Lycopene epsilon cyclase
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| Species | Orthologous Gene IDs |
|---|---|
| arabidopsis_thaliana | AT5G57030 |
| fragaria_vesca | FvH4_1g07950 |
| malus_domestica | MD02G1083500.v1.1 |
| prunus_persica | Prupe.7G205600_v2.0.a1 |
| pyrus_communis | pycom02g06600 |
| rosa_chinensis | RchiOBHm_Chr2g0093831 |
| rosa_laevigata | RLG00000016440 |
| rosa_multiflora | Rmu_co8073952.1_g000001 Rmu_sc0003027.1_g000016 Rmu_sc0006488.1_g000001 Rmu_sc0017523.1_g000003 |
| rosa_roxburghii | Rroxscaffold_2G00147770 |
| rosa_rugosa | Rorug02G0040100 |
| rosa_samantha | Rh2AG086700 Rh2AG086800 Rh2BG087100 Rh2CG089500 Rh2DG085200 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB1I | GGYRCC | 1 cut(s) | 1136 |
| AccII | CGCG | 1 cut(s) | 1487 |
| AccIII | TCCGGA | 1 cut(s) | 1559 |
| AciI | CCGC | 9 cut(s) | 162, 194, 219, 222, 299, 1140, 1261, 1316, 1417 |
| AclI | AACGTT | 1 cut(s) | 917 |
| AclWI | GGATC | 3 cut(s) | 426, 833, 1547 |
| AcoI | YGGCCR | 2 cut(s) | 691, 1313 |
| AcsI | RAATTY | 1 cut(s) | 458 |
| AcyI | GRCGYC | 1 cut(s) | 26 |
| AfaI | GTAC | 4 cut(s) | 629, 764, 1155, 1626 |
| AfeI | AGCGCT | 1 cut(s) | 1362 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 1094, 1166, 1434, 1601 |
| AgsI | TTSAA | 7 cut(s) | 245, 463, 479, 639, 659, 1009, 1234 |
| AjnI | CCWGG | 2 cut(s) | 41, 1427 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 1195, 1227 |
| AleI | CACNNNNGTG | 1 cut(s) | 512 |
| AluBI | AGCT | 7 cut(s) | 283, 295, 595, 662, 740, 754, 1018 |
| AluI | AGCT | 7 cut(s) | 283, 295, 595, 662, 740, 754, 1018 |
| Alw21I | GWGCWC | 1 cut(s) | 597 |
| Alw26I | GTCTC | 3 cut(s) | 570, 864, 945 |
| AlwI | GGATC | 3 cut(s) | 426, 833, 1547 |
| AlwNI | CAGNNNCTG | 1 cut(s) | 740 |
| Aor13HI | TCCGGA | 1 cut(s) | 1559 |
| Aor51HI | AGCGCT | 1 cut(s) | 1362 |
| AoxI | GGCC | 5 cut(s) | 224, 412, 691, 1251, 1313 |
| ApeKI | GCWGC | 7 cut(s) | 14, 127, 250, 371, 740, 1142, 1263 |
| ApoI | RAATTY | 1 cut(s) | 458 |
| AspLEI | GCGC | 1 cut(s) | 1363 |
| AspS9I | GGNCC | 6 cut(s) | 86, 224, 350, 413, 535, 776 |
| AsuC2I | CCSGG | 1 cut(s) | 416 |
| AsuHPI | GGTGA | 4 cut(s) | 61, 190, 349, 1250 |
| AsuNHI | GCTAGC | 2 cut(s) | 662, 1294 |
| AvaII | GGWCC | 4 cut(s) | 86, 350, 535, 776 |
| BalI | TGGCCA | 1 cut(s) | 693 |
| BanI | GGYRCC | 1 cut(s) | 1136 |
| BanII | GRGCYC | 1 cut(s) | 597 |
| Bbv12I | GWGCWC | 1 cut(s) | 597 |
| BbvI | GCAGC | 7 cut(s) | 26, 114, 262, 358, 727, 1129, 1275 |
| BccI | CCATC | 1 cut(s) | 844 |
| BceAI | ACGGC | 1 cut(s) | 39 |
| BciT130I | CCWGG | 2 cut(s) | 43, 1429 |
| BciVI | GTATCC | 1 cut(s) | 694 |
| BcnI | CCSGG | 1 cut(s) | 416 |
| BcoDI | GTCTC | 3 cut(s) | 570, 864, 945 |
| BfaI | CTAG | 5 cut(s) | 663, 948, 1127, 1295, 1358 |
| BfmI | CTRYAG | 1 cut(s) | 372 |
| BfoI | RGCGCY | 1 cut(s) | 1364 |
| BfuI | GTATCC | 1 cut(s) | 694 |
| BglII | AGATCT | 1 cut(s) | 466 |
| Bme1390I | CCNGG | 3 cut(s) | 43, 416, 1429 |
| Bme18I | GGWCC | 4 cut(s) | 86, 350, 535, 776 |
| BmgT120I | GGNCC | 6 cut(s) | 86, 224, 350, 413, 535, 776 |
| BmiI | GGNNCC | 5 cut(s) | 537, 1099, 1138, 1200, 1564 |
| BmrFI | CCNGG | 3 cut(s) | 43, 416, 1429 |
| BmsI | GCATC | 3 cut(s) | 740, 1281, 1398 |
| BmtI | GCTAGC | 2 cut(s) | 666, 1298 |
| BplI | GAGNNNNNCTC | 2 cut(s) | 1271, 1303 |
| BpmI | CTGGAG | 1 cut(s) | 64 |
| BpuEI | CTTGAG | 2 cut(s) | 619, 1540 |
| BpuMI | CCSGG | 1 cut(s) | 416 |
| Bsa29I | ATCGAT | 1 cut(s) | 549 |
| BsaHI | GRCGYC | 1 cut(s) | 26 |
| BsaJI | CCNNGG | 2 cut(s) | 1447, 1464 |
| BsaWI | WCCGGW | 3 cut(s) | 96, 1087, 1559 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 54, 84, 260, 290 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 1094, 1166, 1434, 1601 |
| Bse1I | ACTGG | 1 cut(s) | 308 |
| Bse3DI | GCAATG | 2 cut(s) | 24, 673 |
| BseAI | TCCGGA | 1 cut(s) | 1559 |
| BseBI | CCWGG | 2 cut(s) | 43, 1429 |
| BseCI | ATCGAT | 1 cut(s) | 549 |
| BseDI | CCNNGG | 2 cut(s) | 1447, 1464 |
| BseGI | GGATG | 4 cut(s) | 460, 1156, 1437, 1476 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 1094, 1166, 1434, 1601 |
| BseMI | GCAATG | 2 cut(s) | 24, 673 |
| BseNI | ACTGG | 1 cut(s) | 308 |
| BseRI | GAGGAG | 4 cut(s) | 67, 75, 215, 605 |
| BseXI | GCAGC | 7 cut(s) | 26, 114, 262, 358, 727, 1129, 1275 |
| BsgI | GTGCAG | 2 cut(s) | 165, 733 |
| Bsh1236I | CGCG | 1 cut(s) | 1487 |
| Bsh1285I | CGRYCG | 1 cut(s) | 553 |
| BshFI | GGCC | 5 cut(s) | 226, 414, 693, 1253, 1315 |
| BshNI | GGYRCC | 1 cut(s) | 1136 |
| BshVI | ATCGAT | 1 cut(s) | 549 |
| BsiEI | CGRYCG | 1 cut(s) | 553 |
| BsiHKAI | GWGCWC | 1 cut(s) | 597 |
| BsiSI | CCGG | 7 cut(s) | 97, 227, 353, 416, 1088, 1560, 1602 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 1094, 1166, 1434, 1601 |
| BsmAI | GTCTC | 3 cut(s) | 570, 864, 945 |
| BsnI | GGCC | 5 cut(s) | 226, 414, 693, 1253, 1315 |
| Bsp1286I | GDGCHC | 1 cut(s) | 597 |
| Bsp13I | TCCGGA | 1 cut(s) | 1559 |
| Bsp143I | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| BspACI | CCGC | 9 cut(s) | 162, 194, 219, 222, 299, 1140, 1261, 1316, 1417 |
| BspANI | GGCC | 5 cut(s) | 226, 414, 693, 1253, 1315 |
| BspDI | ATCGAT | 1 cut(s) | 549 |
| BspEI | TCCGGA | 1 cut(s) | 1559 |
| BspFNI | CGCG | 1 cut(s) | 1487 |
| BspHI | TCATGA | 1 cut(s) | 210 |
| BspLI | GGNNCC | 5 cut(s) | 537, 1099, 1138, 1200, 1564 |
| BspMAI | CTGCAG | 1 cut(s) | 376 |
| BspOI | GCTAGC | 2 cut(s) | 666, 1298 |
| BspPI | GGATC | 3 cut(s) | 426, 833, 1547 |
| BspT107I | GGYRCC | 1 cut(s) | 1136 |
| BsrDI | GCAATG | 2 cut(s) | 24, 673 |
| BsrI | ACTGG | 1 cut(s) | 308 |
| BssECI | CCNNGG | 2 cut(s) | 1447, 1464 |
| BssMI | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| BssNI | GRCGYC | 1 cut(s) | 26 |
| Bst2UI | CCWGG | 2 cut(s) | 43, 1429 |
| Bst4CI | ACNGT | 3 cut(s) | 727, 1029, 1617 |
| Bst6I | CTCTTC | 2 cut(s) | 52, 1062 |
| BstACI | GRCGYC | 1 cut(s) | 26 |
| BstAPI | GCANNNNNTGC | 2 cut(s) | 362, 1136 |
| BstC8I | GCNNGC | 7 cut(s) | 224, 285, 664, 716, 720, 1147, 1296 |
| BstDEI | CTNAG | 1 cut(s) | 238 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| BstF5I | GGATG | 4 cut(s) | 460, 1156, 1437, 1476 |
| BstFNI | CGCG | 1 cut(s) | 1487 |
| BstH2I | RGCGCY | 1 cut(s) | 1364 |
| BstHHI | GCGC | 1 cut(s) | 1363 |
| BstKTI | GATC | 9 cut(s) | 421, 469, 549, 553, 841, 1243, 1340, 1474, 1555 |
| BstMAI | GTCTC | 3 cut(s) | 570, 864, 945 |
| BstMBI | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| BstMCI | CGRYCG | 1 cut(s) | 553 |
| BstNI | CCWGG | 2 cut(s) | 43, 1429 |
| BstNSI | RCATGY | 2 cut(s) | 497, 583 |
| BstSCI | CCNGG | 3 cut(s) | 41, 414, 1427 |
| BstSFI | CTRYAG | 1 cut(s) | 372 |
| BstUI | CGCG | 1 cut(s) | 1487 |
| BstV1I | GCAGC | 7 cut(s) | 26, 114, 262, 358, 727, 1129, 1275 |
| BstX2I | RGATCY | 2 cut(s) | 418, 466 |
| BstYI | RGATCY | 2 cut(s) | 418, 466 |
| Bsu15I | ATCGAT | 1 cut(s) | 549 |
| BsuI | GTATCC | 1 cut(s) | 694 |
| BsuRI | GGCC | 5 cut(s) | 226, 414, 693, 1253, 1315 |
| BsuTUI | ATCGAT | 1 cut(s) | 549 |
| BtsCI | GGATG | 4 cut(s) | 460, 1156, 1437, 1476 |
| Cac8I | GCNNGC | 7 cut(s) | 224, 285, 664, 716, 720, 1147, 1296 |
| CaiI | CAGNNNCTG | 1 cut(s) | 740 |
| CciI | TCATGA | 1 cut(s) | 210 |
| CfoI | GCGC | 1 cut(s) | 1363 |
| Cfr13I | GGNCC | 6 cut(s) | 86, 224, 350, 413, 535, 776 |
| ClaI | ATCGAT | 1 cut(s) | 549 |
| CseI | GACGC | 1 cut(s) | 15 |
| Csp6I | GTAC | 4 cut(s) | 628, 763, 1154, 1625 |
| CviQI | GTAC | 4 cut(s) | 628, 763, 1154, 1625 |
| DdeI | CTNAG | 1 cut(s) | 238 |
| DpnI | GATC | 9 cut(s) | 420, 468, 548, 552, 840, 1242, 1339, 1473, 1554 |
| DpnII | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| EaeI | YGGCCR | 2 cut(s) | 691, 1313 |
| Eam1104I | CTCTTC | 2 cut(s) | 52, 1062 |
| EarI | CTCTTC | 2 cut(s) | 52, 1062 |
| Ecl136II | GAGCTC | 1 cut(s) | 595 |
| Eco24I | GRGCYC | 1 cut(s) | 597 |
| Eco47I | GGWCC | 4 cut(s) | 86, 350, 535, 776 |
| Eco47III | AGCGCT | 1 cut(s) | 1362 |
| Eco53kI | GAGCTC | 1 cut(s) | 595 |
| EcoICRI | GAGCTC | 1 cut(s) | 595 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| EcoO109I | RGGNCCY | 1 cut(s) | 86 |
| EcoRI | GAATTC | 1 cut(s) | 458 |
| EcoRII | CCWGG | 2 cut(s) | 41, 1427 |
| EcoT38I | GRGCYC | 1 cut(s) | 597 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 390, 422 |
| FauI | CCCGC | 1 cut(s) | 215 |
| FauNDI | CATATG | 2 cut(s) | 802, 835 |
| FokI | GGATG | 4 cut(s) | 467, 1143, 1444, 1463 |
| FriOI | GRGCYC | 1 cut(s) | 597 |
| FspBI | CTAG | 5 cut(s) | 663, 948, 1127, 1295, 1358 |
| GlaI | GCGC | 1 cut(s) | 1362 |
| GsuI | CTGGAG | 1 cut(s) | 64 |
| HaeII | RGCGCY | 1 cut(s) | 1364 |
| HaeIII | GGCC | 5 cut(s) | 226, 414, 693, 1253, 1315 |
| HapII | CCGG | 7 cut(s) | 97, 227, 353, 416, 1088, 1560, 1602 |
| HgaI | GACGC | 1 cut(s) | 15 |
| HhaI | GCGC | 1 cut(s) | 1363 |
| Hin1I | GRCGYC | 1 cut(s) | 26 |
| Hin6I | GCGC | 1 cut(s) | 1361 |
| HinP1I | GCGC | 1 cut(s) | 1361 |
| HindIII | AAGCTT | 1 cut(s) | 752 |
| HinfI | GANTC | 6 cut(s) | 377, 530, 614, 635, 1044, 1084 |
| HpaII | CCGG | 7 cut(s) | 97, 227, 353, 416, 1088, 1560, 1602 |
| HphI | GGTGA | 4 cut(s) | 61, 190, 349, 1250 |
| Hpy188I | TCNGA | 6 cut(s) | 535, 945, 1195, 1355, 1538, 1552 |
| Hpy99I | CGWCG | 1 cut(s) | 31 |
| HpyAV | CCTTC | 6 cut(s) | 77, 149, 175, 208, 473, 1566 |
| HpyCH4III | ACNGT | 3 cut(s) | 727, 1029, 1617 |
| HpyCH4IV | ACGT | 1 cut(s) | 917 |
| HpyF3I | CTNAG | 1 cut(s) | 238 |
| HpySE526I | ACGT | 1 cut(s) | 917 |
| Hsp92I | GRCGYC | 1 cut(s) | 26 |
| HspAI | GCGC | 1 cut(s) | 1361 |
| Kpn2I | TCCGGA | 1 cut(s) | 1559 |
| Kzo9I | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| LmnI | GCTCC | 4 cut(s) | 592, 737, 1204, 1562 |
| Lsp1109I | GCAGC | 7 cut(s) | 26, 114, 262, 358, 727, 1129, 1275 |
| LweI | GCATC | 3 cut(s) | 740, 1281, 1398 |
| MaeI | CTAG | 5 cut(s) | 663, 948, 1127, 1295, 1358 |
| MaeII | ACGT | 1 cut(s) | 917 |
| MaeIII | GTNAC | 2 cut(s) | 1023, 1029 |
| MalI | GATC | 9 cut(s) | 420, 468, 548, 552, 840, 1242, 1339, 1473, 1554 |
| MboI | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| MboII | GAAGA | 5 cut(s) | 69, 197, 1021, 1079, 1405 |
| MflI | RGATCY | 2 cut(s) | 418, 466 |
| MhlI | GDGCHC | 1 cut(s) | 597 |
| MlsI | TGGCCA | 1 cut(s) | 693 |
| MluCI | AATT | 2 cut(s) | 458, 1224 |
| MluNI | TGGCCA | 1 cut(s) | 693 |
| MlyI | GAGTC | 1 cut(s) | 623 |
| MmeI | TCCRAC | 3 cut(s) | 938, 968, 1173 |
| Mox20I | TGGCCA | 1 cut(s) | 693 |
| MroI | TCCGGA | 1 cut(s) | 1559 |
| MscI | TGGCCA | 1 cut(s) | 693 |
| MseI | TTAA | 1 cut(s) | 395 |
| MslI | CAYNNNNRTG | 4 cut(s) | 512, 935, 1289, 1430 |
| Msp20I | TGGCCA | 1 cut(s) | 693 |
| MspA1I | CMGCKG | 1 cut(s) | 1142 |
| MspI | CCGG | 7 cut(s) | 97, 227, 353, 416, 1088, 1560, 1602 |
| MspR9I | CCNGG | 3 cut(s) | 43, 416, 1429 |
| MvaI | CCWGG | 2 cut(s) | 43, 1429 |
| MvnI | CGCG | 1 cut(s) | 1487 |
| NciI | CCSGG | 1 cut(s) | 416 |
| NdeI | CATATG | 2 cut(s) | 802, 835 |
| NdeII | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| NheI | GCTAGC | 2 cut(s) | 662, 1294 |
| NlaIV | GGNNCC | 5 cut(s) | 537, 1099, 1138, 1200, 1564 |
| NmeAIII | GCCGAG | 2 cut(s) | 1428, 1445 |
| NmuCI | GTSAC | 1 cut(s) | 1023 |
| NspI | RCATGY | 2 cut(s) | 497, 583 |
| OliI | CACNNNNGTG | 1 cut(s) | 512 |
| PagI | TCATGA | 1 cut(s) | 210 |
| PcsI | WCGNNNNNNNCGW | 3 cut(s) | 35, 571, 1295 |
| PfeI | GAWTC | 5 cut(s) | 377, 530, 635, 1044, 1084 |
| PflFI | GACNNNGTC | 1 cut(s) | 25 |
| Ple19I | CGATCG | 1 cut(s) | 553 |
| PleI | GAGTC | 1 cut(s) | 622 |
| PpsI | GAGTC | 1 cut(s) | 622 |
| PpuMI | RGGWCCY | 1 cut(s) | 86 |
| Psp124BI | GAGCTC | 1 cut(s) | 597 |
| Psp1406I | AACGTT | 1 cut(s) | 917 |
| Psp5II | RGGWCCY | 1 cut(s) | 86 |
| Psp6I | CCWGG | 2 cut(s) | 41, 1427 |
| PspGI | CCWGG | 2 cut(s) | 41, 1427 |
| PspN4I | GGNNCC | 5 cut(s) | 537, 1099, 1138, 1200, 1564 |
| PspPI | GGNCC | 6 cut(s) | 86, 224, 350, 413, 535, 776 |
| PspPPI | RGGWCCY | 1 cut(s) | 86 |
| PstI | CTGCAG | 1 cut(s) | 376 |
| PstNI | CAGNNNCTG | 1 cut(s) | 740 |
| PsuI | RGATCY | 2 cut(s) | 418, 466 |
| PsyI | GACNNNGTC | 1 cut(s) | 25 |
| PvuI | CGATCG | 1 cut(s) | 553 |
| RsaI | GTAC | 4 cut(s) | 629, 764, 1155, 1626 |
| RsaNI | GTAC | 4 cut(s) | 628, 763, 1154, 1625 |
| RseI | CAYNNNNRTG | 4 cut(s) | 512, 935, 1289, 1430 |
| SacI | GAGCTC | 1 cut(s) | 597 |
| SaqAI | TTAA | 1 cut(s) | 395 |
| Sau3AI | GATC | 9 cut(s) | 418, 466, 546, 550, 838, 1240, 1337, 1471, 1552 |
| Sau96I | GGNCC | 6 cut(s) | 86, 224, 350, 413, 535, 776 |
| SchI | GAGTC | 1 cut(s) | 623 |
| ScrFI | CCNGG | 3 cut(s) | 43, 416, 1429 |
| SduI | GDGCHC | 1 cut(s) | 597 |
| SfaNI | GCATC | 3 cut(s) | 740, 1281, 1398 |
| SfcI | CTRYAG | 1 cut(s) | 372 |
| SinI | GGWCC | 4 cut(s) | 86, 350, 535, 776 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 512, 935, 1289, 1430 |
| SmlI | CTYRAG | 2 cut(s) | 598, 1519 |
| SmoI | CTYRAG | 2 cut(s) | 598, 1519 |
| Sse9I | AATT | 2 cut(s) | 458, 1224 |
| SsiI | CCGC | 9 cut(s) | 162, 194, 219, 222, 299, 1140, 1261, 1316, 1417 |
| SspI | AATATT | 1 cut(s) | 700 |
| SspMI | CTAG | 5 cut(s) | 663, 948, 1127, 1295, 1358 |
| SstI | GAGCTC | 1 cut(s) | 597 |
| StyD4I | CCNGG | 3 cut(s) | 41, 414, 1427 |
| TaaI | ACNGT | 3 cut(s) | 727, 1029, 1617 |
| TaiI | ACGT | 1 cut(s) | 920 |
| TaqI | TCGA | 7 cut(s) | 549, 574, 612, 633, 810, 1289, 1383 |
| TaqII | GACCGA | 1 cut(s) | 882 |
| TasI | AATT | 2 cut(s) | 458, 1224 |
| TauI | GCSGC | 3 cut(s) | 222, 1142, 1318 |
| TfiI | GAWTC | 5 cut(s) | 377, 530, 635, 1044, 1084 |
| Tru1I | TTAA | 1 cut(s) | 395 |
| Tru9I | TTAA | 1 cut(s) | 395 |
| TseFI | GTSAC | 1 cut(s) | 1023 |
| TseI | GCWGC | 7 cut(s) | 14, 127, 250, 371, 740, 1142, 1263 |
| Tsp45I | GTSAC | 1 cut(s) | 1023 |
| TspDTI | ATGAA | 5 cut(s) | 199, 227, 471, 847, 1080 |
| TspGWI | ACGGA | 1 cut(s) | 1037 |
| Tth111I | GACNNNGTC | 1 cut(s) | 25 |
| VpaK11BI | GGWCC | 4 cut(s) | 86, 350, 535, 776 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 1164 |
| XapI | RAATTY | 1 cut(s) | 458 |
| XceI | RCATGY | 2 cut(s) | 497, 583 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 800 |
| XspI | CTAG | 5 cut(s) | 663, 948, 1127, 1295, 1358 |