Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0005766

Physical Location & Seq

Genomic Coordinates Forward (+)

5366348 .. 5374081

Gene Structure 7734 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G005650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2232 bp

ATGGAAGCCATACTCCGAGACTCCGTTCACCACAGCCTTCGCGATTTCCTCCACCGCAACGCCATTTTCCTCTGCGAGCGTCTCTGCGCCGAGTTCCCCTCCGAGACAAATTTGCAATTGTTAGCTGGATGTTACTTGCATAGTAATCAAGCTTATGCCGCATACCACATTTTAAAGGGAACACAAGTGGCTCAATCACGCTACTTGTTTGCTATGTCATGCTATCAGATGAATCTTCTGAATGAGGCAGAAGCAGCATTATGCCCCCCTAATGAGCCTAGTGCAGAGGTTCCAAATGGCGCAGCAGGTCATTACCTTCTTGGGCTTATTTATAGGTATACTGATAGAAGGAAAAGTGCCATCCATCACTTTAAACAGGCTTTGACTATAGACCCTTCAATGTGGGCTGCGTATGAAGAGCTGTGCGTGCTAGGTTCTGCTGAAGAAGCAGCTGTGGTTTTTGGGGAAGCTGCTGCTCTCTCCATACAAAAACAGTACCTACATCATGGATTAGCTTCTCAAAGTTTACTCACCGTCAATGATGATTGCAATTTAGTTTCTGGAAGGAACTTTAGCTTTGAAGATGTTAGTCCAAGACAATTGAAACTAATGCAAGGCAGTAATACAAGAGATAGTTCTGGAAATTCTCATGTTATTTTAGGAGGAGTTTCTGGTCAGCCTACAAACGGCAGTTCTAACATATCTTTCTATAACACTCCTTCACCAATGCCTATGCAGTTGTCAGGTATCGCTCCACCGCCGGTTTGTAGAAATGCCCTGCCAAATGGCCTAAACCTCAGCTCTGGTACTGATAGCTCTCCTAGGTCAACTATGAGCTCTACCGTTCAAGGTGGGAGAAGAAAGTTTGTTGATGAAGGAAAACTTCGAAAGATTTCTAGTAGATTATCTTTTGATTCTGGCAACCGAAGGAGCAATAGACTTGCTGCTGAAGCAGGGGCTAACACCAATGCAAGTGCGTCCATGGCAGCTGGAAATGGAACTACCAATACATCTAAAATTGGAAGTTCTAAGTTGGGCTCTGTAGCACGCTCCTTGACAAGTCGGAAGGGTCAGCCATGGGCCAATGAAAACCTTGATGAAGGCATACGGAATGAGACATTCGATGATTCCCGTTCAAATACAGCAGCTATCTCTGGTTTTACTCCCACTAGTGATACCAGATATCTTGAACAAGATGGAGCAACATTGTCAATTGGTGGGGGTATTATGCATGCTTCAAAAGTTATTAGCGGTGCGTCAGAAATTTTGAGCCTTTTGAGAACTCTTGGGGAAGGTTATAGGCTTTCATGCATGTACAGGTGCCAGGATGCACTGGATGTCTATCTGAAACTTCCATACAAGCATTACAATACAGGCTGGGTACTCTGCCAGGTTGGAAAAGCTTATTTTGAATTGCTAGATTATTTTGAAGCATCACCTTACAGTTTAGAAGGAATGGATGTATATTCTACAGTTCTTTATCTTTTGAACGAAGATATGAAGTTAAGTTACCTGGCACAAGAGCTCATATCAACTGATCGCTTAGCTCCTCAGTCTTGGTGTGCAATGGGAAATTGCTATAGCTTGCAGAAAGATCATGAAACTGCTCTGAAGAATTTCCAGCGAGCTGTTCAACTTAATTCAAAATTCACATATGCGCATACCCTTTGTGGTCATGAATATGTAGCCCTGGATGATTTTGAGAATGGAATAAAGAGCTATCAGAGTGCACTTCGGCTTGATGCAAGGCATTATAACTCCTGGTTTGGGCTTGGAATGATTTATTTTCGGCAAGAGAAGTTTGAGTTTGCAGAGCATCACTTCCGGACAGCTAACCAAATAAATCCATGTTCTTCTGTTATTGCGTCTAATCTTGGCACAGCATTGCATGCTTTACAGAGAAGTGATGAAGCTTTGGCGATTATGGAGAAGGCTATTAGAGCAGATGAGAAGAATCCTGTTCCCATGTATCAAAAGGCTAATATATTAATGAGCTTAGAAAAGTTTGATGAAGCTTTAGCAGTCTTGGAGCAGCTTAATGAATATTCTCCTCGTGAAAGTAGTGTGCATGCTTTGATGGGTAGGATTTATAAGCGGCGAAACATGCATGACAAAGCAATGCTTCATTTTGGCATTGCATTGGATTTGAAACCATCTACAACTGATGTCACTGCCATTAAGGCTGCCATTGAGAGGTTACTTGTACCGGATGATATAGAAGACAACCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005737 GO:0005819 GO:0005856 GO:0007275 GO:0007346 GO:0008150 GO:0009504 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010071 GO:0010154 GO:0015630 GO:0022414 GO:0022622 GO:0030154 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051726 GO:0061458 GO:0065007 GO:0090421 GO:0099402 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_16 TPR_19 TPR_2 TPR_8

Protein Analysis

743

Amino Acids

82.12

Weight (kDa)

6.3

Isoelectric Point (pI)

42.83

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC3	PF12895	17 - 88	9.8e-17	Anaphase-promoting complex, cyclosome, subunit 3
TPR_1	PF00515	518 - 550	1.2e-07	Tetratricopeptide repeat
TPR_19	PF14559	631 - 696	1.1e-09	Tetratricopeptide repeat
TPR-S	PF20308	636 - 703	4.5e-06	Tetratricopeptide Repeats-Sensor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20000 AT2G20000
fragaria_vesca	FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910
malus_domestica	MD02G1061000.v1.1 MD15G1194500.v1.1
prunus_persica	Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1
pyrus_communis	pycom02g05010 pycom15g17410
rosa_chinensis	RchiOBHm_Chr2g0091551 RchiOBHm_Chr2g0091631
rosa_laevigata	RLG00000016236
rosa_multiflora	Rmu_sc0000897.1_g000018
rosa_roxburghii	Rroxscaffold_2G00149940
rosa_rugosa	Rorug02G0018700 Rorug02G0018700
rosa_samantha	Rh2AG063900 Rh2BG063300 Rh2CG065000 Rh2DG063400
rosa_wichuraiana	Rw2G005650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1755, 2091
Acc16I	TGCGCA	1 cut(s)	1659
Acc36I	ACCTGC	1 cut(s)	296
AccB1I	GGYRCC	1 cut(s)	1320
AccI	GTMKAC	1 cut(s)	338
AccII	CGCG	1 cut(s)	42
AccIII	TCCGGA	1 cut(s)	1824
AciI	CCGC	5 cut(s)	55, 159, 758, 1251, 2095
AcsI	RAATTY	5 cut(s)	109, 643, 1263, 1615, 1646
AcuI	CTGAAG	3 cut(s)	462, 969, 1631
AfaI	GTAC	5 cut(s)	497, 808, 1316, 1383, 2205
AfiI	CCNNNNNNNGG	3 cut(s)	686, 1767, 2193
AhlI	ACTAGT	1 cut(s)	1169
AjnI	CCWGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
Alw21I	GWGCWC	3 cut(s)	839, 1527, 1732
Alw26I	GTCTC	4 cut(s)	12, 86, 98, 1109
Alw44I	GTGCAC	1 cut(s)	1728
Aor13HI	TCCGGA	1 cut(s)	1824
AoxI	GGCC	2 cut(s)	787, 1080
ApaLI	GTGCAC	1 cut(s)	1728
ApoI	RAATTY	5 cut(s)	109, 643, 1263, 1615, 1646
AseI	ATTAAT	1 cut(s)	1988
Asp700I	GAANNNNTTC	2 cut(s)	892, 1616
AspA2I	CCTAGG	1 cut(s)	821
AspLEI	GCGC	3 cut(s)	89, 302, 1660
AspS9I	GGNCC	1 cut(s)	1080
AsuHPI	GGTGA	4 cut(s)	20, 523, 714, 1428
AsuII	TTCGAA	1 cut(s)	886
AvrII	CCTAGG	1 cut(s)	821
BaeGI	GKGCMC	1 cut(s)	1732
BanI	GGYRCC	1 cut(s)	1320
BanII	GRGCYC	3 cut(s)	839, 1040, 1527
BarI	GAAGNNNNNNTAC	2 cut(s)	1493, 1525
BauI	CACGAG	1 cut(s)	2052
BbsI	GAAGAC	1 cut(s)	2226
Bbv12I	GWGCWC	3 cut(s)	839, 1527, 1732
BbvCI	CCTCAGC	1 cut(s)	797
BccI	CCATC	5 cut(s)	368, 372, 1190, 2071, 2161
BceAI	ACGGC	1 cut(s)	703
BciT130I	CCWGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
BcoDI	GTCTC	4 cut(s)	12, 86, 98, 1109
BcuI	ACTAGT	1 cut(s)	1169
BfaI	CTAG	6 cut(s)	279, 431, 822, 897, 1170, 1418
BfmI	CTRYAG	5 cut(s)	387, 1041, 1470, 1579, 2228
BfuAI	ACCTGC	1 cut(s)	296
BglI	GCCNNNNNGGC	1 cut(s)	2180
BlnI	CCTAGG	1 cut(s)	821
BlpI	GCTNAGC	1 cut(s)	1543
Bme1390I	CCNGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
BmgT120I	GGNCC	1 cut(s)	1080
BmiI	GGNNCC	2 cut(s)	291, 1322
BmrFI	CCNGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
BmsI	GCATC	4 cut(s)	1318, 1442, 1732, 1825
BpiI	GAAGAC	1 cut(s)	2226
BplI	GAGNNNNNCTC	2 cut(s)	83, 115
Bpu10I	CCTNAGC	1 cut(s)	797
Bpu1102I	GCTNAGC	1 cut(s)	1543
Bpu14I	TTCGAA	1 cut(s)	886
BsaBI	GATNNNNATC	1 cut(s)	1341
BsaJI	CCNNGG	4 cut(s)	821, 981, 1076, 1689
BsaWI	WCCGGW	2 cut(s)	1824, 2206
Bsc4I	CCNNNNNNNGG	3 cut(s)	686, 1767, 2193
Bse118I	RCCGGY	1 cut(s)	760
Bse1I	ACTGG	1 cut(s)	1338
Bse3DI	GCAATG	4 cut(s)	1572, 1883, 2124, 2133
Bse8I	GATNNNNATC	1 cut(s)	1341
BseAI	TCCGGA	1 cut(s)	1824
BseBI	CCWGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
BseDI	CCNNGG	4 cut(s)	821, 981, 1076, 1689
BseGI	GGATG	7 cut(s)	134, 360, 1333, 1342, 1465, 1699, 2215
BseJI	GATNNNNATC	1 cut(s)	1341
BseLI	CCNNNNNNNGG	3 cut(s)	686, 1767, 2193
BseMI	GCAATG	4 cut(s)	1572, 1883, 2124, 2133
BseMII	CTCAG	2 cut(s)	811, 1565
BseNI	ACTGG	1 cut(s)	1338
BseRI	GAGGAG	3 cut(s)	678, 1539, 2040
BseSI	GKGCMC	1 cut(s)	1732
BseYI	CCCAGC	1 cut(s)	1377
BsgI	GTGCAG	1 cut(s)	303
Bsh1236I	CGCG	1 cut(s)	42
BshFI	GGCC	2 cut(s)	789, 1082
BshNI	GGYRCC	1 cut(s)	1320
BsiHKAI	GWGCWC	3 cut(s)	839, 1527, 1732
BsiSI	CCGG	3 cut(s)	761, 1825, 2207
BslI	CCNNNNNNNGG	3 cut(s)	686, 1767, 2193
BsmAI	GTCTC	4 cut(s)	12, 86, 98, 1109
BsmBI	CGTCTC	1 cut(s)	86
BsnI	GGCC	2 cut(s)	789, 1082
Bsp119I	TTCGAA	1 cut(s)	886
Bsp1286I	GDGCHC	4 cut(s)	839, 1040, 1527, 1732
Bsp13I	TCCGGA	1 cut(s)	1824
Bsp1407I	TGTACA	1 cut(s)	1314
Bsp143I	GATC	2 cut(s)	1537, 1594
Bsp1720I	GCTNAGC	1 cut(s)	1543
Bsp19I	CCATGG	2 cut(s)	981, 1076
Bsp68I	TCGCGA	1 cut(s)	42
BspACI	CCGC	5 cut(s)	55, 159, 758, 1251, 2095
BspANI	GGCC	2 cut(s)	789, 1082
BspCNI	CTCAG	2 cut(s)	810, 1564
BspEI	TCCGGA	1 cut(s)	1824
BspFNI	CGCG	1 cut(s)	42
BspHI	TCATGA	2 cut(s)	1597, 1675
BspLI	GGNNCC	2 cut(s)	291, 1322
BspMI	ACCTGC	1 cut(s)	296
BspQI	GCTCTTC	1 cut(s)	411
BspT104I	TTCGAA	1 cut(s)	886
BspT107I	GGYRCC	1 cut(s)	1320
BsrDI	GCAATG	4 cut(s)	1572, 1883, 2124, 2133
BsrFI	RCCGGY	1 cut(s)	760
BsrGI	TGTACA	1 cut(s)	1314
BsrI	ACTGG	1 cut(s)	1338
BssAI	RCCGGY	1 cut(s)	760
BssECI	CCNNGG	4 cut(s)	821, 981, 1076, 1689
BssMI	GATC	2 cut(s)	1537, 1594
BssNAI	GTATAC	1 cut(s)	339
BssSI	CACGAG	1 cut(s)	2052
BssT1I	CCWWGG	3 cut(s)	821, 981, 1076
Bst1107I	GTATAC	1 cut(s)	339
Bst2BI	CACGAG	1 cut(s)	2052
Bst2UI	CCWGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
Bst4CI	ACNGT	5 cut(s)	495, 535, 844, 1445, 1474
Bst6I	CTCTTC	1 cut(s)	411
BstAPI	GCANNNNNTGC	1 cut(s)	1889
BstAUI	TGTACA	1 cut(s)	1314
BstBI	TTCGAA	1 cut(s)	886
BstC8I	GCNNGC	8 cut(s)	77, 428, 1048, 1233, 1586, 1626, 1890, 2070
BstDEI	CTNAG	5 cut(s)	797, 1029, 1543, 1551, 1996
BstDSI	CCRYGG	2 cut(s)	981, 1076
BstF5I	GGATG	7 cut(s)	134, 360, 1333, 1342, 1465, 1699, 2215
BstFNI	CGCG	1 cut(s)	42
BstHHI	GCGC	3 cut(s)	89, 302, 1660
BstKTI	GATC	2 cut(s)	1540, 1597
BstMAI	GTCTC	4 cut(s)	12, 86, 98, 1109
BstMBI	GATC	2 cut(s)	1537, 1594
BstNI	CCWGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
BstNSI	RCATGY	5 cut(s)	1235, 1315, 1892, 2072, 2107
BstSCI	CCNGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
BstSFI	CTRYAG	5 cut(s)	387, 1041, 1470, 1579, 2228
BstSLI	GKGCMC	1 cut(s)	1732
BstUI	CGCG	1 cut(s)	42
BstV2I	GAAGAC	1 cut(s)	2226
BstZ17I	GTATAC	1 cut(s)	339
BsuRI	GGCC	2 cut(s)	789, 1082
BtgI	CCRYGG	2 cut(s)	981, 1076
BtsCI	GGATG	7 cut(s)	134, 360, 1333, 1342, 1465, 1699, 2215
BtsI	GCAGTG	1 cut(s)	2169
BtsIMutI	CAGTG	2 cut(s)	1331, 2169
BtuMI	TCGCGA	1 cut(s)	42
BveI	ACCTGC	1 cut(s)	296
Cac8I	GCNNGC	8 cut(s)	77, 428, 1048, 1233, 1586, 1626, 1890, 2070
CciI	TCATGA	2 cut(s)	1597, 1675
CfoI	GCGC	3 cut(s)	89, 302, 1660
Cfr10I	RCCGGY	1 cut(s)	760
Cfr13I	GGNCC	1 cut(s)	1080
CseI	GACGC	4 cut(s)	68, 966, 1245, 1854
Csp6I	GTAC	5 cut(s)	496, 807, 1315, 1382, 2204
CviQI	GTAC	5 cut(s)	496, 807, 1315, 1382, 2204
DdeI	CTNAG	5 cut(s)	797, 1029, 1543, 1551, 1996
DpnI	GATC	2 cut(s)	1539, 1596
DpnII	GATC	2 cut(s)	1537, 1594
DraI	TTTAAA	2 cut(s)	174, 373
Eam1104I	CTCTTC	1 cut(s)	411
EarI	CTCTTC	1 cut(s)	411
Ecl136II	GAGCTC	2 cut(s)	837, 1525
Eco130I	CCWWGG	3 cut(s)	821, 981, 1076
Eco24I	GRGCYC	3 cut(s)	839, 1040, 1527
Eco32I	GATATC	1 cut(s)	1184
Eco53kI	GAGCTC	2 cut(s)	837, 1525
Eco57I	CTGAAG	3 cut(s)	462, 969, 1631
EcoICRI	GAGCTC	2 cut(s)	837, 1525
EcoRII	CCWGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
EcoRV	GATATC	1 cut(s)	1184
EcoT14I	CCWWGG	3 cut(s)	821, 981, 1076
EcoT22I	ATGCAT	3 cut(s)	1233, 1313, 2109
EcoT38I	GRGCYC	3 cut(s)	839, 1040, 1527
ErhI	CCWWGG	3 cut(s)	821, 981, 1076
Esp3I	CGTCTC	1 cut(s)	86
FalI	AAGNNNNNCTT	4 cut(s)	867, 899, 2106, 2138
FauNDI	CATATG	1 cut(s)	1654
FblI	GTMKAC	1 cut(s)	338
FokI	GGATG	7 cut(s)	141, 347, 1340, 1349, 1472, 1706, 2222
FriOI	GRGCYC	3 cut(s)	839, 1040, 1527
FspAI	RTGCGCAY	1 cut(s)	1659
FspBI	CTAG	6 cut(s)	279, 431, 822, 897, 1170, 1418
FspI	TGCGCA	1 cut(s)	1659
GlaI	GCGC	3 cut(s)	88, 301, 1659
GsaI	CCCAGC	1 cut(s)	1381
HaeIII	GGCC	2 cut(s)	789, 1082
HapII	CCGG	3 cut(s)	761, 1825, 2207
HgaI	GACGC	4 cut(s)	68, 966, 1245, 1854
HhaI	GCGC	3 cut(s)	89, 302, 1660
Hin6I	GCGC	3 cut(s)	87, 300, 1658
HinP1I	GCGC	3 cut(s)	87, 300, 1658
HincII	GTYRAC	1 cut(s)	828
HindII	GTYRAC	1 cut(s)	828
HindIII	AAGCTT	4 cut(s)	150, 1401, 1911, 2013
HinfI	GANTC	5 cut(s)	20, 232, 914, 1127, 1954
HpaII	CCGG	3 cut(s)	761, 1825, 2207
HphI	GGTGA	4 cut(s)	20, 523, 714, 1428
Hpy166II	GTNNAC	5 cut(s)	28, 339, 527, 828, 1730
Hpy188I	TCNGA	9 cut(s)	17, 103, 228, 240, 1065, 1261, 1347, 1611, 1725
Hpy188III	TCNNGA	8 cut(s)	41, 561, 639, 1187, 1598, 1676, 1825, 2054
Hpy8I	GTNNAC	5 cut(s)	28, 339, 527, 828, 1730
HpyCH4III	ACNGT	5 cut(s)	495, 535, 844, 1445, 1474
HpyF3I	CTNAG	5 cut(s)	797, 1029, 1543, 1551, 1996
HspAI	GCGC	3 cut(s)	87, 300, 1658
Kpn2I	TCCGGA	1 cut(s)	1824
Kzo9I	GATC	2 cut(s)	1537, 1594
LguI	GCTCTTC	1 cut(s)	411
LmnI	GCTCC	6 cut(s)	757, 930, 1055, 1199, 1552, 2029
LweI	GCATC	4 cut(s)	1318, 1442, 1732, 1825
MaeI	CTAG	6 cut(s)	279, 431, 822, 897, 1170, 1418
MaeIII	GTNAC	4 cut(s)	131, 1508, 2167, 2196
MalI	GATC	2 cut(s)	1539, 1596
MboI	GATC	2 cut(s)	1537, 1594
MfeI	CAATTG	3 cut(s)	116, 599, 1212
MhlI	GDGCHC	4 cut(s)	839, 1040, 1527, 1732
MlyI	GAGTC	1 cut(s)	14
MmeI	TCCRAC	2 cut(s)	1043, 1375
Mph1103I	ATGCAT	3 cut(s)	1233, 1313, 2109
MroI	TCCGGA	1 cut(s)	1824
MroXI	GAANNNNTTC	2 cut(s)	892, 1616
MseI	TTAA	7 cut(s)	173, 372, 1505, 1638, 1988, 2037, 2178
MslI	CAYNNNNRTG	1 cut(s)	1680
MspA1I	CMGCKG	2 cut(s)	452, 989
MspI	CCGG	3 cut(s)	761, 1825, 2207
MspR9I	CCNGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
MunI	CAATTG	3 cut(s)	116, 599, 1212
MvaI	CCWGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
MvnI	CGCG	1 cut(s)	42
NcoI	CCATGG	2 cut(s)	981, 1076
NdeI	CATATG	1 cut(s)	1654
NdeII	GATC	2 cut(s)	1537, 1594
NlaIV	GGNNCC	2 cut(s)	291, 1322
NmeAIII	GCCGAG	1 cut(s)	115
NmuCI	GTSAC	1 cut(s)	2167
NruI	TCGCGA	1 cut(s)	42
NsbI	TGCGCA	1 cut(s)	1659
NsiI	ATGCAT	3 cut(s)	1233, 1313, 2109
NspI	RCATGY	5 cut(s)	1235, 1315, 1892, 2072, 2107
NspV	TTCGAA	1 cut(s)	886
PaeI	GCATGC	3 cut(s)	1235, 1892, 2072
PagI	TCATGA	2 cut(s)	1597, 1675
PciSI	GCTCTTC	1 cut(s)	411
PdmI	GAANNNNTTC	2 cut(s)	892, 1616
PfeI	GAWTC	4 cut(s)	232, 914, 1127, 1954
PleI	GAGTC	1 cut(s)	14
PpsI	GAGTC	1 cut(s)	14
PshBI	ATTAAT	1 cut(s)	1988
PsiI	TTATAA	2 cut(s)	1755, 2091
Psp124BI	GAGCTC	2 cut(s)	839, 1527
Psp6I	CCWGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
PspFI	CCCAGC	1 cut(s)	1377
PspGI	CCWGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
PspN4I	GGNNCC	2 cut(s)	291, 1322
PspPI	GGNCC	1 cut(s)	1080
PsrI	GAACNNNNNNTAC	2 cut(s)	991, 1023
PvuII	CAGCTG	2 cut(s)	452, 989
RruI	TCGCGA	1 cut(s)	42
RsaI	GTAC	5 cut(s)	497, 808, 1316, 1383, 2205
RsaNI	GTAC	5 cut(s)	496, 807, 1315, 1382, 2204
RseI	CAYNNNNRTG	1 cut(s)	1680
SacI	GAGCTC	2 cut(s)	839, 1527
SapI	GCTCTTC	1 cut(s)	411
SaqAI	TTAA	7 cut(s)	173, 372, 1505, 1638, 1988, 2037, 2178
Sau3AI	GATC	2 cut(s)	1537, 1594
Sau96I	GGNCC	1 cut(s)	1080
SchI	GAGTC	1 cut(s)	14
ScrFI	CCNGG	5 cut(s)	1325, 1391, 1514, 1691, 1762
SduI	GDGCHC	4 cut(s)	839, 1040, 1527, 1732
SfaNI	GCATC	4 cut(s)	1318, 1442, 1732, 1825
SfcI	CTRYAG	5 cut(s)	387, 1041, 1470, 1579, 2228
SfuI	TTCGAA	1 cut(s)	886
SmiMI	CAYNNNNRTG	1 cut(s)	1680
SpeI	ACTAGT	1 cut(s)	1169
SphI	GCATGC	3 cut(s)	1235, 1892, 2072
SsiI	CCGC	5 cut(s)	55, 159, 758, 1251, 2095
SspI	AATATT	1 cut(s)	2045
SspMI	CTAG	6 cut(s)	279, 431, 822, 897, 1170, 1418
SstI	GAGCTC	2 cut(s)	839, 1527
StyD4I	CCNGG	5 cut(s)	1323, 1389, 1512, 1689, 1760
StyI	CCWWGG	3 cut(s)	821, 981, 1076
TaaI	ACNGT	5 cut(s)	495, 535, 844, 1445, 1474
TaqI	TCGA	2 cut(s)	886, 1122
TatI	WGTACW	1 cut(s)	1314
TauI	GCSGC	2 cut(s)	161, 2098
TfiI	GAWTC	4 cut(s)	232, 914, 1127, 1954
Tru1I	TTAA	7 cut(s)	173, 372, 1505, 1638, 1988, 2037, 2178
Tru9I	TTAA	7 cut(s)	173, 372, 1505, 1638, 1988, 2037, 2178
TscAI	CASTG	2 cut(s)	1338, 2176
TseFI	GTSAC	1 cut(s)	2167
Tsp45I	GTSAC	1 cut(s)	2167
TspGWI	ACGGA	2 cut(s)	13, 1123
TspRI	CASTG	2 cut(s)	1338, 2176
VneI	GTGCAC	1 cut(s)	1728
VspI	ATTAAT	1 cut(s)	1988
XapI	RAATTY	5 cut(s)	109, 643, 1263, 1615, 1646
XceI	RCATGY	5 cut(s)	1235, 1315, 1892, 2072, 2107
XmaJI	CCTAGG	1 cut(s)	821
XmiI	GTMKAC	1 cut(s)	338
XmnI	GAANNNNTTC	2 cut(s)	892, 1616
XspI	CTAG	6 cut(s)	279, 431, 822, 897, 1170, 1418
Zsp2I	ATGCAT	3 cut(s)	1233, 1313, 2109

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.