Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000897.1

Orthogroup ID

OG0005766

Physical Location & Seq

Genomic Coordinates Forward (+)

144277 .. 152483

Gene Structure 8207 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000897.1_g000018.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2394 bp

atgaccagcaacaaccgaaatgggaaggcaaggctactgcagagctacgaggtccaaaagcagaacaagtgtggcctttgctggccggaggacttcttcggcctacataagtggttcccaaccctccccacttgccttcctgtgcaaggcgtatccgggcagccaggctgtgtgcgctactgcgccggaattaagactccggttgatcgcgaaagcgaccggctagagcatgtgaactggtctaagcagcagctactgtccatagacccaagccagctgaactatagctattccattatagatgggaatattgggttcaactcgtacattgcaaccatacgagtgttgcccaaggaagatgggtgcagcattgtgtggaagtatgaggttgagccaattgaggggtggacactgatggatcttgacatgcttatcggccctggatcttcagttgttaccttgttcatatgttctcgttatttcttaatgcaggttccaaatggcgcagcaggtcattaccttcttgggcttatttataggtatactgatagaaggaaaagtgccatccatcactttaaacaggctttgactatagacccttcaatgtgggctgcgtatgaagagctgtgcgtgctaggttctgctgaagaagcagctgtggtttttggggaagctgctgctctctccatacaaaaacagtacctacatcatggattagcttctcaaagtttactcaccgtcaatgatgattgcaatttagtttctggaaggaactttagctttgaagatgttagtccaagacaattgaaactaatgcaaggcagtaatacaagagatagttctggaaattctcatgttattttaggaggagtttctggtcagcctacaaacggcagttctaacatatctttctataacactccttcaccaatgcctatgcagttgtcaggtatcgctccaccgccggtttgtagaaatgccctgccaaatggcctaaacctcagctctggtactgatagctctcctaggtcaactatgagctctaccgttcaaggtgggagaagaaagtttgttgatgaaggaaaacttcgaaaggtagctaacaatgagtcagctattcgattgttgtcaggtatcgctccaccgccggtttgtagaaatgccctgccaaatggcctaaacctcagctctggtactgatagctctcctaggtcaactatgagctctaccgttcaaggtgggagaagaaagtttgttgatgaaggaaaacttcgaaaggtagctaacaatgagtcagctattcgattgatttctagtagattatcttttgattctggcaaccgaaggagcaatagacttgctgctgaagcaggggctaacaccaatgcaagtgcgtccatggcagctggaaatggaactaccaatacatctaaaattggaagttctaagttgggctctgtagcacgctccttgacaagtcggaagggtcagccatgggccaatgaaaaccttgatgaaggcatacggaatgagacattcgatgattcccgttcaaatacagcagctatctctggttttactcccactagtgataccagatatcttgaacaagatggagcaacattgtcaattggtgggggtattatgcatgcttcaaaagttattagcggtgcgtcagaaatattgagccttttgagaactcttggggaaggttataggctttcatgcatgtacaggtgccaggatgcactggatgtctatctgaaacttccatacaagcattacaatacaggctgggtactctgccaggtgggaaaagcttattttgaattgctagattattttgaagctgatagggccttcagtctggctcgacaggcatcaccttacagtttagaaggaatggatgtatattctacagttctttatcttttgaacgaagatatgaagttaagttacctggcacaagagctcatatcaactgatcgcttagctcctcagtcttggtgtgcaatgggaaattgctatagcttgcagaaagatcatgaaactgctctgaagaatttccagcgagctgttcaacttaattcaaaattcacatatgcgcataccctttgtggtcatgaatatgtagccctggatgattttgagaatggaataaagagctatcagagtgcacttcggcttgatgcaaggcattataactcctggtttgggcttggaatgatttattttcggcaagagaagtttgagtttgcagagcatcacttccggacagctaaccaaataaatccatgttcttctgttattgcgtctaatcttggcacagcattgcatgctttacaggttccattggccatatcaatgttaaaattacatcttctgaaagtttaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005737 GO:0005819 GO:0005856 GO:0007275 GO:0007346 GO:0008150 GO:0009504 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010071 GO:0010154 GO:0015630 GO:0022414 GO:0022622 GO:0030154 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051726 GO:0061458 GO:0065007 GO:0090421 GO:0099402 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_16 TPR_19 TPR_2 TPR_8

Protein Analysis

797

Amino Acids

87.64

Weight (kDa)

8.48

Isoelectric Point (pI)

38.72

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20000 AT2G20000
fragaria_vesca	FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910
malus_domestica	MD02G1061000.v1.1 MD15G1194500.v1.1
prunus_persica	Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1
pyrus_communis	pycom02g05010 pycom15g17410
rosa_chinensis	RchiOBHm_Chr2g0091551 RchiOBHm_Chr2g0091631
rosa_laevigata	RLG00000016236
rosa_multiflora	Rmu_sc0000897.1_g000018
rosa_roxburghii	Rroxscaffold_2G00149940
rosa_rugosa	Rorug02G0018700 Rorug02G0018700
rosa_samantha	Rh2AG063900 Rh2BG063300 Rh2CG065000 Rh2DG063400
rosa_wichuraiana	Rw2G005650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	2202
Acc16I	TGCGCA	1 cut(s)	2106
Acc36I	ACCTGC	2 cut(s)	481, 500
AccB1I	GGYRCC	1 cut(s)	1737
AccI	GTMKAC	1 cut(s)	542
AccII	CGCG	1 cut(s)	210
AccIII	TCCGGA	1 cut(s)	2271
AciI	CCGC	3 cut(s)	962, 1145, 1668
AclWI	GGATC	2 cut(s)	426, 451
AcoI	YGGCCR	2 cut(s)	83, 2355
AcsI	RAATTY	3 cut(s)	847, 2062, 2093
AcuI	CTGAAG	5 cut(s)	432, 666, 1386, 1846, 2078
AfaI	GTAC	6 cut(s)	326, 701, 1012, 1195, 1733, 1800
AfiI	CCNNNNNNNGG	4 cut(s)	146, 401, 890, 2214
AhlI	ACTAGT	1 cut(s)	1586
AjnI	CCWGG	7 cut(s)	163, 439, 1740, 1806, 1959, 2136, 2207
Alw21I	GWGCWC	4 cut(s)	1043, 1226, 1974, 2179
Alw26I	GTCTC	1 cut(s)	1526
Alw44I	GTGCAC	1 cut(s)	2175
AlwI	GGATC	2 cut(s)	426, 451
AlwNI	CAGNNNCTG	1 cut(s)	256
Aor13HI	TCCGGA	1 cut(s)	2271
AoxI	GGCC	9 cut(s)	73, 83, 100, 436, 991, 1174, 1497, 1857, 2355
ApaLI	GTGCAC	1 cut(s)	2175
ApoI	RAATTY	3 cut(s)	847, 2062, 2093
Asp700I	GAANNNNTTC	1 cut(s)	2063
AspA2I	CCTAGG	2 cut(s)	1025, 1208
AspLEI	GCGC	4 cut(s)	177, 185, 506, 2107
AspS9I	GGNCC	4 cut(s)	52, 437, 1497, 1857
AsuC2I	CCSGG	1 cut(s)	157
AsuHPI	GGTGA	3 cut(s)	727, 918, 1875
AsuII	TTCGAA	2 cut(s)	1090, 1273
AvaII	GGWCC	1 cut(s)	52
AvrII	CCTAGG	2 cut(s)	1025, 1208
BaeGI	GKGCMC	1 cut(s)	2179
BalI	TGGCCA	1 cut(s)	2357
BanI	GGYRCC	1 cut(s)	1737
BanII	GRGCYC	4 cut(s)	1043, 1226, 1457, 1974
BarI	GAAGNNNNNNTAC	2 cut(s)	1940, 1972
Bbv12I	GWGCWC	4 cut(s)	1043, 1226, 1974, 2179
BbvCI	CCTCAGC	2 cut(s)	1001, 1184
BccI	CCATC	6 cut(s)	296, 353, 409, 572, 576, 1607
BceAI	ACGGC	1 cut(s)	907
BciT130I	CCWGG	7 cut(s)	165, 441, 1742, 1808, 1961, 2138, 2209
BciVI	GTATCC	1 cut(s)	163
BcnI	CCSGG	1 cut(s)	157
BcoDI	GTCTC	1 cut(s)	1526
BcuI	ACTAGT	1 cut(s)	1586
BfaI	CTAG	7 cut(s)	224, 635, 1026, 1209, 1314, 1587, 1835
BfmI	CTRYAG	6 cut(s)	38, 283, 591, 1458, 1917, 2026
BfuAI	ACCTGC	2 cut(s)	481, 500
BfuI	GTATCC	1 cut(s)	163
BlnI	CCTAGG	2 cut(s)	1025, 1208
BlpI	GCTNAGC	1 cut(s)	1990
Bme1390I	CCNGG	8 cut(s)	157, 165, 441, 1742, 1808, 1961, 2138, 2209
Bme18I	GGWCC	1 cut(s)	52
BmgT120I	GGNCC	4 cut(s)	52, 437, 1497, 1857
BmiI	GGNNCC	4 cut(s)	116, 495, 1739, 2349
BmrFI	CCNGG	8 cut(s)	157, 165, 441, 1742, 1808, 1961, 2138, 2209
BmsI	GCATC	4 cut(s)	1735, 1889, 2179, 2272
Bpu10I	CCTNAGC	2 cut(s)	1001, 1184
Bpu1102I	GCTNAGC	1 cut(s)	1990
Bpu14I	TTCGAA	2 cut(s)	1090, 1273
BpuMI	CCSGG	1 cut(s)	157
BsaBI	GATNNNNATC	1 cut(s)	1758
BsaJI	CCNNGG	7 cut(s)	351, 439, 1025, 1208, 1398, 1493, 2136
BsaWI	WCCGGW	2 cut(s)	199, 2271
Bsc4I	CCNNNNNNNGG	4 cut(s)	146, 401, 890, 2214
Bse118I	RCCGGY	3 cut(s)	219, 964, 1147
Bse1I	ACTGG	2 cut(s)	242, 1755
Bse3DI	GCAATG	3 cut(s)	327, 2019, 2330
Bse8I	GATNNNNATC	1 cut(s)	1758
BseAI	TCCGGA	1 cut(s)	2271
BseBI	CCWGG	7 cut(s)	165, 441, 1742, 1808, 1961, 2138, 2209
BseDI	CCNNGG	7 cut(s)	351, 439, 1025, 1208, 1398, 1493, 2136
BseGI	GGATG	5 cut(s)	564, 1750, 1759, 1912, 2146
BseJI	GATNNNNATC	1 cut(s)	1758
BseLI	CCNNNNNNNGG	4 cut(s)	146, 401, 890, 2214
BseMI	GCAATG	3 cut(s)	327, 2019, 2330
BseMII	CTCAG	3 cut(s)	1015, 1198, 2012
BseNI	ACTGG	2 cut(s)	242, 1755
BseRI	GAGGAG	2 cut(s)	882, 1986
BseSI	GKGCMC	1 cut(s)	2179
BseYI	CCCAGC	1 cut(s)	1794
BsgI	GTGCAG	1 cut(s)	385
Bsh1236I	CGCG	1 cut(s)	210
Bsh1285I	CGRYCG	1 cut(s)	220
BshFI	GGCC	9 cut(s)	75, 85, 102, 438, 993, 1176, 1499, 1859, 2357
BshNI	GGYRCC	1 cut(s)	1737
BsiEI	CGRYCG	1 cut(s)	220
BsiHKAI	GWGCWC	4 cut(s)	1043, 1226, 1974, 2179
BsiSI	CCGG	8 cut(s)	86, 156, 186, 200, 220, 965, 1148, 2272
BslI	CCNNNNNNNGG	4 cut(s)	146, 401, 890, 2214
BsmAI	GTCTC	1 cut(s)	1526
BsnI	GGCC	9 cut(s)	75, 85, 102, 438, 993, 1176, 1499, 1859, 2357
Bsp119I	TTCGAA	2 cut(s)	1090, 1273
Bsp1286I	GDGCHC	5 cut(s)	1043, 1226, 1457, 1974, 2179
Bsp13I	TCCGGA	1 cut(s)	2271
Bsp1407I	TGTACA	1 cut(s)	1731
Bsp143I	GATC	5 cut(s)	205, 418, 443, 1984, 2041
Bsp1720I	GCTNAGC	1 cut(s)	1990
Bsp19I	CCATGG	2 cut(s)	1398, 1493
Bsp68I	TCGCGA	1 cut(s)	210
BspACI	CCGC	3 cut(s)	962, 1145, 1668
BspANI	GGCC	9 cut(s)	75, 85, 102, 438, 993, 1176, 1499, 1859, 2357
BspCNI	CTCAG	3 cut(s)	1014, 1197, 2011
BspEI	TCCGGA	1 cut(s)	2271
BspFNI	CGCG	1 cut(s)	210
BspHI	TCATGA	2 cut(s)	2044, 2122
BspLI	GGNNCC	4 cut(s)	116, 495, 1739, 2349
BspMAI	CTGCAG	1 cut(s)	42
BspMI	ACCTGC	2 cut(s)	481, 500
BspPI	GGATC	2 cut(s)	426, 451
BspQI	GCTCTTC	1 cut(s)	615
BspT104I	TTCGAA	2 cut(s)	1090, 1273
BspT107I	GGYRCC	1 cut(s)	1737
BsrDI	GCAATG	3 cut(s)	327, 2019, 2330
BsrFI	RCCGGY	3 cut(s)	219, 964, 1147
BsrGI	TGTACA	1 cut(s)	1731
BsrI	ACTGG	2 cut(s)	242, 1755
BssAI	RCCGGY	3 cut(s)	219, 964, 1147
BssECI	CCNNGG	7 cut(s)	351, 439, 1025, 1208, 1398, 1493, 2136
BssMI	GATC	5 cut(s)	205, 418, 443, 1984, 2041
BssNAI	GTATAC	1 cut(s)	543
BssT1I	CCWWGG	5 cut(s)	351, 1025, 1208, 1398, 1493
Bst1107I	GTATAC	1 cut(s)	543
Bst2UI	CCWGG	7 cut(s)	165, 441, 1742, 1808, 1961, 2138, 2209
Bst4CI	ACNGT	7 cut(s)	258, 699, 739, 1048, 1231, 1892, 1921
Bst6I	CTCTTC	1 cut(s)	615
BstAPI	GCANNNNNTGC	1 cut(s)	2336
BstAUI	TGTACA	1 cut(s)	1731
BstBI	TTCGAA	2 cut(s)	1090, 1273
BstC8I	GCNNGC	8 cut(s)	83, 275, 632, 1465, 1650, 2033, 2073, 2337
BstDEI	CTNAG	6 cut(s)	243, 1001, 1184, 1446, 1990, 1998
BstDSI	CCRYGG	2 cut(s)	1398, 1493
BstENI	CCTNNNNNAGG	1 cut(s)	144
BstF5I	GGATG	5 cut(s)	564, 1750, 1759, 1912, 2146
BstFNI	CGCG	1 cut(s)	210
BstHHI	GCGC	4 cut(s)	177, 185, 506, 2107
BstKTI	GATC	5 cut(s)	208, 421, 446, 1987, 2044
BstMAI	GTCTC	1 cut(s)	1526
BstMBI	GATC	5 cut(s)	205, 418, 443, 1984, 2041
BstMCI	CGRYCG	1 cut(s)	220
BstMWI	GCNNNNNNNGC	8 cut(s)	174, 631, 650, 1367, 1400, 1856, 1877, 2336
BstNI	CCWGG	7 cut(s)	165, 441, 1742, 1808, 1961, 2138, 2209
BstNSI	RCATGY	5 cut(s)	233, 430, 1652, 1732, 2339
BstSCI	CCNGG	8 cut(s)	155, 163, 439, 1740, 1806, 1959, 2136, 2207
BstSFI	CTRYAG	6 cut(s)	38, 283, 591, 1458, 1917, 2026
BstSLI	GKGCMC	1 cut(s)	2179
BstUI	CGCG	1 cut(s)	210
BstX2I	RGATCY	2 cut(s)	418, 443
BstYI	RGATCY	2 cut(s)	418, 443
BstZ17I	GTATAC	1 cut(s)	543
BsuI	GTATCC	1 cut(s)	163
BsuRI	GGCC	9 cut(s)	75, 85, 102, 438, 993, 1176, 1499, 1859, 2357
BtgI	CCRYGG	2 cut(s)	1398, 1493
BtsCI	GGATG	5 cut(s)	564, 1750, 1759, 1912, 2146
BtsIMutI	CAGTG	2 cut(s)	410, 1748
BtuMI	TCGCGA	1 cut(s)	210
BveI	ACCTGC	2 cut(s)	481, 500
Cac8I	GCNNGC	8 cut(s)	83, 275, 632, 1465, 1650, 2033, 2073, 2337
CaiI	CAGNNNCTG	1 cut(s)	256
CciI	TCATGA	2 cut(s)	2044, 2122
CfoI	GCGC	4 cut(s)	177, 185, 506, 2107
Cfr10I	RCCGGY	3 cut(s)	219, 964, 1147
Cfr13I	GGNCC	4 cut(s)	52, 437, 1497, 1857
CseI	GACGC	3 cut(s)	1383, 1662, 2301
Csp6I	GTAC	6 cut(s)	325, 700, 1011, 1194, 1732, 1799
CviQI	GTAC	6 cut(s)	325, 700, 1011, 1194, 1732, 1799
DdeI	CTNAG	6 cut(s)	243, 1001, 1184, 1446, 1990, 1998
DpnI	GATC	5 cut(s)	207, 420, 445, 1986, 2043
DpnII	GATC	5 cut(s)	205, 418, 443, 1984, 2041
DraI	TTTAAA	1 cut(s)	577
EaeI	YGGCCR	2 cut(s)	83, 2355
Eam1104I	CTCTTC	1 cut(s)	615
EarI	CTCTTC	1 cut(s)	615
Ecl136II	GAGCTC	3 cut(s)	1041, 1224, 1972
Eco130I	CCWWGG	5 cut(s)	351, 1025, 1208, 1398, 1493
Eco24I	GRGCYC	4 cut(s)	1043, 1226, 1457, 1974
Eco32I	GATATC	1 cut(s)	1601
Eco47I	GGWCC	1 cut(s)	52
Eco53kI	GAGCTC	3 cut(s)	1041, 1224, 1972
Eco57I	CTGAAG	5 cut(s)	432, 666, 1386, 1846, 2078
EcoICRI	GAGCTC	3 cut(s)	1041, 1224, 1972
EcoNI	CCTNNNNNAGG	1 cut(s)	144
EcoO109I	RGGNCCY	1 cut(s)	1857
EcoRII	CCWGG	7 cut(s)	163, 439, 1740, 1806, 1959, 2136, 2207
EcoRV	GATATC	1 cut(s)	1601
EcoT14I	CCWWGG	5 cut(s)	351, 1025, 1208, 1398, 1493
EcoT22I	ATGCAT	2 cut(s)	1650, 1730
EcoT38I	GRGCYC	4 cut(s)	1043, 1226, 1457, 1974
ErhI	CCWWGG	5 cut(s)	351, 1025, 1208, 1398, 1493
FalI	AAGNNNNNCTT	4 cut(s)	1071, 1103, 1254, 1286
FauNDI	CATATG	2 cut(s)	467, 2101
FblI	GTMKAC	1 cut(s)	542
FokI	GGATG	5 cut(s)	551, 1757, 1766, 1919, 2153
FriOI	GRGCYC	4 cut(s)	1043, 1226, 1457, 1974
FspAI	RTGCGCAY	1 cut(s)	2106
FspBI	CTAG	7 cut(s)	224, 635, 1026, 1209, 1314, 1587, 1835
FspI	TGCGCA	1 cut(s)	2106
GlaI	GCGC	4 cut(s)	176, 184, 505, 2106
GsaI	CCCAGC	1 cut(s)	1798
HaeIII	GGCC	9 cut(s)	75, 85, 102, 438, 993, 1176, 1499, 1859, 2357
HapII	CCGG	8 cut(s)	86, 156, 186, 200, 220, 965, 1148, 2272
HgaI	GACGC	3 cut(s)	1383, 1662, 2301
HhaI	GCGC	4 cut(s)	177, 185, 506, 2107
Hin6I	GCGC	4 cut(s)	175, 183, 504, 2105
HinP1I	GCGC	4 cut(s)	175, 183, 504, 2105
HincII	GTYRAC	2 cut(s)	1032, 1215
HindII	GTYRAC	2 cut(s)	1032, 1215
HindIII	AAGCTT	1 cut(s)	1818
HinfI	GANTC	5 cut(s)	196, 1109, 1292, 1331, 1544
HpaII	CCGG	8 cut(s)	86, 156, 186, 200, 220, 965, 1148, 2272
HphI	GGTGA	3 cut(s)	727, 918, 1875
Hpy166II	GTNNAC	7 cut(s)	235, 408, 543, 731, 1032, 1215, 2177
Hpy188I	TCNGA	6 cut(s)	1482, 1678, 1764, 2058, 2172, 2385
Hpy188III	TCNNGA	8 cut(s)	209, 422, 765, 843, 1604, 2045, 2123, 2272
Hpy8I	GTNNAC	7 cut(s)	235, 408, 543, 731, 1032, 1215, 2177
HpyCH4III	ACNGT	7 cut(s)	258, 699, 739, 1048, 1231, 1892, 1921
HpyF10VI	GCNNNNNNNGC	8 cut(s)	174, 631, 650, 1367, 1400, 1856, 1877, 2336
HpyF3I	CTNAG	6 cut(s)	243, 1001, 1184, 1446, 1990, 1998
HspAI	GCGC	4 cut(s)	175, 183, 504, 2105
Kpn2I	TCCGGA	1 cut(s)	2271
Kzo9I	GATC	5 cut(s)	205, 418, 443, 1984, 2041
LguI	GCTCTTC	1 cut(s)	615
LmnI	GCTCC	6 cut(s)	961, 1144, 1347, 1472, 1616, 1999
LweI	GCATC	4 cut(s)	1735, 1889, 2179, 2272
MaeI	CTAG	7 cut(s)	224, 635, 1026, 1209, 1314, 1587, 1835
MaeIII	GTNAC	2 cut(s)	454, 1955
MalI	GATC	5 cut(s)	207, 420, 445, 1986, 2043
MboI	GATC	5 cut(s)	205, 418, 443, 1984, 2041
MfeI	CAATTG	3 cut(s)	396, 803, 1629
MflI	RGATCY	2 cut(s)	418, 443
MhlI	GDGCHC	5 cut(s)	1043, 1226, 1457, 1974, 2179
MlsI	TGGCCA	1 cut(s)	2357
MluNI	TGGCCA	1 cut(s)	2357
MlyI	GAGTC	3 cut(s)	190, 1118, 1301
MmeI	TCCRAC	1 cut(s)	1460
MnlI	CCTC	9 cut(s)	43, 82, 134, 379, 394, 860, 1010, 1193, 2007
Mox20I	TGGCCA	1 cut(s)	2357
Mph1103I	ATGCAT	2 cut(s)	1650, 1730
MroI	TCCGGA	1 cut(s)	2271
MroXI	GAANNNNTTC	1 cut(s)	2063
MscI	TGGCCA	1 cut(s)	2357
MseI	TTAA	7 cut(s)	192, 485, 576, 1952, 2085, 2369, 2392
MslI	CAYNNNNRTG	3 cut(s)	341, 2127, 2363
Msp20I	TGGCCA	1 cut(s)	2357
MspA1I	CMGCKG	3 cut(s)	277, 656, 1406
MspI	CCGG	8 cut(s)	86, 156, 186, 200, 220, 965, 1148, 2272
MspR9I	CCNGG	8 cut(s)	157, 165, 441, 1742, 1808, 1961, 2138, 2209
MunI	CAATTG	3 cut(s)	396, 803, 1629
MvaI	CCWGG	7 cut(s)	165, 441, 1742, 1808, 1961, 2138, 2209
MvnI	CGCG	1 cut(s)	210
MwoI	GCNNNNNNNGC	8 cut(s)	174, 631, 650, 1367, 1400, 1856, 1877, 2336
NciI	CCSGG	1 cut(s)	157
NcoI	CCATGG	2 cut(s)	1398, 1493
NdeI	CATATG	2 cut(s)	467, 2101
NdeII	GATC	5 cut(s)	205, 418, 443, 1984, 2041
NlaIV	GGNNCC	4 cut(s)	116, 495, 1739, 2349
NruI	TCGCGA	1 cut(s)	210
NsbI	TGCGCA	1 cut(s)	2106
NsiI	ATGCAT	2 cut(s)	1650, 1730
NspI	RCATGY	5 cut(s)	233, 430, 1652, 1732, 2339
NspV	TTCGAA	2 cut(s)	1090, 1273
PaeI	GCATGC	2 cut(s)	1652, 2339
PagI	TCATGA	2 cut(s)	2044, 2122
PciSI	GCTCTTC	1 cut(s)	615
PdmI	GAANNNNTTC	1 cut(s)	2063
PfeI	GAWTC	2 cut(s)	1331, 1544
PleI	GAGTC	3 cut(s)	190, 1117, 1300
PpsI	GAGTC	3 cut(s)	190, 1117, 1300
PsiI	TTATAA	1 cut(s)	2202
Psp124BI	GAGCTC	3 cut(s)	1043, 1226, 1974
Psp6I	CCWGG	7 cut(s)	163, 439, 1740, 1806, 1959, 2136, 2207
PspFI	CCCAGC	1 cut(s)	1794
PspGI	CCWGG	7 cut(s)	163, 439, 1740, 1806, 1959, 2136, 2207
PspN4I	GGNNCC	4 cut(s)	116, 495, 1739, 2349
PspPI	GGNCC	4 cut(s)	52, 437, 1497, 1857
PsrI	GAACNNNNNNTAC	2 cut(s)	1408, 1440
PstI	CTGCAG	1 cut(s)	42
PstNI	CAGNNNCTG	1 cut(s)	256
PsuI	RGATCY	2 cut(s)	418, 443
PvuII	CAGCTG	3 cut(s)	277, 656, 1406
RruI	TCGCGA	1 cut(s)	210
RsaI	GTAC	6 cut(s)	326, 701, 1012, 1195, 1733, 1800
RsaNI	GTAC	6 cut(s)	325, 700, 1011, 1194, 1732, 1799
RseI	CAYNNNNRTG	3 cut(s)	341, 2127, 2363
SacI	GAGCTC	3 cut(s)	1043, 1226, 1974
SapI	GCTCTTC	1 cut(s)	615
SaqAI	TTAA	7 cut(s)	192, 485, 576, 1952, 2085, 2369, 2392
Sau3AI	GATC	5 cut(s)	205, 418, 443, 1984, 2041
Sau96I	GGNCC	4 cut(s)	52, 437, 1497, 1857
SchI	GAGTC	3 cut(s)	190, 1118, 1301
ScrFI	CCNGG	8 cut(s)	157, 165, 441, 1742, 1808, 1961, 2138, 2209
SduI	GDGCHC	5 cut(s)	1043, 1226, 1457, 1974, 2179
SfaNI	GCATC	4 cut(s)	1735, 1889, 2179, 2272
SfcI	CTRYAG	6 cut(s)	38, 283, 591, 1458, 1917, 2026
SfuI	TTCGAA	2 cut(s)	1090, 1273
SinI	GGWCC	1 cut(s)	52
SmiMI	CAYNNNNRTG	3 cut(s)	341, 2127, 2363
SpeI	ACTAGT	1 cut(s)	1586
SphI	GCATGC	2 cut(s)	1652, 2339
SsiI	CCGC	3 cut(s)	962, 1145, 1668
SspI	AATATT	2 cut(s)	310, 1683
SspMI	CTAG	7 cut(s)	224, 635, 1026, 1209, 1314, 1587, 1835
SstI	GAGCTC	3 cut(s)	1043, 1226, 1974
StyD4I	CCNGG	8 cut(s)	155, 163, 439, 1740, 1806, 1959, 2136, 2207
StyI	CCWWGG	5 cut(s)	351, 1025, 1208, 1398, 1493
TaaI	ACNGT	7 cut(s)	258, 699, 739, 1048, 1231, 1892, 1921
TaqI	TCGA	6 cut(s)	1090, 1120, 1273, 1303, 1539, 1873
TatI	WGTACW	1 cut(s)	1731
TfiI	GAWTC	2 cut(s)	1331, 1544
Tru1I	TTAA	7 cut(s)	192, 485, 576, 1952, 2085, 2369, 2392
Tru9I	TTAA	7 cut(s)	192, 485, 576, 1952, 2085, 2369, 2392
TscAI	CASTG	2 cut(s)	417, 1755
TspGWI	ACGGA	1 cut(s)	1540
TspRI	CASTG	2 cut(s)	417, 1755
VneI	GTGCAC	1 cut(s)	2175
VpaK11BI	GGWCC	1 cut(s)	52
XagI	CCTNNNNNAGG	1 cut(s)	144
XapI	RAATTY	3 cut(s)	847, 2062, 2093
XceI	RCATGY	5 cut(s)	233, 430, 1652, 1732, 2339
XcmI	CCANNNNNNNNNTGG	1 cut(s)	402
XmaJI	CCTAGG	2 cut(s)	1025, 1208
XmiI	GTMKAC	1 cut(s)	542
XmnI	GAANNNNTTC	1 cut(s)	2063
XspI	CTAG	7 cut(s)	224, 635, 1026, 1209, 1314, 1587, 1835
Zsp2I	ATGCAT	2 cut(s)	1650, 1730

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.