Basic Information

Type: gene

Biological Identity

Species

rosa_chinensis

Chromosome

Orthogroup ID

OG0005766

Physical Location & Seq

Genomic Coordinates Reverse (-)

5285791 .. 5293969

Gene Structure 8179 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

PRQ46680

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2283 bp

ATGGAAGCCATACTCCGAGACTCCGTTCACCACAGCCTTCGCGATTTCCTCCACCGCAACGCCATTTTCCTCTGCGAGCGTCTCTGCGCCGAGTTCCCCTCCGAGACAAATTTGCAATTGTTAGCTGGATGTTACTTGCATAGTAATCAAGCTTATGCCGCATACCATATTTTAAAGGGAACACAAGTGGCTCAATCACGCTACTTGTTTGCTATGTCATGCTATCAGATGAATCTTCTGAATGAGGCAGAAGCAGCATTATGCCCCCCTAATGAGCCTAGTGCAGAGGTTCCAAATGGCGCAGCAGGTCATTACCTTCTTGGGCTTATTTATAGGTATACTGATAGAAGGAAAAGTGCCATCCATCACTTTAAACAGGCTTTGACTATAGACCCTTCAATGTGGGCTGCATATGAGGAGCTGTGCGTGCTAGGTTCTGCTGAAGAAGCAGCTGTGGTTTTTGGGGAAGCTGCTGCTCTCTCCATACAAAAACAGTACCTACATCATGGATTAGCTTCTCAAAGTTTACTCACCGTCAATGATGATTGCAATTTAGTTTCTGGAAGGAACTTTAGCTTTGAAGATGTTAGTCCAAGACAATTGAAACTAATGCAAGGCAGTAATACGAGAGATAGTTCTGGAAATTCTCATGTTATTTTAGGAGGAGTTTCTGGTCAGCCTACAAACGGCAGTTCTAACATATCTTTCTATAACACTCCTTCACCAATGCCTATGCAGTTGTCAGGTATCGCTCCACCGCCGGTTTGTAGAAATGTCCTGCCAAATGGCCTAAACCTCAGCTCTGGTACTGATAGCTCTCCTAGGTCAACTATGAGCTCTACCATTCAAGGTGGGAGAAGAAAGTTTGTTGATGAAGGAAAACTTCGAAAGGTAGCTAACAATGAGTCAGCTATTCGATTGATTTCTAGTAGATTATCTTTTGATTCTGGCAACCGAAGGAGCAATAGACTTGCTGCTGAAGCAGGGGCTAACACCAATGCAAGTGCGTCCATGGCAGCTGGAAATGGAACTACCAATACATCTAAAATTGGAAGTTCTAAGTTGGGCTCTGTAGCACGCTCCTTGACAAGTCGGAAGGGTCAGCCATGGGCCAATGAAAACCTTGATGAAGGCATACGGAATGAGACATTCGATGATTCCCGTTCAAATACAGCAGCTATCTCTGGTTTTACTCCCACTAGTGATACCAGATATCTTGAACAAGATGGAGCAACATTGTCAATTGGTGGGGGTATTATGCATGCTTCAAAAGTTATTAGTGGTGCTTCAGAAATATTGAGCCTTTTGAGAACTCTTGGGGAAGGTTATAGGCTTTCATGCATGTACAGGTGCCAGGATGCACTGGATGTCTATCTGAAACTTCCATACAAGCATTACAATACAGGCTGGGTACTCTGCCAGGTTGGAAAAGCTTATTTTGAATTGCTAGATTATTTTGAAGCTGATAGGGCCTTCAGTCTGGCTCGACAGGCATCACCTTACAGTTTAGAAGGAATGGATGTATATTCTACAGTTCTTTATCTTTTGAACGAAGATATGAAGTTAAGTTACCTGGCACAAGAGCTCATATCAACTGATCGCTTAGCTCCTCAGTCTTGGTGTGCAATGGGAAATTGCTATAGCTTGCAGAAAGATCATGAAACTGCTCTGAAGAATTTCCAGCGAGCTGTTCAACTTAATTCAAATTCACATATGCGCATACCCTTTGTGGTCATGACCCTGGATGATTTTGAGAATGGAATAAAGAGCTATCAGAGTGCACTTCGGCTTGATGCAAGGCATTATAACTCCTGGTTTGGGCTTGGAATGATTTATTTTCGGCAAGAGAAGTTTGAGTTTGCAGAGCATCACTTCCGGACAGCTAACCAAATAAATCCATGTTCTTCTGTTATTGCGTCTAATCTTGGCACAGCATTGCATGCTTTACAGAGAAGTGATGAAGCTTTGGCGATAATGGAGAAGGCTATTAGAGCAGATGAGAAGAATCCTGTTCCCATGTATCAAAAGGCTAATATATTAATGAGCTTAGAAAAGTTTGATGAAGCTTTAGCAGTCTTGGAGCAGCTTAATGAATATTCTCCTCGTGAAAGTAGTGTGCATGCTTTGATGGGTAGGATTTATAAGCGGCGAAACATGCATGACAAAGCAATGCTTCATTTTGGCATTGCATTGGATTTGAAACCATCTACAACTGATGTCACTGCCATTAAGGCTGCCATTGAGAGGTTACTTGTACCGGATGAAATAGAAGACAACCTGTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000151 GO:0000152 GO:0003006 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005680 GO:0005737 GO:0005819 GO:0005856 GO:0007275 GO:0007346 GO:0008150 GO:0009504 GO:0009653 GO:0009719 GO:0009725 GO:0009733 GO:0009790 GO:0009791 GO:0009793 GO:0009888 GO:0009933 GO:0009987 GO:0010014 GO:0010015 GO:0010033 GO:0010071 GO:0010154 GO:0015630 GO:0022414 GO:0022622 GO:0030154 GO:0031461 GO:0032501 GO:0032502 GO:0032991 GO:0042221 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0044422 GO:0044424 GO:0044428 GO:0044430 GO:0044444 GO:0044446 GO:0044464 GO:0048316 GO:0048364 GO:0048507 GO:0048508 GO:0048532 GO:0048608 GO:0048731 GO:0048829 GO:0048856 GO:0048869 GO:0050789 GO:0050794 GO:0050896 GO:0051726 GO:0061458 GO:0065007 GO:0090421 GO:0099402 GO:1902494 GO:1905392 GO:1990234

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 ko04113 ko04114 ko04120 ko04914 ko05166 map04110 map04111 map04113 map04114 map04120 map04914 map05166

Pfam Domains

Protein Families

ANAPC3 TPR_1 TPR_16 TPR_19 TPR_2 TPR_8

Protein Analysis

760

Amino Acids

84.05

Weight (kDa)

6.44

Isoelectric Point (pI)

42.62

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
ANAPC3	PF12895	17 - 88	1e-16	Anaphase-promoting complex, cyclosome, subunit 3
TPR_1	PF00515	538 - 569	9.9e-08	Tetratricopeptide repeat
TPR_19	PF14559	648 - 713	1.2e-09	Tetratricopeptide repeat
TPR-S	PF20308	653 - 720	4.6e-06	Tetratricopeptide Repeats-Sensor

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0005766)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT2G20000 AT2G20000
fragaria_vesca	FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910 FvH4_1g05910
malus_domestica	MD02G1061000.v1.1 MD15G1194500.v1.1
prunus_persica	Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1 Prupe.7G222000_v2.0.a1
pyrus_communis	pycom02g05010 pycom15g17410
rosa_chinensis	RchiOBHm_Chr2g0091551 RchiOBHm_Chr2g0091631
rosa_laevigata	RLG00000016236
rosa_multiflora	Rmu_sc0000897.1_g000018
rosa_roxburghii	Rroxscaffold_2G00149940
rosa_rugosa	Rorug02G0018700 Rorug02G0018700
rosa_samantha	Rh2AG063900 Rh2BG063300 Rh2CG065000 Rh2DG063400
rosa_wichuraiana	Rw2G005650

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	2 cut(s)	1806, 2142
Acc16I	TGCGCA	1 cut(s)	1718
Acc36I	ACCTGC	1 cut(s)	296
AccB1I	GGYRCC	1 cut(s)	1350
AccI	GTMKAC	1 cut(s)	338
AccII	CGCG	1 cut(s)	42
AccIII	TCCGGA	1 cut(s)	1875
AciI	CCGC	4 cut(s)	55, 159, 758, 2146
AcsI	RAATTY	4 cut(s)	109, 643, 1675, 1705
AcuI	CTGAAG	5 cut(s)	462, 999, 1272, 1459, 1691
AfaI	GTAC	5 cut(s)	497, 808, 1346, 1413, 2256
AfiI	CCNNNNNNNGG	3 cut(s)	686, 1818, 2244
AhlI	ACTAGT	1 cut(s)	1199
AjnI	CCWGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
Alw21I	GWGCWC	3 cut(s)	839, 1587, 1783
Alw26I	GTCTC	4 cut(s)	12, 86, 98, 1139
Alw44I	GTGCAC	1 cut(s)	1779
Aor13HI	TCCGGA	1 cut(s)	1875
AoxI	GGCC	3 cut(s)	787, 1110, 1470
ApaLI	GTGCAC	1 cut(s)	1779
ApoI	RAATTY	4 cut(s)	109, 643, 1675, 1705
AseI	ATTAAT	1 cut(s)	2039
Asp700I	GAANNNNTTC	1 cut(s)	1676
AspA2I	CCTAGG	1 cut(s)	821
AspLEI	GCGC	3 cut(s)	89, 302, 1719
AspS9I	GGNCC	2 cut(s)	1110, 1470
AsuHPI	GGTGA	4 cut(s)	20, 523, 714, 1488
AsuII	TTCGAA	1 cut(s)	886
AvrII	CCTAGG	1 cut(s)	821
BaeGI	GKGCMC	1 cut(s)	1783
BanI	GGYRCC	1 cut(s)	1350
BanII	GRGCYC	3 cut(s)	839, 1070, 1587
BarI	GAAGNNNNNNTAC	2 cut(s)	1553, 1585
BauI	CACGAG	1 cut(s)	2103
BbsI	GAAGAC	1 cut(s)	2277
Bbv12I	GWGCWC	3 cut(s)	839, 1587, 1783
BbvCI	CCTCAGC	1 cut(s)	797
BccI	CCATC	5 cut(s)	368, 372, 1220, 2122, 2212
BceAI	ACGGC	1 cut(s)	703
BciT130I	CCWGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
BcoDI	GTCTC	4 cut(s)	12, 86, 98, 1139
BcuI	ACTAGT	1 cut(s)	1199
BfaI	CTAG	6 cut(s)	279, 431, 822, 927, 1200, 1448
BfmI	CTRYAG	5 cut(s)	387, 1071, 1530, 1639, 2279
BfuAI	ACCTGC	1 cut(s)	296
BglI	GCCNNNNNGGC	1 cut(s)	2231
BlnI	CCTAGG	1 cut(s)	821
BlpI	GCTNAGC	1 cut(s)	1603
Bme1390I	CCNGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
BmgT120I	GGNCC	2 cut(s)	1110, 1470
BmiI	GGNNCC	2 cut(s)	291, 1352
BmrFI	CCNGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
BmsI	GCATC	4 cut(s)	1348, 1502, 1783, 1876
BpiI	GAAGAC	1 cut(s)	2277
BplI	GAGNNNNNCTC	2 cut(s)	83, 115
Bpu10I	CCTNAGC	1 cut(s)	797
Bpu1102I	GCTNAGC	1 cut(s)	1603
Bpu14I	TTCGAA	1 cut(s)	886
BsaBI	GATNNNNATC	1 cut(s)	1371
BsaJI	CCNNGG	4 cut(s)	821, 1011, 1106, 1740
BsaWI	WCCGGW	2 cut(s)	1875, 2257
Bsc4I	CCNNNNNNNGG	3 cut(s)	686, 1818, 2244
Bse118I	RCCGGY	1 cut(s)	760
Bse1I	ACTGG	1 cut(s)	1368
Bse3DI	GCAATG	4 cut(s)	1632, 1934, 2175, 2184
Bse8I	GATNNNNATC	1 cut(s)	1371
BseAI	TCCGGA	1 cut(s)	1875
BseBI	CCWGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
BseDI	CCNNGG	4 cut(s)	821, 1011, 1106, 1740
BseGI	GGATG	7 cut(s)	134, 360, 1363, 1372, 1525, 1750, 2266
BseJI	GATNNNNATC	1 cut(s)	1371
BseLI	CCNNNNNNNGG	3 cut(s)	686, 1818, 2244
BseMI	GCAATG	4 cut(s)	1632, 1934, 2175, 2184
BseMII	CTCAG	2 cut(s)	811, 1625
BseNI	ACTGG	1 cut(s)	1368
BseRI	GAGGAG	4 cut(s)	431, 678, 1599, 2091
BseSI	GKGCMC	1 cut(s)	1783
BseYI	CCCAGC	1 cut(s)	1407
BsgI	GTGCAG	1 cut(s)	303
Bsh1236I	CGCG	1 cut(s)	42
BshFI	GGCC	3 cut(s)	789, 1112, 1472
BshNI	GGYRCC	1 cut(s)	1350
BsiHKAI	GWGCWC	3 cut(s)	839, 1587, 1783
BsiSI	CCGG	3 cut(s)	761, 1876, 2258
BslI	CCNNNNNNNGG	3 cut(s)	686, 1818, 2244
BsmAI	GTCTC	4 cut(s)	12, 86, 98, 1139
BsmBI	CGTCTC	1 cut(s)	86
BsnI	GGCC	3 cut(s)	789, 1112, 1472
Bsp119I	TTCGAA	1 cut(s)	886
Bsp1286I	GDGCHC	4 cut(s)	839, 1070, 1587, 1783
Bsp13I	TCCGGA	1 cut(s)	1875
Bsp1407I	TGTACA	1 cut(s)	1344
Bsp143I	GATC	2 cut(s)	1597, 1654
Bsp1720I	GCTNAGC	1 cut(s)	1603
Bsp19I	CCATGG	2 cut(s)	1011, 1106
Bsp68I	TCGCGA	1 cut(s)	42
BspACI	CCGC	4 cut(s)	55, 159, 758, 2146
BspANI	GGCC	3 cut(s)	789, 1112, 1472
BspCNI	CTCAG	2 cut(s)	810, 1624
BspEI	TCCGGA	1 cut(s)	1875
BspFNI	CGCG	1 cut(s)	42
BspHI	TCATGA	2 cut(s)	1657, 1734
BspLI	GGNNCC	2 cut(s)	291, 1352
BspMI	ACCTGC	1 cut(s)	296
BspT104I	TTCGAA	1 cut(s)	886
BspT107I	GGYRCC	1 cut(s)	1350
BsrDI	GCAATG	4 cut(s)	1632, 1934, 2175, 2184
BsrFI	RCCGGY	1 cut(s)	760
BsrGI	TGTACA	1 cut(s)	1344
BsrI	ACTGG	1 cut(s)	1368
BssAI	RCCGGY	1 cut(s)	760
BssECI	CCNNGG	4 cut(s)	821, 1011, 1106, 1740
BssMI	GATC	2 cut(s)	1597, 1654
BssNAI	GTATAC	1 cut(s)	339
BssSI	CACGAG	1 cut(s)	2103
BssT1I	CCWWGG	3 cut(s)	821, 1011, 1106
Bst1107I	GTATAC	1 cut(s)	339
Bst2BI	CACGAG	1 cut(s)	2103
Bst2UI	CCWGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
Bst4CI	ACNGT	4 cut(s)	495, 535, 1505, 1534
BstAPI	GCANNNNNTGC	1 cut(s)	1940
BstAUI	TGTACA	1 cut(s)	1344
BstBI	TTCGAA	1 cut(s)	886
BstC8I	GCNNGC	8 cut(s)	77, 428, 1078, 1263, 1646, 1686, 1941, 2121
BstDEI	CTNAG	5 cut(s)	797, 1059, 1603, 1611, 2047
BstDSI	CCRYGG	2 cut(s)	1011, 1106
BstF5I	GGATG	7 cut(s)	134, 360, 1363, 1372, 1525, 1750, 2266
BstFNI	CGCG	1 cut(s)	42
BstHHI	GCGC	3 cut(s)	89, 302, 1719
BstKTI	GATC	2 cut(s)	1600, 1657
BstMAI	GTCTC	4 cut(s)	12, 86, 98, 1139
BstMBI	GATC	2 cut(s)	1597, 1654
BstNI	CCWGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
BstNSI	RCATGY	5 cut(s)	1265, 1345, 1943, 2123, 2158
BstSCI	CCNGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
BstSFI	CTRYAG	5 cut(s)	387, 1071, 1530, 1639, 2279
BstSLI	GKGCMC	1 cut(s)	1783
BstUI	CGCG	1 cut(s)	42
BstV2I	GAAGAC	1 cut(s)	2277
BstZ17I	GTATAC	1 cut(s)	339
BsuRI	GGCC	3 cut(s)	789, 1112, 1472
BtgI	CCRYGG	2 cut(s)	1011, 1106
BtsCI	GGATG	7 cut(s)	134, 360, 1363, 1372, 1525, 1750, 2266
BtsI	GCAGTG	1 cut(s)	2220
BtsIMutI	CAGTG	2 cut(s)	1361, 2220
BtuMI	TCGCGA	1 cut(s)	42
BveI	ACCTGC	1 cut(s)	296
Cac8I	GCNNGC	8 cut(s)	77, 428, 1078, 1263, 1646, 1686, 1941, 2121
CciI	TCATGA	2 cut(s)	1657, 1734
CfoI	GCGC	3 cut(s)	89, 302, 1719
Cfr10I	RCCGGY	1 cut(s)	760
Cfr13I	GGNCC	2 cut(s)	1110, 1470
CseI	GACGC	3 cut(s)	68, 996, 1905
Csp6I	GTAC	5 cut(s)	496, 807, 1345, 1412, 2255
CviQI	GTAC	5 cut(s)	496, 807, 1345, 1412, 2255
DdeI	CTNAG	5 cut(s)	797, 1059, 1603, 1611, 2047
DpnI	GATC	2 cut(s)	1599, 1656
DpnII	GATC	2 cut(s)	1597, 1654
DraI	TTTAAA	2 cut(s)	174, 373
Ecl136II	GAGCTC	2 cut(s)	837, 1585
Eco130I	CCWWGG	3 cut(s)	821, 1011, 1106
Eco24I	GRGCYC	3 cut(s)	839, 1070, 1587
Eco32I	GATATC	1 cut(s)	1214
Eco53kI	GAGCTC	2 cut(s)	837, 1585
Eco57I	CTGAAG	5 cut(s)	462, 999, 1272, 1459, 1691
EcoICRI	GAGCTC	2 cut(s)	837, 1585
EcoO109I	RGGNCCY	1 cut(s)	1470
EcoRII	CCWGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
EcoRV	GATATC	1 cut(s)	1214
EcoT14I	CCWWGG	3 cut(s)	821, 1011, 1106
EcoT22I	ATGCAT	3 cut(s)	1263, 1343, 2160
EcoT38I	GRGCYC	3 cut(s)	839, 1070, 1587
ErhI	CCWWGG	3 cut(s)	821, 1011, 1106
Esp3I	CGTCTC	1 cut(s)	86
FalI	AAGNNNNNCTT	4 cut(s)	867, 899, 2157, 2189
FauNDI	CATATG	2 cut(s)	412, 1713
FblI	GTMKAC	1 cut(s)	338
FokI	GGATG	7 cut(s)	141, 347, 1370, 1379, 1532, 1757, 2273
FriOI	GRGCYC	3 cut(s)	839, 1070, 1587
FspAI	RTGCGCAY	1 cut(s)	1718
FspBI	CTAG	6 cut(s)	279, 431, 822, 927, 1200, 1448
FspI	TGCGCA	1 cut(s)	1718
GlaI	GCGC	3 cut(s)	88, 301, 1718
GsaI	CCCAGC	1 cut(s)	1411
HaeIII	GGCC	3 cut(s)	789, 1112, 1472
HapII	CCGG	3 cut(s)	761, 1876, 2258
HgaI	GACGC	3 cut(s)	68, 996, 1905
HhaI	GCGC	3 cut(s)	89, 302, 1719
Hin6I	GCGC	3 cut(s)	87, 300, 1717
HinP1I	GCGC	3 cut(s)	87, 300, 1717
HincII	GTYRAC	1 cut(s)	828
HindII	GTYRAC	1 cut(s)	828
HindIII	AAGCTT	4 cut(s)	150, 1431, 1962, 2064
HinfI	GANTC	6 cut(s)	20, 232, 905, 944, 1157, 2005
HpaII	CCGG	3 cut(s)	761, 1876, 2258
HphI	GGTGA	4 cut(s)	20, 523, 714, 1488
Hpy166II	GTNNAC	5 cut(s)	28, 339, 527, 828, 1781
Hpy188I	TCNGA	9 cut(s)	17, 103, 228, 240, 1095, 1291, 1377, 1671, 1776
Hpy188III	TCNNGA	8 cut(s)	41, 561, 639, 1217, 1658, 1735, 1876, 2105
Hpy8I	GTNNAC	5 cut(s)	28, 339, 527, 828, 1781
HpyCH4III	ACNGT	4 cut(s)	495, 535, 1505, 1534
HpyF3I	CTNAG	5 cut(s)	797, 1059, 1603, 1611, 2047
HspAI	GCGC	3 cut(s)	87, 300, 1717
Kpn2I	TCCGGA	1 cut(s)	1875
Kzo9I	GATC	2 cut(s)	1597, 1654
LmnI	GCTCC	7 cut(s)	418, 757, 960, 1085, 1229, 1612, 2080
LweI	GCATC	4 cut(s)	1348, 1502, 1783, 1876
MaeI	CTAG	6 cut(s)	279, 431, 822, 927, 1200, 1448
MaeIII	GTNAC	4 cut(s)	131, 1568, 2218, 2247
MalI	GATC	2 cut(s)	1599, 1656
MboI	GATC	2 cut(s)	1597, 1654
MboII	GAAGA	9 cut(s)	227, 455, 593, 870, 1565, 1684, 1896, 2014, 2282
MfeI	CAATTG	3 cut(s)	116, 599, 1242
MhlI	GDGCHC	4 cut(s)	839, 1070, 1587, 1783
MlyI	GAGTC	2 cut(s)	14, 914
MmeI	TCCRAC	2 cut(s)	1073, 1405
Mph1103I	ATGCAT	3 cut(s)	1263, 1343, 2160
MroI	TCCGGA	1 cut(s)	1875
MroXI	GAANNNNTTC	1 cut(s)	1676
MseI	TTAA	7 cut(s)	173, 372, 1565, 1698, 2039, 2088, 2229
MspA1I	CMGCKG	2 cut(s)	452, 1019
MspI	CCGG	3 cut(s)	761, 1876, 2258
MspR9I	CCNGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
MunI	CAATTG	3 cut(s)	116, 599, 1242
MvaI	CCWGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
MvnI	CGCG	1 cut(s)	42
NcoI	CCATGG	2 cut(s)	1011, 1106
NdeI	CATATG	2 cut(s)	412, 1713
NdeII	GATC	2 cut(s)	1597, 1654
NlaIV	GGNNCC	2 cut(s)	291, 1352
NmeAIII	GCCGAG	1 cut(s)	115
NmuCI	GTSAC	1 cut(s)	2218
NruI	TCGCGA	1 cut(s)	42
NsbI	TGCGCA	1 cut(s)	1718
NsiI	ATGCAT	3 cut(s)	1263, 1343, 2160
NspI	RCATGY	5 cut(s)	1265, 1345, 1943, 2123, 2158
NspV	TTCGAA	1 cut(s)	886
PaeI	GCATGC	3 cut(s)	1265, 1943, 2123
PagI	TCATGA	2 cut(s)	1657, 1734
PdmI	GAANNNNTTC	1 cut(s)	1676
PfeI	GAWTC	4 cut(s)	232, 944, 1157, 2005
PleI	GAGTC	2 cut(s)	14, 913
PpsI	GAGTC	2 cut(s)	14, 913
PshBI	ATTAAT	1 cut(s)	2039
PsiI	TTATAA	2 cut(s)	1806, 2142
Psp124BI	GAGCTC	2 cut(s)	839, 1587
Psp6I	CCWGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
PspFI	CCCAGC	1 cut(s)	1407
PspGI	CCWGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
PspN4I	GGNNCC	2 cut(s)	291, 1352
PspPI	GGNCC	2 cut(s)	1110, 1470
PsrI	GAACNNNNNNTAC	2 cut(s)	1021, 1053
PvuII	CAGCTG	2 cut(s)	452, 1019
RruI	TCGCGA	1 cut(s)	42
RsaI	GTAC	5 cut(s)	497, 808, 1346, 1413, 2256
RsaNI	GTAC	5 cut(s)	496, 807, 1345, 1412, 2255
SacI	GAGCTC	2 cut(s)	839, 1587
SaqAI	TTAA	7 cut(s)	173, 372, 1565, 1698, 2039, 2088, 2229
Sau3AI	GATC	2 cut(s)	1597, 1654
Sau96I	GGNCC	2 cut(s)	1110, 1470
SchI	GAGTC	2 cut(s)	14, 914
ScrFI	CCNGG	5 cut(s)	1355, 1421, 1574, 1742, 1813
SduI	GDGCHC	4 cut(s)	839, 1070, 1587, 1783
SfaNI	GCATC	4 cut(s)	1348, 1502, 1783, 1876
SfcI	CTRYAG	5 cut(s)	387, 1071, 1530, 1639, 2279
SfuI	TTCGAA	1 cut(s)	886
SpeI	ACTAGT	1 cut(s)	1199
SphI	GCATGC	3 cut(s)	1265, 1943, 2123
SsiI	CCGC	4 cut(s)	55, 159, 758, 2146
SspI	AATATT	2 cut(s)	1296, 2096
SspMI	CTAG	6 cut(s)	279, 431, 822, 927, 1200, 1448
SstI	GAGCTC	2 cut(s)	839, 1587
StyD4I	CCNGG	5 cut(s)	1353, 1419, 1572, 1740, 1811
StyI	CCWWGG	3 cut(s)	821, 1011, 1106
TaaI	ACNGT	4 cut(s)	495, 535, 1505, 1534
TaqI	TCGA	4 cut(s)	886, 916, 1152, 1486
TatI	WGTACW	1 cut(s)	1344
TauI	GCSGC	2 cut(s)	161, 2149
TfiI	GAWTC	4 cut(s)	232, 944, 1157, 2005
Tru1I	TTAA	7 cut(s)	173, 372, 1565, 1698, 2039, 2088, 2229
Tru9I	TTAA	7 cut(s)	173, 372, 1565, 1698, 2039, 2088, 2229
TscAI	CASTG	2 cut(s)	1368, 2227
TseFI	GTSAC	1 cut(s)	2218
Tsp45I	GTSAC	1 cut(s)	2218
TspGWI	ACGGA	2 cut(s)	13, 1153
TspRI	CASTG	2 cut(s)	1368, 2227
VneI	GTGCAC	1 cut(s)	1779
VspI	ATTAAT	1 cut(s)	2039
XapI	RAATTY	4 cut(s)	109, 643, 1675, 1705
XceI	RCATGY	5 cut(s)	1265, 1345, 1943, 2123, 2158
XmaJI	CCTAGG	1 cut(s)	821
XmiI	GTMKAC	1 cut(s)	338
XmnI	GAANNNNTTC	1 cut(s)	1676
XspI	CTAG	6 cut(s)	279, 431, 822, 927, 1200, 1448
Zsp2I	ATGCAT	3 cut(s)	1263, 1343, 2160

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.