Basic Information

Type: gene

Biological Identity

Species

pyrus_communis

Chromosome

Chr2

Orthogroup ID

OG0005766

Physical Location & Seq

Genomic Coordinates Forward (+)

3288269 .. 3295274

Gene Structure 7006 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

pycom02g05010.11

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2412 bp

ATGAGGATCGATCACACGTGCCGCCCTGATTTGAACCCAAAACCAAAACCCCCCTCTCCTTCTCTCTCTCTCTCCTCCCAATCAGAGCAAGCAGCCATGGAAACGATACTTCGAGACTGTGTCCAGCACAGTCTCCGTGATTTCATGCACCGGAACGCCATTTTCGTATGCGAACGCCTCTGCGCCGAGTTCCCTTCCGAGACGAATTTACAGTTGTTAGCTGGCTGTTACTTGCAAAGCAACCAAGCTTATGCTGCATATCATATTTTAAAGGGAACACAAGTGGCTCAATCCCGCTACTTGTTTGCACTATCATGCTTTCAGATGGATCTTCTAAGTGAAGCAGAAGCAGCGTTATGCCCTGCTAATGAGCCTGGTGCAGAGGTTCCAAATGGCGCAGCTGGTCATTACCTCTTAGGGCTTATATACAGGTATACTGACAGAAGGAAAAGTGCCATCCATCACTTTAAGCAGGCTTTGACTATTGATCCTTGTATGTGGACTGCTTACGAAGAGCTGTGCGTATTAGGCGCTGCTGAAGAAGCAGCTGTAGTTTTCGGTGAAGCTGCCGTTCTTTCCATACAAAAACAGTATCTACATCATGGATTAGCTTCTCAAAGTTTACTTACCCTGAATGAGGACTGCAGTTTAGTTTCTGGCAGGAATTTTAGCTCCGAAGATGTTGGCCAGAGACAATTGAAACATGTTCAAGGAAATAATATAAGAGATTTGTCTGGAAATTCTCATGTTAGTTTGGGCGGAGTGTCTGGTCATCCTGTAAATGGCACTTCTGGTTCATCTTTCTTTAACACTCCTTCCCCAATGCCCATGCAGTTGTCAGGTGTTGCTCCACCAGCTCTCTGTAGAATTGGCCAGCCAAATGGCCCAAACCTGAGCACAGGTACTGATAGCTCTCTGAAGTCAAATGTGAACTCTACAATTCAAGCCCCCAGAAGAAAGTTTGTTGATGAAGGAAAACTCCGCAAGATTTCAAGCAGGTTGTCTTTTGATTCTGGCAACCGGCGGAGCAATAGACTTGCTGCTGAAGCAGGGGCCAACACTAATGTCAGTGCCTCAGTGACAGCCGGAAATGGAACTACCAATTCATCTAAATATCTTGGAAGTTCCAAGCTGAGCTCTGTTGCACGTTCCTTGGCAAATCGCAAGGGGCAGCCATGGCCCAATGAAAATGTTGATGAAGGAATGCGCAATGAGACATATGATGATTCCCGTTCAGCAACTGCGACAGTAGCTTCTGGTTTTACTCCTAGTGATACTAGATATCTTGAACAAGAAGGAGCAACCTTGTCAAGTACTGGTGGTATTATCAACGTTTCAAGAGTTGCCACTGGTGCTTCAGAAATATTGAGTCTTTTGAGAACCCTCGGGGAAGGCTATAGACTTTCCTGCATGTACAGATGCCAGGATGCACTCGATGTCTATCTCAAACTTCCATACAAGCATTACAATACAGGATGGGTGCTTTCCCAGGTTGGAAAAGCTTATTGTGAATTGATAGACTATTCAGAAGCTGATCGGGCCTTCAGTCTTGCCCGTCAGGCATCACCTTACAGTTTAGAAGGGATGGACATGTATTCTACAGTTCTTTATCATTTGAAGGAAGATATGAAGTTAAGTTACCTGGCTCAAGAACTGATATCAACGGACCGCTTAGCTCCTCAGCCTTGGGTTGCAATGGGAAATTGCTATAGCTTGCAGAAAGACCATGAAACTGCTCTGAAAAATTTCCAGCGAGCTGTTCAACTTAATCCAAGATTCACATATGCGCATACCCTTTGTGGTCATGAATGTGTTGCTCTAGAGGATTTTGAGAATGGAATAAAGAGTTATCAGACCGCACTTCGTGTTGATGCAAGGCATTATAACGCCTGGTATGGCCTTGGAATGGTTTATCATCGCCAAGAGAAGTTTGAGTTCTCGGAGCATCACTTCCGGACAGCTTTCCAAATCAATTCACGTTCTTCTGTTATTATGACTTATCTTGCCTCAGCATTGCACGCTTTAAAGAGAAGCGAAGAAGCTCTAGTGATGATGGAGAAGGCTATTAGGGCTGACAAGAAGAATCCACTTCCAATGTATCATAAGGCTAGTATACTAATGAGCTTAGAAAAGTTCGATGAAGCTTTAGCGGTCTTAGAGGAGGTTAAAGAATACTCTCCTCGTGAAAGTAGTGTCTACGCTTTGATGGGTAAGATCTATAAGCGGCGTAACATGCATGAGAAAGCAATGCTTCATTTCGGTTATGCATTGGATTTGAAACCATCCGCAACTGATGTCGCTACCATTAAGGCTGACATTGAGAAGTTACATGTACCTGATGAACTAGACGATGAGTCGATCCATCGTGTCGGAATTCAGTTAAAGAGAACATCGTGCAAGTTATCTGGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005737 GO:0005819 GO:0005856 GO:0007275 GO:0007346 GO:0008150 GO:0009504 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010071 GO:0010154 GO:0015630 GO:0022414 GO:0022622 GO:0030154 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051726 GO:0061458 GO:0065007 GO:0090421 GO:0099402 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_16 TPR_19 TPR_2 TPR_8

Protein Analysis

804

Amino Acids

88.96

Weight (kDa)

7.34

Isoelectric Point (pI)

42.49

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0005766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20000 AT2G20000
fragaria_vesca	FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910
malus_domestica	MD02G1061000.v1.1 MD15G1194500.v1.1
prunus_persica	Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1
pyrus_communis	pycom02g05010 pycom15g17410
rosa_chinensis	RchiOBHm_Chr2g0091551 RchiOBHm_Chr2g0091631
rosa_laevigata	RLG00000016236
rosa_multiflora	Rmu_sc0000897.1_g000018
rosa_roxburghii	Rroxscaffold_2G00149940
rosa_rugosa	Rorug02G0018700 Rorug02G0018700
rosa_samantha	Rh2AG063900 Rh2BG063300 Rh2CG065000 Rh2DG063400
rosa_wichuraiana	Rw2G005650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	1884
Acc16I	TGCGCA	2 cut(s)	1208, 1788
Acc36I	ACCTGC	1 cut(s)	987
AccI	GTMKAC	3 cut(s)	434, 2113, 2196
AccIII	TCCGGA	1 cut(s)	1953
AclI	AACGTT	1 cut(s)	1332
AclWI	GGATC	4 cut(s)	14, 336, 482, 2353
AcoI	YGGCCR	2 cut(s)	685, 871
AcsI	RAATTY	5 cut(s)	205, 664, 739, 1744, 2373
AcuI	CTGAAG	5 cut(s)	558, 938, 1065, 1341, 1528
AcvI	CACGTG	1 cut(s)	18
AdeI	CACNNNGTG	1 cut(s)	1865
AfaI	GTAC	4 cut(s)	904, 1315, 1415, 2334
AfiI	CCNNNNNNNGG	3 cut(s)	637, 782, 1906
AflIII	ACRYGT	4 cut(s)	15, 703, 1590, 2329
AhdI	GACNNNNNGTC	1 cut(s)	2353
AjnI	CCWGG	5 cut(s)	373, 1422, 1488, 1641, 1889
Alw21I	GWGCWC	2 cut(s)	899, 1139
Alw26I	GTCTC	5 cut(s)	108, 137, 194, 685, 1208
AlwI	GGATC	4 cut(s)	14, 336, 482, 2353
AlwNI	CAGNNNCTG	3 cut(s)	905, 1241, 1532
Ama87I	CYCGRG	1 cut(s)	1385
Aor13HI	TCCGGA	1 cut(s)	1953
AoxI	GGCC	7 cut(s)	685, 871, 883, 1053, 1178, 1539, 1897
ApeKI	GCWGC	9 cut(s)	92, 254, 350, 398, 533, 545, 566, 1040, 1171
ApoI	RAATTY	5 cut(s)	205, 664, 739, 1744, 2373
Asp700I	GAANNNNTTC	1 cut(s)	1745
AspLEI	GCGC	5 cut(s)	185, 398, 533, 1209, 1789
AspS9I	GGNCC	5 cut(s)	884, 1053, 1179, 1539, 1666
AsuHPI	GGTGA	2 cut(s)	572, 1557
AvaI	CYCGRG	1 cut(s)	1385
AvaII	GGWCC	1 cut(s)	1666
BalI	TGGCCA	2 cut(s)	687, 873
BanII	GRGCYC	1 cut(s)	1139
BarI	GAAGNNNNNNTAC	2 cut(s)	1622, 1654
BauI	CACGAG	1 cut(s)	2181
BbrPI	CACGTG	1 cut(s)	18
Bbv12I	GWGCWC	2 cut(s)	899, 1139
BbvCI	CCTCAGC	2 cut(s)	1680, 2008
BbvI	GCAGC	9 cut(s)	104, 241, 362, 410, 520, 553, 557, 1027, 1183
BccI	CCATC	9 cut(s)	319, 464, 468, 1470, 1579, 2047, 2200, 2290, 2370
BceAI	ACGGC	1 cut(s)	554
BciT130I	CCWGG	5 cut(s)	375, 1424, 1490, 1643, 1891
BcoDI	GTCTC	5 cut(s)	108, 137, 194, 685, 1208
BfaI	CTAG	6 cut(s)	1269, 1278, 1820, 2045, 2109, 2345
BfmI	CTRYAG	6 cut(s)	549, 643, 862, 1396, 1599, 1708
BfoI	RGCGCY	1 cut(s)	534
BfuAI	ACCTGC	1 cut(s)	987
BglI	GCCNNNNNGGC	1 cut(s)	1559
BglII	AGATCT	1 cut(s)	2214
BlpI	GCTNAGC	2 cut(s)	1133, 1672
BmcAI	AGTACT	1 cut(s)	1315
Bme1390I	CCNGG	5 cut(s)	375, 1424, 1490, 1643, 1891
Bme18I	GGWCC	1 cut(s)	1666
BmeRI	GACNNNNNGTC	1 cut(s)	2353
BmeT110I	CYCGRG	1 cut(s)	1385
BmgT120I	GGNCC	5 cut(s)	884, 1053, 1179, 1539, 1666
BmiI	GGNNCC	2 cut(s)	387, 1054
BmrFI	CCNGG	5 cut(s)	375, 1424, 1490, 1643, 1891
BmsI	GCATC	5 cut(s)	1409, 1417, 1571, 1861, 1954
Bpu10I	CCTNAGC	3 cut(s)	893, 1680, 2008
Bpu1102I	GCTNAGC	2 cut(s)	1133, 1672
BpuEI	CTTGAG	1 cut(s)	1632
Bsa29I	ATCGAT	1 cut(s)	9
BsaAI	YACGTR	1 cut(s)	18
BsaBI	GATNNNNATC	1 cut(s)	1440
BsaJI	CCNNGG	7 cut(s)	96, 1152, 1175, 1384, 1488, 1685, 1900
BsaWI	WCCGGW	2 cut(s)	150, 1953
Bsc4I	CCNNNNNNNGG	3 cut(s)	637, 782, 1906
Bse118I	RCCGGY	1 cut(s)	1020
Bse1I	ACTGG	2 cut(s)	1321, 1354
Bse3DI	GCAATG	4 cut(s)	1216, 1701, 2012, 2253
Bse8I	GATNNNNATC	1 cut(s)	1440
BseAI	TCCGGA	1 cut(s)	1953
BseBI	CCWGG	5 cut(s)	375, 1424, 1490, 1643, 1891
BseCI	ATCGAT	1 cut(s)	9
BseDI	CCNNGG	7 cut(s)	96, 1152, 1175, 1384, 1488, 1685, 1900
BseGI	GGATG	6 cut(s)	456, 772, 1432, 1481, 1590, 2282
BseJI	GATNNNNATC	1 cut(s)	1440
BseLI	CCNNNNNNNGG	3 cut(s)	637, 782, 1906
BseMI	GCAATG	4 cut(s)	1216, 1701, 2012, 2253
BseMII	CTCAG	5 cut(s)	884, 1089, 1124, 1694, 2022
BseNI	ACTGG	2 cut(s)	1321, 1354
BseRI	GAGGAG	4 cut(s)	64, 1668, 2169, 2174
BseXI	GCAGC	9 cut(s)	104, 241, 362, 410, 520, 553, 557, 1027, 1183
BsgI	GTGCAG	1 cut(s)	399
BshFI	GGCC	7 cut(s)	687, 873, 885, 1055, 1180, 1541, 1899
BshVI	ATCGAT	1 cut(s)	9
BsiHKAI	GWGCWC	2 cut(s)	899, 1139
BsiHKCI	CYCGRG	1 cut(s)	1385
BsiSI	CCGG	4 cut(s)	151, 1021, 1086, 1954
BslI	CCNNNNNNNGG	3 cut(s)	637, 782, 1906
BsmAI	GTCTC	5 cut(s)	108, 137, 194, 685, 1208
BsmBI	CGTCTC	1 cut(s)	194
BsmI	GAATGC	1 cut(s)	1209
BsnI	GGCC	7 cut(s)	687, 873, 885, 1055, 1180, 1541, 1899
BsoBI	CYCGRG	1 cut(s)	1385
Bsp1286I	GDGCHC	2 cut(s)	899, 1139
Bsp13I	TCCGGA	1 cut(s)	1953
Bsp1407I	TGTACA	1 cut(s)	1413
Bsp143I	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
Bsp1720I	GCTNAGC	2 cut(s)	1133, 1672
Bsp19I	CCATGG	2 cut(s)	96, 1175
BspANI	GGCC	7 cut(s)	687, 873, 885, 1055, 1180, 1541, 1899
BspCNI	CTCAG	5 cut(s)	885, 1088, 1125, 1693, 2021
BspDI	ATCGAT	1 cut(s)	9
BspEI	TCCGGA	1 cut(s)	1953
BspHI	TCATGA	1 cut(s)	1804
BspLI	GGNNCC	2 cut(s)	387, 1054
BspMAI	CTGCAG	1 cut(s)	647
BspMI	ACCTGC	1 cut(s)	987
BspPI	GGATC	4 cut(s)	14, 336, 482, 2353
BspQI	GCTCTTC	1 cut(s)	507
BsrDI	GCAATG	4 cut(s)	1216, 1701, 2012, 2253
BsrFI	RCCGGY	1 cut(s)	1020
BsrGI	TGTACA	1 cut(s)	1413
BsrI	ACTGG	2 cut(s)	1321, 1354
BssAI	RCCGGY	1 cut(s)	1020
BssECI	CCNNGG	7 cut(s)	96, 1152, 1175, 1384, 1488, 1685, 1900
BssMI	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
BssNAI	GTATAC	2 cut(s)	435, 2114
BssSI	CACGAG	1 cut(s)	2181
BssT1I	CCWWGG	5 cut(s)	96, 1152, 1175, 1685, 1900
Bst1107I	GTATAC	2 cut(s)	435, 2114
Bst2BI	CACGAG	1 cut(s)	2181
Bst2UI	CCWGG	5 cut(s)	375, 1424, 1490, 1643, 1891
Bst4CI	ACNGT	7 cut(s)	119, 131, 213, 591, 1249, 1574, 1603
Bst6I	CTCTTC	1 cut(s)	507
BstAUI	TGTACA	1 cut(s)	1413
BstBAI	YACGTR	1 cut(s)	18
BstC8I	GCNNGC	7 cut(s)	90, 223, 474, 875, 1715, 1755, 2019
BstDSI	CCRYGG	2 cut(s)	96, 1175
BstENI	CCTNNNNNAGG	1 cut(s)	635
BstF5I	GGATG	6 cut(s)	456, 772, 1432, 1481, 1590, 2282
BstH2I	RGCGCY	1 cut(s)	534
BstHHI	GCGC	5 cut(s)	185, 398, 533, 1209, 1789
BstKTI	GATC	7 cut(s)	9, 13, 331, 490, 1537, 2217, 2361
BstMAI	GTCTC	5 cut(s)	108, 137, 194, 685, 1208
BstMBI	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
BstNI	CCWGG	5 cut(s)	375, 1424, 1490, 1643, 1891
BstNSI	RCATGY	5 cut(s)	707, 1414, 1594, 2236, 2333
BstSCI	CCNGG	5 cut(s)	373, 1422, 1488, 1641, 1889
BstSFI	CTRYAG	6 cut(s)	549, 643, 862, 1396, 1599, 1708
BstV1I	GCAGC	9 cut(s)	104, 241, 362, 410, 520, 553, 557, 1027, 1183
BstX2I	RGATCY	2 cut(s)	328, 2214
BstXI	CCANNNNNNTGG	1 cut(s)	881
BstYI	RGATCY	2 cut(s)	328, 2214
BstZ17I	GTATAC	2 cut(s)	435, 2114
Bsu15I	ATCGAT	1 cut(s)	9
BsuRI	GGCC	7 cut(s)	687, 873, 885, 1055, 1180, 1541, 1899
BsuTUI	ATCGAT	1 cut(s)	9
BtgI	CCRYGG	2 cut(s)	96, 1175
BtgZI	GCGATG	1 cut(s)	1901
BtsCI	GGATG	6 cut(s)	456, 772, 1432, 1481, 1590, 2282
BtsIMutI	CAGTG	3 cut(s)	1075, 1083, 1347
BveI	ACCTGC	1 cut(s)	987
Cac8I	GCNNGC	7 cut(s)	90, 223, 474, 875, 1715, 1755, 2019
CaiI	CAGNNNCTG	3 cut(s)	905, 1241, 1532
CciI	TCATGA	1 cut(s)	1804
CfoI	GCGC	5 cut(s)	185, 398, 533, 1209, 1789
Cfr10I	RCCGGY	1 cut(s)	1020
Cfr13I	GGNCC	5 cut(s)	884, 1053, 1179, 1539, 1666
ClaI	ATCGAT	1 cut(s)	9
CpoI	CGGWCCG	1 cut(s)	1666
Csp6I	GTAC	4 cut(s)	903, 1314, 1414, 2333
CspI	CGGWCCG	1 cut(s)	1666
CviQI	GTAC	4 cut(s)	903, 1314, 1414, 2333
DpnI	GATC	7 cut(s)	8, 12, 330, 489, 1536, 2216, 2360
DpnII	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
DraI	TTTAAA	2 cut(s)	270, 2025
DraIII	CACNNNGTG	1 cut(s)	1865
DriI	GACNNNNNGTC	1 cut(s)	2353
EaeI	YGGCCR	2 cut(s)	685, 871
Eam1104I	CTCTTC	1 cut(s)	507
Eam1105I	GACNNNNNGTC	1 cut(s)	2353
EarI	CTCTTC	1 cut(s)	507
EciI	GGCGGA	2 cut(s)	774, 1039
Ecl136II	GAGCTC	1 cut(s)	1137
Eco130I	CCWWGG	5 cut(s)	96, 1152, 1175, 1685, 1900
Eco24I	GRGCYC	1 cut(s)	1139
Eco32I	GATATC	2 cut(s)	1283, 1659
Eco47I	GGWCC	1 cut(s)	1666
Eco53kI	GAGCTC	1 cut(s)	1137
Eco57I	CTGAAG	5 cut(s)	558, 938, 1065, 1341, 1528
Eco72I	CACGTG	1 cut(s)	18
Eco88I	CYCGRG	1 cut(s)	1385
EcoICRI	GAGCTC	1 cut(s)	1137
EcoNI	CCTNNNNNAGG	1 cut(s)	635
EcoRI	GAATTC	1 cut(s)	2373
EcoRII	CCWGG	5 cut(s)	373, 1422, 1488, 1641, 1889
EcoRV	GATATC	2 cut(s)	1283, 1659
EcoT14I	CCWWGG	5 cut(s)	96, 1152, 1175, 1685, 1900
EcoT22I	ATGCAT	2 cut(s)	2238, 2269
EcoT38I	GRGCYC	1 cut(s)	1139
ErhI	CCWWGG	5 cut(s)	96, 1152, 1175, 1685, 1900
Esp3I	CGTCTC	1 cut(s)	194
FalI	AAGNNNNNCTT	2 cut(s)	2235, 2267
FauI	CCCGC	1 cut(s)	302
FauNDI	CATATG	2 cut(s)	1219, 1783
FblI	GTMKAC	3 cut(s)	434, 2113, 2196
FokI	GGATG	6 cut(s)	443, 759, 1439, 1488, 1597, 2269
FriOI	GRGCYC	1 cut(s)	1139
FspAI	RTGCGCAY	1 cut(s)	1788
FspBI	CTAG	6 cut(s)	1269, 1278, 1820, 2045, 2109, 2345
FspI	TGCGCA	2 cut(s)	1208, 1788
GlaI	GCGC	5 cut(s)	184, 397, 532, 1208, 1788
HaeII	RGCGCY	1 cut(s)	534
HaeIII	GGCC	7 cut(s)	687, 873, 885, 1055, 1180, 1541, 1899
HapII	CCGG	4 cut(s)	151, 1021, 1086, 1954
HhaI	GCGC	5 cut(s)	185, 398, 533, 1209, 1789
Hin6I	GCGC	5 cut(s)	183, 396, 531, 1207, 1787
HinP1I	GCGC	5 cut(s)	183, 396, 531, 1207, 1787
HindIII	AAGCTT	3 cut(s)	246, 1500, 2142
HinfI	GANTC	6 cut(s)	1010, 1226, 1369, 1776, 2083, 2354
HpaII	CCGG	4 cut(s)	151, 1021, 1086, 1954
HphI	GGTGA	2 cut(s)	572, 1557
Hpy166II	GTNNAC	6 cut(s)	435, 501, 623, 931, 2114, 2197
Hpy188III	TCNNGA	9 cut(s)	113, 735, 1286, 1338, 1649, 1805, 1820, 1954, 2183
Hpy8I	GTNNAC	6 cut(s)	435, 501, 623, 931, 2114, 2197
HpyCH4III	ACNGT	7 cut(s)	119, 131, 213, 591, 1249, 1574, 1603
HpyCH4IV	ACGT	4 cut(s)	17, 1147, 1332, 1978
HpySE526I	ACGT	4 cut(s)	17, 1147, 1332, 1978
HspAI	GCGC	5 cut(s)	183, 396, 531, 1207, 1787
Kpn2I	TCCGGA	1 cut(s)	1953
Kzo9I	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
LguI	GCTCTTC	1 cut(s)	507
LmnI	GCTCC	6 cut(s)	677, 853, 1026, 1298, 1681, 1942
Lsp1109I	GCAGC	9 cut(s)	104, 241, 362, 410, 520, 553, 557, 1027, 1183
LweI	GCATC	5 cut(s)	1409, 1417, 1571, 1861, 1954
MaeI	CTAG	6 cut(s)	1269, 1278, 1820, 2045, 2109, 2345
MaeII	ACGT	4 cut(s)	17, 1147, 1332, 1978
MaeIII	GTNAC	5 cut(s)	227, 1078, 1637, 2228, 2325
MalI	GATC	7 cut(s)	8, 12, 330, 489, 1536, 2216, 2360
MboI	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
MboII	GAAGA	9 cut(s)	323, 524, 551, 689, 966, 1634, 1974, 2048, 2092
MfeI	CAATTG	1 cut(s)	695
MflI	RGATCY	2 cut(s)	328, 2214
MhlI	GDGCHC	2 cut(s)	899, 1139
MlsI	TGGCCA	2 cut(s)	687, 873
MluNI	TGGCCA	2 cut(s)	687, 873
MlyI	GAGTC	2 cut(s)	1378, 2363
MmeI	TCCRAC	2 cut(s)	1474, 2350
Mox20I	TGGCCA	2 cut(s)	687, 873
Mph1103I	ATGCAT	2 cut(s)	2238, 2269
MroI	TCCGGA	1 cut(s)	1953
MroXI	GAANNNNTTC	1 cut(s)	1745
MscI	TGGCCA	2 cut(s)	687, 873
MseI	TTAA	9 cut(s)	269, 468, 807, 1634, 1767, 2024, 2166, 2307, 2381
MslI	CAYNNNNRTG	2 cut(s)	313, 1809
Msp20I	TGGCCA	2 cut(s)	687, 873
MspA1I	CMGCKG	2 cut(s)	401, 548
MspI	CCGG	4 cut(s)	151, 1021, 1086, 1954
MspR9I	CCNGG	5 cut(s)	375, 1424, 1490, 1643, 1891
MunI	CAATTG	1 cut(s)	695
Mva1269I	GAATGC	1 cut(s)	1209
MvaI	CCWGG	5 cut(s)	375, 1424, 1490, 1643, 1891
NcoI	CCATGG	2 cut(s)	96, 1175
NdeI	CATATG	2 cut(s)	1219, 1783
NdeII	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
NlaIV	GGNNCC	2 cut(s)	387, 1054
NmeAIII	GCCGAG	1 cut(s)	211
NmuCI	GTSAC	1 cut(s)	1078
NsbI	TGCGCA	2 cut(s)	1208, 1788
NsiI	ATGCAT	2 cut(s)	2238, 2269
NspI	RCATGY	5 cut(s)	707, 1414, 1594, 2236, 2333
PagI	TCATGA	1 cut(s)	1804
PciI	ACATGT	3 cut(s)	703, 1590, 2329
PciSI	GCTCTTC	1 cut(s)	507
PcsI	WCGNNNNNNNCGW	1 cut(s)	162
PctI	GAATGC	1 cut(s)	1209
PdmI	GAANNNNTTC	1 cut(s)	1745
PfeI	GAWTC	4 cut(s)	1010, 1226, 1776, 2083
PflFI	GACNNNGTC	1 cut(s)	119
PleI	GAGTC	2 cut(s)	1377, 2362
PmaCI	CACGTG	1 cut(s)	18
PmlI	CACGTG	1 cut(s)	18
PpsI	GAGTC	2 cut(s)	1377, 2362
Ppu21I	YACGTR	1 cut(s)	18
PscI	ACATGT	3 cut(s)	703, 1590, 2329
PsiI	TTATAA	1 cut(s)	1884
Psp124BI	GAGCTC	1 cut(s)	1139
Psp1406I	AACGTT	1 cut(s)	1332
Psp6I	CCWGG	5 cut(s)	373, 1422, 1488, 1641, 1889
PspCI	CACGTG	1 cut(s)	18
PspGI	CCWGG	5 cut(s)	373, 1422, 1488, 1641, 1889
PspN4I	GGNNCC	2 cut(s)	387, 1054
PspPI	GGNCC	5 cut(s)	884, 1053, 1179, 1539, 1666
PstI	CTGCAG	1 cut(s)	647
PstNI	CAGNNNCTG	3 cut(s)	905, 1241, 1532
PsuI	RGATCY	2 cut(s)	328, 2214
PsyI	GACNNNGTC	1 cut(s)	119
PvuII	CAGCTG	2 cut(s)	401, 548
RsaI	GTAC	4 cut(s)	904, 1315, 1415, 2334
RsaNI	GTAC	4 cut(s)	903, 1314, 1414, 2333
RseI	CAYNNNNRTG	2 cut(s)	313, 1809
Rsr2I	CGGWCCG	1 cut(s)	1666
RsrII	CGGWCCG	1 cut(s)	1666
SacI	GAGCTC	1 cut(s)	1139
SapI	GCTCTTC	1 cut(s)	507
SaqAI	TTAA	9 cut(s)	269, 468, 807, 1634, 1767, 2024, 2166, 2307, 2381
Sau3AI	GATC	7 cut(s)	6, 10, 328, 487, 1534, 2214, 2358
Sau96I	GGNCC	5 cut(s)	884, 1053, 1179, 1539, 1666
ScaI	AGTACT	1 cut(s)	1315
SchI	GAGTC	2 cut(s)	1378, 2363
ScrFI	CCNGG	5 cut(s)	375, 1424, 1490, 1643, 1891
SduI	GDGCHC	2 cut(s)	899, 1139
SfaNI	GCATC	5 cut(s)	1409, 1417, 1571, 1861, 1954
SfcI	CTRYAG	6 cut(s)	549, 643, 862, 1396, 1599, 1708
SinI	GGWCC	1 cut(s)	1666
SmiMI	CAYNNNNRTG	2 cut(s)	313, 1809
SmlI	CTYRAG	1 cut(s)	1647
SmoI	CTYRAG	1 cut(s)	1647
SspI	AATATT	1 cut(s)	1365
SspMI	CTAG	6 cut(s)	1269, 1278, 1820, 2045, 2109, 2345
SstI	GAGCTC	1 cut(s)	1139
StyD4I	CCNGG	5 cut(s)	373, 1422, 1488, 1641, 1889
StyI	CCWWGG	5 cut(s)	96, 1152, 1175, 1685, 1900
TaaI	ACNGT	7 cut(s)	119, 131, 213, 591, 1249, 1574, 1603
TaiI	ACGT	4 cut(s)	20, 1150, 1335, 1981
TaqI	TCGA	5 cut(s)	9, 112, 1434, 2136, 2357
TatI	WGTACW	2 cut(s)	1313, 1413
TauI	GCSGC	2 cut(s)	24, 2227
TfiI	GAWTC	4 cut(s)	1010, 1226, 1776, 2083
Tru1I	TTAA	9 cut(s)	269, 468, 807, 1634, 1767, 2024, 2166, 2307, 2381
Tru9I	TTAA	9 cut(s)	269, 468, 807, 1634, 1767, 2024, 2166, 2307, 2381
TscAI	CASTG	3 cut(s)	1075, 1083, 1354
TseFI	GTSAC	1 cut(s)	1078
TseI	GCWGC	9 cut(s)	92, 254, 350, 398, 533, 545, 566, 1040, 1171
Tsp45I	GTSAC	1 cut(s)	1078
TspGWI	ACGGA	2 cut(s)	125, 1679
TspRI	CASTG	3 cut(s)	1075, 1083, 1354
Tth111I	GACNNNGTC	1 cut(s)	119
VpaK11BI	GGWCC	1 cut(s)	1666
XagI	CCTNNNNNAGG	1 cut(s)	635
XapI	RAATTY	5 cut(s)	205, 664, 739, 1744, 2373
XbaI	TCTAGA	1 cut(s)	1819
XceI	RCATGY	5 cut(s)	707, 1414, 1594, 2236, 2333
XmiI	GTMKAC	3 cut(s)	434, 2113, 2196
XmnI	GAANNNNTTC	1 cut(s)	1745
XspI	CTAG	6 cut(s)	1269, 1278, 1820, 2045, 2109, 2345
ZrmI	AGTACT	1 cut(s)	1315
Zsp2I	ATGCAT	2 cut(s)	2238, 2269

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.