyD4I CCNGG 4 cut(s) 6, 155, 432, 505
StyI CCWWGG 1 cut(s) 412
TaaI ACNGT 1 cut(s) 476
TaiI ACGT 6 cut(s) 114, 149, 445, 658, 832, 981
TaqI TCGA 5 cut(s) 97, 167, 279, 895, 971
TasI AATT 8 cut(s) 16, 103, 542, 571, 618, 680, 807, 897
TauI GCSGC 1 cut(s) 536
TfiI GAWTC 1 cut(s) 32
TscAI CASTG 2 cut(s) 235, 793
TseFI GTSAC 2 cut(s) 112, 406
TseI GCWGC 5 cut(s) 387, 650, 779, 799, 932
Tsp45I GTSAC 2 cut(s) 112, 406
TspDTI ATGAA 3 cut(s) 96, 396, 899
TspRI CASTG 2 cut(s) 235, 793
Van91I CCANNNNNTGG 2 cut(s) 124, 712
VpaK11BI GGWCC 3 cut(s) 159, 212, 767
XapI RAATTY 4 cut(s) 103, 542, 807, 897
XhoI CTCGAG 1 cut(s) 166
XspI CTAG 2 cut(s) 942, 1021
Zsp2I ATGCAT 1 cut(s) 712
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.